Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:20:17 (12828): wrapper (7.7.26015): starting
04:20:17 (12828): wrapper: running run_atlas (--nthreads 8)
[2026-02-12 04:20:17] Arguments: --nthreads 8
[2026-02-12 04:20:17] Threads: 8
[2026-02-12 04:20:17] Checking for CVMFS
[2026-02-12 04:20:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 04:20:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 04:20:20] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 04:20:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 04:20:21] 2.11.2.0 15872 47950 108644 156138 1 53 19223336 25165824 4784 130560 0 16296033 99.861 10348081 3078 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-12 04:20:21] CVMFS is ok
[2026-02-12 04:20:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 04:20:21] Checking for apptainer binary...
[2026-02-12 04:20:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 04:20:21] Running /usr/bin/apptainer --version
[2026-02-12 04:20:22] apptainer version 1.3.2-1.el7
[2026-02-12 04:20:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 04:20:38] cg-vwn496.simple-grid.lan
[2026-02-12 04:20:38] apptainer works
[2026-02-12 04:20:38] Set ATHENA_PROC_NUMBER=8
[2026-02-12 04:20:38] Set ATHENA_CORE_NUMBER=8
[2026-02-12 04:20:38] Starting ATLAS job with PandaID=7008629802
[2026-02-12 04:20:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 08:43:31]  *** The last 200 lines of the pilot log: ***
[2026-02-12 08:43:32] 2026-02-12 07:42:27,653 | INFO     | job 7008629802 has finished - writing final server update
[2026-02-12 08:43:32] 2026-02-12 07:42:27,654 | INFO     | total number of processed events: 400 (read)
[2026-02-12 08:43:32] 2026-02-12 07:42:27,656 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-7008629802/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 08:43:32] 2026-02-12 07:42:27,656 | INFO     | extracted standard info from prmon json
[2026-02-12 08:43:32] 2026-02-12 07:42:27,657 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 08:43:32] 2026-02-12 07:42:27,657 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 08:43:32] 2026-02-12 07:42:27,657 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 08:43:32] 2026-02-12 07:42:27,657 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 08:43:32] 2026-02-12 07:42:27,662 | INFO     | fitting pss+swap vs Time
[2026-02-12 08:43:32] 2026-02-12 07:42:27,663 | INFO     | sum of square deviations: 4729621702.0
[2026-02-12 08:43:32] 2026-02-12 07:42:27,665 | INFO     | sum of deviations: 69843258236.5
[2026-02-12 08:43:32] 2026-02-12 07:42:27,665 | INFO     | mean x: 1770874559.5
[2026-02-12 08:43:32] 2026-02-12 07:42:27,665 | INFO     | mean y: 2464337.455645161
[2026-02-12 08:43:32] 2026-02-12 07:42:27,666 | INFO     | intersect: -26148390203.681328
[2026-02-12 08:43:32] 2026-02-12 07:42:27,666 | INFO     | chi2: 6.8811014341585475
[2026-02-12 08:43:32] 2026-02-12 07:42:27,666 | INFO     | sum of square deviations: 4449281562.0
[2026-02-12 08:43:32] 2026-02-12 07:42:27,668 | INFO     | sum of deviations: 84907725546.99998
[2026-02-12 08:43:32] 2026-02-12 07:42:27,669 | INFO     | mean x: 1770874407.0
[2026-02-12 08:43:32] 2026-02-12 07:42:27,669 | INFO     | mean y: 2472385.609053498
[2026-02-12 08:43:32] 2026-02-12 07:42:27,669 | INFO     | intersect: -33791953980.20033
[2026-02-12 08:43:32] 2026-02-12 07:42:27,669 | INFO     | chi2: 6.16984301897404
[2026-02-12 08:43:32] 2026-02-12 07:42:27,669 | INFO     | current chi2=6.16984301897404 (change=10.336403582916855 %)
[2026-02-12 08:43:32] 2026-02-12 07:42:27,670 | INFO     | right removable region: 242
[2026-02-12 08:43:32] 2026-02-12 07:42:27,670 | INFO     | sum of square deviations: 4449281562.0
[2026-02-12 08:43:32] 2026-02-12 07:42:27,672 | INFO     | sum of deviations: -14426678729.999996
[2026-02-12 08:43:32] 2026-02-12 07:42:27,672 | INFO     | mean x: 1770874712.0
[2026-02-12 08:43:32] 2026-02-12 07:42:27,672 | INFO     | mean y: 2510141.1275720163
[2026-02-12 08:43:32] 2026-02-12 07:42:27,673 | INFO     | intersect: 5744524932.751872
[2026-02-12 08:43:32] 2026-02-12 07:42:27,673 | INFO     | chi2: 2.3125618185381596
[2026-02-12 08:43:32] 2026-02-12 07:42:27,673 | INFO     | current chi2=2.3125618185381596 (change=66.39256315771851 %)
[2026-02-12 08:43:32] 2026-02-12 07:42:27,674 | INFO     | sum of square deviations: 4180243959.5
[2026-02-12 08:43:32] 2026-02-12 07:42:27,675 | INFO     | sum of deviations: -55302792912.5
[2026-02-12 08:43:32] 2026-02-12 07:42:27,676 | INFO     | mean x: 1770874864.5
[2026-02-12 08:43:32] 2026-02-12 07:42:27,676 | INFO     | mean y: 2533166.1218487397
[2026-02-12 08:43:32] 2026-02-12 07:42:27,676 | INFO     | intersect: 23430430402.317833
[2026-02-12 08:43:32] 2026-02-12 07:42:27,676 | INFO     | chi2: 0.9802302025125809
[2026-02-12 08:43:32] 2026-02-12 07:42:27,676 | INFO     | current chi2=0.9802302025125809 (change=57.61280002745119 %)
[2026-02-12 08:43:32] 2026-02-12 07:42:27,677 | INFO     | sum of square deviations: 3922276332.0
[2026-02-12 08:43:32] 2026-02-12 07:42:27,679 | INFO     | sum of deviations: -52841977363.99999
[2026-02-12 08:43:32] 2026-02-12 07:42:27,679 | INFO     | mean x: 1770875017.0
[2026-02-12 08:43:32] 2026-02-12 07:42:27,679 | INFO     | mean y: 2531676.763948498
[2026-02-12 08:43:32] 2026-02-12 07:42:27,679 | INFO     | intersect: 23860243281.461544
[2026-02-12 08:43:32] 2026-02-12 07:42:27,680 | INFO     | chi2: 0.9636083509375307
[2026-02-12 08:43:32] 2026-02-12 07:42:27,680 | INFO     | current chi2=0.9636083509375307 (change=1.6957089806500636 %)
[2026-02-12 08:43:32] 2026-02-12 07:42:27,680 | INFO     | left removable region: 30
[2026-02-12 08:43:32] 2026-02-12 07:42:27,680 | INFO     | sum of square deviations: 2954447953.0
[2026-02-12 08:43:32] 2026-02-12 07:42:27,682 | INFO     | sum of deviations: -12598801407.999998
[2026-02-12 08:43:32] 2026-02-12 07:42:27,682 | INFO     | mean x: 1770875291.5
[2026-02-12 08:43:32] 2026-02-12 07:42:27,682 | INFO     | mean y: 2525782.5849056602
[2026-02-12 08:43:32] 2026-02-12 07:42:27,682 | INFO     | intersect: 7554158598.890811
[2026-02-12 08:43:32] 2026-02-12 07:42:27,683 | INFO     | chi2: 0.09955077303725413
[2026-02-12 08:43:32] 2026-02-12 07:42:27,683 | INFO     | current memory leak: -4.26 B/s (using 212 data points, chi2=0.10)
[2026-02-12 08:43:32] 2026-02-12 07:42:27,683 | INFO     | could have reported an average CPU frequency of 2249 MHz (12 samples)
[2026-02-12 08:43:32] 2026-02-12 07:42:27,684 | INFO     | ..............................
[2026-02-12 08:43:32] 2026-02-12 07:42:27,684 | INFO     | . Timing measurements:
[2026-02-12 08:43:32] 2026-02-12 07:42:27,684 | INFO     | . get job = 0 s
[2026-02-12 08:43:32] 2026-02-12 07:42:27,684 | INFO     | . initial setup = 95 s
[2026-02-12 08:43:32] 2026-02-12 07:42:27,684 | INFO     | . payload setup = 136 s
[2026-02-12 08:43:32] 2026-02-12 07:42:27,684 | INFO     | . stage-in = 0 s
[2026-02-12 08:43:32] 2026-02-12 07:42:27,684 | INFO     | . payload execution = 15233 s
[2026-02-12 08:43:32] 2026-02-12 07:42:27,684 | INFO     | . stage-out = 3 s
[2026-02-12 08:43:32] 2026-02-12 07:42:27,684 | INFO     | . log creation = 1 s
[2026-02-12 08:43:32] 2026-02-12 07:42:27,685 | INFO     | ..............................
[2026-02-12 08:43:32] 2026-02-12 07:42:27,807 | INFO     | 
[2026-02-12 08:43:32] 2026-02-12 07:42:27,807 | INFO     | job summary report
[2026-02-12 08:43:32] 2026-02-12 07:42:27,807 | INFO     | --------------------------------------------------
[2026-02-12 08:43:32] 2026-02-12 07:42:27,807 | INFO     | PanDA job id: 7008629802
[2026-02-12 08:43:32] 2026-02-12 07:42:27,807 | INFO     | task id: 48318018
[2026-02-12 08:43:32] 2026-02-12 07:42:27,807 | INFO     | errors: (none)
[2026-02-12 08:43:32] 2026-02-12 07:42:27,807 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 08:43:32] 2026-02-12 07:42:27,808 | INFO     | pilot state: finished 
[2026-02-12 08:43:32] 2026-02-12 07:42:27,808 | INFO     | transexitcode: 0
[2026-02-12 08:43:32] 2026-02-12 07:42:27,808 | INFO     | exeerrorcode: 0
[2026-02-12 08:43:32] 2026-02-12 07:42:27,808 | INFO     | exeerrordiag: 
[2026-02-12 08:43:32] 2026-02-12 07:42:27,808 | INFO     | exitcode: 0
[2026-02-12 08:43:32] 2026-02-12 07:42:27,808 | INFO     | exitmsg: OK
[2026-02-12 08:43:32] 2026-02-12 07:42:27,808 | INFO     | cpuconsumptiontime: 58689 s
[2026-02-12 08:43:32] 2026-02-12 07:42:27,808 | INFO     | nevents: 400
[2026-02-12 08:43:32] 2026-02-12 07:42:27,808 | INFO     | neventsw: 0
[2026-02-12 08:43:32] 2026-02-12 07:42:27,808 | INFO     | pid: 21490
[2026-02-12 08:43:32] 2026-02-12 07:42:27,809 | INFO     | pgrp: 21490
[2026-02-12 08:43:32] 2026-02-12 07:42:27,809 | INFO     | corecount: 8
[2026-02-12 08:43:32] 2026-02-12 07:42:27,809 | INFO     | event service: False
[2026-02-12 08:43:32] 2026-02-12 07:42:27,809 | INFO     | sizes: {0: 2281728, 1: 2282185, 2: 2282245, 12: 2282273, 15374: 2313322, 15375: 2313321, 15378: 2322505, 15380: 2322755}
[2026-02-12 08:43:32] 2026-02-12 07:42:27,809 | INFO     | --------------------------------------------------
[2026-02-12 08:43:32] 2026-02-12 07:42:27,809 | INFO     | 
[2026-02-12 08:43:32] 2026-02-12 07:42:27,809 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-02-12 08:43:32] 2026-02-12 07:42:28,019 | INFO     | time since job start (15393s) is within the limit (349056.0s)
[2026-02-12 08:43:32] 2026-02-12 07:42:28,279 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 08:43:32] 2026-02-12 07:42:28,279 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 08:43:32] 2026-02-12 07:42:28,279 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 08:43:32] 2026-02-12 07:42:28,280 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 08:43:32] 2026-02-12 07:42:28,280 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 08:43:32] 2026-02-12 07:42:28,280 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 08:43:32] 2026-02-12 07:42:28,280 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 08:43:32] 2026-02-12 07:42:28,280 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 08:43:32] 2026-02-12 07:42:28,280 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 08:43:32] 2026-02-12 07:42:28,280 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 08:43:32] 2026-02-12 07:42:28,280 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 08:43:32] 2026-02-12 07:42:28,280 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 08:43:32] 2026-02-12 07:42:28,280 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 08:43:32] 2026-02-12 07:42:28,281 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 08:43:32] 2026-02-12 07:42:28,281 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 08:43:32] 2026-02-12 07:42:28,281 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 08:43:32] 2026-02-12 07:42:28,281 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 08:43:32] 2026-02-12 07:42:28,281 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 08:43:32] 2026-02-12 07:42:28,281 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 08:43:32] 2026-02-12 07:42:28,281 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 08:43:32] 2026-02-12 07:42:28,281 | INFO     | job 7008629802 has completed (purged errors)
[2026-02-12 08:43:32] 2026-02-12 07:42:28,281 | INFO     | overall cleanup function is called
[2026-02-12 08:43:32] 2026-02-12 07:42:29,291 | INFO     | --- collectZombieJob: --- 10, [21490]
[2026-02-12 08:43:32] 2026-02-12 07:42:29,291 | INFO     | zombie collector waiting for pid 21490
[2026-02-12 08:43:32] 2026-02-12 07:42:29,291 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 08:43:32] 2026-02-12 07:42:29,291 | INFO     | collected zombie processes
[2026-02-12 08:43:32] 2026-02-12 07:42:29,291 | INFO     | will attempt to kill all subprocesses of pid=21490
[2026-02-12 08:43:32] 2026-02-12 07:42:29,459 | INFO     | process IDs to be killed: [21490] (in reverse order)
[2026-02-12 08:43:32] 2026-02-12 07:42:30,538 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 08:43:32] 2026-02-12 07:42:30,538 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 08:43:32] 2026-02-12 07:42:30,541 | INFO     | did not find any defunct processes belonging to 21490
[2026-02-12 08:43:32] 2026-02-12 07:42:30,546 | INFO     | did not find any defunct processes belonging to 21490
[2026-02-12 08:43:32] 2026-02-12 07:42:30,546 | INFO     | ready for new job
[2026-02-12 08:43:32] 2026-02-12 07:42:30,546 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 08:43:32] 2026-02-12 07:42:30,548 | INFO     | **************************************
[2026-02-12 08:43:32] 2026-02-12 07:42:30,548 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 08:43:32] 2026-02-12 07:42:30,548 | INFO     | **************************************
[2026-02-12 08:43:32] 2026-02-12 07:42:30,549 | INFO     | 
[2026-02-12 08:43:32] 2026-02-12 07:42:30,549 | INFO     | pilot is running in a VM
[2026-02-12 08:43:32] 2026-02-12 07:42:30,549 | INFO     | architecture information:
[2026-02-12 08:43:32] 2026-02-12 07:42:30,563 | INFO     | executing command: cat /etc/os-release
[2026-02-12 08:43:32] 2026-02-12 07:42:30,770 | INFO     | cat /etc/os-release:
[2026-02-12 08:43:32] NAME="CentOS Linux"
[2026-02-12 08:43:32] VERSION="7 (Core)"
[2026-02-12 08:43:32] ID="centos"
[2026-02-12 08:43:32] ID_LIKE="rhel fedora"
[2026-02-12 08:43:32] VERSION_ID="7"
[2026-02-12 08:43:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 08:43:32] ANSI_COLOR="0;31"
[2026-02-12 08:43:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 08:43:32] HOME_URL="https://www.centos.org/"
[2026-02-12 08:43:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 08:43:32] 
[2026-02-12 08:43:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 08:43:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 08:43:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 08:43:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 08:43:32] 
[2026-02-12 08:43:32] 2026-02-12 07:42:30,771 | INFO     | **************************************
[2026-02-12 08:43:32] 2026-02-12 07:42:31,275 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-02-12 08:43:32] 2026-02-12 07:42:31,474 | INFO     | sufficient remaining disk space (495394488320 B)
[2026-02-12 08:43:32] 2026-02-12 07:42:31,475 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 08:43:32] 2026-02-12 07:42:31,475 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 08:43:32] 2026-02-12 07:42:31,475 | INFO     | update_server=False
[2026-02-12 08:43:32] 2026-02-12 07:42:31,475 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 08:43:32] 2026-02-12 07:42:31,478 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 08:43:32] 2026-02-12 07:42:31,788 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 08:43:32] 2026-02-12 07:42:31,788 | INFO     | aborting loop
[2026-02-12 08:43:32] 2026-02-12 07:42:31,845 | INFO     | all job control threads have been joined
[2026-02-12 08:43:32] 2026-02-12 07:42:32,056 | INFO     | all data control threads have been joined
[2026-02-12 08:43:32] 2026-02-12 07:42:32,075 | INFO     | all payload control threads have been joined
[2026-02-12 08:43:32] 2026-02-12 07:42:32,481 | INFO     | [job] retrieve thread has finished
[2026-02-12 08:43:32] 2026-02-12 07:42:32,548 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 08:43:32] 2026-02-12 07:42:32,629 | INFO     | [payload] validate_post thread has finished
[2026-02-12 08:43:32] 2026-02-12 07:42:32,794 | INFO     | [job] job monitor thread has finished
[2026-02-12 08:43:32] 2026-02-12 07:42:32,823 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 08:43:32] 2026-02-12 07:42:32,851 | INFO     | [job] control thread has finished
[2026-02-12 08:43:32] 2026-02-12 07:42:32,869 | INFO     | [payload] failed_post thread has finished
[2026-02-12 08:43:32] 2026-02-12 07:42:32,932 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 08:43:32] 2026-02-12 07:42:32,974 | INFO     | [job] validate thread has finished
[2026-02-12 08:43:32] 2026-02-12 07:42:33,062 | INFO     | [data] control thread has finished
[2026-02-12 08:43:32] 2026-02-12 07:42:33,072 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 08:43:32] 2026-02-12 07:42:33,081 | INFO     | [payload] control thread has finished
[2026-02-12 08:43:32] 2026-02-12 07:42:33,485 | INFO     | [data] copytool_out thread has finished
[2026-02-12 08:43:32] 2026-02-12 07:42:33,533 | INFO     | [data] copytool_in thread has finished
[2026-02-12 08:43:32] 2026-02-12 07:42:33,633 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 08:43:32] 2026-02-12 07:42:33,656 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 08:43:32] 2026-02-12 07:42:33,831 | INFO     | [job] queue monitor thread has finished
[2026-02-12 08:43:32] 2026-02-12 07:42:37,668 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 08:43:32] 2026-02-12 07:43:01,221 | INFO     | PID=16976 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-12 08:43:32] 2026-02-12 07:43:01,221 | INFO     | .. there are 9 such processes running
[2026-02-12 08:43:32] 2026-02-12 07:43:01,221 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 08:43:32] 2026-02-12 07:43:01,222 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 08:43:32] 2026-02-12 07:43:01,222 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 08:43:32] 2026-02-12 07:43:21,032 | INFO     | [monitor] cgroup control has ended
[2026-02-12 08:43:32] 2026-02-12 07:43:21,792 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139962749470528)>', '<ExcThread(monitor, started 139962146076416)>']
[2026-02-12 08:43:32] 2026-02-12 07:43:22,347 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 08:43:32] 2026-02-12 07:43:22,347 | INFO     | [monitor] control thread has ended
[2026-02-12 08:43:32] 2026-02-12 07:43:26,818 | INFO     | all workflow threads have been joined
[2026-02-12 08:43:32] 2026-02-12 07:43:26,818 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 08:43:32] 2026-02-12 07:43:26,818 | INFO     | traces error code: 0
[2026-02-12 08:43:32] 2026-02-12 07:43:26,818 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 08:43:32] 2026-02-12 07:43:27,245 [wrapper] ==== pilot stdout END ====
[2026-02-12 08:43:32] 2026-02-12 07:43:27,294 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 08:43:32] 2026-02-12 07:43:27,382 [wrapper] pilotpid: 16976
[2026-02-12 08:43:32] 2026-02-12 07:43:27,422 [wrapper] Pilot exit status: 0
[2026-02-12 08:43:32] 2026-02-12 07:43:27,890 [wrapper] pandaids: 7008629802
[2026-02-12 08:43:32] 2026-02-12 07:43:28,841 [wrapper] cleanup supervisor_pilot 30314 16977
[2026-02-12 08:43:32] 2026-02-12 07:43:28,965 [wrapper] Test setup, not cleaning
[2026-02-12 08:43:32] 2026-02-12 07:43:29,092 [wrapper] apfmon messages muted
[2026-02-12 08:43:32] 2026-02-12 07:43:29,185 [wrapper] ==== wrapper stdout END ====
[2026-02-12 08:43:32] 2026-02-12 07:43:29,284 [wrapper] ==== wrapper stderr END ====
[2026-02-12 08:43:32]  *** Error codes and diagnostics ***
[2026-02-12 08:43:32]     "exeErrorCode": 0,
[2026-02-12 08:43:32]     "exeErrorDiag": "",
[2026-02-12 08:43:32]     "pilotErrorCode": 0,
[2026-02-12 08:43:32]     "pilotErrorDiag": "",
[2026-02-12 08:43:32]  *** Listing of results directory ***
[2026-02-12 08:43:32] total 678900
[2026-02-12 08:43:32] -rw-r--r--. 1 boinc boinc    584627 Feb 11 11:53 pilot3.tar.gz
[2026-02-12 08:43:32] -rwx------. 1 boinc boinc     36322 Feb 11 11:57 runpilot2-wrapper.sh
[2026-02-12 08:43:32] -rw-r--r--. 1 boinc boinc      5111 Feb 11 11:59 queuedata.json
[2026-02-12 08:43:32] -rw-r--r--. 1 boinc boinc       100 Feb 12 04:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 08:43:32] -rwxr-xr-x. 1 boinc boinc      7986 Feb 12 04:20 run_atlas
[2026-02-12 08:43:32] -rw-r--r--. 1 boinc boinc       105 Feb 12 04:20 job.xml
[2026-02-12 08:43:32] -rw-r--r--. 1 boinc boinc      6392 Feb 12 04:20 init_data.xml
[2026-02-12 08:43:32] -rw-r--r--. 2 boinc boinc 496334024 Feb 12 04:20 EVNT.48318016._000175.pool.root.1
[2026-02-12 08:43:32] -rw-r--r--. 2 boinc boinc     15845 Feb 12 04:20 start_atlas.sh
[2026-02-12 08:43:32] drwxrwx--x. 2 boinc boinc        68 Feb 12 04:20 shared
[2026-02-12 08:43:32] -rw-r--r--. 2 boinc boinc    597955 Feb 12 04:20 input.tar.gz
[2026-02-12 08:43:32] -rw-r--r--. 1 boinc boinc         0 Feb 12 04:20 boinc_lockfile
[2026-02-12 08:43:32] -rw-r--r--. 1 boinc boinc      2521 Feb 12 04:20 pandaJob.out
[2026-02-12 08:43:32] -rw-------. 1 boinc boinc       415 Feb 12 04:25 workernode_map.json
[2026-02-12 08:43:32] -rw-------. 1 boinc boinc   1005065 Feb 12 04:25 agis_schedconf.cvmfs.json
[2026-02-12 08:43:32] drwx------. 5 boinc boinc      4096 Feb 12 04:25 pilot3
[2026-02-12 08:43:32] -rw-------. 1 boinc boinc 189611836 Feb 12 08:41 HITS.48318018._008931.pool.root.1
[2026-02-12 08:43:32] -rw-r--r--. 1 boinc boinc       531 Feb 12 08:41 boinc_task_state.xml
[2026-02-12 08:43:32] -rw-------. 1 boinc boinc        95 Feb 12 08:42 pilot_heartbeat.json
[2026-02-12 08:43:32] -rw-------. 1 boinc boinc      1012 Feb 12 08:42 memory_monitor_summary.json
[2026-02-12 08:43:32] -rw-------. 1 boinc boinc   1512955 Feb 12 08:42 agis_ddmendpoints.agis.ALL.json
[2026-02-12 08:43:32] -rw-------. 1 boinc boinc    515902 Feb 12 08:42 log.48318018._008931.job.log.tgz.1
[2026-02-12 08:43:32] -rw-------. 1 boinc boinc      6314 Feb 12 08:42 heartbeat.json
[2026-02-12 08:43:32] -rw-r--r--. 1 boinc boinc      8192 Feb 12 08:43 boinc_mmap_file
[2026-02-12 08:43:32] -rw-r--r--. 1 boinc boinc        28 Feb 12 08:43 wrapper_checkpoint.txt
[2026-02-12 08:43:32] -rw-------. 1 boinc boinc      4881 Feb 12 08:43 pilotlog.txt
[2026-02-12 08:43:32] -rw-------. 1 boinc boinc   2147408 Feb 12 08:43 log.48318018._008931.job.log.1
[2026-02-12 08:43:32] -rw-------. 1 boinc boinc       357 Feb 12 08:43 output.list
[2026-02-12 08:43:32] -rw-r--r--. 1 boinc boinc       620 Feb 12 08:43 runtime_log
[2026-02-12 08:43:32] -rw-------. 1 boinc boinc   2682880 Feb 12 08:43 result.tar.gz
[2026-02-12 08:43:32] -rw-r--r--. 1 boinc boinc      8832 Feb 12 08:43 runtime_log.err
[2026-02-12 08:43:32] -rw-------. 1 boinc boinc       655 Feb 12 08:43 dxYKDmR5MA9n9Rq4apOajLDm4fhM0noT9bVooX4SDmCNjKDmQdXHjn.diag
[2026-02-12 08:43:32] -rw-r--r--. 1 boinc boinc     20736 Feb 12 08:43 stderr.txt
[2026-02-12 08:43:32] HITS file was successfully produced:
[2026-02-12 08:43:32] -rw-------. 1 boinc boinc 189611836 Feb 12 08:41 shared/HITS.pool.root.1
[2026-02-12 08:43:32]  *** Contents of shared directory: ***
[2026-02-12 08:43:32] total 673092
[2026-02-12 08:43:32] -rw-r--r--. 2 boinc boinc 496334024 Feb 12 04:20 ATLAS.root_0
[2026-02-12 08:43:32] -rw-r--r--. 2 boinc boinc     15845 Feb 12 04:20 start_atlas.sh
[2026-02-12 08:43:32] -rw-r--r--. 2 boinc boinc    597955 Feb 12 04:20 input.tar.gz
[2026-02-12 08:43:32] -rw-------. 1 boinc boinc 189611836 Feb 12 08:41 HITS.pool.root.1
[2026-02-12 08:43:32] -rw-------. 1 boinc boinc   2682880 Feb 12 08:43 result.tar.gz
08:43:33 (12828): run_atlas exited; CPU time 58911.404826
08:43:33 (12828): called boinc_finish(0)

</stderr_txt>
]]>

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