Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-12 04:00:49 (27191): vboxwrapper version 26210
2026-02-12 04:00:49 (27191): BOINC client version: 8.2.8
2026-02-12 04:00:49 (27191): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2026-02-12 04:00:49 (27191): Successfully copied 'init_data.xml' to the shared directory.
2026-02-12 04:00:49 (27191): Create VM. (boinc_bc78624a7d56547b, slot#0)
2026-02-12 04:00:49 (27191): Setting Memory Size for VM. (4400MB)
2026-02-12 04:00:49 (27191): Setting CPU Count for VM. (4)
2026-02-12 04:00:50 (27191): Setting Chipset Options for VM.
2026-02-12 04:00:50 (27191): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-12 04:00:50 (27191): Setting Boot Options for VM.
2026-02-12 04:00:50 (27191): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-12 04:00:50 (27191): Enabling VM Network Access.
2026-02-12 04:00:50 (27191): Disabling USB Support for VM.
2026-02-12 04:00:50 (27191): Disabling COM Port Support for VM.
2026-02-12 04:00:50 (27191): Disabling LPT Port Support for VM.
2026-02-12 04:00:50 (27191): Disabling Audio Support for VM.
2026-02-12 04:00:50 (27191): Disabling Clipboard Support for VM.
2026-02-12 04:00:50 (27191): Disabling Drag and Drop Support for VM.
2026-02-12 04:00:50 (27191): Adding storage controller(s) to VM.
2026-02-12 04:00:50 (27191): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-12 04:00:51 (27191): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-12 04:00:51 (27191): forwarding host port 36559 to guest port 80
2026-02-12 04:00:51 (27191): Enabling remote desktop for VM.
2026-02-12 04:00:51 (27191): Enabling shared directory for VM.
2026-02-12 04:00:51 (27191): Starting VM using VBoxManage interface. (boinc_bc78624a7d56547b, slot#0)
2026-02-12 04:00:52 (27191): Successfully started VM. (PID = '27684')
2026-02-12 04:00:52 (27191): Reporting VM Process ID to BOINC.
2026-02-12 04:00:52 (27191): Guest Log: BIOS: VirtualBox 7.0.16
2026-02-12 04:00:52 (27191): Guest Log: CPUID EDX: 0x178bfbff
2026-02-12 04:00:52 (27191): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-12 04:00:52 (27191): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-12 04:00:52 (27191): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-12 04:00:52 (27191): Detected: Web Application Enabled (http://localhost:36559)
2026-02-12 04:00:52 (27191): Detected: Remote Desktop Enabled (localhost:46217)
2026-02-12 04:00:52 (27191): Preference change detected
2026-02-12 04:00:52 (27191): Setting CPU throttle for VM. (100%)
2026-02-12 04:00:52 (27191): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-12 04:00:54 (27191): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-12 04:00:54 (27191): Guest Log: BIOS: Booting from Hard Disk...
2026-02-12 04:00:57 (27191): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-12 04:00:57 (27191): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-12 04:00:57 (27191): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-12 04:01:02 (27191): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-12 04:01:02 (27191): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-12 04:01:09 (27191): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-12 04:01:09 (27191): Guest Log: 00:00:00.000150 main     Log opened 2026-02-12T04:01:06.575251000Z
2026-02-12 04:01:09 (27191): Guest Log: 00:00:00.000239 main     OS Product: Linux
2026-02-12 04:01:09 (27191): Guest Log: 00:00:00.000268 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-12 04:01:09 (27191): Guest Log: 00:00:00.000286 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-12 04:01:09 (27191): Guest Log: 00:00:00.000304 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-12 04:01:09 (27191): Guest Log: 00:00:00.000304 main     Process ID: 1296
2026-02-12 04:01:09 (27191): Guest Log: 00:00:00.000305 main     Package type: LINUX_64BITS_GENERIC
2026-02-12 04:01:09 (27191): Guest Log: 00:00:00.001209 main     5.2.32 r132073 started. Verbose level = 0
2026-02-12 04:01:09 (27191): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-12 04:01:09 (27191): Guest Log: [INFO] Mounting shared directory
2026-02-12 04:01:09 (27191): Guest Log: [INFO] Checking for init_data.xml
2026-02-12 04:01:12 (27191): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-12 04:01:12 (27191): Guest Log: [INFO] Detected branch: prod
2026-02-12 04:01:12 (27191): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-12 04:01:12 (27191): Guest Log: Copying input files
2026-02-12 04:01:15 (27191): Guest Log: Copied input files into RunAtlas.
2026-02-12 04:01:15 (27191): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-12 04:01:15 (27191): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-12 04:01:15 (27191): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-12 04:01:15 (27191): Guest Log: Further information can be found at the LHC@home message board.
2026-02-12 04:01:26 (27191): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-12 04:01:27 (27191): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-12 04:01:27 (27191): Guest Log: 2.6.3.0 1572 0 32160 156138 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-02-12 04:01:28 (27191): Guest Log: copied the webapp to /var/www
2026-02-12 04:01:28 (27191): Guest Log: ATHENA_PROC_NUMBER=4
2026-02-12 04:01:28 (27191): Guest Log: ATHENA_CORE_NUMBER=4
2026-02-12 04:01:28 (27191): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-12 04:01:28 (27191): Guest Log:  *** Starting ATLAS job. (PandaID=7011765394 taskID=48431096) ***
2026-02-12 05:01:45 (27191): VM state change detected. (old = 'running', new = 'paused')
2026-02-12 20:18:12 (27191): Preference change detected
2026-02-12 20:18:12 (27191): Setting CPU throttle for VM. (100%)
2026-02-12 20:18:13 (27191): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-12 20:18:13 (27191): VM state change detected. (old = 'paused', new = 'running')
2026-02-12 20:18:16 (27191): Guest Log: 01:00:41.853399 timesync vgsvcTimeSyncWorker: Radical host time change: 54 997 863 000 000ns (HostNow=1 770 927 496 414 000 000 ns HostLast=1 770 872 498 551 000 000 ns)
2026-02-12 20:18:26 (27191): Guest Log: 01:00:51.854655 timesync vgsvcTimeSyncWorker: Radical guest time change: 54 998 008 151 000ns (GuestNow=1 770 927 506 425 946 000 ns GuestLast=1 770 872 508 417 795 000 ns fSetTimeLastLoop=true )
2026-02-12 20:56:21 (27191): Status Report: Elapsed Time: '6000.000000'
2026-02-12 20:56:21 (27191): Status Report: CPU Time: '22138.540000'
2026-02-12 21:18:23 (27191): VM state change detected. (old = 'running', new = 'paused')
2026-02-12 22:44:38 (27191): Preference change detected
2026-02-12 22:44:38 (27191): Setting CPU throttle for VM. (100%)
2026-02-12 22:44:38 (27191): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-12 22:44:39 (27191): VM state change detected. (old = 'paused', new = 'running')
2026-02-12 22:44:44 (27191): Guest Log: 02:00:53.561963 timesync vgsvcTimeSyncWorker: Radical host time change: 5 185 999 000 000ns (HostNow=1 770 936 284 104 000 000 ns HostLast=1 770 931 098 105 000 000 ns)
2026-02-12 22:44:54 (27191): Guest Log: 02:01:03.562654 timesync vgsvcTimeSyncWorker: Radical guest time change: 5 185 971 811 000ns (GuestNow=1 770 936 294 104 741 000 ns GuestLast=1 770 931 108 132 930 000 ns fSetTimeLastLoop=true )
2026-02-12 23:34:32 (27191): Guest Log:  *** Job finished ***
2026-02-12 23:34:32 (27191): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-12 23:34:32 (27191): Guest Log: 2026-02-12 23:34:19,501 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-12 23:34:32 (27191): Guest Log: 2026-02-12 23:34:19,501 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-12 23:34:32 (27191): Guest Log: 2026-02-12 23:34:24,693 | INFO     | [monitor] cgroup control has ended
2026-02-12 23:34:32 (27191): Guest Log: 2026-02-12 23:34:26,435 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140692334430016)>', '<ExcThread(monitor, started 140691879470848)>']
2026-02-12 23:34:32 (27191): Guest Log: 2026-02-12 23:34:26,532 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-12 23:34:32 (27191): Guest Log: 2026-02-12 23:34:26,532 | INFO     | [monitor] control thread has ended
2026-02-12 23:34:32 (27191): Guest Log: 2026-02-12 23:34:31,453 | INFO     | all workflow threads have been joined
2026-02-12 23:34:32 (27191): Guest Log: 2026-02-12 23:34:31,454 | INFO     | end of generic workflow (traces error code: 0)
2026-02-12 23:34:32 (27191): Guest Log: 2026-02-12 23:34:31,454 | INFO     | traces error code: 0
2026-02-12 23:34:32 (27191): Guest Log: 2026-02-12 23:34:31,455 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-12 23:34:32 (27191): Guest Log: 2026-02-12 23:34:31,617 [wrapper] ==== pilot stdout END ====
2026-02-12 23:34:32 (27191): Guest Log: 2026-02-12 23:34:31,628 [wrapper] ==== wrapper stdout RESUME ====
2026-02-12 23:34:32 (27191): Guest Log: 2026-02-12 23:34:31,637 [wrapper] pilotpid: 5975
2026-02-12 23:34:32 (27191): Guest Log: 2026-02-12 23:34:31,647 [wrapper] Pilot exit status: 0
2026-02-12 23:34:32 (27191): Guest Log: 2026-02-12 23:34:31,735 [wrapper] pandaids: 7011765394
2026-02-12 23:34:32 (27191): Guest Log: 2026-02-12 23:34:31,827 [wrapper] cleanup supervisor_pilot 27106 5976
2026-02-12 23:34:32 (27191): Guest Log: 2026-02-12 23:34:31,840 [wrapper] Test setup, not cleaning
2026-02-12 23:34:32 (27191): Guest Log: 2026-02-12 23:34:31,854 [wrapper] apfmon messages muted
2026-02-12 23:34:32 (27191): Guest Log: 2026-02-12 23:34:31,866 [wrapper] ==== wrapper stdout END ====
2026-02-12 23:34:32 (27191): Guest Log: 2026-02-12 23:34:31,879 [wrapper] ==== wrapper stderr END ====
2026-02-12 23:34:32 (27191): Guest Log:  *** Error codes and diagnostics ***
2026-02-12 23:34:32 (27191): Guest Log:     "exeErrorCode": 0,
2026-02-12 23:34:32 (27191): Guest Log:     "exeErrorDiag": "",
2026-02-12 23:34:32 (27191): Guest Log:     "pilotErrorCode": 0,
2026-02-12 23:34:32 (27191): Guest Log:     "pilotErrorDiag": "",
2026-02-12 23:34:32 (27191): Guest Log:  *** Listing of results directory ***
2026-02-12 23:34:32 (27191): Guest Log: total 282788
2026-02-12 23:34:32 (27191): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb 11 07:46 pilot3.tar.gz
2026-02-12 23:34:32 (27191): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb 11 07:46 queuedata.json
2026-02-12 23:34:32 (27191): Guest Log: -rwx------. 1 atlas atlas     36322 Feb 11 07:46 runpilot2-wrapper.sh
2026-02-12 23:34:32 (27191): Guest Log: -rw-r--r--. 1 atlas atlas      5984 Feb 12 04:01 init_data.xml
2026-02-12 23:34:32 (27191): Guest Log: -rw-r--r--. 1 atlas atlas    597951 Feb 12 04:01 input.tar.gz
2026-02-12 23:34:32 (27191): Guest Log: -rw-r--r--. 1 atlas atlas     15845 Feb 12 04:01 start_atlas.sh
2026-02-12 23:34:32 (27191): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 12 04:01 EVNT.48431094._000682.pool.root.1 -> /data/./ATLAS.root_0
2026-02-12 23:34:32 (27191): Guest Log: -rw-r--r--. 1 atlas atlas      2556 Feb 12 04:01 pandaJob.out
2026-02-12 23:34:32 (27191): Guest Log: -rw-------. 1 atlas atlas   1005065 Feb 12 04:02 agis_schedconf.cvmfs.json
2026-02-12 23:34:32 (27191): Guest Log: -rw-------. 1 atlas atlas       425 Feb 12 04:02 workernode_map.json
2026-02-12 23:34:32 (27191): Guest Log: drwx------. 5 atlas atlas      4096 Feb 12 04:02 pilot3
2026-02-12 23:34:32 (27191): Guest Log: -rw-------. 1 atlas atlas 282201361 Feb 12 23:33 HITS.48431096._029867.pool.root.1
2026-02-12 23:34:32 (27191): Guest Log: -rw-------. 1 atlas atlas      1032 Feb 12 23:33 memory_monitor_summary.json
2026-02-12 23:34:32 (27191): Guest Log: -rw-------. 1 atlas atlas   1512955 Feb 12 23:33 agis_ddmendpoints.agis.ALL.json
2026-02-12 23:34:32 (27191): Guest Log: -rw-------. 1 atlas atlas    340996 Feb 12 23:33 log.48431096._029867.job.log.tgz.1
2026-02-12 23:34:32 (27191): Guest Log: -rw-------. 1 atlas atlas      6374 Feb 12 23:33 heartbeat.json
2026-02-12 23:34:32 (27191): Guest Log: -rw-------. 1 atlas atlas        98 Feb 12 23:34 pilot_heartbeat.json
2026-02-12 23:34:32 (27191): Guest Log: -rw-------. 1 atlas atlas      4801 Feb 12 23:34 pilotlog.txt
2026-02-12 23:34:32 (27191): Guest Log: -rw-------. 1 atlas atlas   1416660 Feb 12 23:34 log.48431096._029867.job.log.1
2026-02-12 23:34:32 (27191): Guest Log: -rw-------. 1 atlas atlas       357 Feb 12 23:34 output.list
2026-02-12 23:34:32 (27191): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 12 23:34 runtime_log
2026-02-12 23:34:32 (27191): Guest Log: -rw-------. 1 atlas atlas   1771520 Feb 12 23:34 result.tar.gz
2026-02-12 23:34:32 (27191): Guest Log: -rw-r--r--. 1 atlas atlas      8752 Feb 12 23:34 runtime_log.err
2026-02-12 23:34:32 (27191): Guest Log: -rw-------. 1 atlas atlas       656 Feb 12 23:34 fb9MDmg6JA9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmsqjKDmEVSnan.diag
2026-02-12 23:34:32 (27191): Guest Log: Looking for outputfile HITS.48431096._029867.pool.root.1
2026-02-12 23:34:32 (27191): Guest Log: HITS file was successfully produced
2026-02-12 23:34:32 (27191): Guest Log: -rw-------. 1 atlas atlas 282201361 Feb 12 23:33 /home/atlas/RunAtlas/HITS.48431096._029867.pool.root.1
2026-02-12 23:34:32 (27191): Guest Log: Successfully finished the ATLAS job!
2026-02-12 23:34:32 (27191): Guest Log: Copying the results back to the shared directory!
2026-02-12 23:34:32 (27191): Guest Log:  *** Contents of shared directory: ***
2026-02-12 23:34:32 (27191): Guest Log: total 662624
2026-02-12 23:34:32 (27191): Guest Log: -rw-r--r--. 1 root root 676125647 Feb 12 04:00 ATLAS.root_0
2026-02-12 23:34:32 (27191): Guest Log: -rw-r--r--. 1 root root      5984 Feb 12 04:00 init_data.xml
2026-02-12 23:34:32 (27191): Guest Log: -rw-r--r--. 1 root root    597951 Feb 12 04:00 input.tar.gz
2026-02-12 23:34:32 (27191): Guest Log: -rw-r--r--. 1 root root   1771520 Feb 12 23:34 result.tar.gz
2026-02-12 23:34:32 (27191): Guest Log: -rw-r--r--. 1 root root     15845 Feb 12 04:00 start_atlas.sh
2026-02-12 23:34:32 (27191): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-12 23:34:32 (27191): VM Completion File Detected.
2026-02-12 23:34:32 (27191): Powering off VM.
2026-02-12 23:34:33 (27191): Successfully stopped VM.
2026-02-12 23:34:33 (27191): Deregistering VM. (boinc_bc78624a7d56547b, slot#0)
2026-02-12 23:34:33 (27191): Removing network bandwidth throttle group from VM.
2026-02-12 23:34:33 (27191): Removing VM from VirtualBox.
2026-02-12 23:34:38 (27191): called boinc_finish(0)

</stderr_txt>
]]>

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