Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:22:13 (1942746): wrapper (7.7.26015): starting
21:22:13 (1942746): wrapper: running run_atlas (--nthreads 6)
[2026-02-11 21:22:13] Arguments: --nthreads 6
[2026-02-11 21:22:13] Threads: 6
[2026-02-11 21:22:13] Checking for CVMFS
[2026-02-11 21:22:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 21:22:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 21:22:14] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 21:22:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 21:22:14] 2.13.3.0 6047 6173 54188 156128 3 49 2247868 4097025 0 130560 0 4752028 99.991 202405 7605 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-02-11 21:22:14] CVMFS is ok
[2026-02-11 21:22:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-11 21:22:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-11 21:22:14] Further information can be found at the LHC@home message board.
[2026-02-11 21:22:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 21:22:14] Checking for apptainer binary...
[2026-02-11 21:22:14] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2026-02-11 21:22:14] apptainer is not installed, using version from CVMFS
[2026-02-11 21:22:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 21:22:15] pckeatlas08
[2026-02-11 21:22:15] apptainer works
[2026-02-11 21:22:15] Set ATHENA_PROC_NUMBER=6
[2026-02-11 21:22:15] Set ATHENA_CORE_NUMBER=6
[2026-02-11 21:22:15] Starting ATLAS job with PandaID=7000585586
[2026-02-11 21:22:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-11 22:42:50]  *** The last 200 lines of the pilot log: ***
[2026-02-11 22:42:50]  guid=455250f6-d4cf-4ca1-bdaf-92f1bd5ae031
[2026-02-11 22:42:50]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-11 22:42:50]  is_altstaged=None
[2026-02-11 22:42:50]  is_tar=False
[2026-02-11 22:42:50]  lfn=log.48431096._005357.job.log.tgz.1
[2026-02-11 22:42:50]  mtime=0
[2026-02-11 22:42:50]  protocol_id=None
[2026-02-11 22:42:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-11 22:42:50]  replicas=None
[2026-02-11 22:42:50]  scope=mc23_13p6TeV
[2026-02-11 22:42:50]  status=None
[2026-02-11 22:42:50]  status_code=0
[2026-02-11 22:42:50]  storage_token=
[2026-02-11 22:42:50]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-7000585586/log.48431096._005357.job.log.tgz.1
[2026-02-11 22:42:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c5/88/log.48431096._005357.job.log.tgz.1
[2026-02-11 22:42:50]  workdir=None
[2026-02-11 22:42:50] ]
[2026-02-11 22:42:50] 2026-02-11 21:42:17,165 | INFO     | transferring file log.48431096._005357.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-7000585586/log.48431096._005357.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-02-11 22:42:50] 2026-02-11 21:42:17,165 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-7000585586/log.48431096._005357.job.log.tgz.1 /var/lib/boinc/slots/0/log.48431096._005357.job
[2026-02-11 22:42:50] 2026-02-11 21:42:17,172 | INFO     | adding to output.list: log.48431096._005357.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c5/88/log.48431096._005357.job.log.tg
[2026-02-11 22:42:50] 2026-02-11 21:42:17,173 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-11 22:42:50] 2026-02-11 21:42:17,173 | INFO     | summary of transferred files:
[2026-02-11 22:42:50] 2026-02-11 21:42:17,173 | INFO     |  -- lfn=log.48431096._005357.job.log.tgz.1, status_code=0, status=transferred
[2026-02-11 22:42:50] 2026-02-11 21:42:17,173 | INFO     | stage-out finished correctly
[2026-02-11 22:42:50] 2026-02-11 21:42:17,189 | INFO     | time since job start (4788s) is within the limit (349056.0s)
[2026-02-11 22:42:50] 2026-02-11 21:42:17,205 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-11 22:42:50] 2026-02-11 21:42:17,522 | INFO     | job 7000585586 has state=finished
[2026-02-11 22:42:50] 2026-02-11 21:42:17,523 | INFO     | preparing for final server update for job 7000585586 in state='finished'
[2026-02-11 22:42:50] 2026-02-11 21:42:17,523 | INFO     | reading metadata from: /var/lib/boinc/slots/0/PanDA_Pilot-7000585586/jobReport.json
[2026-02-11 22:42:50] 2026-02-11 21:42:17,528 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/0/workernode_map.json
[2026-02-11 22:42:50] 2026-02-11 21:42:17,529 | INFO     | this job has now completed (state=finished)
[2026-02-11 22:42:50] 2026-02-11 21:42:17,529 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-11 22:42:50] 2026-02-11 21:42:17,529 | INFO     | log transfer has been attempted: DONE
[2026-02-11 22:42:50] 2026-02-11 21:42:17,530 | INFO     | job 7000585586 has finished - writing final server update
[2026-02-11 22:42:50] 2026-02-11 21:42:17,530 | INFO     | total number of processed events: 400 (read)
[2026-02-11 22:42:50] 2026-02-11 21:42:17,534 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-7000585586/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 22:42:50] 2026-02-11 21:42:17,535 | INFO     | extracted standard info from prmon json
[2026-02-11 22:42:50] 2026-02-11 21:42:17,535 | INFO     | extracted standard memory fields from prmon json
[2026-02-11 22:42:50] 2026-02-11 21:42:17,536 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-11 22:42:50] 2026-02-11 21:42:17,536 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-11 22:42:50] 2026-02-11 21:42:17,537 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-11 22:42:50] 2026-02-11 21:42:17,540 | INFO     | fitting pss+swap vs Time
[2026-02-11 22:42:50] 2026-02-11 21:42:17,540 | INFO     | sum of square deviations: 115715658.0
[2026-02-11 22:42:50] 2026-02-11 21:42:17,541 | INFO     | sum of deviations: -13872028452.5
[2026-02-11 22:42:50] 2026-02-11 21:42:17,541 | INFO     | mean x: 1770843839.5
[2026-02-11 22:42:50] 2026-02-11 21:42:17,542 | INFO     | mean y: 2796825.8194444445
[2026-02-11 22:42:50] 2026-02-11 21:42:17,542 | INFO     | intersect: 212292097608.93683
[2026-02-11 22:42:50] 2026-02-11 21:42:17,542 | INFO     | chi2: 0.1250084227279455
[2026-02-11 22:42:50] 2026-02-11 21:42:17,543 | INFO     | current memory leak: -119.88 B/s (using 72 data points, chi2=0.13)
[2026-02-11 22:42:50] 2026-02-11 21:42:17,543 | INFO     | could have reported an average CPU frequency of 4144 MHz (6 samples)
[2026-02-11 22:42:50] 2026-02-11 21:42:17,543 | INFO     | ..............................
[2026-02-11 22:42:50] 2026-02-11 21:42:17,544 | INFO     | . Timing measurements:
[2026-02-11 22:42:50] 2026-02-11 21:42:17,544 | INFO     | . get job = 0 s
[2026-02-11 22:42:50] 2026-02-11 21:42:17,544 | INFO     | . initial setup = 5 s
[2026-02-11 22:42:50] 2026-02-11 21:42:17,544 | INFO     | . payload setup = 6 s
[2026-02-11 22:42:50] 2026-02-11 21:42:17,544 | INFO     | . stage-in = 0 s
[2026-02-11 22:42:50] 2026-02-11 21:42:17,544 | INFO     | . payload execution = 4766 s
[2026-02-11 22:42:50] 2026-02-11 21:42:17,545 | INFO     | . stage-out = 0 s
[2026-02-11 22:42:50] 2026-02-11 21:42:17,545 | INFO     | . log creation = 0 s
[2026-02-11 22:42:50] 2026-02-11 21:42:17,545 | INFO     | ..............................
[2026-02-11 22:42:50] 2026-02-11 21:42:17,920 | INFO     | 
[2026-02-11 22:42:50] 2026-02-11 21:42:17,920 | INFO     | job summary report
[2026-02-11 22:42:50] 2026-02-11 21:42:17,921 | INFO     | --------------------------------------------------
[2026-02-11 22:42:50] 2026-02-11 21:42:17,921 | INFO     | PanDA job id: 7000585586
[2026-02-11 22:42:50] 2026-02-11 21:42:17,921 | INFO     | task id: 48431096
[2026-02-11 22:42:50] 2026-02-11 21:42:17,921 | INFO     | errors: (none)
[2026-02-11 22:42:50] 2026-02-11 21:42:17,921 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-11 22:42:50] 2026-02-11 21:42:17,922 | INFO     | pilot state: finished 
[2026-02-11 22:42:50] 2026-02-11 21:42:17,922 | INFO     | transexitcode: 0
[2026-02-11 22:42:50] 2026-02-11 21:42:17,922 | INFO     | exeerrorcode: 0
[2026-02-11 22:42:50] 2026-02-11 21:42:17,922 | INFO     | exeerrordiag: 
[2026-02-11 22:42:50] 2026-02-11 21:42:17,922 | INFO     | exitcode: 0
[2026-02-11 22:42:50] 2026-02-11 21:42:17,922 | INFO     | exitmsg: OK
[2026-02-11 22:42:50] 2026-02-11 21:42:17,923 | INFO     | cpuconsumptiontime: 27382 s
[2026-02-11 22:42:50] 2026-02-11 21:42:17,923 | INFO     | nevents: 400
[2026-02-11 22:42:50] 2026-02-11 21:42:17,923 | INFO     | neventsw: 0
[2026-02-11 22:42:50] 2026-02-11 21:42:17,923 | INFO     | pid: 1951912
[2026-02-11 22:42:50] 2026-02-11 21:42:17,923 | INFO     | pgrp: 1951912
[2026-02-11 22:42:50] 2026-02-11 21:42:17,923 | INFO     | corecount: 6
[2026-02-11 22:42:50] 2026-02-11 21:42:17,924 | INFO     | event service: False
[2026-02-11 22:42:50] 2026-02-11 21:42:17,924 | INFO     | sizes: {0: 2281835, 1: 2282239, 11: 2282239, 4777: 2317574, 4778: 2317712}
[2026-02-11 22:42:50] 2026-02-11 21:42:17,924 | INFO     | --------------------------------------------------
[2026-02-11 22:42:50] 2026-02-11 21:42:17,924 | INFO     | 
[2026-02-11 22:42:50] 2026-02-11 21:42:17,924 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-02-11 22:42:50] 2026-02-11 21:42:17,934 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-11 22:42:50] 2026-02-11 21:42:17,934 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-11 22:42:50] 2026-02-11 21:42:17,934 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-11 22:42:50] 2026-02-11 21:42:17,935 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-11 22:42:50] 2026-02-11 21:42:17,935 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-11 22:42:50] 2026-02-11 21:42:17,935 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-11 22:42:50] 2026-02-11 21:42:17,935 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-11 22:42:50] 2026-02-11 21:42:17,935 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-11 22:42:50] 2026-02-11 21:42:17,935 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-11 22:42:50] 2026-02-11 21:42:17,935 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-11 22:42:50] 2026-02-11 21:42:17,935 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-11 22:42:50] 2026-02-11 21:42:17,935 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-11 22:42:50] 2026-02-11 21:42:17,935 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-11 22:42:50] 2026-02-11 21:42:17,935 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-11 22:42:50] 2026-02-11 21:42:17,935 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-11 22:42:50] 2026-02-11 21:42:17,935 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-11 22:42:50] 2026-02-11 21:42:17,935 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-11 22:42:50] 2026-02-11 21:42:17,935 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-11 22:42:50] 2026-02-11 21:42:17,935 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-11 22:42:50] 2026-02-11 21:42:17,935 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-11 22:42:50] 2026-02-11 21:42:17,935 | INFO     | job 7000585586 has completed (purged errors)
[2026-02-11 22:42:50] 2026-02-11 21:42:17,935 | INFO     | overall cleanup function is called
[2026-02-11 22:42:50] 2026-02-11 21:42:18,942 | INFO     | --- collectZombieJob: --- 10, [1951912]
[2026-02-11 22:42:50] 2026-02-11 21:42:18,942 | INFO     | zombie collector waiting for pid 1951912
[2026-02-11 22:42:50] 2026-02-11 21:42:18,943 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-11 22:42:50] 2026-02-11 21:42:18,943 | INFO     | collected zombie processes
[2026-02-11 22:42:50] 2026-02-11 21:42:18,943 | INFO     | will attempt to kill all subprocesses of pid=1951912
[2026-02-11 22:42:50] 2026-02-11 21:42:18,982 | INFO     | process IDs to be killed: [1951912] (in reverse order)
[2026-02-11 22:42:50] 2026-02-11 21:42:19,024 | WARNING  | found no corresponding commands to process id(s)
[2026-02-11 22:42:50] 2026-02-11 21:42:19,024 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-11 22:42:50] 2026-02-11 21:42:19,026 | INFO     | did not find any defunct processes belonging to 1951912
[2026-02-11 22:42:50] 2026-02-11 21:42:19,027 | INFO     | did not find any defunct processes belonging to 1951912
[2026-02-11 22:42:50] 2026-02-11 21:42:19,027 | INFO     | ready for new job
[2026-02-11 22:42:50] 2026-02-11 21:42:19,027 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-11 22:42:50] 2026-02-11 21:42:19,027 | INFO     | **************************************
[2026-02-11 22:42:50] 2026-02-11 21:42:19,028 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-11 22:42:50] 2026-02-11 21:42:19,028 | INFO     | **************************************
[2026-02-11 22:42:50] 2026-02-11 21:42:19,028 | INFO     | 
[2026-02-11 22:42:50] 2026-02-11 21:42:19,028 | INFO     | architecture information:
[2026-02-11 22:42:50] 2026-02-11 21:42:19,028 | INFO     | executing command: cat /etc/os-release
[2026-02-11 22:42:50] 2026-02-11 21:42:19,034 | INFO     | cat /etc/os-release:
[2026-02-11 22:42:50] NAME="CentOS Linux"
[2026-02-11 22:42:50] VERSION="7 (Core)"
[2026-02-11 22:42:50] ID="centos"
[2026-02-11 22:42:50] ID_LIKE="rhel fedora"
[2026-02-11 22:42:50] VERSION_ID="7"
[2026-02-11 22:42:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-11 22:42:50] ANSI_COLOR="0;31"
[2026-02-11 22:42:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-11 22:42:50] HOME_URL="https://www.centos.org/"
[2026-02-11 22:42:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-11 22:42:50] 
[2026-02-11 22:42:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-11 22:42:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-11 22:42:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-11 22:42:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-11 22:42:50] 
[2026-02-11 22:42:50] 2026-02-11 21:42:19,035 | INFO     | **************************************
[2026-02-11 22:42:50] 2026-02-11 21:42:19,538 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-02-11 22:42:50] 2026-02-11 21:42:19,548 | INFO     | sufficient remaining disk space (106946363392 B)
[2026-02-11 22:42:50] 2026-02-11 21:42:19,548 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-11 22:42:50] 2026-02-11 21:42:19,548 | INFO     | current server update state: UPDATING_FINAL
[2026-02-11 22:42:50] 2026-02-11 21:42:19,548 | INFO     | update_server=False
[2026-02-11 22:42:50] 2026-02-11 21:42:19,548 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-11 22:42:50] 2026-02-11 21:42:19,548 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-11 22:42:50] 2026-02-11 21:42:19,548 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-11 22:42:50] 2026-02-11 21:42:19,760 | WARNING  | process 1951912 can no longer be monitored (due to stat problems) - aborting
[2026-02-11 22:42:50] 2026-02-11 21:42:19,790 | INFO     | using path: /var/lib/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 22:42:50] 2026-02-11 21:42:19,826 | INFO     | number of running child processes to parent process 1951912: 1
[2026-02-11 22:42:50] 2026-02-11 21:42:19,826 | INFO     | maximum number of monitored processes: 6
[2026-02-11 22:42:50] 2026-02-11 21:42:19,826 | INFO     | aborting job monitoring since job object (job id=7000585586) has expired
[2026-02-11 22:42:50] 2026-02-11 21:42:19,826 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-11 22:42:50] 2026-02-11 21:42:19,826 | INFO     | will abort loop
[2026-02-11 22:42:50] 2026-02-11 21:42:19,910 | INFO     | all payload control threads have been joined
[2026-02-11 22:42:50] 2026-02-11 21:42:19,951 | INFO     | all job control threads have been joined
[2026-02-11 22:42:50] 2026-02-11 21:42:20,212 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-11 22:42:50] 2026-02-11 21:42:20,549 | INFO     | all data control threads have been joined
[2026-02-11 22:42:50] 2026-02-11 21:42:20,550 | INFO     | [job] retrieve thread has finished
[2026-02-11 22:42:50] 2026-02-11 21:42:20,553 | INFO     | [job] queue monitor thread has finished
[2026-02-11 22:42:50] 2026-02-11 21:42:20,573 | INFO     | [payload] validate_pre thread has finished
[2026-02-11 22:42:50] 2026-02-11 21:42:20,741 | INFO     | [data] copytool_in thread has finished
[2026-02-11 22:42:50] 2026-02-11 21:42:20,782 | INFO     | [payload] execute_payloads thread has finished
[2026-02-11 22:42:50] 2026-02-11 21:42:20,832 | INFO     | [job] job monitor thread has finished
[2026-02-11 22:42:50] 2026-02-11 21:42:20,915 | INFO     | [payload] control thread has finished
[2026-02-11 22:42:50] 2026-02-11 21:42:20,957 | INFO     | [job] control thread has finished
[2026-02-11 22:42:50] 2026-02-11 21:42:21,009 | INFO     | [payload] validate_post thread has finished
[2026-02-11 22:42:50] 2026-02-11 21:42:21,210 | INFO     | job.realtimelogging is not enabled
[2026-02-11 22:42:50] 2026-02-11 21:42:21,227 | INFO     | [payload] failed_post thread has finished
[2026-02-11 22:42:50] 2026-02-11 21:42:21,555 | INFO     | [data] control thread has finished
[2026-02-11 22:42:50] 2026-02-11 21:42:21,925 | INFO     | [job] validate thread has finished
[2026-02-11 22:42:50] 2026-02-11 21:42:22,033 | INFO     | [job] create_data_payload thread has finished
[2026-02-11 22:42:50] 2026-02-11 21:42:22,216 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-11 22:42:50] 2026-02-11 21:42:22,218 | INFO     | [data] copytool_out thread has finished
[2026-02-11 22:42:50] 2026-02-11 21:42:23,555 | INFO     | [data] queue_monitor thread has finished
[2026-02-11 22:42:50] 2026-02-11 21:42:36,649 | INFO     | [monitor] cgroup control has ended
[2026-02-11 22:42:50] 2026-02-11 21:42:37,611 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140029818795840)>', '<ExcThread(monitor, started 140029414336256)>']
[2026-02-11 22:42:50] 2026-02-11 21:42:42,637 | INFO     | all workflow threads have been joined
[2026-02-11 22:42:50] 2026-02-11 21:42:42,638 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-11 22:42:50] 2026-02-11 21:42:42,638 | INFO     | traces error code: 0
[2026-02-11 22:42:50] 2026-02-11 21:42:42,639 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-11 22:42:50] 2026-02-11 21:42:50,290 | INFO     | PID=1946763 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-11 22:42:50] 2026-02-11 21:42:50,291 | INFO     | found 0 job(s) in 20 queues
[2026-02-11 22:42:50] 2026-02-11 21:42:50,291 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-11 22:42:50] 2026-02-11 21:42:50,291 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-11 22:42:50] 2026-02-11 21:42:50,291 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-11 22:42:50] 2026-02-11 21:42:50,291 | INFO     | [monitor] control thread has ended
[2026-02-11 22:42:50] 2026-02-11 21:42:50,350 [wrapper] ==== pilot stdout END ====
[2026-02-11 22:42:50] 2026-02-11 21:42:50,351 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-11 22:42:50] 2026-02-11 21:42:50,352 [wrapper] pilotpid: 1946763
[2026-02-11 22:42:50] 2026-02-11 21:42:50,353 [wrapper] Pilot exit status: 0
[2026-02-11 22:42:50] 2026-02-11 21:42:50,358 [wrapper] pandaids: 7000585586
[2026-02-11 22:42:50] 2026-02-11 21:42:50,370 [wrapper] cleanup supervisor_pilot 1964294 1946764
[2026-02-11 22:42:50] 2026-02-11 21:42:50,371 [wrapper] Test setup, not cleaning
[2026-02-11 22:42:50] 2026-02-11 21:42:50,373 [wrapper] apfmon messages muted
[2026-02-11 22:42:50] 2026-02-11 21:42:50,374 [wrapper] ==== wrapper stdout END ====
[2026-02-11 22:42:50] 2026-02-11 21:42:50,375 [wrapper] ==== wrapper stderr END ====
[2026-02-11 22:42:50]  *** Error codes and diagnostics ***
[2026-02-11 22:42:50]     "exeErrorCode": 0,
[2026-02-11 22:42:50]     "exeErrorDiag": "",
[2026-02-11 22:42:50]     "pilotErrorCode": 0,
[2026-02-11 22:42:50]     "pilotErrorDiag": "",
[2026-02-11 22:42:50]  *** Listing of results directory ***
[2026-02-11 22:42:50] total 934632
[2026-02-11 22:42:50] -rw-r--r-- 1 boinc boinc    584422 Feb  4 02:26 pilot3.tar.gz
[2026-02-11 22:42:50] -rwx------ 1 boinc boinc     36322 Feb  4 02:28 runpilot2-wrapper.sh
[2026-02-11 22:42:50] -rw-r--r-- 1 boinc boinc      5111 Feb  4 02:29 queuedata.json
[2026-02-11 22:42:50] -rw-r--r-- 1 boinc boinc       100 Feb 11 21:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-11 22:42:50] -rwxr-xr-x 1 boinc boinc      7986 Feb 11 21:22 run_atlas
[2026-02-11 22:42:50] -rw-r--r-- 1 boinc boinc       105 Feb 11 21:22 job.xml
[2026-02-11 22:42:50] -rw-r--r-- 2 boinc boinc 668947928 Feb 11 21:22 EVNT.48431094._000133.pool.root.1
[2026-02-11 22:42:50] -rw-r--r-- 1 boinc boinc      6524 Feb 11 21:22 init_data.xml
[2026-02-11 22:42:50] drwxrwx--x 2 boinc boinc        68 Feb 11 21:22 shared
[2026-02-11 22:42:50] -rw-r--r-- 2 boinc boinc    597774 Feb 11 21:22 input.tar.gz
[2026-02-11 22:42:50] -rw-r--r-- 2 boinc boinc     15845 Feb 11 21:22 start_atlas.sh
[2026-02-11 22:42:50] -rw-r--r-- 1 boinc boinc         0 Feb 11 21:22 boinc_lockfile
[2026-02-11 22:42:50] -rw-r--r-- 1 boinc boinc      2554 Feb 11 21:22 pandaJob.out
[2026-02-11 22:42:50] -rw------- 1 boinc boinc   1005065 Feb 11 21:22 agis_schedconf.cvmfs.json
[2026-02-11 22:42:50] -rw------- 1 boinc boinc   1512955 Feb 11 21:22 agis_ddmendpoints.agis.ALL.json
[2026-02-11 22:42:50] -rw------- 1 boinc boinc       426 Feb 11 21:22 workernode_map.json
[2026-02-11 22:42:50] drwx------ 5 boinc boinc      4096 Feb 11 21:22 pilot3
[2026-02-11 22:42:50] -rw------- 1 boinc boinc 282117499 Feb 11 22:41 HITS.48431096._005357.pool.root.1
[2026-02-11 22:42:50] -rw-r--r-- 1 boinc boinc       530 Feb 11 22:42 boinc_task_state.xml
[2026-02-11 22:42:50] -rw------- 1 boinc boinc      1018 Feb 11 22:42 memory_monitor_summary.json
[2026-02-11 22:42:50] -rw------- 1 boinc boinc    336200 Feb 11 22:42 log.48431096._005357.job.log.tgz.1
[2026-02-11 22:42:50] -rw------- 1 boinc boinc      6332 Feb 11 22:42 heartbeat.json
[2026-02-11 22:42:50] -rw-r--r-- 1 boinc boinc      8192 Feb 11 22:42 boinc_mmap_file
[2026-02-11 22:42:50] -rw-r--r-- 1 boinc boinc        27 Feb 11 22:42 wrapper_checkpoint.txt
[2026-02-11 22:42:50] -rw------- 1 boinc boinc        95 Feb 11 22:42 pilot_heartbeat.json
[2026-02-11 22:42:50] -rw------- 1 boinc boinc       747 Feb 11 22:42 pilotlog.txt
[2026-02-11 22:42:50] -rw------- 1 boinc boinc    703407 Feb 11 22:42 log.48431096._005357.job.log.1
[2026-02-11 22:42:50] -rw------- 1 boinc boinc       357 Feb 11 22:42 output.list
[2026-02-11 22:42:50] -rw-r--r-- 1 boinc boinc       620 Feb 11 22:42 runtime_log
[2026-02-11 22:42:50] -rw------- 1 boinc boinc   1054720 Feb 11 22:42 result.tar.gz
[2026-02-11 22:42:50] -rw------- 1 boinc boinc       650 Feb 11 22:42 zymNDmWsg78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmiPWKDmoCYkrm.diag
[2026-02-11 22:42:50] -rw-r--r-- 1 boinc boinc      8829 Feb 11 22:42 runtime_log.err
[2026-02-11 22:42:50] -rw-r--r-- 1 boinc boinc     21458 Feb 11 22:42 stderr.txt
[2026-02-11 22:42:50] HITS file was successfully produced:
[2026-02-11 22:42:50] -rw------- 1 boinc boinc 282117499 Feb 11 22:41 shared/HITS.pool.root.1
[2026-02-11 22:42:50]  *** Contents of shared directory: ***
[2026-02-11 22:42:50] total 930412
[2026-02-11 22:42:50] -rw-r--r-- 2 boinc boinc 668947928 Feb 11 21:22 ATLAS.root_0
[2026-02-11 22:42:50] -rw-r--r-- 2 boinc boinc    597774 Feb 11 21:22 input.tar.gz
[2026-02-11 22:42:50] -rw-r--r-- 2 boinc boinc     15845 Feb 11 21:22 start_atlas.sh
[2026-02-11 22:42:50] -rw------- 1 boinc boinc 282117499 Feb 11 22:41 HITS.pool.root.1
[2026-02-11 22:42:50] -rw------- 1 boinc boinc   1054720 Feb 11 22:42 result.tar.gz
22:42:52 (1942746): run_atlas exited; CPU time 27403.733706
22:42:52 (1942746): called boinc_finish(0)

</stderr_txt>
]]>

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