Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
19:53:28 (9281): wrapper (7.7.26015): starting
19:53:28 (9281): wrapper: running run_atlas (--nthreads 8)
[2026-02-11 19:53:28] Arguments: --nthreads 8
[2026-02-11 19:53:28] Threads: 8
[2026-02-11 19:53:28] Checking for CVMFS
[2026-02-11 19:53:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 19:53:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 19:53:28] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 19:53:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 19:53:28] 2.11.0.0 4268 176760 95116 156125 0 188 3652254 4096000 2742 130560 2 23980845 99.660 13708942 532 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-02-11 19:53:28] CVMFS is ok
[2026-02-11 19:53:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-11 19:53:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-11 19:53:28] Further information can be found at the LHC@home message board.
[2026-02-11 19:53:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 19:53:28] Checking for apptainer binary...
[2026-02-11 19:53:28] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-02-11 19:53:28] apptainer is not installed, using version from CVMFS
[2026-02-11 19:53:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 19:53:29] WARNING: Environment variable TMPDIR already has value [/tmp/job_11088588/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node267
[2026-02-11 19:53:29] apptainer works
[2026-02-11 19:53:29] Set ATHENA_PROC_NUMBER=8
[2026-02-11 19:53:29] Set ATHENA_CORE_NUMBER=8
[2026-02-11 19:53:29] Starting ATLAS job with PandaID=7011743306
[2026-02-11 19:53:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11088588/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-11 21:03:48]  *** The last 200 lines of the pilot log: ***
[2026-02-11 21:03:48]  is_altstaged=None
[2026-02-11 21:03:48]  is_tar=False
[2026-02-11 21:03:48]  lfn=log.48431096._029337.job.log.tgz.1
[2026-02-11 21:03:48]  mtime=0
[2026-02-11 21:03:48]  protocol_id=None
[2026-02-11 21:03:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-11 21:03:48]  replicas=None
[2026-02-11 21:03:48]  scope=mc23_13p6TeV
[2026-02-11 21:03:48]  status=None
[2026-02-11 21:03:48]  status_code=0
[2026-02-11 21:03:48]  storage_token=
[2026-02-11 21:03:48]  surl=/tmp/job_11088588/atlas/pilot/slots/0/PanDA_Pilot-7011743306/log.48431096._029337.job.log.tgz.1
[2026-02-11 21:03:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fa/59/log.48431096._029337.job.log.tgz.1
[2026-02-11 21:03:48]  workdir=None
[2026-02-11 21:03:48] ]
[2026-02-11 21:03:48] 2026-02-11 20:02:50,078 | INFO     | transferring file log.48431096._029337.job.log.tgz.1 from /tmp/job_11088588/atlas/pilot/slots/0/PanDA_Pilot-7011743306/log.48431096._029337.job.log.tgz.1 to /tmp/j
[2026-02-11 21:03:48] 2026-02-11 20:02:50,078 | INFO     | executing command: /usr/bin/env mv /tmp/job_11088588/atlas/pilot/slots/0/PanDA_Pilot-7011743306/log.48431096._029337.job.log.tgz.1 /tmp/job_11088588/atlas/pilot/sl
[2026-02-11 21:03:48] 2026-02-11 20:02:50,086 | INFO     | adding to output.list: log.48431096._029337.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fa/59/log.48431096._029337.job.log.tg
[2026-02-11 21:03:48] 2026-02-11 20:02:50,086 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-11 21:03:48] 2026-02-11 20:02:50,086 | INFO     | summary of transferred files:
[2026-02-11 21:03:48] 2026-02-11 20:02:50,086 | INFO     |  -- lfn=log.48431096._029337.job.log.tgz.1, status_code=0, status=transferred
[2026-02-11 21:03:48] 2026-02-11 20:02:50,087 | INFO     | stage-out finished correctly
[2026-02-11 21:03:48] 2026-02-11 20:02:50,373 | WARNING  | process 17647 can no longer be monitored (due to stat problems) - aborting
[2026-02-11 21:03:48] 2026-02-11 20:02:50,373 | INFO     | using path: /tmp/job_11088588/atlas/pilot/slots/0/PanDA_Pilot-7011743306/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 21:03:48] 2026-02-11 20:02:50,463 | INFO     | number of running child processes to parent process 17647: 1
[2026-02-11 21:03:48] 2026-02-11 20:02:50,463 | INFO     | maximum number of monitored processes: 6
[2026-02-11 21:03:48] 2026-02-11 20:02:51,504 | INFO     | time since job start (4157s) is within the limit (349056.0s)
[2026-02-11 21:03:48] 2026-02-11 20:02:52,744 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-11 21:03:48] 2026-02-11 20:02:52,966 | INFO     | monitor loop #314: job 0:7011743306 is in state 'finished'
[2026-02-11 21:03:48] 2026-02-11 20:02:52,966 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-11 21:03:48] 2026-02-11 20:02:53,509 | INFO     | time since job start (4159s) is within the limit (349056.0s)
[2026-02-11 21:03:48] 2026-02-11 20:02:54,727 | INFO     | job 7011743306 has state=finished
[2026-02-11 21:03:48] 2026-02-11 20:02:54,728 | INFO     | preparing for final server update for job 7011743306 in state='finished'
[2026-02-11 21:03:48] 2026-02-11 20:02:54,728 | INFO     | reading metadata from: /tmp/job_11088588/atlas/pilot/slots/0/PanDA_Pilot-7011743306/jobReport.json
[2026-02-11 21:03:48] 2026-02-11 20:02:54,729 | INFO     | added worker_node to metadata from /tmp/job_11088588/atlas/pilot/slots/0/workernode_map.json
[2026-02-11 21:03:48] 2026-02-11 20:02:54,729 | INFO     | this job has now completed (state=finished)
[2026-02-11 21:03:48] 2026-02-11 20:02:54,729 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-11 21:03:48] 2026-02-11 20:02:54,729 | INFO     | log transfer has been attempted: DONE
[2026-02-11 21:03:48] 2026-02-11 20:02:54,729 | INFO     | job 7011743306 has finished - writing final server update
[2026-02-11 21:03:48] 2026-02-11 20:02:54,730 | INFO     | total number of processed events: 400 (read)
[2026-02-11 21:03:48] 2026-02-11 20:02:54,748 | INFO     | using path: /tmp/job_11088588/atlas/pilot/slots/0/PanDA_Pilot-7011743306/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 21:03:48] 2026-02-11 20:02:54,748 | INFO     | extracted standard info from prmon json
[2026-02-11 21:03:48] 2026-02-11 20:02:54,748 | INFO     | extracted standard memory fields from prmon json
[2026-02-11 21:03:48] 2026-02-11 20:02:54,748 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-11 21:03:48] 2026-02-11 20:02:54,748 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-11 21:03:48] 2026-02-11 20:02:54,748 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-11 21:03:48] 2026-02-11 20:02:54,749 | INFO     | fitting pss+swap vs Time
[2026-02-11 21:03:48] 2026-02-11 20:02:54,749 | INFO     | sum of square deviations: 70364110.0
[2026-02-11 21:03:48] 2026-02-11 20:02:54,749 | INFO     | sum of deviations: -1960170278.9999995
[2026-02-11 21:03:48] 2026-02-11 20:02:54,749 | INFO     | mean x: 1770838165.0
[2026-02-11 21:03:48] 2026-02-11 20:02:54,749 | INFO     | mean y: 2633824.5573770492
[2026-02-11 21:03:48] 2026-02-11 20:02:54,749 | INFO     | intersect: 49333810470.60459
[2026-02-11 21:03:48] 2026-02-11 20:02:54,750 | INFO     | chi2: 0.025000909463948985
[2026-02-11 21:03:48] 2026-02-11 20:02:54,750 | INFO     | current memory leak: -27.86 B/s (using 61 data points, chi2=0.03)
[2026-02-11 21:03:48] 2026-02-11 20:02:54,750 | INFO     | could have reported an average CPU frequency of 2687 MHz (6 samples)
[2026-02-11 21:03:48] 2026-02-11 20:02:54,750 | INFO     | ..............................
[2026-02-11 21:03:48] 2026-02-11 20:02:54,750 | INFO     | . Timing measurements:
[2026-02-11 21:03:48] 2026-02-11 20:02:54,750 | INFO     | . get job = 0 s
[2026-02-11 21:03:48] 2026-02-11 20:02:54,750 | INFO     | . initial setup = 2 s
[2026-02-11 21:03:48] 2026-02-11 20:02:54,750 | INFO     | . payload setup = 2 s
[2026-02-11 21:03:48] 2026-02-11 20:02:54,750 | INFO     | . stage-in = 0 s
[2026-02-11 21:03:48] 2026-02-11 20:02:54,750 | INFO     | . payload execution = 4137 s
[2026-02-11 21:03:48] 2026-02-11 20:02:54,750 | INFO     | . stage-out = 0 s
[2026-02-11 21:03:48] 2026-02-11 20:02:54,750 | INFO     | . log creation = 0 s
[2026-02-11 21:03:48] 2026-02-11 20:02:54,750 | INFO     | ..............................
[2026-02-11 21:03:48] 2026-02-11 20:02:54,797 | INFO     | 
[2026-02-11 21:03:48] 2026-02-11 20:02:54,797 | INFO     | job summary report
[2026-02-11 21:03:48] 2026-02-11 20:02:54,797 | INFO     | --------------------------------------------------
[2026-02-11 21:03:48] 2026-02-11 20:02:54,798 | INFO     | PanDA job id: 7011743306
[2026-02-11 21:03:48] 2026-02-11 20:02:54,798 | INFO     | task id: 48431096
[2026-02-11 21:03:48] 2026-02-11 20:02:54,798 | INFO     | errors: (none)
[2026-02-11 21:03:48] 2026-02-11 20:02:54,798 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-11 21:03:48] 2026-02-11 20:02:54,798 | INFO     | pilot state: finished 
[2026-02-11 21:03:48] 2026-02-11 20:02:54,798 | INFO     | transexitcode: 0
[2026-02-11 21:03:48] 2026-02-11 20:02:54,798 | INFO     | exeerrorcode: 0
[2026-02-11 21:03:48] 2026-02-11 20:02:54,798 | INFO     | exeerrordiag: 
[2026-02-11 21:03:48] 2026-02-11 20:02:54,798 | INFO     | exitcode: 0
[2026-02-11 21:03:48] 2026-02-11 20:02:54,798 | INFO     | exitmsg: OK
[2026-02-11 21:03:48] 2026-02-11 20:02:54,798 | INFO     | cpuconsumptiontime: 29932 s
[2026-02-11 21:03:48] 2026-02-11 20:02:54,798 | INFO     | nevents: 400
[2026-02-11 21:03:48] 2026-02-11 20:02:54,798 | INFO     | neventsw: 0
[2026-02-11 21:03:48] 2026-02-11 20:02:54,798 | INFO     | pid: 17647
[2026-02-11 21:03:48] 2026-02-11 20:02:54,798 | INFO     | pgrp: 17647
[2026-02-11 21:03:48] 2026-02-11 20:02:54,798 | INFO     | corecount: 8
[2026-02-11 21:03:48] 2026-02-11 20:02:54,798 | INFO     | event service: False
[2026-02-11 21:03:48] 2026-02-11 20:02:54,798 | INFO     | sizes: {0: 2281799, 1: 2282371, 11: 2282371, 4143: 2308446, 4145: 2317474, 4147: 2317530, 4149: 2317852}
[2026-02-11 21:03:48] 2026-02-11 20:02:54,798 | INFO     | --------------------------------------------------
[2026-02-11 21:03:48] 2026-02-11 20:02:54,798 | INFO     | 
[2026-02-11 21:03:48] 2026-02-11 20:02:54,798 | INFO     | executing command: ls -lF /tmp/job_11088588/atlas/pilot/slots/0
[2026-02-11 21:03:48] 2026-02-11 20:02:54,806 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-11 21:03:48] 2026-02-11 20:02:54,807 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-11 21:03:48] 2026-02-11 20:02:54,807 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-11 21:03:48] 2026-02-11 20:02:54,807 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-11 21:03:48] 2026-02-11 20:02:54,807 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-11 21:03:48] 2026-02-11 20:02:54,807 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-11 21:03:48] 2026-02-11 20:02:54,807 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-11 21:03:48] 2026-02-11 20:02:54,807 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-11 21:03:48] 2026-02-11 20:02:54,807 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-11 21:03:48] 2026-02-11 20:02:54,807 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-11 21:03:48] 2026-02-11 20:02:54,807 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-11 21:03:48] 2026-02-11 20:02:54,807 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-11 21:03:48] 2026-02-11 20:02:54,807 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-11 21:03:48] 2026-02-11 20:02:54,807 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-11 21:03:48] 2026-02-11 20:02:54,807 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-11 21:03:48] 2026-02-11 20:02:54,807 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-11 21:03:48] 2026-02-11 20:02:54,807 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-11 21:03:48] 2026-02-11 20:02:54,807 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-11 21:03:48] 2026-02-11 20:02:54,807 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-11 21:03:48] 2026-02-11 20:02:54,807 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-11 21:03:48] 2026-02-11 20:02:54,807 | INFO     | job 7011743306 has completed (purged errors)
[2026-02-11 21:03:48] 2026-02-11 20:02:54,807 | INFO     | overall cleanup function is called
[2026-02-11 21:03:48] 2026-02-11 20:02:55,813 | INFO     | --- collectZombieJob: --- 10, [17647]
[2026-02-11 21:03:48] 2026-02-11 20:02:55,813 | INFO     | zombie collector waiting for pid 17647
[2026-02-11 21:03:48] 2026-02-11 20:02:55,814 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-11 21:03:48] 2026-02-11 20:02:55,814 | INFO     | collected zombie processes
[2026-02-11 21:03:48] 2026-02-11 20:02:55,814 | INFO     | will attempt to kill all subprocesses of pid=17647
[2026-02-11 21:03:48] 2026-02-11 20:02:55,909 | INFO     | process IDs to be killed: [17647] (in reverse order)
[2026-02-11 21:03:48] 2026-02-11 20:02:55,942 | WARNING  | found no corresponding commands to process id(s)
[2026-02-11 21:03:48] 2026-02-11 20:02:55,942 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-11 21:03:48] 2026-02-11 20:02:55,946 | INFO     | did not find any defunct processes belonging to 17647
[2026-02-11 21:03:48] 2026-02-11 20:02:55,949 | INFO     | did not find any defunct processes belonging to 17647
[2026-02-11 21:03:48] 2026-02-11 20:02:55,949 | INFO     | ready for new job
[2026-02-11 21:03:48] 2026-02-11 20:02:55,949 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-11 21:03:48] 2026-02-11 20:02:55,950 | INFO     | **************************************
[2026-02-11 21:03:48] 2026-02-11 20:02:55,950 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-11 21:03:48] 2026-02-11 20:02:55,950 | INFO     | **************************************
[2026-02-11 21:03:48] 2026-02-11 20:02:55,950 | INFO     | 
[2026-02-11 21:03:48] 2026-02-11 20:02:55,964 | INFO     | architecture information:
[2026-02-11 21:03:48] 2026-02-11 20:02:55,964 | INFO     | executing command: cat /etc/os-release
[2026-02-11 21:03:48] 2026-02-11 20:02:55,971 | INFO     | cat /etc/os-release:
[2026-02-11 21:03:48] NAME="CentOS Linux"
[2026-02-11 21:03:48] VERSION="7 (Core)"
[2026-02-11 21:03:48] ID="centos"
[2026-02-11 21:03:48] ID_LIKE="rhel fedora"
[2026-02-11 21:03:48] VERSION_ID="7"
[2026-02-11 21:03:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-11 21:03:48] ANSI_COLOR="0;31"
[2026-02-11 21:03:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-11 21:03:48] HOME_URL="https://www.centos.org/"
[2026-02-11 21:03:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-11 21:03:48] 
[2026-02-11 21:03:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-11 21:03:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-11 21:03:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-11 21:03:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-11 21:03:48] 
[2026-02-11 21:03:48] 2026-02-11 20:02:55,971 | INFO     | **************************************
[2026-02-11 21:03:48] 2026-02-11 20:02:56,474 | INFO     | executing command: df -mP /tmp/job_11088588/atlas/pilot/slots/0
[2026-02-11 21:03:48] 2026-02-11 20:02:56,479 | INFO     | sufficient remaining disk space (222626316288 B)
[2026-02-11 21:03:48] 2026-02-11 20:02:56,480 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-11 21:03:48] 2026-02-11 20:02:56,480 | INFO     | current server update state: UPDATING_FINAL
[2026-02-11 21:03:48] 2026-02-11 20:02:56,480 | INFO     | update_server=False
[2026-02-11 21:03:48] 2026-02-11 20:02:56,480 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-11 21:03:48] 2026-02-11 20:02:56,480 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-11 21:03:48] 2026-02-11 20:02:56,480 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-11 21:03:48] 2026-02-11 20:02:56,480 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-11 21:03:48] 2026-02-11 20:02:56,480 | INFO     | aborting loop
[2026-02-11 21:03:48] 2026-02-11 20:02:56,857 | INFO     | all data control threads have been joined
[2026-02-11 21:03:48] 2026-02-11 20:02:56,950 | INFO     | all payload control threads have been joined
[2026-02-11 21:03:48] 2026-02-11 20:02:57,485 | INFO     | [job] retrieve thread has finished
[2026-02-11 21:03:48] 2026-02-11 20:02:57,485 | INFO     | [job] queue monitor thread has finished
[2026-02-11 21:03:48] 2026-02-11 20:02:57,486 | INFO     | [job] job monitor thread has finished
[2026-02-11 21:03:48] 2026-02-11 20:02:57,511 | INFO     | all job control threads have been joined
[2026-02-11 21:03:48] 2026-02-11 20:02:57,620 | INFO     | [payload] validate_post thread has finished
[2026-02-11 21:03:48] 2026-02-11 20:02:57,862 | INFO     | [data] control thread has finished
[2026-02-11 21:03:48] 2026-02-11 20:02:57,955 | INFO     | [payload] control thread has finished
[2026-02-11 21:03:48] 2026-02-11 20:02:57,973 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-11 21:03:48] 2026-02-11 20:02:58,035 | INFO     | [job] validate thread has finished
[2026-02-11 21:03:48] 2026-02-11 20:02:58,257 | INFO     | [job] create_data_payload thread has finished
[2026-02-11 21:03:48] 2026-02-11 20:02:58,485 | INFO     | [data] copytool_out thread has finished
[2026-02-11 21:03:48] 2026-02-11 20:02:58,516 | INFO     | [job] control thread has finished
[2026-02-11 21:03:48] 2026-02-11 20:02:58,538 | INFO     | [data] copytool_in thread has finished
[2026-02-11 21:03:48] 2026-02-11 20:02:58,538 | INFO     | [payload] failed_post thread has finished
[2026-02-11 21:03:48] 2026-02-11 20:02:58,549 | INFO     | [payload] validate_pre thread has finished
[2026-02-11 21:03:48] 2026-02-11 20:02:58,573 | INFO     | [payload] execute_payloads thread has finished
[2026-02-11 21:03:48] 2026-02-11 20:02:58,797 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-11 21:03:48] 2026-02-11 20:03:02,802 | INFO     | [data] queue_monitor thread has finished
[2026-02-11 21:03:48] 2026-02-11 20:03:26,696 | INFO     | PID=13139 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-11 21:03:48] 2026-02-11 20:03:26,696 | INFO     | .. there are 2 such processes running
[2026-02-11 21:03:48] 2026-02-11 20:03:26,696 | INFO     | found 0 job(s) in 20 queues
[2026-02-11 21:03:48] 2026-02-11 20:03:26,696 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-11 21:03:48] 2026-02-11 20:03:26,696 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-11 21:03:48] 2026-02-11 20:03:41,274 | INFO     | [monitor] cgroup control has ended
[2026-02-11 21:03:48] 2026-02-11 20:03:43,260 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061089536)>']
[2026-02-11 21:03:48] 2026-02-11 20:03:43,780 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-11 21:03:48] 2026-02-11 20:03:43,780 | INFO     | [monitor] control thread has ended
[2026-02-11 21:03:48] 2026-02-11 20:03:48,285 | INFO     | all workflow threads have been joined
[2026-02-11 21:03:48] 2026-02-11 20:03:48,285 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-11 21:03:48] 2026-02-11 20:03:48,285 | INFO     | traces error code: 0
[2026-02-11 21:03:48] 2026-02-11 20:03:48,285 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-11 21:03:48] 2026-02-11 20:03:48,341 [wrapper] ==== pilot stdout END ====
[2026-02-11 21:03:48] 2026-02-11 20:03:48,343 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-11 21:03:48] 2026-02-11 20:03:48,344 [wrapper] pilotpid: 13139
[2026-02-11 21:03:48] 2026-02-11 20:03:48,345 [wrapper] Pilot exit status: 0
[2026-02-11 21:03:48] 2026-02-11 20:03:48,349 [wrapper] pandaids: 7011743306
[2026-02-11 21:03:48] 2026-02-11 20:03:48,370 [wrapper] cleanup supervisor_pilot  2056 13140
[2026-02-11 21:03:48] 2026-02-11 20:03:48,371 [wrapper] Test setup, not cleaning
[2026-02-11 21:03:48] 2026-02-11 20:03:48,372 [wrapper] apfmon messages muted
[2026-02-11 21:03:48] 2026-02-11 20:03:48,373 [wrapper] ==== wrapper stdout END ====
[2026-02-11 21:03:48] 2026-02-11 20:03:48,375 [wrapper] ==== wrapper stderr END ====
[2026-02-11 21:03:48]  *** Error codes and diagnostics ***
[2026-02-11 21:03:48]     "exeErrorCode": 0,
[2026-02-11 21:03:48]     "exeErrorDiag": "",
[2026-02-11 21:03:48]     "pilotErrorCode": 0,
[2026-02-11 21:03:48]     "pilotErrorDiag": "",
[2026-02-11 21:03:48]  *** Listing of results directory ***
[2026-02-11 21:03:48] total 948512
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user    584627 Feb 11 06:32 pilot3.tar.gz
[2026-02-11 21:03:48] -rwx------ 1 mf493845 unix-user     36322 Feb 11 06:36 runpilot2-wrapper.sh
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user      5111 Feb 11 06:39 queuedata.json
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user       100 Feb 11 17:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-11 21:03:48] -rwxr-xr-x 1 mf493845 unix-user      7986 Feb 11 17:46 run_atlas
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user       105 Feb 11 17:46 job.xml
[2026-02-11 21:03:48] -rw-r--r-- 2 mf493845 unix-user     15845 Feb 11 19:53 start_atlas.sh
[2026-02-11 21:03:48] drwxrwx--x 2 mf493845 unix-user       100 Feb 11 19:53 shared
[2026-02-11 21:03:48] -rw-r--r-- 2 mf493845 unix-user    597964 Feb 11 19:53 input.tar.gz
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user      6389 Feb 11 19:53 init_data.xml
[2026-02-11 21:03:48] -rw-r--r-- 2 mf493845 unix-user 677269814 Feb 11 19:53 EVNT.48431094._000671.pool.root.1
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user         0 Feb 11 19:53 boinc_setup_complete
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user      8192 Feb 11 19:53 boinc_mmap_file
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user         0 Feb 11 19:53 boinc_lockfile
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user      2557 Feb 11 19:53 pandaJob.out
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user   1008152 Feb 11 19:53 agis_schedconf.cvmfs.json
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user   1512955 Feb 11 19:53 agis_ddmendpoints.agis.ALL.json
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user       420 Feb 11 19:53 workernode_map.json
[2026-02-11 21:03:48] drwx------ 5 mf493845 unix-user       440 Feb 11 19:53 pilot3
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user 288134682 Feb 11 21:02 HITS.48431096._029337.pool.root.1
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user      1030 Feb 11 21:02 memory_monitor_summary.json
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user    342962 Feb 11 21:02 log.48431096._029337.job.log.tgz.1
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user      6327 Feb 11 21:02 heartbeat.json
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user        95 Feb 11 21:03 pilot_heartbeat.json
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user      4831 Feb 11 21:03 pilotlog.txt
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user    636071 Feb 11 21:03 log.48431096._029337.job.log.1
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user       357 Feb 11 21:03 output.list
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user       620 Feb 11 21:03 runtime_log
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user    993280 Feb 11 21:03 result.tar.gz
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user      9219 Feb 11 21:03 runtime_log.err
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user       642 Feb 11 21:03 JAtNDmq4HA9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmtnjKDmDH67Im.diag
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user     22049 Feb 11 21:03 stderr.txt
[2026-02-11 21:03:48] HITS file was successfully produced:
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user 288134682 Feb 11 21:02 shared/HITS.pool.root.1
[2026-02-11 21:03:48]  *** Contents of shared directory: ***
[2026-02-11 21:03:48] total 944356
[2026-02-11 21:03:48] -rw-r--r-- 2 mf493845 unix-user     15845 Feb 11 19:53 start_atlas.sh
[2026-02-11 21:03:48] -rw-r--r-- 2 mf493845 unix-user    597964 Feb 11 19:53 input.tar.gz
[2026-02-11 21:03:48] -rw-r--r-- 2 mf493845 unix-user 677269814 Feb 11 19:53 ATLAS.root_0
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user 288134682 Feb 11 21:02 HITS.pool.root.1
[2026-02-11 21:03:48] -rw------- 1 mf493845 unix-user    993280 Feb 11 21:03 result.tar.gz
21:03:50 (9281): run_atlas exited; CPU time 29985.180179
21:03:50 (9281): called boinc_finish(0)

</stderr_txt>
]]>

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