Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:30:16 (2030443): wrapper (7.7.26015): starting
12:30:16 (2030443): wrapper: running run_atlas (--nthreads 8)
[2026-02-11 12:30:16] Arguments: --nthreads 8
[2026-02-11 12:30:16] Threads: 8
[2026-02-11 12:30:16] Checking for CVMFS
[2026-02-11 12:30:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 12:30:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 12:30:17] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 12:30:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 12:30:18] 2.13.3.0 12210 70100 282496 156124 0 734 26919520 40960001 46002 16776704 0 538155316 99.749 359893537 45957 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-11 12:30:18] CVMFS is ok
[2026-02-11 12:30:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-11 12:30:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-11 12:30:18] Further information can be found at the LHC@home message board.
[2026-02-11 12:30:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 12:30:18] Checking for apptainer binary...
[2026-02-11 12:30:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-11 12:30:18] Running /usr/bin/apptainer --version
[2026-02-11 12:30:18] apptainer version 1.4.5-2.el9
[2026-02-11 12:30:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 12:30:19] c-208-37.aglt2.org
[2026-02-11 12:30:19] apptainer works
[2026-02-11 12:30:19] Set ATHENA_PROC_NUMBER=8
[2026-02-11 12:30:19] Set ATHENA_CORE_NUMBER=8
[2026-02-11 12:30:19] Starting ATLAS job with PandaID=7008552051
[2026-02-11 12:30:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-11 13:49:38]  *** The last 200 lines of the pilot log: ***
[2026-02-11 13:49:38]  is_tar=False
[2026-02-11 13:49:38]  lfn=log.48318034._016322.job.log.tgz.1
[2026-02-11 13:49:38]  mtime=0
[2026-02-11 13:49:38]  protocol_id=None
[2026-02-11 13:49:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-11 13:49:38]  replicas=None
[2026-02-11 13:49:38]  scope=mc23_13p6TeV
[2026-02-11 13:49:38]  status=None
[2026-02-11 13:49:38]  status_code=0
[2026-02-11 13:49:38]  storage_token=
[2026-02-11 13:49:38]  surl=/tmp/boinchome/slots/7/PanDA_Pilot-7008552051/log.48318034._016322.job.log.tgz.1
[2026-02-11 13:49:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a3/68/log.48318034._016322.job.log.tgz.1
[2026-02-11 13:49:38]  workdir=None
[2026-02-11 13:49:38] ]
[2026-02-11 13:49:38] 2026-02-11 18:48:57,415 | INFO     | transferring file log.48318034._016322.job.log.tgz.1 from /tmp/boinchome/slots/7/PanDA_Pilot-7008552051/log.48318034._016322.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-11 13:49:38] 2026-02-11 18:48:57,415 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/7/PanDA_Pilot-7008552051/log.48318034._016322.job.log.tgz.1 /tmp/boinchome/slots/7/log.48318034._016322.job
[2026-02-11 13:49:38] 2026-02-11 18:48:57,430 | INFO     | adding to output.list: log.48318034._016322.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a3/68/log.48318034._016322.job.log.tg
[2026-02-11 13:49:38] 2026-02-11 18:48:57,431 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-11 13:49:38] 2026-02-11 18:48:57,431 | INFO     | summary of transferred files:
[2026-02-11 13:49:38] 2026-02-11 18:48:57,431 | INFO     |  -- lfn=log.48318034._016322.job.log.tgz.1, status_code=0, status=transferred
[2026-02-11 13:49:38] 2026-02-11 18:48:57,431 | INFO     | stage-out finished correctly
[2026-02-11 13:49:38] 2026-02-11 18:48:58,822 | INFO     | time since job start (4595s) is within the limit (349056.0s)
[2026-02-11 13:49:38] 2026-02-11 18:49:00,487 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-11 13:49:38] 2026-02-11 18:49:00,680 | WARNING  | process 2073319 can no longer be monitored (due to stat problems) - aborting
[2026-02-11 13:49:38] 2026-02-11 18:49:00,681 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-7008552051/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 13:49:38] 2026-02-11 18:49:00,832 | INFO     | time since job start (4597s) is within the limit (349056.0s)
[2026-02-11 13:49:38] 2026-02-11 18:49:01,287 | INFO     | number of running child processes to parent process 2073319: 1
[2026-02-11 13:49:38] 2026-02-11 18:49:01,287 | INFO     | maximum number of monitored processes: 8
[2026-02-11 13:49:38] 2026-02-11 18:49:02,840 | INFO     | time since job start (4599s) is within the limit (349056.0s)
[2026-02-11 13:49:38] 2026-02-11 18:49:03,157 | INFO     | job 7008552051 has state=finished
[2026-02-11 13:49:38] 2026-02-11 18:49:03,157 | INFO     | preparing for final server update for job 7008552051 in state='finished'
[2026-02-11 13:49:38] 2026-02-11 18:49:03,157 | INFO     | reading metadata from: /tmp/boinchome/slots/7/PanDA_Pilot-7008552051/jobReport.json
[2026-02-11 13:49:38] 2026-02-11 18:49:03,159 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/7/workernode_map.json
[2026-02-11 13:49:38] 2026-02-11 18:49:03,159 | INFO     | this job has now completed (state=finished)
[2026-02-11 13:49:38] 2026-02-11 18:49:03,159 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-11 13:49:38] 2026-02-11 18:49:03,159 | INFO     | log transfer has been attempted: DONE
[2026-02-11 13:49:38] 2026-02-11 18:49:03,159 | INFO     | job 7008552051 has finished - writing final server update
[2026-02-11 13:49:38] 2026-02-11 18:49:03,159 | INFO     | total number of processed events: 400 (read)
[2026-02-11 13:49:38] 2026-02-11 18:49:03,230 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-7008552051/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 13:49:38] 2026-02-11 18:49:03,231 | INFO     | extracted standard info from prmon json
[2026-02-11 13:49:38] 2026-02-11 18:49:03,231 | INFO     | extracted standard memory fields from prmon json
[2026-02-11 13:49:38] 2026-02-11 18:49:03,231 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-11 13:49:38] 2026-02-11 18:49:03,231 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-11 13:49:38] 2026-02-11 18:49:03,231 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-11 13:49:38] 2026-02-11 18:49:03,232 | INFO     | fitting pss+swap vs Time
[2026-02-11 13:49:38] 2026-02-11 18:49:03,232 | INFO     | sum of square deviations: 93239609.19402973
[2026-02-11 13:49:38] 2026-02-11 18:49:03,232 | INFO     | sum of deviations: -3447725568.313432
[2026-02-11 13:49:38] 2026-02-11 18:49:03,232 | INFO     | mean x: 1770833557.164179
[2026-02-11 13:49:38] 2026-02-11 18:49:03,232 | INFO     | mean y: 2611249.119402985
[2026-02-11 13:49:38] 2026-02-11 18:49:03,233 | INFO     | intersect: 65482809901.14571
[2026-02-11 13:49:38] 2026-02-11 18:49:03,233 | INFO     | chi2: 0.5788773202526348
[2026-02-11 13:49:38] 2026-02-11 18:49:03,233 | INFO     | current memory leak: -36.98 B/s (using 67 data points, chi2=0.58)
[2026-02-11 13:49:38] 2026-02-11 18:49:03,233 | INFO     | could have reported an average CPU frequency of 3791 MHz (6 samples)
[2026-02-11 13:49:38] 2026-02-11 18:49:03,233 | INFO     | ..............................
[2026-02-11 13:49:38] 2026-02-11 18:49:03,233 | INFO     | . Timing measurements:
[2026-02-11 13:49:38] 2026-02-11 18:49:03,233 | INFO     | . get job = 0 s
[2026-02-11 13:49:38] 2026-02-11 18:49:03,233 | INFO     | . initial setup = 43 s
[2026-02-11 13:49:38] 2026-02-11 18:49:03,233 | INFO     | . payload setup = 56 s
[2026-02-11 13:49:38] 2026-02-11 18:49:03,233 | INFO     | . stage-in = 0 s
[2026-02-11 13:49:38] 2026-02-11 18:49:03,233 | INFO     | . payload execution = 4531 s
[2026-02-11 13:49:38] 2026-02-11 18:49:03,233 | INFO     | . stage-out = 0 s
[2026-02-11 13:49:38] 2026-02-11 18:49:03,233 | INFO     | . log creation = 0 s
[2026-02-11 13:49:38] 2026-02-11 18:49:03,233 | INFO     | ..............................
[2026-02-11 13:49:38] 2026-02-11 18:49:03,284 | INFO     | 
[2026-02-11 13:49:38] 2026-02-11 18:49:03,284 | INFO     | job summary report
[2026-02-11 13:49:38] 2026-02-11 18:49:03,284 | INFO     | --------------------------------------------------
[2026-02-11 13:49:38] 2026-02-11 18:49:03,284 | INFO     | PanDA job id: 7008552051
[2026-02-11 13:49:38] 2026-02-11 18:49:03,284 | INFO     | task id: 48318034
[2026-02-11 13:49:38] 2026-02-11 18:49:03,284 | INFO     | errors: (none)
[2026-02-11 13:49:38] 2026-02-11 18:49:03,284 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-11 13:49:38] 2026-02-11 18:49:03,285 | INFO     | pilot state: finished 
[2026-02-11 13:49:38] 2026-02-11 18:49:03,285 | INFO     | transexitcode: 0
[2026-02-11 13:49:38] 2026-02-11 18:49:03,285 | INFO     | exeerrorcode: 0
[2026-02-11 13:49:38] 2026-02-11 18:49:03,285 | INFO     | exeerrordiag: 
[2026-02-11 13:49:38] 2026-02-11 18:49:03,285 | INFO     | exitcode: 0
[2026-02-11 13:49:38] 2026-02-11 18:49:03,285 | INFO     | exitmsg: OK
[2026-02-11 13:49:38] 2026-02-11 18:49:03,285 | INFO     | cpuconsumptiontime: 22288 s
[2026-02-11 13:49:38] 2026-02-11 18:49:03,285 | INFO     | nevents: 400
[2026-02-11 13:49:38] 2026-02-11 18:49:03,285 | INFO     | neventsw: 0
[2026-02-11 13:49:38] 2026-02-11 18:49:03,285 | INFO     | pid: 2073319
[2026-02-11 13:49:38] 2026-02-11 18:49:03,285 | INFO     | pgrp: 2073319
[2026-02-11 13:49:38] 2026-02-11 18:49:03,285 | INFO     | corecount: 8
[2026-02-11 13:49:38] 2026-02-11 18:49:03,285 | INFO     | event service: False
[2026-02-11 13:49:38] 2026-02-11 18:49:03,285 | INFO     | sizes: {0: 2281977, 1: 2282211, 4592: 2308340, 4593: 2317338, 4596: 2317394, 4599: 2317588}
[2026-02-11 13:49:38] 2026-02-11 18:49:03,285 | INFO     | --------------------------------------------------
[2026-02-11 13:49:38] 2026-02-11 18:49:03,285 | INFO     | 
[2026-02-11 13:49:38] 2026-02-11 18:49:03,285 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2026-02-11 13:49:38] 2026-02-11 18:49:03,303 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-11 13:49:38] 2026-02-11 18:49:03,304 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-11 13:49:38] 2026-02-11 18:49:03,304 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-11 13:49:38] 2026-02-11 18:49:03,304 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-11 13:49:38] 2026-02-11 18:49:03,304 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-11 13:49:38] 2026-02-11 18:49:03,304 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-11 13:49:38] 2026-02-11 18:49:03,304 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-11 13:49:38] 2026-02-11 18:49:03,304 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-11 13:49:38] 2026-02-11 18:49:03,304 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-11 13:49:38] 2026-02-11 18:49:03,304 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-11 13:49:38] 2026-02-11 18:49:03,304 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-11 13:49:38] 2026-02-11 18:49:03,304 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-11 13:49:38] 2026-02-11 18:49:03,304 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-11 13:49:38] 2026-02-11 18:49:03,304 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-11 13:49:38] 2026-02-11 18:49:03,304 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-11 13:49:38] 2026-02-11 18:49:03,304 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-11 13:49:38] 2026-02-11 18:49:03,304 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-11 13:49:38] 2026-02-11 18:49:03,304 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-11 13:49:38] 2026-02-11 18:49:03,304 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-11 13:49:38] 2026-02-11 18:49:03,304 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-11 13:49:38] 2026-02-11 18:49:03,304 | INFO     | job 7008552051 has completed (purged errors)
[2026-02-11 13:49:38] 2026-02-11 18:49:03,304 | INFO     | overall cleanup function is called
[2026-02-11 13:49:38] 2026-02-11 18:49:04,312 | INFO     | --- collectZombieJob: --- 10, [2073319]
[2026-02-11 13:49:38] 2026-02-11 18:49:04,312 | INFO     | zombie collector waiting for pid 2073319
[2026-02-11 13:49:38] 2026-02-11 18:49:04,312 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-11 13:49:38] 2026-02-11 18:49:04,312 | INFO     | collected zombie processes
[2026-02-11 13:49:38] 2026-02-11 18:49:04,312 | INFO     | will attempt to kill all subprocesses of pid=2073319
[2026-02-11 13:49:38] 2026-02-11 18:49:05,252 | INFO     | PID=2049138 has CPU usage=16.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-11 13:49:38] 2026-02-11 18:49:05,253 | INFO     | .. there are 63 such processes running
[2026-02-11 13:49:38] 2026-02-11 18:49:05,463 | INFO     | process IDs to be killed: [2073319] (in reverse order)
[2026-02-11 13:49:38] 2026-02-11 18:49:05,765 | WARNING  | found no corresponding commands to process id(s)
[2026-02-11 13:49:38] 2026-02-11 18:49:05,766 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-11 13:49:38] 2026-02-11 18:49:05,795 | INFO     | did not find any defunct processes belonging to 2073319
[2026-02-11 13:49:38] 2026-02-11 18:49:05,846 | INFO     | did not find any defunct processes belonging to 2073319
[2026-02-11 13:49:38] 2026-02-11 18:49:05,846 | INFO     | ready for new job
[2026-02-11 13:49:38] 2026-02-11 18:49:05,847 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-11 13:49:38] 2026-02-11 18:49:05,848 | INFO     | **************************************
[2026-02-11 13:49:38] 2026-02-11 18:49:05,852 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-11 13:49:38] 2026-02-11 18:49:05,852 | INFO     | **************************************
[2026-02-11 13:49:38] 2026-02-11 18:49:05,852 | INFO     | 
[2026-02-11 13:49:38] 2026-02-11 18:49:05,859 | INFO     | architecture information:
[2026-02-11 13:49:38] 2026-02-11 18:49:05,859 | INFO     | executing command: cat /etc/os-release
[2026-02-11 13:49:38] 2026-02-11 18:49:05,900 | INFO     | cat /etc/os-release:
[2026-02-11 13:49:38] NAME="CentOS Linux"
[2026-02-11 13:49:38] VERSION="7 (Core)"
[2026-02-11 13:49:38] ID="centos"
[2026-02-11 13:49:38] ID_LIKE="rhel fedora"
[2026-02-11 13:49:38] VERSION_ID="7"
[2026-02-11 13:49:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-11 13:49:38] ANSI_COLOR="0;31"
[2026-02-11 13:49:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-11 13:49:38] HOME_URL="https://www.centos.org/"
[2026-02-11 13:49:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-11 13:49:38] 
[2026-02-11 13:49:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-11 13:49:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-11 13:49:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-11 13:49:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-11 13:49:38] 
[2026-02-11 13:49:38] 2026-02-11 18:49:05,901 | INFO     | **************************************
[2026-02-11 13:49:38] 2026-02-11 18:49:06,405 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2026-02-11 13:49:38] 2026-02-11 18:49:06,450 | INFO     | sufficient remaining disk space (162990653440 B)
[2026-02-11 13:49:38] 2026-02-11 18:49:06,450 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-11 13:49:38] 2026-02-11 18:49:06,451 | INFO     | current server update state: UPDATING_FINAL
[2026-02-11 13:49:38] 2026-02-11 18:49:06,451 | INFO     | update_server=False
[2026-02-11 13:49:38] 2026-02-11 18:49:06,451 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-11 13:49:38] 2026-02-11 18:49:06,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-11 13:49:38] 2026-02-11 18:49:06,560 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-11 13:49:38] 2026-02-11 18:49:06,714 | INFO     | all payload control threads have been joined
[2026-02-11 13:49:38] 2026-02-11 18:49:06,842 | INFO     | all data control threads have been joined
[2026-02-11 13:49:38] 2026-02-11 18:49:07,375 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-11 13:49:38] 2026-02-11 18:49:07,375 | INFO     | aborting loop
[2026-02-11 13:49:38] 2026-02-11 18:49:07,456 | INFO     | [job] retrieve thread has finished
[2026-02-11 13:49:38] 2026-02-11 18:49:07,538 | INFO     | [data] copytool_in thread has finished
[2026-02-11 13:49:38] 2026-02-11 18:49:07,625 | INFO     | [payload] validate_pre thread has finished
[2026-02-11 13:49:38] 2026-02-11 18:49:07,698 | INFO     | [job] validate thread has finished
[2026-02-11 13:49:38] 2026-02-11 18:49:07,720 | INFO     | [payload] control thread has finished
[2026-02-11 13:49:38] 2026-02-11 18:49:07,859 | INFO     | [data] control thread has finished
[2026-02-11 13:49:38] 2026-02-11 18:49:07,974 | INFO     | [payload] failed_post thread has finished
[2026-02-11 13:49:38] 2026-02-11 18:49:08,105 | INFO     | all job control threads have been joined
[2026-02-11 13:49:38] 2026-02-11 18:49:08,173 | INFO     | [payload] execute_payloads thread has finished
[2026-02-11 13:49:38] 2026-02-11 18:49:08,249 | INFO     | [job] create_data_payload thread has finished
[2026-02-11 13:49:38] 2026-02-11 18:49:08,300 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-11 13:49:38] 2026-02-11 18:49:08,380 | INFO     | [job] job monitor thread has finished
[2026-02-11 13:49:38] 2026-02-11 18:49:08,459 | INFO     | [data] copytool_out thread has finished
[2026-02-11 13:49:38] 2026-02-11 18:49:08,837 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-11 13:49:38] 2026-02-11 18:49:08,958 | INFO     | [payload] validate_post thread has finished
[2026-02-11 13:49:38] 2026-02-11 18:49:09,129 | INFO     | [job] control thread has finished
[2026-02-11 13:49:38] 2026-02-11 18:49:09,306 | INFO     | [job] queue monitor thread has finished
[2026-02-11 13:49:38] 2026-02-11 18:49:10,568 | INFO     | [data] queue_monitor thread has finished
[2026-02-11 13:49:38] 2026-02-11 18:49:30,570 | INFO     | [monitor] cgroup control has ended
[2026-02-11 13:49:38] 2026-02-11 18:49:31,921 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140084193818432)>', '<ExcThread(monitor, started 140083638298368)>']
[2026-02-11 13:49:38] 2026-02-11 18:49:36,949 | INFO     | all workflow threads have been joined
[2026-02-11 13:49:38] 2026-02-11 18:49:36,949 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-11 13:49:38] 2026-02-11 18:49:36,949 | INFO     | traces error code: 0
[2026-02-11 13:49:38] 2026-02-11 18:49:36,949 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-11 13:49:38] 2026-02-11 18:49:38,218 | INFO     | PID=2049138 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-11 13:49:38] 2026-02-11 18:49:38,218 | INFO     | .. there are 62 such processes running
[2026-02-11 13:49:38] 2026-02-11 18:49:38,219 | INFO     | found 0 job(s) in 20 queues
[2026-02-11 13:49:38] 2026-02-11 18:49:38,219 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-11 13:49:38] 2026-02-11 18:49:38,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-11 13:49:38] 2026-02-11 18:49:38,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-11 13:49:38] 2026-02-11 18:49:38,219 | INFO     | [monitor] control thread has ended
[2026-02-11 13:49:38] 2026-02-11 18:49:38,336 [wrapper] ==== pilot stdout END ====
[2026-02-11 13:49:38] 2026-02-11 18:49:38,339 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-11 13:49:38] 2026-02-11 18:49:38,352 [wrapper] pilotpid: 2049138
[2026-02-11 13:49:38] 2026-02-11 18:49:38,375 [wrapper] Pilot exit status: 0
[2026-02-11 13:49:38] 2026-02-11 18:49:38,390 [wrapper] pandaids: 7008552051
[2026-02-11 13:49:38] 2026-02-11 18:49:38,548 [wrapper] cleanup supervisor_pilot 2846186 2049139
[2026-02-11 13:49:38] 2026-02-11 18:49:38,556 [wrapper] Test setup, not cleaning
[2026-02-11 13:49:38] 2026-02-11 18:49:38,568 [wrapper] apfmon messages muted
[2026-02-11 13:49:38] 2026-02-11 18:49:38,577 [wrapper] ==== wrapper stdout END ====
[2026-02-11 13:49:38] 2026-02-11 18:49:38,599 [wrapper] ==== wrapper stderr END ====
[2026-02-11 13:49:38]  *** Error codes and diagnostics ***
[2026-02-11 13:49:38]     "exeErrorCode": 0,
[2026-02-11 13:49:38]     "exeErrorDiag": "",
[2026-02-11 13:49:38]     "pilotErrorCode": 0,
[2026-02-11 13:49:38]     "pilotErrorDiag": "",
[2026-02-11 13:49:38]  *** Listing of results directory ***
[2026-02-11 13:49:38] total 670900
[2026-02-11 13:49:38] -rw-r--r--. 1 boincer umatlas    584627 Feb 11 05:53 pilot3.tar.gz
[2026-02-11 13:49:38] -rwx------. 1 boincer umatlas     36322 Feb 11 05:54 runpilot2-wrapper.sh
[2026-02-11 13:49:38] -rw-r--r--. 1 boincer umatlas      5111 Feb 11 05:56 queuedata.json
[2026-02-11 13:49:38] -rw-r--r--. 1 boincer umatlas       100 Feb 11 12:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-11 13:49:38] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 11 12:30 run_atlas
[2026-02-11 13:49:38] -rw-r--r--. 1 boincer umatlas       105 Feb 11 12:30 job.xml
[2026-02-11 13:49:38] -rw-r--r--. 2 boincer umatlas 500959307 Feb 11 12:30 EVNT.48318032._000291.pool.root.1
[2026-02-11 13:49:38] -rw-r--r--. 2 boincer umatlas     15845 Feb 11 12:30 start_atlas.sh
[2026-02-11 13:49:38] drwxrwx--x. 2 boincer umatlas      4096 Feb 11 12:30 shared
[2026-02-11 13:49:38] -rw-r--r--. 2 boincer umatlas    597960 Feb 11 12:30 input.tar.gz
[2026-02-11 13:49:38] -rw-r--r--. 1 boincer umatlas         0 Feb 11 12:30 boinc_lockfile
[2026-02-11 13:49:38] -rw-r--r--. 1 boincer umatlas      2537 Feb 11 12:30 pandaJob.out
[2026-02-11 13:49:38] -rw-------. 1 boincer umatlas        57 Feb 11 12:30 setup.sh.local
[2026-02-11 13:49:38] -rw-------. 1 boincer umatlas   1008160 Feb 11 12:31 agis_schedconf.cvmfs.json
[2026-02-11 13:49:38] -rw-------. 1 boincer umatlas   1512955 Feb 11 12:31 agis_ddmendpoints.agis.ALL.json
[2026-02-11 13:49:38] -rw-------. 1 boincer umatlas       432 Feb 11 12:32 workernode_map.json
[2026-02-11 13:49:38] drwx------. 5 boincer umatlas      4096 Feb 11 12:32 pilot3
[2026-02-11 13:49:38] -rw-r--r--. 1 boincer umatlas      7185 Feb 11 13:45 init_data.xml
[2026-02-11 13:49:38] -rw-------. 1 boincer umatlas 180228570 Feb 11 13:48 HITS.48318034._016322.pool.root.1
[2026-02-11 13:49:38] -rw-r--r--. 1 boincer umatlas       531 Feb 11 13:48 boinc_task_state.xml
[2026-02-11 13:49:38] -rw-------. 1 boincer umatlas      1036 Feb 11 13:48 memory_monitor_summary.json
[2026-02-11 13:49:38] -rw-------. 1 boincer umatlas    327364 Feb 11 13:48 log.48318034._016322.job.log.tgz.1
[2026-02-11 13:49:38] -rw-------. 1 boincer umatlas      6341 Feb 11 13:49 heartbeat.json
[2026-02-11 13:49:38] -rw-r--r--. 1 boincer umatlas      8192 Feb 11 13:49 boinc_mmap_file
[2026-02-11 13:49:38] -rw-------. 1 boincer umatlas        95 Feb 11 13:49 pilot_heartbeat.json
[2026-02-11 13:49:38] -rw-------. 1 boincer umatlas       823 Feb 11 13:49 pilotlog.txt
[2026-02-11 13:49:38] -rw-r--r--. 1 boincer umatlas        27 Feb 11 13:49 wrapper_checkpoint.txt
[2026-02-11 13:49:38] -rw-------. 1 boincer umatlas    621628 Feb 11 13:49 log.48318034._016322.job.log.1
[2026-02-11 13:49:38] -rw-------. 1 boincer umatlas       357 Feb 11 13:49 output.list
[2026-02-11 13:49:38] -rw-r--r--. 1 boincer umatlas       620 Feb 11 13:49 runtime_log
[2026-02-11 13:49:38] -rw-------. 1 boincer umatlas    962560 Feb 11 13:49 result.tar.gz
[2026-02-11 13:49:38] -rw-------. 1 boincer umatlas       652 Feb 11 13:49 XktKDms2MA9n9Rq4apOajLDm4fhM0noT9bVooX4SDmiHjKDmrPPrLo.diag
[2026-02-11 13:49:38] -rw-r--r--. 1 boincer umatlas      9341 Feb 11 13:49 runtime_log.err
[2026-02-11 13:49:38] -rw-r--r--. 1 boincer umatlas      2144 Feb 11 13:49 stderr.txt
[2026-02-11 13:49:39] HITS file was successfully produced:
[2026-02-11 13:49:39] -rw-------. 1 boincer umatlas 180228570 Feb 11 13:48 shared/HITS.pool.root.1
[2026-02-11 13:49:39]  *** Contents of shared directory: ***
[2026-02-11 13:49:39] total 666776
[2026-02-11 13:49:39] -rw-r--r--. 2 boincer umatlas 500959307 Feb 11 12:30 ATLAS.root_0
[2026-02-11 13:49:39] -rw-r--r--. 2 boincer umatlas     15845 Feb 11 12:30 start_atlas.sh
[2026-02-11 13:49:39] -rw-r--r--. 2 boincer umatlas    597960 Feb 11 12:30 input.tar.gz
[2026-02-11 13:49:39] -rw-------. 1 boincer umatlas 180228570 Feb 11 13:48 HITS.pool.root.1
[2026-02-11 13:49:39] -rw-------. 1 boincer umatlas    962560 Feb 11 13:49 result.tar.gz
13:49:40 (2030443): run_atlas exited; CPU time 22492.117616
13:49:40 (2030443): called boinc_finish(0)

</stderr_txt>
]]>

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