Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:16:19 (2669310): wrapper (7.7.26015): starting
10:16:19 (2669310): wrapper: running run_atlas (--nthreads 4)
[2026-02-12 10:16:19] Arguments: --nthreads 4
[2026-02-12 10:16:19] Threads: 4
[2026-02-12 10:16:19] Checking for CVMFS
[2026-02-12 10:16:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 10:16:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 10:16:19] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 10:16:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 10:16:19] 2.9.2.0 1089749 8879 100108 156150 2 49 24900306 36864000 0 130560 0 4208116 99.985 303640 3982 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-12 10:16:19] CVMFS is ok
[2026-02-12 10:16:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-12 10:16:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-12 10:16:19] Further information can be found at the LHC@home message board.
[2026-02-12 10:16:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 10:16:19] Checking for apptainer binary...
[2026-02-12 10:16:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 10:16:19] Running /usr/bin/apptainer --version
[2026-02-12 10:16:19] apptainer version 1.4.1-1.1
[2026-02-12 10:16:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 10:16:20] thA314
[2026-02-12 10:16:20] apptainer works
[2026-02-12 10:16:20] Set ATHENA_PROC_NUMBER=4
[2026-02-12 10:16:20] Set ATHENA_CORE_NUMBER=4
[2026-02-12 10:16:20] Starting ATLAS job with PandaID=7008682409
[2026-02-12 10:16:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 10:23:39]  *** The last 200 lines of the pilot log: ***
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | WARNING  | wrong length of table data, x=[1770887814.0, 1770887875.0, 1770887936.0, 1770887997.0], y=[2500.0, 1303432.0, 1452400.0, 2325632.0] (must be same and length>=4)
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | could have reported an average CPU frequency of 3483 MHz (4 samples)
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | ..............................
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | . Timing measurements:
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | . get job = 0 s
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | . initial setup = 4 s
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | . payload setup = 4 s
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | . stage-in = 0 s
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | . payload execution = 238 s
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | . stage-out = 0 s
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | . log creation = 0 s
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | ..............................
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-7008682409/pilotlog.txt
[2026-02-12 10:23:39] 2026-02-12 09:22:49,706 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-12 10:23:39] - Log from pilotlog.txt -
[2026-02-12 10:23:39] 2026-02-12 09:22:49,687 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7008682409/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 10:23:39] 2026-02-12 09:22:49,687 | INFO     | extracted standard info from prmon json
[2026-02-12 10:23:39] 2026-02-12 09:22:49,687 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 10:23:39] 2026-02-12 09:22:49,687 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 10:23:39] 2026-02-12 09:22:49,687 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 10:23:39] 2026-02-12 09:22:49,687 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | WARNING  | wrong length of table data, x=[1770887814.0, 1770887875.0, 1770887936.0, 1770887997.0], y=[2500.0, 1303432.0, 1452400.0, 2325632.0] (must be same and length>=4)
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | could have reported an average CPU frequency of 3483 MHz (4 samples)
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | ..............................
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | . Timing measurements:
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | . get job = 0 s
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | . initial setup = 4 s
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | . payload setup = 4 s
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | . stage-in = 0 s
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | . payload execution = 238 s
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | . stage-out = 0 s
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | . log creation = 0 s
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | ..............................
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-7008682409/pilotlog.txt
[2026-02-12 10:23:39] 2026-02-12 09:22:49,706 | WARNING  | 
[2026-02-12 10:23:39] [begin log extracts]
[2026-02-12 10:23:39] - Log from pilotlog.txt -
[2026-02-12 10:23:39] 2026-02-12 09:22:49,687 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7008682409/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 10:23:39] 2026-02-12 09:22:49,687 | INFO     | extracted standard info from prmon json
[2026-02-12 10:23:39] 2026-02-12 09:22:49,687 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 10:23:39] 2026-02-12 09:22:49,687 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 10:23:39] 2026-02-12 09:22:49,687 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 10:23:39] 2026-02-12 09:22:49,687 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | WARNING  | wrong length of table data, x=[1770887814.0, 1770887875.0, 1770887936.0, 1770887997.0], y=[2500.0, 1303432.0, 1452400.0, 2325632.0] (must be same and length>=4)
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | could have reported an average CPU frequency of 3483 MHz (4 samples)
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | ..............................
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | . Timing measurements:
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | . get job = 0 s
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | . initial setup = 4 s
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | . payload setup = 4 s
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | . stage-in = 0 s
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | . payload execution = 238 s
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | . stage-out = 0 s
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | . log creation = 0 s
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | ..............................
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-12 10:23:39] 2026-02-12 09:22:49,688 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-7008682409/pilotlog.txt
[2026-02-12 10:23:39] [end log extracts]
[2026-02-12 10:23:39] 2026-02-12 09:22:49,706 | WARNING  | pilotErrorCodes = [1305, 1328] (will report primary/first error code)
[2026-02-12 10:23:39] 2026-02-12 09:22:49,706 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a 
[2026-02-12 10:23:39] 2026-02-12 09:22:49,746 | INFO     | 
[2026-02-12 10:23:39] 2026-02-12 09:22:49,746 | INFO     | job summary report
[2026-02-12 10:23:39] 2026-02-12 09:22:49,746 | INFO     | --------------------------------------------------
[2026-02-12 10:23:39] 2026-02-12 09:22:49,746 | INFO     | PanDA job id: 7008682409
[2026-02-12 10:23:39] 2026-02-12 09:22:49,746 | INFO     | task id: 48442098
[2026-02-12 10:23:39] 2026-02-12 09:22:49,746 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-12 09:20:44,842 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-12 10:23:39] 2026-02-12 09:22:49,746 | INFO     | error 2/2: 1328: Invalid memory reference or a segmentation fault in payload: EVNTtoHITS got a SIGSEGV signal (exit code 139); Logfile error in log.EVNTtoHITS: "Co
[2026-02-12 10:23:39] 2026-02-12 09:22:49,746 | INFO     | pilot error code: 1328
[2026-02-12 10:23:39] 2026-02-12 09:22:49,746 | INFO     | pilot error diag: Invalid memory reference or a segmentation fault in payload: EVNTtoHITS got a SIGSEGV signal (exit code 139); Logfile error in log.EVNTtoHITS: "C
[2026-02-12 10:23:39] 2026-02-12 09:22:49,746 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 10:23:39] 2026-02-12 09:22:49,746 | INFO     | pilot state: failed 
[2026-02-12 10:23:39] 2026-02-12 09:22:49,746 | INFO     | transexitcode: 65
[2026-02-12 10:23:39] 2026-02-12 09:22:49,746 | INFO     | exeerrorcode: 0
[2026-02-12 10:23:39] 2026-02-12 09:22:49,747 | INFO     | exeerrordiag: 
[2026-02-12 10:23:39] 2026-02-12 09:22:49,747 | INFO     | exitcode: 65
[2026-02-12 10:23:39] 2026-02-12 09:22:49,747 | INFO     | exitmsg: EVNTtoHITS got a SIGSEGV signal (exit code 139); Logfile error in log.EVNTtoHITS: "CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout."; 
[2026-02-12 10:23:39] 2026-02-12 09:22:49,747 | INFO     | cpuconsumptiontime: 100 s
[2026-02-12 10:23:39] 2026-02-12 09:22:49,747 | INFO     | nevents: 0
[2026-02-12 10:23:39] 2026-02-12 09:22:49,747 | INFO     | neventsw: 0
[2026-02-12 10:23:39] 2026-02-12 09:22:49,747 | INFO     | pid: 2677940
[2026-02-12 10:23:39] 2026-02-12 09:22:49,747 | INFO     | pgrp: 2677940
[2026-02-12 10:23:39] 2026-02-12 09:22:49,747 | INFO     | corecount: 4
[2026-02-12 10:23:39] 2026-02-12 09:22:49,747 | INFO     | event service: False
[2026-02-12 10:23:39] 2026-02-12 09:22:49,747 | INFO     | sizes: {0: 2282227, 10: 2282227, 247: 2312065, 248: 2312065, 364: 2312231}
[2026-02-12 10:23:39] 2026-02-12 09:22:49,747 | INFO     | --------------------------------------------------
[2026-02-12 10:23:39] 2026-02-12 09:22:49,747 | INFO     | 
[2026-02-12 10:23:39] 2026-02-12 09:22:49,747 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-12 10:23:39] 2026-02-12 09:22:49,767 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 10:23:39] 2026-02-12 09:22:49,768 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 10:23:39] 2026-02-12 09:22:49,768 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 10:23:39] 2026-02-12 09:22:49,768 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 10:23:39] 2026-02-12 09:22:49,768 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 10:23:39] 2026-02-12 09:22:49,768 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 10:23:39] 2026-02-12 09:22:49,768 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 10:23:39] 2026-02-12 09:22:49,768 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 10:23:39] 2026-02-12 09:22:49,768 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 10:23:39] 2026-02-12 09:22:49,768 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 10:23:39] 2026-02-12 09:22:49,768 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 10:23:39] 2026-02-12 09:22:49,768 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 10:23:39] 2026-02-12 09:22:49,768 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 10:23:39] 2026-02-12 09:22:49,768 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 10:23:39] 2026-02-12 09:22:49,768 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 10:23:39] 2026-02-12 09:22:49,768 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 10:23:39] 2026-02-12 09:22:49,768 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 10:23:39] 2026-02-12 09:22:49,768 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 10:23:39] 2026-02-12 09:22:49,768 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 10:23:39] 2026-02-12 09:22:49,768 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 10:23:39] 2026-02-12 09:22:49,768 | INFO     | job 7008682409 has completed (purged errors)
[2026-02-12 10:23:39] 2026-02-12 09:22:49,768 | INFO     | overall cleanup function is called
[2026-02-12 10:23:39] 2026-02-12 09:22:50,454 | INFO     | PID=2673435 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-12 10:23:39] 2026-02-12 09:22:50,775 | INFO     | --- collectZombieJob: --- 10, [2677940]
[2026-02-12 10:23:39] 2026-02-12 09:22:50,775 | INFO     | zombie collector waiting for pid 2677940
[2026-02-12 10:23:39] 2026-02-12 09:22:50,775 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 10:23:39] 2026-02-12 09:22:50,775 | INFO     | collected zombie processes
[2026-02-12 10:23:39] 2026-02-12 09:22:50,775 | INFO     | will attempt to kill all subprocesses of pid=2677940
[2026-02-12 10:23:39] 2026-02-12 09:22:50,823 | INFO     | process IDs to be killed: [2677940] (in reverse order)
[2026-02-12 10:23:39] 2026-02-12 09:22:50,861 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 10:23:39] 2026-02-12 09:22:50,861 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 10:23:39] 2026-02-12 09:22:50,863 | INFO     | did not find any defunct processes belonging to 2677940
[2026-02-12 10:23:39] 2026-02-12 09:22:50,865 | INFO     | did not find any defunct processes belonging to 2677940
[2026-02-12 10:23:39] 2026-02-12 09:22:50,865 | INFO     | ready for new job
[2026-02-12 10:23:39] 2026-02-12 09:22:50,865 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 10:23:39] 2026-02-12 09:22:50,865 | INFO     | **************************************
[2026-02-12 10:23:39] 2026-02-12 09:22:50,866 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 10:23:39] 2026-02-12 09:22:50,866 | INFO     | **************************************
[2026-02-12 10:23:39] 2026-02-12 09:22:50,866 | INFO     | 
[2026-02-12 10:23:39] 2026-02-12 09:22:50,866 | INFO     | architecture information:
[2026-02-12 10:23:39] 2026-02-12 09:22:50,866 | INFO     | executing command: cat /etc/os-release
[2026-02-12 10:23:39] 2026-02-12 09:22:50,882 | INFO     | cat /etc/os-release:
[2026-02-12 10:23:39] NAME="CentOS Linux"
[2026-02-12 10:23:39] VERSION="7 (Core)"
[2026-02-12 10:23:39] ID="centos"
[2026-02-12 10:23:39] ID_LIKE="rhel fedora"
[2026-02-12 10:23:39] VERSION_ID="7"
[2026-02-12 10:23:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 10:23:39] ANSI_COLOR="0;31"
[2026-02-12 10:23:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 10:23:39] HOME_URL="https://www.centos.org/"
[2026-02-12 10:23:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 10:23:39] 
[2026-02-12 10:23:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 10:23:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 10:23:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 10:23:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 10:23:39] 
[2026-02-12 10:23:39] 2026-02-12 09:22:50,882 | INFO     | **************************************
[2026-02-12 10:23:39] 2026-02-12 09:22:51,385 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-12 10:23:39] 2026-02-12 09:22:51,404 | INFO     | sufficient remaining disk space (230313426944 B)
[2026-02-12 10:23:39] 2026-02-12 09:22:51,404 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 10:23:39] 2026-02-12 09:22:51,404 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 10:23:39] 2026-02-12 09:22:51,405 | INFO     | update_server=False
[2026-02-12 10:23:39] 2026-02-12 09:22:51,405 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 10:23:39] 2026-02-12 09:22:51,405 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-12 10:23:39] 2026-02-12 09:22:51,405 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 10:23:39] 2026-02-12 09:22:51,405 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 10:23:39] 2026-02-12 09:22:51,405 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 10:23:39] 2026-02-12 09:22:51,405 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 10:23:39] 2026-02-12 09:22:51,438 | INFO     | all data control threads have been joined
[2026-02-12 10:23:39] 2026-02-12 09:22:52,166 | INFO     | all job control threads have been joined
[2026-02-12 10:23:39] 2026-02-12 09:22:52,203 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 10:23:39] 2026-02-12 09:22:52,287 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 10:23:39] 2026-02-12 09:22:52,287 | INFO     | aborting loop
[2026-02-12 10:23:39] 2026-02-12 09:22:52,410 | INFO     | [job] retrieve thread has finished
[2026-02-12 10:23:39] 2026-02-12 09:22:52,411 | INFO     | [job] queue monitor thread has finished
[2026-02-12 10:23:39] 2026-02-12 09:22:52,444 | INFO     | [data] control thread has finished
[2026-02-12 10:23:39] 2026-02-12 09:22:52,827 | INFO     | all payload control threads have been joined
[2026-02-12 10:23:39] 2026-02-12 09:22:52,880 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 10:23:39] 2026-02-12 09:22:53,171 | INFO     | [job] control thread has finished
[2026-02-12 10:23:39] 2026-02-12 09:22:53,237 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 10:23:39] 2026-02-12 09:22:53,250 | INFO     | [job] validate thread has finished
[2026-02-12 10:23:39] 2026-02-12 09:22:53,274 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 10:23:39] 2026-02-12 09:22:53,292 | INFO     | [job] job monitor thread has finished
[2026-02-12 10:23:39] 2026-02-12 09:22:53,309 | INFO     | [payload] failed_post thread has finished
[2026-02-12 10:23:39] 2026-02-12 09:22:53,357 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 10:23:39] 2026-02-12 09:22:53,430 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 10:23:39] 2026-02-12 09:22:53,562 | INFO     | [data] copytool_in thread has finished
[2026-02-12 10:23:39] 2026-02-12 09:22:53,809 | INFO     | [payload] validate_post thread has finished
[2026-02-12 10:23:39] 2026-02-12 09:22:53,832 | INFO     | [payload] control thread has finished
[2026-02-12 10:23:39] 2026-02-12 09:22:54,886 | INFO     | [data] copytool_out thread has finished
[2026-02-12 10:23:39] 2026-02-12 09:22:56,210 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 10:23:39] 2026-02-12 09:23:34,727 | INFO     | [monitor] cgroup control has ended
[2026-02-12 10:23:39] 2026-02-12 09:23:34,769 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140221768480576)>', '<ExcThread(monitor, started 140220540380928)>']
[2026-02-12 10:23:39] 2026-02-12 09:23:35,635 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 10:23:39] 2026-02-12 09:23:35,635 | INFO     | [monitor] control thread has ended
[2026-02-12 10:23:39] 2026-02-12 09:23:39,795 | INFO     | all workflow threads have been joined
[2026-02-12 10:23:39] 2026-02-12 09:23:39,795 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 10:23:39] 2026-02-12 09:23:39,796 | INFO     | traces error code: 0
[2026-02-12 10:23:39] 2026-02-12 09:23:39,796 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 10:23:39] 2026-02-12 09:23:39,876 [wrapper] ==== pilot stdout END ====
[2026-02-12 10:23:39] 2026-02-12 09:23:39,880 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 10:23:39] 2026-02-12 09:23:39,884 [wrapper] pilotpid: 2673435
[2026-02-12 10:23:39] 2026-02-12 09:23:39,888 [wrapper] Pilot exit status: 0
[2026-02-12 10:23:39] 2026-02-12 09:23:39,900 [wrapper] pandaids: 7008682409
[2026-02-12 10:23:39] 2026-02-12 09:23:39,924 [wrapper] cleanup supervisor_pilot 2673441 2673436
[2026-02-12 10:23:39] 2026-02-12 09:23:39,928 [wrapper] Test setup, not cleaning
[2026-02-12 10:23:39] 2026-02-12 09:23:39,932 [wrapper] apfmon messages muted
[2026-02-12 10:23:39] 2026-02-12 09:23:39,935 [wrapper] ==== wrapper stdout END ====
[2026-02-12 10:23:39] 2026-02-12 09:23:39,939 [wrapper] ==== wrapper stderr END ====
[2026-02-12 10:23:39]  *** Error codes and diagnostics ***
[2026-02-12 10:23:39]     "exeErrorCode": 0,
[2026-02-12 10:23:39]     "exeErrorDiag": "",
[2026-02-12 10:23:39]     "pilotErrorCode": 1305,
[2026-02-12 10:23:39]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGSEGV signal (exit code 139); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout.\"; Possi",
[2026-02-12 10:23:39]  *** Listing of results directory ***
[2026-02-12 10:23:40] total 485756
[2026-02-12 10:23:40] -rw-r--r-- 1 boinc boinc    584627 Feb 11 14:18 pilot3.tar.gz
[2026-02-12 10:23:40] -rwx------ 1 boinc boinc     36322 Feb 11 14:20 runpilot2-wrapper.sh
[2026-02-12 10:23:40] -rw-r--r-- 1 boinc boinc      5111 Feb 11 14:21 queuedata.json
[2026-02-12 10:23:40] -rw-r--r-- 1 boinc boinc       100 Feb 12 10:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 10:23:40] -rwxr-xr-x 1 boinc boinc      7986 Feb 12 10:16 run_atlas
[2026-02-12 10:23:40] -rw-r--r-- 1 boinc boinc       105 Feb 12 10:16 job.xml
[2026-02-12 10:23:40] -rw-r--r-- 2 boinc boinc 492987572 Feb 12 10:16 EVNT.48442096._000115.pool.root.1
[2026-02-12 10:23:40] -rw-r--r-- 2 boinc boinc    597963 Feb 12 10:16 input.tar.gz
[2026-02-12 10:23:40] -rw-r--r-- 2 boinc boinc     15845 Feb 12 10:16 start_atlas.sh
[2026-02-12 10:23:40] drwxrwx--x 2 boinc boinc      4096 Feb 12 10:16 shared
[2026-02-12 10:23:40] -rw-r--r-- 1 boinc boinc         0 Feb 12 10:16 boinc_setup_complete
[2026-02-12 10:23:40] -rw-r--r-- 1 boinc boinc      6376 Feb 12 10:16 init_data.xml
[2026-02-12 10:23:40] -rw-r--r-- 1 boinc boinc         0 Feb 12 10:16 boinc_lockfile
[2026-02-12 10:23:40] -rw-r--r-- 1 boinc boinc      2529 Feb 12 10:16 pandaJob.out
[2026-02-12 10:23:40] -rw------- 1 boinc boinc   1000188 Feb 12 10:16 agis_schedconf.cvmfs.json
[2026-02-12 10:23:40] -rw------- 1 boinc boinc   1512955 Feb 12 10:16 agis_ddmendpoints.agis.ALL.json
[2026-02-12 10:23:40] -rw------- 1 boinc boinc       421 Feb 12 10:16 workernode_map.json
[2026-02-12 10:23:40] drwx------ 5 boinc boinc      4096 Feb 12 10:16 pilot3
[2026-02-12 10:23:40] -rw-r--r-- 1 boinc boinc       525 Feb 12 10:20 boinc_task_state.xml
[2026-02-12 10:23:40] -rw------- 1 boinc boinc      1004 Feb 12 10:20 memory_monitor_summary.json
[2026-02-12 10:23:40] -rw------- 1 boinc boinc    140424 Feb 12 10:20 log.48442098._006552.job.log.tgz.1
[2026-02-12 10:23:40] -rw------- 1 boinc boinc        95 Feb 12 10:22 pilot_heartbeat.json
[2026-02-12 10:23:40] -rw------- 1 boinc boinc      7510 Feb 12 10:22 heartbeat.json
[2026-02-12 10:23:40] -rw-r--r-- 1 boinc boinc      8192 Feb 12 10:23 boinc_mmap_file
[2026-02-12 10:23:40] -rw-r--r-- 1 boinc boinc        23 Feb 12 10:23 wrapper_checkpoint.txt
[2026-02-12 10:23:40] -rw------- 1 boinc boinc      4552 Feb 12 10:23 pilotlog.txt
[2026-02-12 10:23:40] -rw------- 1 boinc boinc    110207 Feb 12 10:23 log.48442098._006552.job.log.1
[2026-02-12 10:23:40] -rw------- 1 boinc boinc       188 Feb 12 10:23 output.list
[2026-02-12 10:23:40] -rw-r--r-- 1 boinc boinc       620 Feb 12 10:23 runtime_log
[2026-02-12 10:23:40] -rw------- 1 boinc boinc    266240 Feb 12 10:23 result.tar.gz
[2026-02-12 10:23:40] -rw-r--r-- 1 boinc boinc      8743 Feb 12 10:23 runtime_log.err
[2026-02-12 10:23:40] -rw------- 1 boinc boinc       649 Feb 12 10:23 kvqNDm9JPA9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmpKkKDm74GsAn.diag
[2026-02-12 10:23:40] -rw-r--r-- 1 boinc boinc     22421 Feb 12 10:23 stderr.txt
[2026-02-12 10:23:40] No HITS result produced
[2026-02-12 10:23:40]  *** Contents of shared directory: ***
[2026-02-12 10:23:40] total 482300
[2026-02-12 10:23:40] -rw-r--r-- 2 boinc boinc 492987572 Feb 12 10:16 ATLAS.root_0
[2026-02-12 10:23:40] -rw-r--r-- 2 boinc boinc    597963 Feb 12 10:16 input.tar.gz
[2026-02-12 10:23:40] -rw-r--r-- 2 boinc boinc     15845 Feb 12 10:16 start_atlas.sh
[2026-02-12 10:23:40] -rw------- 1 boinc boinc    266240 Feb 12 10:23 result.tar.gz
10:23:41 (2669310): run_atlas exited; CPU time 94.866349
10:23:41 (2669310): called boinc_finish(0)

</stderr_txt>
]]>

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