Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
22:46:14 (940155): wrapper (7.7.26015): starting
22:46:14 (940155): wrapper: running run_atlas (--nthreads 4)
[2026-02-11 22:46:14] Arguments: --nthreads 4
[2026-02-11 22:46:14] Threads: 4
[2026-02-11 22:46:14] Checking for CVMFS
[2026-02-11 22:46:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 22:46:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 22:46:15] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 22:46:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 22:46:15] 2.13.1.0 3479107 8194 95076 156129 2 50 9798992 10240001 1822 130560 0 14070243 99.996 274392 367 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-02-11 22:46:15] CVMFS is ok
[2026-02-11 22:46:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 22:46:15] Checking for apptainer binary...
[2026-02-11 22:46:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-11 22:46:15] Running /usr/bin/apptainer --version
[2026-02-11 22:46:15] apptainer version 1.4.5
[2026-02-11 22:46:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 22:46:15] julianvlneu
[2026-02-11 22:46:15] apptainer works
[2026-02-11 22:46:15] Set ATHENA_PROC_NUMBER=4
[2026-02-11 22:46:15] Set ATHENA_CORE_NUMBER=4
[2026-02-11 22:46:15] Starting ATLAS job with PandaID=7008551188
[2026-02-11 22:46:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-11 23:41:47]  *** The last 200 lines of the pilot log: ***
[2026-02-11 23:41:47]  status_code=0
[2026-02-11 23:41:47]  storage_token=
[2026-02-11 23:41:47]  surl=/var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-7008551188/log.48318034._016081.job.log.tgz.1
[2026-02-11 23:41:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/d8/log.48318034._016081.job.log.tgz.1
[2026-02-11 23:41:47]  workdir=None
[2026-02-11 23:41:47] ]
[2026-02-11 23:41:47] 2026-02-11 22:41:10,288 | INFO     | transferring file log.48318034._016081.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-7008551188/log.48318034._016081.job.log.tgz.1 to /var/li
[2026-02-11 23:41:47] 2026-02-11 22:41:10,288 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-7008551188/log.48318034._016081.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2026-02-11 23:41:47] 2026-02-11 22:41:10,309 | INFO     | adding to output.list: log.48318034._016081.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/d8/log.48318034._016081.job.log.tg
[2026-02-11 23:41:47] 2026-02-11 22:41:10,311 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-11 23:41:47] 2026-02-11 22:41:10,311 | INFO     | summary of transferred files:
[2026-02-11 23:41:47] 2026-02-11 22:41:10,311 | INFO     |  -- lfn=log.48318034._016081.job.log.tgz.1, status_code=0, status=transferred
[2026-02-11 23:41:47] 2026-02-11 22:41:10,311 | INFO     | stage-out finished correctly
[2026-02-11 23:41:47] 2026-02-11 22:41:10,451 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-11 23:41:47] 2026-02-11 22:41:10,474 | INFO     | job 7008551188 has state=finished
[2026-02-11 23:41:47] 2026-02-11 22:41:10,474 | INFO     | preparing for final server update for job 7008551188 in state='finished'
[2026-02-11 23:41:47] 2026-02-11 22:41:11,634 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-11 23:41:47] 2026-02-11 22:41:11,634 | INFO     | reading metadata from: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-7008551188/jobReport.json
[2026-02-11 23:41:47] 2026-02-11 22:41:11,635 | INFO     | added worker_node to metadata from /var/lib/boinc_data/boinc-01/slots/0/workernode_map.json
[2026-02-11 23:41:47] 2026-02-11 22:41:11,635 | INFO     | this job has now completed (state=finished)
[2026-02-11 23:41:47] 2026-02-11 22:41:11,635 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-11 23:41:47] 2026-02-11 22:41:11,635 | INFO     | log transfer has been attempted: DONE
[2026-02-11 23:41:47] 2026-02-11 22:41:11,636 | INFO     | job 7008551188 has finished - writing final server update
[2026-02-11 23:41:47] 2026-02-11 22:41:11,636 | INFO     | total number of processed events: 400 (read)
[2026-02-11 23:41:47] 2026-02-11 22:41:11,637 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-7008551188/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 23:41:47] 2026-02-11 22:41:11,637 | INFO     | extracted standard info from prmon json
[2026-02-11 23:41:47] 2026-02-11 22:41:11,637 | INFO     | extracted standard memory fields from prmon json
[2026-02-11 23:41:47] 2026-02-11 22:41:11,637 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-11 23:41:47] 2026-02-11 22:41:11,638 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-11 23:41:47] 2026-02-11 22:41:11,638 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-11 23:41:47] 2026-02-11 22:41:11,638 | INFO     | fitting pss+swap vs Time
[2026-02-11 23:41:47] 2026-02-11 22:41:11,638 | INFO     | sum of square deviations: 32179208.0
[2026-02-11 23:41:47] 2026-02-11 22:41:11,638 | INFO     | sum of deviations: -3876429220.0000005
[2026-02-11 23:41:47] 2026-02-11 22:41:11,638 | INFO     | mean x: 1770848131.0
[2026-02-11 23:41:47] 2026-02-11 22:41:11,638 | INFO     | mean y: 2421802.234042553
[2026-02-11 23:41:47] 2026-02-11 22:41:11,638 | INFO     | intersect: 213325491754.4463
[2026-02-11 23:41:47] 2026-02-11 22:41:11,639 | INFO     | chi2: 0.02509709231714092
[2026-02-11 23:41:47] 2026-02-11 22:41:11,639 | INFO     | current memory leak: -120.46 B/s (using 47 data points, chi2=0.03)
[2026-02-11 23:41:47] 2026-02-11 22:41:11,639 | INFO     | could have reported an average CPU frequency of 4399 MHz (5 samples)
[2026-02-11 23:41:47] 2026-02-11 22:41:11,639 | INFO     | ..............................
[2026-02-11 23:41:47] 2026-02-11 22:41:11,639 | INFO     | . Timing measurements:
[2026-02-11 23:41:47] 2026-02-11 22:41:11,639 | INFO     | . get job = 0 s
[2026-02-11 23:41:47] 2026-02-11 22:41:11,639 | INFO     | . initial setup = 7 s
[2026-02-11 23:41:47] 2026-02-11 22:41:11,639 | INFO     | . payload setup = 7 s
[2026-02-11 23:41:47] 2026-02-11 22:41:11,639 | INFO     | . stage-in = 0 s
[2026-02-11 23:41:47] 2026-02-11 22:41:11,639 | INFO     | . payload execution = 3250 s
[2026-02-11 23:41:47] 2026-02-11 22:41:11,639 | INFO     | . stage-out = 0 s
[2026-02-11 23:41:47] 2026-02-11 22:41:11,639 | INFO     | . log creation = 0 s
[2026-02-11 23:41:47] 2026-02-11 22:41:11,639 | INFO     | ..............................
[2026-02-11 23:41:47] 2026-02-11 22:41:11,661 | INFO     | 
[2026-02-11 23:41:47] 2026-02-11 22:41:11,661 | INFO     | job summary report
[2026-02-11 23:41:47] 2026-02-11 22:41:11,661 | INFO     | --------------------------------------------------
[2026-02-11 23:41:47] 2026-02-11 22:41:11,661 | INFO     | PanDA job id: 7008551188
[2026-02-11 23:41:47] 2026-02-11 22:41:11,661 | INFO     | task id: 48318034
[2026-02-11 23:41:47] 2026-02-11 22:41:11,661 | INFO     | errors: (none)
[2026-02-11 23:41:47] 2026-02-11 22:41:11,661 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-11 23:41:47] 2026-02-11 22:41:11,661 | INFO     | pilot state: finished 
[2026-02-11 23:41:47] 2026-02-11 22:41:11,661 | INFO     | transexitcode: 0
[2026-02-11 23:41:47] 2026-02-11 22:41:11,661 | INFO     | exeerrorcode: 0
[2026-02-11 23:41:47] 2026-02-11 22:41:11,661 | INFO     | exeerrordiag: 
[2026-02-11 23:41:47] 2026-02-11 22:41:11,661 | INFO     | exitcode: 0
[2026-02-11 23:41:47] 2026-02-11 22:41:11,661 | INFO     | exitmsg: OK
[2026-02-11 23:41:47] 2026-02-11 22:41:11,661 | INFO     | cpuconsumptiontime: 12041 s
[2026-02-11 23:41:47] 2026-02-11 22:41:11,661 | INFO     | nevents: 400
[2026-02-11 23:41:47] 2026-02-11 22:41:11,661 | INFO     | neventsw: 0
[2026-02-11 23:41:47] 2026-02-11 22:41:11,662 | INFO     | pid: 948823
[2026-02-11 23:41:47] 2026-02-11 22:41:11,662 | INFO     | pgrp: 948823
[2026-02-11 23:41:47] 2026-02-11 22:41:11,662 | INFO     | corecount: 4
[2026-02-11 23:41:47] 2026-02-11 22:41:11,662 | INFO     | event service: False
[2026-02-11 23:41:47] 2026-02-11 22:41:11,662 | INFO     | sizes: {0: 2282149, 10: 2282149, 3262: 2316575, 3263: 2316745}
[2026-02-11 23:41:47] 2026-02-11 22:41:11,662 | INFO     | --------------------------------------------------
[2026-02-11 23:41:47] 2026-02-11 22:41:11,662 | INFO     | 
[2026-02-11 23:41:47] 2026-02-11 22:41:11,662 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/0
[2026-02-11 23:41:47] 2026-02-11 22:41:11,685 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-11 23:41:47] 2026-02-11 22:41:11,686 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-11 23:41:47] 2026-02-11 22:41:11,686 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-11 23:41:47] 2026-02-11 22:41:11,686 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-11 23:41:47] 2026-02-11 22:41:11,686 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-11 23:41:47] 2026-02-11 22:41:11,686 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-11 23:41:47] 2026-02-11 22:41:11,686 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-11 23:41:47] 2026-02-11 22:41:11,686 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-11 23:41:47] 2026-02-11 22:41:11,686 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-11 23:41:47] 2026-02-11 22:41:11,686 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-11 23:41:47] 2026-02-11 22:41:11,686 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-11 23:41:47] 2026-02-11 22:41:11,686 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-11 23:41:47] 2026-02-11 22:41:11,686 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-11 23:41:47] 2026-02-11 22:41:11,686 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-11 23:41:47] 2026-02-11 22:41:11,686 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-11 23:41:47] 2026-02-11 22:41:11,686 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-11 23:41:47] 2026-02-11 22:41:11,686 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-11 23:41:47] 2026-02-11 22:41:11,686 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-11 23:41:47] 2026-02-11 22:41:11,686 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-11 23:41:47] 2026-02-11 22:41:11,686 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-11 23:41:47] 2026-02-11 22:41:11,686 | INFO     | job 7008551188 has completed (purged errors)
[2026-02-11 23:41:47] 2026-02-11 22:41:11,686 | INFO     | overall cleanup function is called
[2026-02-11 23:41:47] 2026-02-11 22:41:12,693 | INFO     | --- collectZombieJob: --- 10, [948823]
[2026-02-11 23:41:47] 2026-02-11 22:41:12,693 | INFO     | zombie collector waiting for pid 948823
[2026-02-11 23:41:47] 2026-02-11 22:41:12,693 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-11 23:41:47] 2026-02-11 22:41:12,693 | INFO     | collected zombie processes
[2026-02-11 23:41:47] 2026-02-11 22:41:12,693 | INFO     | will attempt to kill all subprocesses of pid=948823
[2026-02-11 23:41:47] 2026-02-11 22:41:12,809 | INFO     | process IDs to be killed: [948823] (in reverse order)
[2026-02-11 23:41:47] 2026-02-11 22:41:12,876 | WARNING  | found no corresponding commands to process id(s)
[2026-02-11 23:41:47] 2026-02-11 22:41:12,877 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-11 23:41:47] 2026-02-11 22:41:12,881 | INFO     | did not find any defunct processes belonging to 948823
[2026-02-11 23:41:47] 2026-02-11 22:41:12,884 | INFO     | did not find any defunct processes belonging to 948823
[2026-02-11 23:41:47] 2026-02-11 22:41:12,885 | INFO     | ready for new job
[2026-02-11 23:41:47] 2026-02-11 22:41:12,885 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-11 23:41:47] 2026-02-11 22:41:12,886 | INFO     | **************************************
[2026-02-11 23:41:47] 2026-02-11 22:41:12,886 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-11 23:41:47] 2026-02-11 22:41:12,886 | INFO     | **************************************
[2026-02-11 23:41:47] 2026-02-11 22:41:12,886 | INFO     | 
[2026-02-11 23:41:47] 2026-02-11 22:41:12,887 | INFO     | pilot is running in a VM
[2026-02-11 23:41:47] 2026-02-11 22:41:12,887 | INFO     | architecture information:
[2026-02-11 23:41:47] 2026-02-11 22:41:12,887 | INFO     | executing command: cat /etc/os-release
[2026-02-11 23:41:47] 2026-02-11 22:41:12,901 | INFO     | cat /etc/os-release:
[2026-02-11 23:41:47] NAME="CentOS Linux"
[2026-02-11 23:41:47] VERSION="7 (Core)"
[2026-02-11 23:41:47] ID="centos"
[2026-02-11 23:41:47] ID_LIKE="rhel fedora"
[2026-02-11 23:41:47] VERSION_ID="7"
[2026-02-11 23:41:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-11 23:41:47] ANSI_COLOR="0;31"
[2026-02-11 23:41:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-11 23:41:47] HOME_URL="https://www.centos.org/"
[2026-02-11 23:41:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-11 23:41:47] 
[2026-02-11 23:41:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-11 23:41:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-11 23:41:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-11 23:41:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-11 23:41:47] 
[2026-02-11 23:41:47] 2026-02-11 22:41:12,902 | INFO     | **************************************
[2026-02-11 23:41:47] 2026-02-11 22:41:13,405 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/0
[2026-02-11 23:41:47] 2026-02-11 22:41:13,420 | INFO     | sufficient remaining disk space (138441392128 B)
[2026-02-11 23:41:47] 2026-02-11 22:41:13,420 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-11 23:41:47] 2026-02-11 22:41:13,421 | INFO     | current server update state: UPDATING_FINAL
[2026-02-11 23:41:47] 2026-02-11 22:41:13,421 | INFO     | update_server=False
[2026-02-11 23:41:47] 2026-02-11 22:41:13,421 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-11 23:41:47] 2026-02-11 22:41:13,421 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-11 23:41:47] 2026-02-11 22:41:13,421 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-11 23:41:47] 2026-02-11 22:41:13,998 | INFO     | all job control threads have been joined
[2026-02-11 23:41:47] 2026-02-11 22:41:14,209 | INFO     | all payload control threads have been joined
[2026-02-11 23:41:47] 2026-02-11 22:41:14,427 | INFO     | [job] queue monitor thread has finished
[2026-02-11 23:41:47] 2026-02-11 22:41:14,427 | INFO     | [job] retrieve thread has finished
[2026-02-11 23:41:47] 2026-02-11 22:41:14,473 | INFO     | all data control threads have been joined
[2026-02-11 23:41:47] 2026-02-11 22:41:14,853 | INFO     | [job] validate thread has finished
[2026-02-11 23:41:47] 2026-02-11 22:41:14,906 | INFO     | [job] create_data_payload thread has finished
[2026-02-11 23:41:47] 2026-02-11 22:41:14,991 | INFO     | [payload] validate_pre thread has finished
[2026-02-11 23:41:47] 2026-02-11 22:41:15,004 | INFO     | [job] control thread has finished
[2026-02-11 23:41:47] 2026-02-11 22:41:15,135 | INFO     | [data] copytool_in thread has finished
[2026-02-11 23:41:47] 2026-02-11 22:41:15,215 | INFO     | [payload] control thread has finished
[2026-02-11 23:41:47] 2026-02-11 22:41:15,428 | INFO     | [data] copytool_out thread has finished
[2026-02-11 23:41:47] 2026-02-11 22:41:15,469 | INFO     | [payload] execute_payloads thread has finished
[2026-02-11 23:41:47] 2026-02-11 22:41:15,479 | INFO     | [data] control thread has finished
[2026-02-11 23:41:47] 2026-02-11 22:41:15,791 | INFO     | [payload] validate_post thread has finished
[2026-02-11 23:41:47] 2026-02-11 22:41:15,952 | INFO     | [payload] failed_post thread has finished
[2026-02-11 23:41:47] 2026-02-11 22:41:16,176 | WARNING  | process 948823 can no longer be monitored (due to stat problems) - aborting
[2026-02-11 23:41:47] 2026-02-11 22:41:16,253 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 23:41:47] 2026-02-11 22:41:16,254 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 23:41:47] 2026-02-11 22:41:16,254 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-11 23:41:47] 2026-02-11 22:41:16,254 | WARNING  | maxPSS not found in memory monitor output
[2026-02-11 23:41:47] 2026-02-11 22:41:16,254 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-7008551188/payload.stdout) since it has not been created yet
[2026-02-11 23:41:47] 2026-02-11 22:41:16,254 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/0
[2026-02-11 23:41:47] 2026-02-11 22:41:16,269 | INFO     | sufficient remaining disk space (138441392128 B)
[2026-02-11 23:41:47] 2026-02-11 22:41:16,269 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-11 23:41:47] 2026-02-11 22:41:16,269 | INFO     | output file size check: skipping output file /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-7008551188/HITS.48318034._016081.pool.root.1 since it does not exist
[2026-02-11 23:41:47] 2026-02-11 22:41:16,377 | INFO     | number of running child processes to parent process 948823: 1
[2026-02-11 23:41:47] 2026-02-11 22:41:16,377 | INFO     | maximum number of monitored processes: 6
[2026-02-11 23:41:47] 2026-02-11 22:41:16,377 | INFO     | aborting job monitoring since job object (job id=7008551188) has expired
[2026-02-11 23:41:47] 2026-02-11 22:41:16,377 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-11 23:41:47] 2026-02-11 22:41:16,377 | INFO     | will abort loop
[2026-02-11 23:41:47] 2026-02-11 22:41:16,483 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-11 23:41:47] 2026-02-11 22:41:17,383 | INFO     | [job] job monitor thread has finished
[2026-02-11 23:41:47] 2026-02-11 22:41:20,491 | INFO     | [data] queue_monitor thread has finished
[2026-02-11 23:41:47] 2026-02-11 22:41:23,819 | INFO     | job.realtimelogging is not enabled
[2026-02-11 23:41:47] 2026-02-11 22:41:24,824 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-11 23:41:47] 2026-02-11 22:41:41,733 | INFO     | [monitor] cgroup control has ended
[2026-02-11 23:41:47] 2026-02-11 22:41:42,231 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140695990728512)>', '<ExcThread(monitor, started 140695041980160)>']
[2026-02-11 23:41:47] 2026-02-11 22:41:42,350 | INFO     | 3281s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-02-11 23:41:47] 2026-02-11 22:41:43,470 | INFO     | PID=944268 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-11 23:41:47] 2026-02-11 22:41:43,471 | INFO     | .. there are 3 such processes running
[2026-02-11 23:41:47] 2026-02-11 22:41:43,471 | INFO     | found 0 job(s) in 20 queues
[2026-02-11 23:41:47] 2026-02-11 22:41:43,471 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-11 23:41:47] 2026-02-11 22:41:43,471 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-11 23:41:47] 2026-02-11 22:41:43,471 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-11 23:41:47] 2026-02-11 22:41:43,471 | INFO     | [monitor] control thread has ended
[2026-02-11 23:41:47] 2026-02-11 22:41:47,256 | INFO     | all workflow threads have been joined
[2026-02-11 23:41:47] 2026-02-11 22:41:47,257 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-11 23:41:47] 2026-02-11 22:41:47,257 | INFO     | traces error code: 0
[2026-02-11 23:41:47] 2026-02-11 22:41:47,257 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-11 23:41:47] 2026-02-11 22:41:47,332 [wrapper] ==== pilot stdout END ====
[2026-02-11 23:41:47] 2026-02-11 22:41:47,337 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-11 23:41:47] 2026-02-11 22:41:47,341 [wrapper] pilotpid: 944268
[2026-02-11 23:41:47] 2026-02-11 22:41:47,346 [wrapper] Pilot exit status: 0
[2026-02-11 23:41:47] 2026-02-11 22:41:47,365 [wrapper] pandaids: 7008551188
[2026-02-11 23:41:47] 2026-02-11 22:41:47,409 [wrapper] cleanup supervisor_pilot  990455 944269
[2026-02-11 23:41:47] 2026-02-11 22:41:47,414 [wrapper] Test setup, not cleaning
[2026-02-11 23:41:47] 2026-02-11 22:41:47,419 [wrapper] apfmon messages muted
[2026-02-11 23:41:47] 2026-02-11 22:41:47,423 [wrapper] ==== wrapper stdout END ====
[2026-02-11 23:41:47] 2026-02-11 22:41:47,429 [wrapper] ==== wrapper stderr END ====
[2026-02-11 23:41:47]  *** Error codes and diagnostics ***
[2026-02-11 23:41:47]     "exeErrorCode": 0,
[2026-02-11 23:41:47]     "exeErrorDiag": "",
[2026-02-11 23:41:47]     "pilotErrorCode": 0,
[2026-02-11 23:41:47]     "pilotErrorDiag": "",
[2026-02-11 23:41:47]  *** Listing of results directory ***
[2026-02-11 23:41:47] insgesamt 672308
[2026-02-11 23:41:47] -rw-r--r-- 1 yeti boinc    584627 Feb 11 11:53 pilot3.tar.gz
[2026-02-11 23:41:47] -rwx------ 1 yeti boinc     36322 Feb 11 11:54 runpilot2-wrapper.sh
[2026-02-11 23:41:47] -rw-r--r-- 1 yeti boinc      5111 Feb 11 11:56 queuedata.json
[2026-02-11 23:41:47] -rw-r--r-- 1 yeti boinc       100 Feb 11 22:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-11 23:41:47] -rwxr-xr-x 1 yeti boinc      7986 Feb 11 22:46 run_atlas
[2026-02-11 23:41:47] -rw-r--r-- 1 yeti boinc       105 Feb 11 22:46 job.xml
[2026-02-11 23:41:47] -rw-r--r-- 2 yeti boinc 498577578 Feb 11 22:46 EVNT.48318032._000225.pool.root.1
[2026-02-11 23:41:47] -rw-r--r-- 2 yeti boinc     15845 Feb 11 22:46 start_atlas.sh
[2026-02-11 23:41:47] drwxrwx--x 2 yeti boinc      4096 Feb 11 22:46 shared
[2026-02-11 23:41:47] -rw-r--r-- 2 yeti boinc    597968 Feb 11 22:46 input.tar.gz
[2026-02-11 23:41:47] -rw-r--r-- 1 yeti boinc         0 Feb 11 22:46 boinc_setup_complete
[2026-02-11 23:41:47] -rw-r--r-- 1 yeti boinc      6732 Feb 11 22:46 init_data.xml
[2026-02-11 23:41:47] -rw-r--r-- 1 yeti boinc         0 Feb 11 22:46 boinc_lockfile
[2026-02-11 23:41:47] -rw-r--r-- 1 yeti boinc      2538 Feb 11 22:46 pandaJob.out
[2026-02-11 23:41:47] -rw------- 1 yeti boinc        52 Feb 11 22:46 setup.sh.local
[2026-02-11 23:41:47] -rw------- 1 yeti boinc   1005065 Feb 11 22:46 agis_schedconf.cvmfs.json
[2026-02-11 23:41:47] -rw------- 1 yeti boinc   1512955 Feb 11 22:46 agis_ddmendpoints.agis.ALL.json
[2026-02-11 23:41:47] -rw------- 1 yeti boinc       425 Feb 11 22:46 workernode_map.json
[2026-02-11 23:41:47] drwx------ 5 yeti boinc      4096 Feb 11 22:46 pilot3
[2026-02-11 23:41:47] -rw-r--r-- 1 yeti boinc       530 Feb 11 23:40 boinc_task_state.xml
[2026-02-11 23:41:47] -rw------- 1 yeti boinc 184376174 Feb 11 23:40 HITS.48318034._016081.pool.root.1
[2026-02-11 23:41:47] -rw------- 1 yeti boinc        95 Feb 11 23:41 pilot_heartbeat.json
[2026-02-11 23:41:47] -rw------- 1 yeti boinc      1015 Feb 11 23:41 memory_monitor_summary.json
[2026-02-11 23:41:47] -rw------- 1 yeti boinc    265034 Feb 11 23:41 log.48318034._016081.job.log.tgz.1
[2026-02-11 23:41:47] -rw------- 1 yeti boinc      6286 Feb 11 23:41 heartbeat.json
[2026-02-11 23:41:47] -rw-r--r-- 1 yeti boinc        27 Feb 11 23:41 wrapper_checkpoint.txt
[2026-02-11 23:41:47] -rw-r--r-- 1 yeti boinc      8192 Feb 11 23:41 boinc_mmap_file
[2026-02-11 23:41:47] -rw------- 1 yeti boinc      6636 Feb 11 23:41 pilotlog.txt
[2026-02-11 23:41:47] -rw------- 1 yeti boinc    508939 Feb 11 23:41 log.48318034._016081.job.log.1
[2026-02-11 23:41:47] -rw------- 1 yeti boinc       357 Feb 11 23:41 output.list
[2026-02-11 23:41:47] -rw-r--r-- 1 yeti boinc       620 Feb 11 23:41 runtime_log
[2026-02-11 23:41:47] -rw------- 1 yeti boinc    788480 Feb 11 23:41 result.tar.gz
[2026-02-11 23:41:47] -rw-r--r-- 1 yeti boinc      9556 Feb 11 23:41 runtime_log.err
[2026-02-11 23:41:47] -rw------- 1 yeti boinc       640 Feb 11 23:41 gVbLDmr2MA9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmM7jKDmzSdysm.diag
[2026-02-11 23:41:47] -rw-r--r-- 1 yeti boinc     22039 Feb 11 23:41 stderr.txt
[2026-02-11 23:41:47] HITS file was successfully produced:
[2026-02-11 23:41:47] -rw------- 1 yeti boinc 184376174 Feb 11 23:40 shared/HITS.pool.root.1
[2026-02-11 23:41:47]  *** Contents of shared directory: ***
[2026-02-11 23:41:47] insgesamt 668332
[2026-02-11 23:41:47] -rw-r--r-- 2 yeti boinc 498577578 Feb 11 22:46 ATLAS.root_0
[2026-02-11 23:41:47] -rw-r--r-- 2 yeti boinc     15845 Feb 11 22:46 start_atlas.sh
[2026-02-11 23:41:47] -rw-r--r-- 2 yeti boinc    597968 Feb 11 22:46 input.tar.gz
[2026-02-11 23:41:47] -rw------- 1 yeti boinc 184376174 Feb 11 23:40 HITS.pool.root.1
[2026-02-11 23:41:47] -rw------- 1 yeti boinc    788480 Feb 11 23:41 result.tar.gz
23:41:48 (940155): run_atlas exited; CPU time 12122.573601
23:41:48 (940155): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN