Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:28:08 (433367): wrapper (7.7.26015): starting
03:28:08 (433367): wrapper: running run_atlas (--nthreads 4)
[2026-02-12 03:28:08] Arguments: --nthreads 4
[2026-02-12 03:28:08] Threads: 4
[2026-02-12 03:28:08] Checking for CVMFS
[2026-02-12 03:28:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 03:28:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 03:28:08] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 03:28:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 03:28:08] 2.9.2.0 3999095 3676 94172 156136 3 50 25695321 36864001 0 130560 0 1830561 99.987 115668 2234 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-12 03:28:08] CVMFS is ok
[2026-02-12 03:28:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-12 03:28:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-12 03:28:08] Further information can be found at the LHC@home message board.
[2026-02-12 03:28:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 03:28:08] Checking for apptainer binary...
[2026-02-12 03:28:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 03:28:08] Running /usr/bin/apptainer --version
[2026-02-12 03:28:08] apptainer version 1.4.1-1.1
[2026-02-12 03:28:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 03:28:08] thA369a
[2026-02-12 03:28:08] apptainer works
[2026-02-12 03:28:08] Set ATHENA_PROC_NUMBER=4
[2026-02-12 03:28:08] Set ATHENA_CORE_NUMBER=4
[2026-02-12 03:28:08] Starting ATLAS job with PandaID=7008481043
[2026-02-12 03:28:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 04:34:38]  *** The last 200 lines of the pilot log: ***
[2026-02-12 04:34:38] 2026-02-12 03:34:07,065 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 04:34:38] 2026-02-12 03:34:07,067 | INFO     | did not find any defunct processes belonging to 441953
[2026-02-12 04:34:38] 2026-02-12 03:34:07,068 | INFO     | did not find any defunct processes belonging to 441953
[2026-02-12 04:34:38] 2026-02-12 03:34:07,069 | INFO     | ready for new job
[2026-02-12 04:34:38] 2026-02-12 03:34:07,069 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 04:34:38] 2026-02-12 03:34:07,069 | INFO     | **************************************
[2026-02-12 04:34:38] 2026-02-12 03:34:07,070 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 04:34:38] 2026-02-12 03:34:07,070 | INFO     | **************************************
[2026-02-12 04:34:38] 2026-02-12 03:34:07,070 | INFO     | 
[2026-02-12 04:34:38] 2026-02-12 03:34:07,070 | INFO     | architecture information:
[2026-02-12 04:34:38] 2026-02-12 03:34:07,070 | INFO     | executing command: cat /etc/os-release
[2026-02-12 04:34:38] 2026-02-12 03:34:07,080 | INFO     | cat /etc/os-release:
[2026-02-12 04:34:38] NAME="CentOS Linux"
[2026-02-12 04:34:38] VERSION="7 (Core)"
[2026-02-12 04:34:38] ID="centos"
[2026-02-12 04:34:38] ID_LIKE="rhel fedora"
[2026-02-12 04:34:38] VERSION_ID="7"
[2026-02-12 04:34:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 04:34:38] ANSI_COLOR="0;31"
[2026-02-12 04:34:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 04:34:38] HOME_URL="https://www.centos.org/"
[2026-02-12 04:34:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 04:34:38] 
[2026-02-12 04:34:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 04:34:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 04:34:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 04:34:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 04:34:38] 
[2026-02-12 04:34:38] 2026-02-12 03:34:07,080 | INFO     | **************************************
[2026-02-12 04:34:38] 2026-02-12 03:34:07,583 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-12 04:34:38] 2026-02-12 03:34:07,595 | INFO     | sufficient remaining disk space (229614026752 B)
[2026-02-12 04:34:38] 2026-02-12 03:34:07,595 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 04:34:38] 2026-02-12 03:34:07,596 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 04:34:38] 2026-02-12 03:34:07,596 | INFO     | update_server=False
[2026-02-12 04:34:38] 2026-02-12 03:34:07,596 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 04:34:38] 2026-02-12 03:34:07,596 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 04:34:38] 2026-02-12 03:34:07,596 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 04:34:38] 2026-02-12 03:34:07,596 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 04:34:38] 2026-02-12 03:34:07,703 | INFO     | all payload control threads have been joined
[2026-02-12 04:34:38] 2026-02-12 03:34:07,759 | INFO     | all job control threads have been joined
[2026-02-12 04:34:38] 2026-02-12 03:34:08,424 | WARNING  | process 441953 can no longer be monitored (due to stat problems) - aborting
[2026-02-12 04:34:38] 2026-02-12 03:34:08,454 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 04:34:38] 2026-02-12 03:34:08,491 | INFO     | number of running child processes to parent process 441953: 1
[2026-02-12 04:34:38] 2026-02-12 03:34:08,491 | INFO     | maximum number of monitored processes: 6
[2026-02-12 04:34:38] 2026-02-12 03:34:08,491 | INFO     | aborting job monitoring since job object (job id=7008481043) has expired
[2026-02-12 04:34:38] 2026-02-12 03:34:08,491 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 04:34:38] 2026-02-12 03:34:08,491 | INFO     | will abort loop
[2026-02-12 04:34:38] 2026-02-12 03:34:08,568 | INFO     | all data control threads have been joined
[2026-02-12 04:34:38] 2026-02-12 03:34:08,601 | INFO     | [job] retrieve thread has finished
[2026-02-12 04:34:38] 2026-02-12 03:34:08,601 | INFO     | [job] queue monitor thread has finished
[2026-02-12 04:34:38] 2026-02-12 03:34:08,618 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 04:34:38] 2026-02-12 03:34:08,708 | INFO     | [payload] control thread has finished
[2026-02-12 04:34:38] 2026-02-12 03:34:08,742 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 04:34:38] 2026-02-12 03:34:08,746 | INFO     | [data] copytool_in thread has finished
[2026-02-12 04:34:38] 2026-02-12 03:34:08,764 | INFO     | [job] control thread has finished
[2026-02-12 04:34:38] 2026-02-12 03:34:09,131 | INFO     | [payload] failed_post thread has finished
[2026-02-12 04:34:38] 2026-02-12 03:34:09,497 | INFO     | [job] job monitor thread has finished
[2026-02-12 04:34:38] 2026-02-12 03:34:09,574 | INFO     | [data] control thread has finished
[2026-02-12 04:34:38] 2026-02-12 03:34:09,602 | INFO     | [data] copytool_out thread has finished
[2026-02-12 04:34:38] 2026-02-12 03:34:09,655 | INFO     | [payload] validate_post thread has finished
[2026-02-12 04:34:38] 2026-02-12 03:34:09,977 | INFO     | [job] validate thread has finished
[2026-02-12 04:34:38] 2026-02-12 03:34:10,072 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 04:34:38] 2026-02-12 03:34:11,603 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 04:34:38] 2026-02-12 03:34:17,834 | INFO     | job.realtimelogging is not enabled
[2026-02-12 04:34:38] 2026-02-12 03:34:18,840 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 04:34:38] 2026-02-12 03:34:23,852 | INFO     | [monitor] cgroup control has ended
[2026-02-12 04:34:38] 2026-02-12 03:34:23,997 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139711139043136)>', '<ExcThread(monitor, started 139710513014528)>']
[2026-02-12 04:34:38] 2026-02-12 03:34:29,023 | INFO     | all workflow threads have been joined
[2026-02-12 04:34:38] 2026-02-12 03:34:29,023 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 04:34:38] 2026-02-12 03:34:29,023 | INFO     | traces error code: 0
[2026-02-12 04:34:38] 2026-02-12 03:34:29,023 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 04:34:38] 2026-02-12 03:34:38,236 | INFO     | PID=437459 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-12 04:34:38] 2026-02-12 03:34:38,237 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 04:34:38] 2026-02-12 03:34:38,237 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 04:34:38] 2026-02-12 03:34:38,237 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 04:34:38] 2026-02-12 03:34:38,237 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 04:34:38] 2026-02-12 03:34:38,237 | CRITICAL | thread 'MainThread' is not alive
[2026-02-12 04:34:38] 2026-02-12 03:34:38,237 | INFO     | [monitor] control thread has ended
[2026-02-12 04:34:38] 2026-02-12 03:34:38,289 [wrapper] ==== pilot stdout END ====
[2026-02-12 04:34:38] 2026-02-12 03:34:38,292 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 04:34:38] 2026-02-12 03:34:38,294 [wrapper] pilotpid: 437459
[2026-02-12 04:34:38] 2026-02-12 03:34:38,296 [wrapper] Pilot exit status: 0
[2026-02-12 04:34:38] 2026-02-12 03:34:38,304 [wrapper] pandaids: 7008481043
[2026-02-12 04:34:38] 2026-02-12 03:34:38,320 [wrapper] cleanup supervisor_pilot  446752 437460
[2026-02-12 04:34:38] 2026-02-12 03:34:38,322 [wrapper] Test setup, not cleaning
[2026-02-12 04:34:38] 2026-02-12 03:34:38,325 [wrapper] apfmon messages muted
[2026-02-12 04:34:38] 2026-02-12 03:34:38,327 [wrapper] ==== wrapper stdout END ====
[2026-02-12 04:34:38] 2026-02-12 03:34:38,329 [wrapper] ==== wrapper stderr END ====
[2026-02-12 04:34:38]  *** Error codes and diagnostics ***
[2026-02-12 04:34:38]     "exeErrorCode": 0,
[2026-02-12 04:34:38]     "exeErrorDiag": "",
[2026-02-12 04:34:38]     "pilotErrorCode": 0,
[2026-02-12 04:34:38]     "pilotErrorDiag": "",
[2026-02-12 04:34:38]  *** Listing of results directory ***
[2026-02-12 04:34:38] total 666520
[2026-02-12 04:34:38] -rw-r--r-- 1 boinc boinc    584627 Feb 11 08:46 pilot3.tar.gz
[2026-02-12 04:34:38] -rwx------ 1 boinc boinc     36322 Feb 11 08:47 runpilot2-wrapper.sh
[2026-02-12 04:34:38] -rw-r--r-- 1 boinc boinc      5111 Feb 11 08:48 queuedata.json
[2026-02-12 04:34:38] -rw-r--r-- 1 boinc boinc       100 Feb 12 03:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 04:34:38] -rwxr-xr-x 1 boinc boinc      7986 Feb 12 03:28 run_atlas
[2026-02-12 04:34:38] -rw-r--r-- 1 boinc boinc       105 Feb 12 03:28 job.xml
[2026-02-12 04:34:38] -rw-r--r-- 2 boinc boinc 493964305 Feb 12 03:28 EVNT.48318016._000166.pool.root.1
[2026-02-12 04:34:38] -rw-r--r-- 2 boinc boinc    597948 Feb 12 03:28 input.tar.gz
[2026-02-12 04:34:38] -rw-r--r-- 2 boinc boinc     15845 Feb 12 03:28 start_atlas.sh
[2026-02-12 04:34:38] drwxrwx--x 2 boinc boinc      4096 Feb 12 03:28 shared
[2026-02-12 04:34:38] -rw-r--r-- 1 boinc boinc         0 Feb 12 03:28 boinc_setup_complete
[2026-02-12 04:34:38] -rw-r--r-- 1 boinc boinc      6443 Feb 12 03:28 init_data.xml
[2026-02-12 04:34:38] -rw-r--r-- 1 boinc boinc         0 Feb 12 03:28 boinc_lockfile
[2026-02-12 04:34:38] -rw-r--r-- 1 boinc boinc      2521 Feb 12 03:28 pandaJob.out
[2026-02-12 04:34:38] -rw------- 1 boinc boinc   1005065 Feb 12 03:28 agis_schedconf.cvmfs.json
[2026-02-12 04:34:38] -rw------- 1 boinc boinc   1512955 Feb 12 03:28 agis_ddmendpoints.agis.ALL.json
[2026-02-12 04:34:38] -rw------- 1 boinc boinc       424 Feb 12 03:28 workernode_map.json
[2026-02-12 04:34:38] drwx------ 5 boinc boinc      4096 Feb 12 03:28 pilot3
[2026-02-12 04:34:38] -rw------- 1 boinc boinc 182905367 Feb 12 04:33 HITS.48318018._008451.pool.root.1
[2026-02-12 04:34:38] -rw-r--r-- 1 boinc boinc       530 Feb 12 04:33 boinc_task_state.xml
[2026-02-12 04:34:38] -rw------- 1 boinc boinc      1016 Feb 12 04:34 memory_monitor_summary.json
[2026-02-12 04:34:38] -rw------- 1 boinc boinc    270474 Feb 12 04:34 log.48318018._008451.job.log.tgz.1
[2026-02-12 04:34:38] -rw------- 1 boinc boinc      6302 Feb 12 04:34 heartbeat.json
[2026-02-12 04:34:38] -rw-r--r-- 1 boinc boinc        27 Feb 12 04:34 wrapper_checkpoint.txt
[2026-02-12 04:34:38] -rw-r--r-- 1 boinc boinc      8192 Feb 12 04:34 boinc_mmap_file
[2026-02-12 04:34:38] -rw------- 1 boinc boinc       816 Feb 12 04:34 pilotlog.txt
[2026-02-12 04:34:38] -rw------- 1 boinc boinc        95 Feb 12 04:34 pilot_heartbeat.json
[2026-02-12 04:34:38] -rw------- 1 boinc boinc    589932 Feb 12 04:34 log.48318018._008451.job.log.1
[2026-02-12 04:34:38] -rw------- 1 boinc boinc       357 Feb 12 04:34 output.list
[2026-02-12 04:34:38] -rw-r--r-- 1 boinc boinc       620 Feb 12 04:34 runtime_log
[2026-02-12 04:34:38] -rw------- 1 boinc boinc    880640 Feb 12 04:34 result.tar.gz
[2026-02-12 04:34:38] -rw-r--r-- 1 boinc boinc      8901 Feb 12 04:34 runtime_log.err
[2026-02-12 04:34:38] -rw------- 1 boinc boinc       658 Feb 12 04:34 DVJMDme7JA9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmOujKDmkZ0aLn.diag
[2026-02-12 04:34:38] -rw-r--r-- 1 boinc boinc     10671 Feb 12 04:34 stderr.txt
[2026-02-12 04:34:38] HITS file was successfully produced:
[2026-02-12 04:34:38] -rw------- 1 boinc boinc 182905367 Feb 12 04:33 shared/HITS.pool.root.1
[2026-02-12 04:34:38]  *** Contents of shared directory: ***
[2026-02-12 04:34:38] total 662476
[2026-02-12 04:34:38] -rw-r--r-- 2 boinc boinc 493964305 Feb 12 03:28 ATLAS.root_0
[2026-02-12 04:34:38] -rw-r--r-- 2 boinc boinc    597948 Feb 12 03:28 input.tar.gz
[2026-02-12 04:34:38] -rw-r--r-- 2 boinc boinc     15845 Feb 12 03:28 start_atlas.sh
[2026-02-12 04:34:38] -rw------- 1 boinc boinc 182905367 Feb 12 04:33 HITS.pool.root.1
[2026-02-12 04:34:38] -rw------- 1 boinc boinc    880640 Feb 12 04:34 result.tar.gz
04:34:39 (433367): run_atlas exited; CPU time 14736.351699
04:34:39 (433367): called boinc_finish(0)

</stderr_txt>
]]>

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