Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-13 08:01:14 (10532): vboxwrapper version 26210
2026-02-13 08:01:14 (10532): BOINC client version: 8.2.4
2026-02-13 08:01:14 (10532): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2026-02-13 08:01:15 (10532): Successfully copied 'init_data.xml' to the shared directory.
2026-02-13 08:01:15 (10532): Create VM. (boinc_b57be8881c3323d2, slot#8)
2026-02-13 08:01:16 (10532): Setting Memory Size for VM. (4800MB)
2026-02-13 08:01:16 (10532): Setting CPU Count for VM. (8)
2026-02-13 08:01:16 (10532): Setting Chipset Options for VM.
2026-02-13 08:01:16 (10532): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-13 08:01:17 (10532): Setting Boot Options for VM.
2026-02-13 08:01:17 (10532): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-13 08:01:17 (10532): Enabling VM Network Access.
2026-02-13 08:01:18 (10532): Disabling USB Support for VM.
2026-02-13 08:01:18 (10532): Disabling COM Port Support for VM.
2026-02-13 08:01:18 (10532): Disabling LPT Port Support for VM.
2026-02-13 08:01:19 (10532): Disabling Audio Support for VM.
2026-02-13 08:01:19 (10532): Disabling Clipboard Support for VM.
2026-02-13 08:01:19 (10532): Disabling Drag and Drop Support for VM.
2026-02-13 08:01:19 (10532): Adding storage controller(s) to VM.
2026-02-13 08:01:20 (10532): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-13 08:01:20 (10532): Adding VirtualBox Guest Additions to VM.
2026-02-13 08:01:20 (10532): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-13 08:01:21 (10532): forwarding host port 62035 to guest port 80
2026-02-13 08:01:21 (10532): Enabling remote desktop for VM.
2026-02-13 08:01:21 (10532): Enabling shared directory for VM.
2026-02-13 08:01:22 (10532): Starting VM using VBoxManage interface. (boinc_b57be8881c3323d2, slot#8)
2026-02-13 08:01:32 (10532): Successfully started VM. (PID = '6052')
2026-02-13 08:01:32 (10532): Reporting VM Process ID to BOINC.
2026-02-13 08:01:32 (10532): Guest Log: BIOS: VirtualBox 7.1.4
2026-02-13 08:01:32 (10532): Guest Log: CPUID EDX: 0x178bfbff
2026-02-13 08:01:32 (10532): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-13 08:01:32 (10532): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-13 08:01:32 (10532): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-13 08:01:32 (10532): Detected: Web Application Enabled (http://localhost:62035)
2026-02-13 08:01:32 (10532): Detected: Remote Desktop Enabled (localhost:62036)
2026-02-13 08:01:32 (10532): Preference change detected
2026-02-13 08:01:32 (10532): Setting CPU throttle for VM. (100%)
2026-02-13 08:01:32 (10532): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-13 08:01:34 (10532): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-13 08:01:34 (10532): Guest Log: BIOS: Booting from Hard Disk...
2026-02-13 08:01:37 (10532): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-13 08:01:37 (10532): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-13 08:01:37 (10532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-13 08:01:46 (10532): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-13 08:01:46 (10532): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-13 08:01:57 (10532): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-13 08:01:57 (10532): Guest Log: 00:00:00.000616 main     Log opened 2026-02-13T08:01:55.428140000Z
2026-02-13 08:01:57 (10532): Guest Log: 00:00:00.000964 main     OS Product: Linux
2026-02-13 08:01:57 (10532): Guest Log: 00:00:00.001060 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-13 08:01:57 (10532): Guest Log: 00:00:00.001137 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-13 08:01:57 (10532): Guest Log: 00:00:00.001217 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-13 08:01:57 (10532): Guest Log: 00:00:00.001219 main     Process ID: 1381
2026-02-13 08:01:57 (10532): Guest Log: 00:00:00.001221 main     Package type: LINUX_64BITS_GENERIC
2026-02-13 08:01:57 (10532): Guest Log: 00:00:00.004507 main     5.2.32 r132073 started. Verbose level = 0
2026-02-13 08:01:57 (10532): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-13 08:01:57 (10532): Guest Log: [INFO] Mounting shared directory
2026-02-13 08:01:57 (10532): Guest Log: [INFO] Checking for init_data.xml
2026-02-13 08:02:06 (10532): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-13 08:02:06 (10532): Guest Log: [INFO] Detected branch: prod
2026-02-13 08:02:06 (10532): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-13 08:02:06 (10532): Guest Log: Copying input files
2026-02-13 08:02:07 (10532): Guest Log: 00:00:10.010144 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 589 094 669 000ns (GuestNow=1 770 966 126 341 961 000 ns GuestLast=1 770 969 715 436 630 000 ns fSetTimeLastLoop=true )
2026-02-13 08:02:13 (10532): Guest Log: Copied input files into RunAtlas.
2026-02-13 08:02:13 (10532): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-13 08:02:13 (10532): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-13 08:02:13 (10532): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-13 08:02:13 (10532): Guest Log: Further information can be found at the LHC@home message board.
2026-02-13 08:03:13 (10532): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-13 08:03:13 (10532): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-13 08:03:13 (10532): Guest Log: 2.6.3.0 1677 1 32188 156185 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-13 08:03:15 (10532): Guest Log: copied the webapp to /var/www
2026-02-13 08:03:15 (10532): Guest Log: ATHENA_PROC_NUMBER=8
2026-02-13 08:03:15 (10532): Guest Log: ATHENA_CORE_NUMBER=8
2026-02-13 08:03:15 (10532): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-13 08:03:15 (10532): Guest Log:  *** Starting ATLAS job. (PandaID=7012126511 taskID=48431096) ***
2026-02-13 09:41:38 (10532): Status Report: Elapsed Time: '6000.000000'
2026-02-13 09:41:38 (10532): Status Report: CPU Time: '37439.937500'
2026-02-13 11:21:44 (10532): Status Report: Elapsed Time: '12000.000000'
2026-02-13 11:21:44 (10532): Status Report: CPU Time: '83081.046875'
2026-02-13 12:47:53 (10532): Guest Log:  *** Job finished ***
2026-02-13 12:47:53 (10532): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-13 12:47:53 (10532): Guest Log: 2026-02-13 11:47:49,964 | INFO     | PID=6123 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-02-13 12:47:53 (10532): Guest Log: 2026-02-13 11:47:49,966 | INFO     | found 0 job(s) in 20 queues
2026-02-13 12:47:53 (10532): Guest Log: 2026-02-13 11:47:49,966 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-13 12:47:53 (10532): Guest Log: 2026-02-13 11:47:49,966 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-13 12:47:53 (10532): Guest Log: 2026-02-13 11:47:49,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-13 12:47:53 (10532): Guest Log: 2026-02-13 11:47:49,966 | INFO     | [monitor] control thread has ended
2026-02-13 12:47:53 (10532): Guest Log: 2026-02-13 11:47:52,779 | INFO     | all workflow threads have been joined
2026-02-13 12:47:53 (10532): Guest Log: 2026-02-13 11:47:52,780 | INFO     | end of generic workflow (traces error code: 0)
2026-02-13 12:47:53 (10532): Guest Log: 2026-02-13 11:47:52,780 | INFO     | traces error code: 0
2026-02-13 12:47:53 (10532): Guest Log: 2026-02-13 11:47:52,781 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-13 12:47:53 (10532): Guest Log: 2026-02-13 11:47:52,953 [wrapper] ==== pilot stdout END ====
2026-02-13 12:47:53 (10532): Guest Log: 2026-02-13 11:47:52,962 [wrapper] ==== wrapper stdout RESUME ====
2026-02-13 12:47:53 (10532): Guest Log: 2026-02-13 11:47:52,974 [wrapper] pilotpid: 6123
2026-02-13 12:47:53 (10532): Guest Log: 2026-02-13 11:47:52,983 [wrapper] Pilot exit status: 0
2026-02-13 12:47:53 (10532): Guest Log: 2026-02-13 11:47:53,201 [wrapper] pandaids: 7012126511
2026-02-13 12:47:53 (10532): Guest Log: 2026-02-13 11:47:53,278 [wrapper] cleanup supervisor_pilot 29091 6124
2026-02-13 12:47:53 (10532): Guest Log: 2026-02-13 11:47:53,294 [wrapper] Test setup, not cleaning
2026-02-13 12:47:53 (10532): Guest Log: 2026-02-13 11:47:53,305 [wrapper] apfmon messages muted
2026-02-13 12:47:53 (10532): Guest Log: 2026-02-13 11:47:53,314 [wrapper] ==== wrapper stdout END ====
2026-02-13 12:47:53 (10532): Guest Log: 2026-02-13 11:47:53,322 [wrapper] ==== wrapper stderr END ====
2026-02-13 12:47:53 (10532): Guest Log:  *** Error codes and diagnostics ***
2026-02-13 12:47:53 (10532): Guest Log:     "exeErrorCode": 0,
2026-02-13 12:47:53 (10532): Guest Log:     "exeErrorDiag": "",
2026-02-13 12:47:53 (10532): Guest Log:     "pilotErrorCode": 0,
2026-02-13 12:47:53 (10532): Guest Log:     "pilotErrorDiag": "",
2026-02-13 12:47:53 (10532): Guest Log:  *** Listing of results directory ***
2026-02-13 12:47:53 (10532): Guest Log: total 285128
2026-02-13 12:47:53 (10532): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb 11 13:18 queuedata.json
2026-02-13 12:47:53 (10532): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb 11 13:18 pilot3.tar.gz
2026-02-13 12:47:53 (10532): Guest Log: -rwx------. 1 atlas atlas     36322 Feb 11 13:19 runpilot2-wrapper.sh
2026-02-13 12:47:53 (10532): Guest Log: -rwxr-xr-x. 1 atlas atlas      5973 Feb 13 07:02 init_data.xml
2026-02-13 12:47:53 (10532): Guest Log: -rwxr-xr-x. 1 atlas atlas    597963 Feb 13 07:02 input.tar.gz
2026-02-13 12:47:53 (10532): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb 13 07:02 start_atlas.sh
2026-02-13 12:47:53 (10532): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 13 07:02 EVNT.48431094._000731.pool.root.1 -> /data/./ATLAS.root_0
2026-02-13 12:47:53 (10532): Guest Log: -rw-r--r--. 1 atlas atlas      2553 Feb 13 07:03 pandaJob.out
2026-02-13 12:47:53 (10532): Guest Log: -rw-------. 1 atlas atlas   1000262 Feb 13 07:05 agis_schedconf.cvmfs.json
2026-02-13 12:47:53 (10532): Guest Log: -rw-------. 1 atlas atlas       426 Feb 13 07:05 workernode_map.json
2026-02-13 12:47:53 (10532): Guest Log: drwx------. 5 atlas atlas      4096 Feb 13 07:05 pilot3
2026-02-13 12:47:53 (10532): Guest Log: -rw-------. 1 atlas atlas 282471757 Feb 13 11:46 HITS.48431096._031158.pool.root.1
2026-02-13 12:47:53 (10532): Guest Log: -rw-------. 1 atlas atlas      1038 Feb 13 11:47 memory_monitor_summary.json
2026-02-13 12:47:53 (10532): Guest Log: -rw-------. 1 atlas atlas   1512955 Feb 13 11:47 agis_ddmendpoints.agis.ALL.json
2026-02-13 12:47:53 (10532): Guest Log: -rw-------. 1 atlas atlas    485018 Feb 13 11:47 log.48431096._031158.job.log.tgz.1
2026-02-13 12:47:53 (10532): Guest Log: -rw-------. 1 atlas atlas      6361 Feb 13 11:47 heartbeat.json
2026-02-13 12:47:53 (10532): Guest Log: -rw-------. 1 atlas atlas        95 Feb 13 11:47 pilot_heartbeat.json
2026-02-13 12:47:53 (10532): Guest Log: -rw-------. 1 atlas atlas      4873 Feb 13 11:47 pilotlog.txt
2026-02-13 12:47:53 (10532): Guest Log: -rw-------. 1 atlas atlas   2336148 Feb 13 11:47 log.48431096._031158.job.log.1
2026-02-13 12:47:53 (10532): Guest Log: -rw-------. 1 atlas atlas       357 Feb 13 11:47 output.list
2026-02-13 12:47:53 (10532): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 13 11:47 runtime_log
2026-02-13 12:47:53 (10532): Guest Log: -rw-------. 1 atlas atlas   2836480 Feb 13 11:47 result.tar.gz
2026-02-13 12:47:53 (10532): Guest Log: -rw-r--r--. 1 atlas atlas      8814 Feb 13 11:47 runtime_log.err
2026-02-13 12:47:53 (10532): Guest Log: -rw-------. 1 atlas atlas       682 Feb 13 11:47 F4JNDmaIPA9n9Rq4apOajLDm4fhM0noT9bVooX4SDmzOjKDmbolwOo.diag
2026-02-13 12:47:54 (10532): Guest Log: Looking for outputfile HITS.48431096._031158.pool.root.1
2026-02-13 12:47:54 (10532): Guest Log: HITS file was successfully produced
2026-02-13 12:47:54 (10532): Guest Log: -rw-------. 1 atlas atlas 282471757 Feb 13 11:46 /home/atlas/RunAtlas/HITS.48431096._031158.pool.root.1
2026-02-13 12:47:56 (10532): Guest Log: Successfully finished the ATLAS job!
2026-02-13 12:47:56 (10532): Guest Log: Copying the results back to the shared directory!
2026-02-13 12:47:56 (10532): Guest Log:  *** Contents of shared directory: ***
2026-02-13 12:47:56 (10532): Guest Log: total 938692
2026-02-13 12:47:56 (10532): Guest Log: -rwxrwxrwx. 1 root root 675286234 Feb 13 07:01 ATLAS.root_0
2026-02-13 12:47:56 (10532): Guest Log: -rwxrwxrwx. 1 root root 282471757 Feb 13 11:47 HITS.pool.root.1
2026-02-13 12:47:56 (10532): Guest Log: -rwxrwxrwx. 1 root root      5973 Feb 13 07:01 init_data.xml
2026-02-13 12:47:56 (10532): Guest Log: -rwxrwxrwx. 1 root root    597963 Feb 11 18:01 input.tar.gz
2026-02-13 12:47:56 (10532): Guest Log: -rwxrwxrwx. 1 root root   2836480 Feb 13 11:47 result.tar.gz
2026-02-13 12:47:56 (10532): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb 11 18:01 start_atlas.sh
2026-02-13 12:47:56 (10532): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-13 12:47:57 (10532): VM Completion File Detected.
2026-02-13 12:47:57 (10532): Powering off VM.
2026-02-13 12:47:58 (10532): Successfully stopped VM.
2026-02-13 12:47:58 (10532): Deregistering VM. (boinc_b57be8881c3323d2, slot#8)
2026-02-13 12:47:58 (10532): Removing network bandwidth throttle group from VM.
2026-02-13 12:47:59 (10532): Removing VM from VirtualBox.
2026-02-13 12:48:04 (10532): called boinc_finish(0)

</stderr_txt>
]]>

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