Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:34:22 (4031122): wrapper (7.7.26015): starting
19:34:22 (4031122): wrapper: running run_atlas (--nthreads 4)
[2026-02-12 19:34:22] Arguments: --nthreads 4
[2026-02-12 19:34:22] Threads: 4
[2026-02-12 19:34:22] Checking for CVMFS
[2026-02-12 19:34:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 19:34:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 19:34:22] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 19:34:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 19:34:23] 2.13.3.0 7641 5787 51132 156147 1 56 3235825 6144001 2733 130560 0 9628007 99.996 185042 135 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2026-02-12 19:34:23] CVMFS is ok
[2026-02-12 19:34:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 19:34:23] Checking for apptainer binary...
[2026-02-12 19:34:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 19:34:23] Running /usr/bin/apptainer --version
[2026-02-12 19:34:23] apptainer version 1.4.0
[2026-02-12 19:34:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 19:34:23] Zen
[2026-02-12 19:34:23] apptainer works
[2026-02-12 19:34:23] Set ATHENA_PROC_NUMBER=4
[2026-02-12 19:34:23] Set ATHENA_CORE_NUMBER=4
[2026-02-12 19:34:23] Starting ATLAS job with PandaID=7010071593
[2026-02-12 19:34:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 21:35:04]  *** The last 200 lines of the pilot log: ***
[2026-02-12 21:35:04] 2026-02-12 10:34:14,361 | INFO     | job 7010071593 has finished - writing final server update
[2026-02-12 21:35:04] 2026-02-12 10:34:14,361 | INFO     | total number of processed events: 400 (read)
[2026-02-12 21:35:04] 2026-02-12 10:34:14,364 | INFO     | using path: /home/michael/Boinc/BOINC/slots/1/PanDA_Pilot-7010071593/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 21:35:04] 2026-02-12 10:34:14,364 | INFO     | extracted standard info from prmon json
[2026-02-12 21:35:04] 2026-02-12 10:34:14,364 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 21:35:04] 2026-02-12 10:34:14,364 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 21:35:04] 2026-02-12 10:34:14,365 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 21:35:04] 2026-02-12 10:34:14,365 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 21:35:04] 2026-02-12 10:34:14,366 | INFO     | fitting pss+swap vs Time
[2026-02-12 21:35:04] 2026-02-12 10:34:14,366 | INFO     | sum of square deviations: 509440249.5
[2026-02-12 21:35:04] 2026-02-12 10:34:14,367 | INFO     | sum of deviations: 4443999114.499998
[2026-02-12 21:35:04] 2026-02-12 10:34:14,367 | INFO     | mean x: 1770888873.5
[2026-02-12 21:35:04] 2026-02-12 10:34:14,367 | INFO     | mean y: 2321071.7881355933
[2026-02-12 21:35:04] 2026-02-12 10:34:14,367 | INFO     | intersect: -15445670313.729391
[2026-02-12 21:35:04] 2026-02-12 10:34:14,367 | INFO     | chi2: 2.3998712378191134
[2026-02-12 21:35:04] 2026-02-12 10:34:14,367 | INFO     | sum of square deviations: 447383272.0
[2026-02-12 21:35:04] 2026-02-12 10:34:14,368 | INFO     | sum of deviations: 10882152462.0
[2026-02-12 21:35:04] 2026-02-12 10:34:14,368 | INFO     | mean x: 1770888721.0
[2026-02-12 21:35:04] 2026-02-12 10:34:14,368 | INFO     | mean y: 2336321.053097345
[2026-02-12 21:35:04] 2026-02-12 10:34:14,368 | INFO     | intersect: -43072767870.947586
[2026-02-12 21:35:04] 2026-02-12 10:34:14,368 | INFO     | chi2: 1.7545744653321047
[2026-02-12 21:35:04] 2026-02-12 10:34:14,368 | INFO     | current chi2=1.7545744653321047 (change=26.8888081292821 %)
[2026-02-12 21:35:04] 2026-02-12 10:34:14,368 | INFO     | sum of square deviations: 390582207.0
[2026-02-12 21:35:04] 2026-02-12 10:34:14,369 | INFO     | sum of deviations: 10403079598.499998
[2026-02-12 21:35:04] 2026-02-12 10:34:14,369 | INFO     | mean x: 1770888568.5
[2026-02-12 21:35:04] 2026-02-12 10:34:14,369 | INFO     | mean y: 2335034.0092592593
[2026-02-12 21:35:04] 2026-02-12 10:34:14,369 | INFO     | intersect: -47164930673.46117
[2026-02-12 21:35:04] 2026-02-12 10:34:14,369 | INFO     | chi2: 1.7587589946132773
[2026-02-12 21:35:04] 2026-02-12 10:34:14,369 | INFO     | current chi2=1.7587589946132773 (change=-0.23849254413836396 %)
[2026-02-12 21:35:04] 2026-02-12 10:34:14,369 | INFO     | right removable region: 107
[2026-02-12 21:35:04] 2026-02-12 10:34:14,369 | INFO     | sum of square deviations: 447383272.0
[2026-02-12 21:35:04] 2026-02-12 10:34:14,369 | INFO     | sum of deviations: -13145556059.0
[2026-02-12 21:35:04] 2026-02-12 10:34:14,370 | INFO     | mean x: 1770889026.0
[2026-02-12 21:35:04] 2026-02-12 10:34:14,370 | INFO     | mean y: 2363448.3008849556
[2026-02-12 21:35:04] 2026-02-12 10:34:14,370 | INFO     | intersect: 52036765319.166794
[2026-02-12 21:35:04] 2026-02-12 10:34:14,370 | INFO     | chi2: 0.776951855373675
[2026-02-12 21:35:04] 2026-02-12 10:34:14,370 | INFO     | current chi2=0.776951855373675 (change=67.62526909236468 %)
[2026-02-12 21:35:04] 2026-02-12 10:34:14,370 | INFO     | sum of square deviations: 390582207.0
[2026-02-12 21:35:04] 2026-02-12 10:34:14,370 | INFO     | sum of deviations: -8420836164.5
[2026-02-12 21:35:04] 2026-02-12 10:34:14,370 | INFO     | mean x: 1770889178.5
[2026-02-12 21:35:04] 2026-02-12 10:34:14,370 | INFO     | mean y: 2350726.5833333335
[2026-02-12 21:35:04] 2026-02-12 10:34:14,371 | INFO     | intersect: 38182194483.86565
[2026-02-12 21:35:04] 2026-02-12 10:34:14,371 | INFO     | chi2: 0.7361614824078332
[2026-02-12 21:35:04] 2026-02-12 10:34:14,371 | INFO     | current chi2=0.7361614824078332 (change=5.250051555153778 %)
[2026-02-12 21:35:04] 2026-02-12 10:34:14,371 | INFO     | left removable region: 20
[2026-02-12 21:35:04] 2026-02-12 10:34:14,371 | INFO     | sum of square deviations: 204163828.0
[2026-02-12 21:35:04] 2026-02-12 10:34:14,371 | INFO     | sum of deviations: 524564680.99999994
[2026-02-12 21:35:04] 2026-02-12 10:34:14,371 | INFO     | mean x: 1770889148.0
[2026-02-12 21:35:04] 2026-02-12 10:34:14,371 | INFO     | mean y: 2360471.6091954024
[2026-02-12 21:35:04] 2026-02-12 10:34:14,371 | INFO     | intersect: -4547641897.110995
[2026-02-12 21:35:04] 2026-02-12 10:34:14,371 | INFO     | chi2: 0.0002168545046295424
[2026-02-12 21:35:04] 2026-02-12 10:34:14,372 | INFO     | current memory leak: 2.57 B/s (using 87 data points, chi2=0.00)
[2026-02-12 21:35:04] 2026-02-12 10:34:14,372 | INFO     | could have reported an average CPU frequency of 4375 MHz (7 samples)
[2026-02-12 21:35:04] 2026-02-12 10:34:14,372 | INFO     | ..............................
[2026-02-12 21:35:04] 2026-02-12 10:34:14,372 | INFO     | . Timing measurements:
[2026-02-12 21:35:04] 2026-02-12 10:34:14,372 | INFO     | . get job = 0 s
[2026-02-12 21:35:04] 2026-02-12 10:34:14,372 | INFO     | . initial setup = 8 s
[2026-02-12 21:35:04] 2026-02-12 10:34:14,372 | INFO     | . payload setup = 3 s
[2026-02-12 21:35:04] 2026-02-12 10:34:14,372 | INFO     | . stage-in = 0 s
[2026-02-12 21:35:04] 2026-02-12 10:34:14,372 | INFO     | . payload execution = 7147 s
[2026-02-12 21:35:04] 2026-02-12 10:34:14,372 | INFO     | . stage-out = 0 s
[2026-02-12 21:35:04] 2026-02-12 10:34:14,372 | INFO     | . log creation = 0 s
[2026-02-12 21:35:04] 2026-02-12 10:34:14,372 | INFO     | ..............................
[2026-02-12 21:35:04] 2026-02-12 10:34:14,769 | INFO     | 
[2026-02-12 21:35:04] 2026-02-12 10:34:14,769 | INFO     | job summary report
[2026-02-12 21:35:04] 2026-02-12 10:34:14,769 | INFO     | --------------------------------------------------
[2026-02-12 21:35:04] 2026-02-12 10:34:14,769 | INFO     | PanDA job id: 7010071593
[2026-02-12 21:35:04] 2026-02-12 10:34:14,769 | INFO     | task id: 48431096
[2026-02-12 21:35:04] 2026-02-12 10:34:14,769 | INFO     | errors: (none)
[2026-02-12 21:35:04] 2026-02-12 10:34:14,769 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 21:35:04] 2026-02-12 10:34:14,769 | INFO     | pilot state: finished 
[2026-02-12 21:35:04] 2026-02-12 10:34:14,769 | INFO     | transexitcode: 0
[2026-02-12 21:35:04] 2026-02-12 10:34:14,769 | INFO     | exeerrorcode: 0
[2026-02-12 21:35:04] 2026-02-12 10:34:14,769 | INFO     | exeerrordiag: 
[2026-02-12 21:35:04] 2026-02-12 10:34:14,769 | INFO     | exitcode: 0
[2026-02-12 21:35:04] 2026-02-12 10:34:14,770 | INFO     | exitmsg: OK
[2026-02-12 21:35:04] 2026-02-12 10:34:14,770 | INFO     | cpuconsumptiontime: 27367 s
[2026-02-12 21:35:04] 2026-02-12 10:34:14,770 | INFO     | nevents: 400
[2026-02-12 21:35:04] 2026-02-12 10:34:14,770 | INFO     | neventsw: 0
[2026-02-12 21:35:04] 2026-02-12 10:34:14,770 | INFO     | pid: 4039810
[2026-02-12 21:35:04] 2026-02-12 10:34:14,770 | INFO     | pgrp: 4039810
[2026-02-12 21:35:04] 2026-02-12 10:34:14,770 | INFO     | corecount: 4
[2026-02-12 21:35:04] 2026-02-12 10:34:14,770 | INFO     | event service: False
[2026-02-12 21:35:04] 2026-02-12 10:34:14,770 | INFO     | sizes: {0: 2281791, 1: 2282252, 11: 2282252, 7154: 2309664, 7155: 2318740, 7156: 2318878}
[2026-02-12 21:35:04] 2026-02-12 10:34:14,770 | INFO     | --------------------------------------------------
[2026-02-12 21:35:04] 2026-02-12 10:34:14,770 | INFO     | 
[2026-02-12 21:35:04] 2026-02-12 10:34:14,770 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/1
[2026-02-12 21:35:04] 2026-02-12 10:34:14,787 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 21:35:04] 2026-02-12 10:34:14,787 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 21:35:04] 2026-02-12 10:34:14,787 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 21:35:04] 2026-02-12 10:34:14,787 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 21:35:04] 2026-02-12 10:34:14,787 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 21:35:04] 2026-02-12 10:34:14,787 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 21:35:04] 2026-02-12 10:34:14,787 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 21:35:04] 2026-02-12 10:34:14,787 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 21:35:04] 2026-02-12 10:34:14,788 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 21:35:04] 2026-02-12 10:34:14,788 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 21:35:04] 2026-02-12 10:34:14,788 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 21:35:04] 2026-02-12 10:34:14,788 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 21:35:04] 2026-02-12 10:34:14,788 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 21:35:04] 2026-02-12 10:34:14,788 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 21:35:04] 2026-02-12 10:34:14,788 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 21:35:04] 2026-02-12 10:34:14,788 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 21:35:04] 2026-02-12 10:34:14,788 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 21:35:04] 2026-02-12 10:34:14,788 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 21:35:04] 2026-02-12 10:34:14,788 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 21:35:04] 2026-02-12 10:34:14,788 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 21:35:04] 2026-02-12 10:34:14,788 | INFO     | job 7010071593 has completed (purged errors)
[2026-02-12 21:35:04] 2026-02-12 10:34:14,788 | INFO     | overall cleanup function is called
[2026-02-12 21:35:04] 2026-02-12 10:34:15,796 | INFO     | --- collectZombieJob: --- 10, [4039810]
[2026-02-12 21:35:04] 2026-02-12 10:34:15,796 | INFO     | zombie collector waiting for pid 4039810
[2026-02-12 21:35:04] 2026-02-12 10:34:15,796 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 21:35:04] 2026-02-12 10:34:15,796 | INFO     | collected zombie processes
[2026-02-12 21:35:04] 2026-02-12 10:34:15,796 | INFO     | will attempt to kill all subprocesses of pid=4039810
[2026-02-12 21:35:04] 2026-02-12 10:34:15,954 | INFO     | process IDs to be killed: [4039810] (in reverse order)
[2026-02-12 21:35:04] 2026-02-12 10:34:16,008 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 21:35:04] 2026-02-12 10:34:16,008 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 21:35:04] 2026-02-12 10:34:16,012 | INFO     | did not find any defunct processes belonging to 4039810
[2026-02-12 21:35:04] 2026-02-12 10:34:16,015 | INFO     | did not find any defunct processes belonging to 4039810
[2026-02-12 21:35:04] 2026-02-12 10:34:16,015 | INFO     | ready for new job
[2026-02-12 21:35:04] 2026-02-12 10:34:16,015 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 21:35:04] 2026-02-12 10:34:16,017 | INFO     | **************************************
[2026-02-12 21:35:04] 2026-02-12 10:34:16,017 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 21:35:04] 2026-02-12 10:34:16,017 | INFO     | **************************************
[2026-02-12 21:35:04] 2026-02-12 10:34:16,017 | INFO     | 
[2026-02-12 21:35:04] 2026-02-12 10:34:16,018 | INFO     | architecture information:
[2026-02-12 21:35:04] 2026-02-12 10:34:16,018 | INFO     | executing command: cat /etc/os-release
[2026-02-12 21:35:04] 2026-02-12 10:34:16,031 | INFO     | cat /etc/os-release:
[2026-02-12 21:35:04] NAME="CentOS Linux"
[2026-02-12 21:35:04] VERSION="7 (Core)"
[2026-02-12 21:35:04] ID="centos"
[2026-02-12 21:35:04] ID_LIKE="rhel fedora"
[2026-02-12 21:35:04] VERSION_ID="7"
[2026-02-12 21:35:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 21:35:04] ANSI_COLOR="0;31"
[2026-02-12 21:35:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 21:35:04] HOME_URL="https://www.centos.org/"
[2026-02-12 21:35:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 21:35:04] 
[2026-02-12 21:35:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 21:35:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 21:35:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 21:35:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 21:35:04] 
[2026-02-12 21:35:04] 2026-02-12 10:34:16,031 | INFO     | **************************************
[2026-02-12 21:35:04] 2026-02-12 10:34:16,534 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/1
[2026-02-12 21:35:04] 2026-02-12 10:34:16,547 | INFO     | sufficient remaining disk space (189396942848 B)
[2026-02-12 21:35:04] 2026-02-12 10:34:16,547 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 21:35:04] 2026-02-12 10:34:16,547 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 21:35:04] 2026-02-12 10:34:16,548 | INFO     | update_server=False
[2026-02-12 21:35:04] 2026-02-12 10:34:16,548 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 21:35:04] 2026-02-12 10:34:16,548 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 21:35:04] 2026-02-12 10:34:16,916 | INFO     | all data control threads have been joined
[2026-02-12 21:35:04] 2026-02-12 10:34:17,018 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 21:35:04] 2026-02-12 10:34:17,018 | INFO     | aborting loop
[2026-02-12 21:35:04] 2026-02-12 10:34:17,097 | INFO     | all payload control threads have been joined
[2026-02-12 21:35:04] 2026-02-12 10:34:17,530 | INFO     | all job control threads have been joined
[2026-02-12 21:35:04] 2026-02-12 10:34:17,549 | INFO     | [job] retrieve thread has finished
[2026-02-12 21:35:04] 2026-02-12 10:34:17,630 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 21:35:04] 2026-02-12 10:34:17,857 | INFO     | [data] copytool_in thread has finished
[2026-02-12 21:35:04] 2026-02-12 10:34:17,921 | INFO     | [data] control thread has finished
[2026-02-12 21:35:04] 2026-02-12 10:34:18,023 | INFO     | [job] job monitor thread has finished
[2026-02-12 21:35:04] 2026-02-12 10:34:18,102 | INFO     | [payload] control thread has finished
[2026-02-12 21:35:04] 2026-02-12 10:34:18,184 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 21:35:04] 2026-02-12 10:34:18,532 | INFO     | [payload] validate_post thread has finished
[2026-02-12 21:35:04] 2026-02-12 10:34:18,535 | INFO     | [job] control thread has finished
[2026-02-12 21:35:04] 2026-02-12 10:34:18,553 | INFO     | [data] copytool_out thread has finished
[2026-02-12 21:35:04] 2026-02-12 10:34:18,840 | INFO     | [job] validate thread has finished
[2026-02-12 21:35:04] 2026-02-12 10:34:18,915 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 21:35:04] 2026-02-12 10:34:19,017 | INFO     | [payload] failed_post thread has finished
[2026-02-12 21:35:04] 2026-02-12 10:34:19,362 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 21:35:04] 2026-02-12 10:34:19,438 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 21:35:04] 2026-02-12 10:34:20,438 | INFO     | [job] queue monitor thread has finished
[2026-02-12 21:35:04] 2026-02-12 10:34:23,368 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 21:35:04] 2026-02-12 10:34:26,667 | INFO     | job.realtimelogging is not enabled
[2026-02-12 21:35:04] 2026-02-12 10:34:27,672 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 21:35:04] 2026-02-12 10:34:37,962 [wrapper] supervise_pilot (15 min periods counter: 9)
[2026-02-12 21:35:04] 2026-02-12 10:34:46,222 | INFO     | PID=4035215 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-12 21:35:04] 2026-02-12 10:34:46,222 | INFO     | .. there are 4 such processes running
[2026-02-12 21:35:04] 2026-02-12 10:34:46,222 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 21:35:04] 2026-02-12 10:34:46,222 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 21:35:04] 2026-02-12 10:34:46,223 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 21:35:04] 2026-02-12 10:34:57,854 | INFO     | [monitor] cgroup control has ended
[2026-02-12 21:35:04] 2026-02-12 10:34:59,751 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138155430676288)>', '<ExcThread(monitor, started 138154669504256)>']
[2026-02-12 21:35:04] 2026-02-12 10:35:00,286 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 21:35:04] 2026-02-12 10:35:00,286 | INFO     | [monitor] control thread has ended
[2026-02-12 21:35:04] 2026-02-12 10:35:04,776 | INFO     | all workflow threads have been joined
[2026-02-12 21:35:04] 2026-02-12 10:35:04,776 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 21:35:04] 2026-02-12 10:35:04,777 | INFO     | traces error code: 0
[2026-02-12 21:35:04] 2026-02-12 10:35:04,777 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 21:35:04] 2026-02-12 10:35:04,858 [wrapper] ==== pilot stdout END ====
[2026-02-12 21:35:04] 2026-02-12 10:35:04,860 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 21:35:04] 2026-02-12 10:35:04,862 [wrapper] pilotpid: 4035215
[2026-02-12 21:35:04] 2026-02-12 10:35:04,864 [wrapper] Pilot exit status: 0
[2026-02-12 21:35:04] 2026-02-12 10:35:04,871 [wrapper] pandaids: 7010071593
[2026-02-12 21:35:04] 2026-02-12 10:35:04,906 [wrapper] cleanup supervisor_pilot 4099828 4035216
[2026-02-12 21:35:04] 2026-02-12 10:35:04,908 [wrapper] Test setup, not cleaning
[2026-02-12 21:35:04] 2026-02-12 10:35:04,910 [wrapper] apfmon messages muted
[2026-02-12 21:35:04] 2026-02-12 10:35:04,912 [wrapper] ==== wrapper stdout END ====
[2026-02-12 21:35:04] 2026-02-12 10:35:04,914 [wrapper] ==== wrapper stderr END ====
[2026-02-12 21:35:04]  *** Error codes and diagnostics ***
[2026-02-12 21:35:04]     "exeErrorCode": 0,
[2026-02-12 21:35:04]     "exeErrorDiag": "",
[2026-02-12 21:35:04]     "pilotErrorCode": 0,
[2026-02-12 21:35:04]     "pilotErrorDiag": "",
[2026-02-12 21:35:04]  *** Listing of results directory ***
[2026-02-12 21:35:04] total 944316
[2026-02-12 21:35:04] -rw-r--r-- 1 michael michael    584627 Feb 10 18:15 pilot3.tar.gz
[2026-02-12 21:35:04] -rwx------ 1 michael michael     36322 Feb 10 18:16 runpilot2-wrapper.sh
[2026-02-12 21:35:04] -rw-r--r-- 1 michael michael      5111 Feb 10 18:18 queuedata.json
[2026-02-12 21:35:04] -rw-rw-r-- 1 michael michael       100 Feb 12 19:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 21:35:04] -rwxr-xr-x 1 michael michael      7986 Feb 12 19:34 run_atlas
[2026-02-12 21:35:04] -rw-rw-r-- 1 michael michael       105 Feb 12 19:34 job.xml
[2026-02-12 21:35:04] -rw-r--r-- 2 michael michael 678465929 Feb 12 19:34 EVNT.48431094._000518.pool.root.1
[2026-02-12 21:35:04] -rw-rw-r-- 1 michael michael      9823 Feb 12 19:34 init_data.xml
[2026-02-12 21:35:04] drwxrwx--x 2 michael michael      4096 Feb 12 19:34 shared
[2026-02-12 21:35:04] -rw-r--r-- 2 michael michael    597957 Feb 12 19:34 input.tar.gz
[2026-02-12 21:35:04] -rw-r--r-- 2 michael michael     15845 Feb 12 19:34 start_atlas.sh
[2026-02-12 21:35:04] -rw-rw-r-- 1 michael michael         0 Feb 12 19:34 boinc_lockfile
[2026-02-12 21:35:04] -rw-rw-r-- 1 michael michael      2555 Feb 12 19:34 pandaJob.out
[2026-02-12 21:35:04] -rw------- 1 michael michael        50 Feb 12 19:34 setup.sh.local
[2026-02-12 21:35:04] -rw------- 1 michael michael   1000188 Feb 12 19:34 agis_schedconf.cvmfs.json
[2026-02-12 21:35:04] -rw------- 1 michael michael   1512955 Feb 12 19:34 agis_ddmendpoints.agis.ALL.json
[2026-02-12 21:35:04] -rw------- 1 michael michael       417 Feb 12 19:34 workernode_map.json
[2026-02-12 21:35:04] drwx------ 5 michael michael      4096 Feb 12 19:34 pilot3
[2026-02-12 21:35:04] -rw------- 1 michael michael 281881269 Feb 12 21:33 HITS.48431096._023696.pool.root.1
[2026-02-12 21:35:04] -rw-rw-r-- 1 michael michael       530 Feb 12 21:33 boinc_task_state.xml
[2026-02-12 21:35:04] -rw------- 1 michael michael      1038 Feb 12 21:34 memory_monitor_summary.json
[2026-02-12 21:35:04] -rw------- 1 michael michael    292713 Feb 12 21:34 log.48431096._023696.job.log.tgz.1
[2026-02-12 21:35:04] -rw------- 1 michael michael      6269 Feb 12 21:34 heartbeat.json
[2026-02-12 21:35:04] -rw------- 1 michael michael        95 Feb 12 21:34 pilot_heartbeat.json
[2026-02-12 21:35:04] -rw-rw-r-- 1 michael michael      8192 Feb 12 21:34 boinc_mmap_file
[2026-02-12 21:35:04] -rw-rw-r-- 1 michael michael        27 Feb 12 21:34 wrapper_checkpoint.txt
[2026-02-12 21:35:04] -rw------- 1 michael michael      4903 Feb 12 21:35 pilotlog.txt
[2026-02-12 21:35:04] -rw------- 1 michael michael   1052339 Feb 12 21:35 log.48431096._023696.job.log.1
[2026-02-12 21:35:04] -rw------- 1 michael michael       357 Feb 12 21:35 output.list
[2026-02-12 21:35:04] -rw-rw-r-- 1 michael michael       620 Feb 12 21:35 runtime_log
[2026-02-12 21:35:04] -rw------- 1 michael michael   1361920 Feb 12 21:35 result.tar.gz
[2026-02-12 21:35:04] -rw-rw-r-- 1 michael michael      9444 Feb 12 21:35 runtime_log.err
[2026-02-12 21:35:04] -rw------- 1 michael michael       641 Feb 12 21:35 a7WKDmbAx98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm3lhKDmQgtXim.diag
[2026-02-12 21:35:04] -rw-rw-r-- 1 michael michael     20715 Feb 12 21:35 stderr.txt
[2026-02-12 21:35:04] HITS file was successfully produced:
[2026-02-12 21:35:04] -rw------- 1 michael michael 281881269 Feb 12 21:33 shared/HITS.pool.root.1
[2026-02-12 21:35:04]  *** Contents of shared directory: ***
[2026-02-12 21:35:04] total 939784
[2026-02-12 21:35:04] -rw-r--r-- 2 michael michael 678465929 Feb 12 19:34 ATLAS.root_0
[2026-02-12 21:35:04] -rw-r--r-- 2 michael michael    597957 Feb 12 19:34 input.tar.gz
[2026-02-12 21:35:04] -rw-r--r-- 2 michael michael     15845 Feb 12 19:34 start_atlas.sh
[2026-02-12 21:35:04] -rw------- 1 michael michael 281881269 Feb 12 21:33 HITS.pool.root.1
[2026-02-12 21:35:04] -rw------- 1 michael michael   1361920 Feb 12 21:35 result.tar.gz
21:35:06 (4031122): run_atlas exited; CPU time 27454.410427
21:35:06 (4031122): called boinc_finish(0)

</stderr_txt>
]]>

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