Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:04:49 (7804): wrapper (7.7.26015): starting
22:04:49 (7804): wrapper: running run_atlas (--nthreads 8)
[2026-02-11 22:04:49] Arguments: --nthreads 8
[2026-02-11 22:04:49] Threads: 8
[2026-02-11 22:04:49] Checking for CVMFS
[2026-02-11 22:04:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 22:04:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 22:04:52] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 22:04:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 22:04:53] 2.11.2.0 820 83450 107732 156128 3 53 13535070 25165824 4884 130560 0 48866936 99.868 26735806 2443 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-11 22:04:53] CVMFS is ok
[2026-02-11 22:04:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 22:04:53] Checking for apptainer binary...
[2026-02-11 22:04:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-11 22:04:53] Running /usr/bin/apptainer --version
[2026-02-11 22:04:54] apptainer version 1.3.2-1.el7
[2026-02-11 22:04:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 22:05:03] cg-vwn494.simple-grid.lan
[2026-02-11 22:05:03] apptainer works
[2026-02-11 22:05:03] Set ATHENA_PROC_NUMBER=8
[2026-02-11 22:05:03] Set ATHENA_CORE_NUMBER=8
[2026-02-11 22:05:03] Starting ATLAS job with PandaID=7011260459
[2026-02-11 22:05:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 03:45:29]  *** The last 200 lines of the pilot log: ***
[2026-02-12 03:45:29] 2026-02-12 02:44:51,012 | INFO     | total number of processed events: 400 (read)
[2026-02-12 03:45:29] 2026-02-12 02:44:51,014 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-7011260459/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 03:45:29] 2026-02-12 02:44:51,015 | INFO     | extracted standard info from prmon json
[2026-02-12 03:45:29] 2026-02-12 02:44:51,015 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 03:45:29] 2026-02-12 02:44:51,015 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 03:45:29] 2026-02-12 02:44:51,015 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 03:45:29] 2026-02-12 02:44:51,015 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 03:45:29] 2026-02-12 02:44:51,022 | INFO     | fitting pss+swap vs Time
[2026-02-12 03:45:29] 2026-02-12 02:44:51,023 | INFO     | sum of square deviations: 10644478650.0
[2026-02-12 03:45:29] 2026-02-12 02:44:51,026 | INFO     | sum of deviations: 77782733458.00002
[2026-02-12 03:45:29] 2026-02-12 02:44:51,026 | INFO     | mean x: 1770854369.0
[2026-02-12 03:45:29] 2026-02-12 02:44:51,026 | INFO     | mean y: 2533357.716923077
[2026-02-12 03:45:29] 2026-02-12 02:44:51,027 | INFO     | intersect: -12937686441.29238
[2026-02-12 03:45:29] 2026-02-12 02:44:51,027 | INFO     | chi2: 7.343592899085188
[2026-02-12 03:45:29] 2026-02-12 02:44:51,028 | INFO     | sum of square deviations: 10160711440.0
[2026-02-12 03:45:29] 2026-02-12 02:44:51,031 | INFO     | sum of deviations: 98770236444.0
[2026-02-12 03:45:29] 2026-02-12 02:44:51,031 | INFO     | mean x: 1770854216.5
[2026-02-12 03:45:29] 2026-02-12 02:44:51,031 | INFO     | mean y: 2539886.775
[2026-02-12 03:45:29] 2026-02-12 02:44:51,032 | INFO     | intersect: -17211578504.87567
[2026-02-12 03:45:29] 2026-02-12 02:44:51,032 | INFO     | chi2: 6.620352623220751
[2026-02-12 03:45:29] 2026-02-12 02:44:51,032 | INFO     | current chi2=6.620352623220751 (change=9.848588910130527 %)
[2026-02-12 03:45:29] 2026-02-12 02:44:51,032 | INFO     | right removable region: 319
[2026-02-12 03:45:29] 2026-02-12 02:44:51,033 | INFO     | sum of square deviations: 10160711440.0
[2026-02-12 03:45:29] 2026-02-12 02:44:51,036 | INFO     | sum of deviations: -38477673421.5
[2026-02-12 03:45:29] 2026-02-12 02:44:51,036 | INFO     | mean x: 1770854521.5
[2026-02-12 03:45:29] 2026-02-12 02:44:51,036 | INFO     | mean y: 2569985.728125
[2026-02-12 03:45:29] 2026-02-12 02:44:51,036 | INFO     | intersect: 6708632091.480008
[2026-02-12 03:45:29] 2026-02-12 02:44:51,037 | INFO     | chi2: 2.6238426589337096
[2026-02-12 03:45:29] 2026-02-12 02:44:51,037 | INFO     | current chi2=2.6238426589337096 (change=64.27031434081036 %)
[2026-02-12 03:45:29] 2026-02-12 02:44:51,037 | INFO     | sum of square deviations: 9691828230.0
[2026-02-12 03:45:29] 2026-02-12 02:44:51,041 | INFO     | sum of deviations: -98245215117.0
[2026-02-12 03:45:29] 2026-02-12 02:44:51,042 | INFO     | mean x: 1770854674.0
[2026-02-12 03:45:29] 2026-02-12 02:44:51,042 | INFO     | mean y: 2589333.9777777777
[2026-02-12 03:45:29] 2026-02-12 02:44:51,042 | INFO     | intersect: 17953588284.778923
[2026-02-12 03:45:29] 2026-02-12 02:44:51,042 | INFO     | chi2: 1.0684735831844165
[2026-02-12 03:45:29] 2026-02-12 02:44:51,043 | INFO     | current chi2=1.0684735831844165 (change=59.27829058093642 %)
[2026-02-12 03:45:29] 2026-02-12 02:44:51,043 | INFO     | sum of square deviations: 9237596457.5
[2026-02-12 03:45:29] 2026-02-12 02:44:51,046 | INFO     | sum of deviations: -101249508640.50002
[2026-02-12 03:45:29] 2026-02-12 02:44:51,047 | INFO     | mean x: 1770854826.5
[2026-02-12 03:45:29] 2026-02-12 02:44:51,047 | INFO     | mean y: 2590325.4741935483
[2026-02-12 03:45:29] 2026-02-12 02:44:51,047 | INFO     | intersect: 19412204274.48046
[2026-02-12 03:45:29] 2026-02-12 02:44:51,047 | INFO     | chi2: 1.0404569614189576
[2026-02-12 03:45:29] 2026-02-12 02:44:51,047 | INFO     | current chi2=1.0404569614189576 (change=2.622116466554075 %)
[2026-02-12 03:45:29] 2026-02-12 02:44:51,048 | INFO     | left removable region: 30
[2026-02-12 03:45:29] 2026-02-12 02:44:51,048 | INFO     | sum of square deviations: 7484568240.0
[2026-02-12 03:45:29] 2026-02-12 02:44:51,051 | INFO     | sum of deviations: -51588618660.00001
[2026-02-12 03:45:29] 2026-02-12 02:44:51,051 | INFO     | mean x: 1770855101.0
[2026-02-12 03:45:29] 2026-02-12 02:44:51,051 | INFO     | mean y: 2588224.8442906574
[2026-02-12 03:45:29] 2026-02-12 02:44:51,051 | INFO     | intersect: 12208498516.284801
[2026-02-12 03:45:29] 2026-02-12 02:44:51,052 | INFO     | chi2: 0.21950122944503137
[2026-02-12 03:45:29] 2026-02-12 02:44:51,052 | INFO     | current memory leak: -6.89 B/s (using 289 data points, chi2=0.22)
[2026-02-12 03:45:29] 2026-02-12 02:44:51,052 | INFO     | could have reported an average CPU frequency of 2249 MHz (15 samples)
[2026-02-12 03:45:29] 2026-02-12 02:44:51,053 | INFO     | ..............................
[2026-02-12 03:45:29] 2026-02-12 02:44:51,053 | INFO     | . Timing measurements:
[2026-02-12 03:45:29] 2026-02-12 02:44:51,053 | INFO     | . get job = 0 s
[2026-02-12 03:45:29] 2026-02-12 02:44:51,053 | INFO     | . initial setup = 95 s
[2026-02-12 03:45:29] 2026-02-12 02:44:51,053 | INFO     | . payload setup = 133 s
[2026-02-12 03:45:29] 2026-02-12 02:44:51,053 | INFO     | . stage-in = 0 s
[2026-02-12 03:45:29] 2026-02-12 02:44:51,053 | INFO     | . payload execution = 19912 s
[2026-02-12 03:45:29] 2026-02-12 02:44:51,053 | INFO     | . stage-out = 2 s
[2026-02-12 03:45:29] 2026-02-12 02:44:51,053 | INFO     | . log creation = 1 s
[2026-02-12 03:45:29] 2026-02-12 02:44:51,053 | INFO     | ..............................
[2026-02-12 03:45:29] 2026-02-12 02:44:51,649 | INFO     | 
[2026-02-12 03:45:29] 2026-02-12 02:44:51,649 | INFO     | job summary report
[2026-02-12 03:45:29] 2026-02-12 02:44:51,650 | INFO     | --------------------------------------------------
[2026-02-12 03:45:29] 2026-02-12 02:44:51,650 | INFO     | PanDA job id: 7011260459
[2026-02-12 03:45:29] 2026-02-12 02:44:51,650 | INFO     | task id: 48431096
[2026-02-12 03:45:29] 2026-02-12 02:44:51,650 | INFO     | errors: (none)
[2026-02-12 03:45:29] 2026-02-12 02:44:51,650 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 03:45:29] 2026-02-12 02:44:51,650 | INFO     | pilot state: finished 
[2026-02-12 03:45:29] 2026-02-12 02:44:51,650 | INFO     | transexitcode: 0
[2026-02-12 03:45:29] 2026-02-12 02:44:51,650 | INFO     | exeerrorcode: 0
[2026-02-12 03:45:29] 2026-02-12 02:44:51,650 | INFO     | exeerrordiag: 
[2026-02-12 03:45:29] 2026-02-12 02:44:51,650 | INFO     | exitcode: 0
[2026-02-12 03:45:29] 2026-02-12 02:44:51,651 | INFO     | exitmsg: OK
[2026-02-12 03:45:29] 2026-02-12 02:44:51,651 | INFO     | cpuconsumptiontime: 77217 s
[2026-02-12 03:45:29] 2026-02-12 02:44:51,651 | INFO     | nevents: 400
[2026-02-12 03:45:29] 2026-02-12 02:44:51,651 | INFO     | neventsw: 0
[2026-02-12 03:45:29] 2026-02-12 02:44:51,651 | INFO     | pid: 16421
[2026-02-12 03:45:29] 2026-02-12 02:44:51,651 | INFO     | pgrp: 16421
[2026-02-12 03:45:29] 2026-02-12 02:44:51,651 | INFO     | corecount: 8
[2026-02-12 03:45:29] 2026-02-12 02:44:51,651 | INFO     | event service: False
[2026-02-12 03:45:29] 2026-02-12 02:44:51,651 | INFO     | sizes: {0: 2281780, 1: 2282181, 2: 2282241, 12: 2282269, 20050: 2315633, 20053: 2324631, 20054: 2325009}
[2026-02-12 03:45:29] 2026-02-12 02:44:51,651 | INFO     | --------------------------------------------------
[2026-02-12 03:45:29] 2026-02-12 02:44:51,652 | INFO     | 
[2026-02-12 03:45:29] 2026-02-12 02:44:51,652 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-02-12 03:45:29] 2026-02-12 02:44:51,943 | INFO     | time since job start (20066s) is within the limit (349056.0s)
[2026-02-12 03:45:29] 2026-02-12 02:44:52,218 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 03:45:29] 2026-02-12 02:44:52,218 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 03:45:29] 2026-02-12 02:44:52,218 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 03:45:29] 2026-02-12 02:44:52,218 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 03:45:29] 2026-02-12 02:44:52,218 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 03:45:29] 2026-02-12 02:44:52,218 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 03:45:29] 2026-02-12 02:44:52,218 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 03:45:29] 2026-02-12 02:44:52,218 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 03:45:29] 2026-02-12 02:44:52,218 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 03:45:29] 2026-02-12 02:44:52,219 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 03:45:29] 2026-02-12 02:44:52,219 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 03:45:29] 2026-02-12 02:44:52,219 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 03:45:29] 2026-02-12 02:44:52,219 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 03:45:29] 2026-02-12 02:44:52,219 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 03:45:29] 2026-02-12 02:44:52,219 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 03:45:29] 2026-02-12 02:44:52,219 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 03:45:29] 2026-02-12 02:44:52,219 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 03:45:29] 2026-02-12 02:44:52,219 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 03:45:29] 2026-02-12 02:44:52,219 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 03:45:29] 2026-02-12 02:44:52,220 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 03:45:29] 2026-02-12 02:44:52,220 | INFO     | job 7011260459 has completed (purged errors)
[2026-02-12 03:45:29] 2026-02-12 02:44:52,220 | INFO     | overall cleanup function is called
[2026-02-12 03:45:29] 2026-02-12 02:44:53,228 | INFO     | --- collectZombieJob: --- 10, [16421]
[2026-02-12 03:45:29] 2026-02-12 02:44:53,228 | INFO     | zombie collector waiting for pid 16421
[2026-02-12 03:45:29] 2026-02-12 02:44:53,229 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 03:45:29] 2026-02-12 02:44:53,229 | INFO     | collected zombie processes
[2026-02-12 03:45:29] 2026-02-12 02:44:53,229 | INFO     | will attempt to kill all subprocesses of pid=16421
[2026-02-12 03:45:29] 2026-02-12 02:44:53,345 | INFO     | process IDs to be killed: [16421] (in reverse order)
[2026-02-12 03:45:29] 2026-02-12 02:44:54,093 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 03:45:29] 2026-02-12 02:44:54,093 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 03:45:29] 2026-02-12 02:44:54,096 | INFO     | did not find any defunct processes belonging to 16421
[2026-02-12 03:45:29] 2026-02-12 02:44:54,099 | INFO     | did not find any defunct processes belonging to 16421
[2026-02-12 03:45:29] 2026-02-12 02:44:54,099 | INFO     | ready for new job
[2026-02-12 03:45:29] 2026-02-12 02:44:54,099 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 03:45:29] 2026-02-12 02:44:54,102 | INFO     | **************************************
[2026-02-12 03:45:29] 2026-02-12 02:44:54,102 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 03:45:29] 2026-02-12 02:44:54,102 | INFO     | **************************************
[2026-02-12 03:45:29] 2026-02-12 02:44:54,102 | INFO     | 
[2026-02-12 03:45:29] 2026-02-12 02:44:54,103 | INFO     | pilot is running in a VM
[2026-02-12 03:45:29] 2026-02-12 02:44:54,103 | INFO     | architecture information:
[2026-02-12 03:45:29] 2026-02-12 02:44:54,105 | INFO     | executing command: cat /etc/os-release
[2026-02-12 03:45:29] 2026-02-12 02:44:54,316 | INFO     | cat /etc/os-release:
[2026-02-12 03:45:29] NAME="CentOS Linux"
[2026-02-12 03:45:29] VERSION="7 (Core)"
[2026-02-12 03:45:29] ID="centos"
[2026-02-12 03:45:29] ID_LIKE="rhel fedora"
[2026-02-12 03:45:29] VERSION_ID="7"
[2026-02-12 03:45:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 03:45:29] ANSI_COLOR="0;31"
[2026-02-12 03:45:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 03:45:29] HOME_URL="https://www.centos.org/"
[2026-02-12 03:45:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 03:45:29] 
[2026-02-12 03:45:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 03:45:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 03:45:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 03:45:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 03:45:29] 
[2026-02-12 03:45:29] 2026-02-12 02:44:54,316 | INFO     | **************************************
[2026-02-12 03:45:29] 2026-02-12 02:44:54,819 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-02-12 03:45:29] 2026-02-12 02:44:55,032 | INFO     | sufficient remaining disk space (495125004288 B)
[2026-02-12 03:45:29] 2026-02-12 02:44:55,032 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 03:45:29] 2026-02-12 02:44:55,032 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 03:45:29] 2026-02-12 02:44:55,032 | INFO     | update_server=False
[2026-02-12 03:45:29] 2026-02-12 02:44:55,033 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 03:45:29] 2026-02-12 02:44:55,091 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 03:45:29] 2026-02-12 02:44:55,092 | INFO     | aborting loop
[2026-02-12 03:45:29] 2026-02-12 02:44:55,552 | INFO     | all payload control threads have been joined
[2026-02-12 03:45:29] 2026-02-12 02:44:55,768 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 03:45:29] 2026-02-12 02:44:56,026 | INFO     | all data control threads have been joined
[2026-02-12 03:45:29] 2026-02-12 02:44:56,038 | INFO     | [job] retrieve thread has finished
[2026-02-12 03:45:29] 2026-02-12 02:44:56,097 | INFO     | [job] job monitor thread has finished
[2026-02-12 03:45:29] 2026-02-12 02:44:56,163 | INFO     | [payload] validate_post thread has finished
[2026-02-12 03:45:29] 2026-02-12 02:44:56,206 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 03:45:29] 2026-02-12 02:44:56,366 | INFO     | all job control threads have been joined
[2026-02-12 03:45:29] 2026-02-12 02:44:56,558 | INFO     | [payload] control thread has finished
[2026-02-12 03:45:29] 2026-02-12 02:44:56,589 | INFO     | [job] validate thread has finished
[2026-02-12 03:45:29] 2026-02-12 02:44:56,625 | INFO     | [data] copytool_in thread has finished
[2026-02-12 03:45:29] 2026-02-12 02:44:56,655 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 03:45:29] 2026-02-12 02:44:56,758 | INFO     | [payload] failed_post thread has finished
[2026-02-12 03:45:29] 2026-02-12 02:44:57,011 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 03:45:29] 2026-02-12 02:44:57,020 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 03:45:29] 2026-02-12 02:44:57,021 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 03:45:29] 2026-02-12 02:44:57,032 | INFO     | [data] control thread has finished
[2026-02-12 03:45:29] 2026-02-12 02:44:57,181 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 03:45:29] 2026-02-12 02:44:57,211 | INFO     | [job] queue monitor thread has finished
[2026-02-12 03:45:29] 2026-02-12 02:44:57,372 | INFO     | [job] control thread has finished
[2026-02-12 03:45:29] 2026-02-12 02:44:57,775 | INFO     | [data] copytool_out thread has finished
[2026-02-12 03:45:29] 2026-02-12 02:44:59,139 | INFO     | [monitor] cgroup control has ended
[2026-02-12 03:45:29] 2026-02-12 02:45:01,030 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 03:45:29] 2026-02-12 02:45:01,952 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140310730774336)>', '<ExcThread(monitor, started 140310424295168)>']
[2026-02-12 03:45:29] 2026-02-12 02:45:06,978 | INFO     | all workflow threads have been joined
[2026-02-12 03:45:29] 2026-02-12 02:45:06,978 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 03:45:29] 2026-02-12 02:45:06,979 | INFO     | traces error code: 0
[2026-02-12 03:45:29] 2026-02-12 02:45:06,979 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 03:45:29] 2026-02-12 02:45:25,187 | INFO     | PID=11934 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-12 03:45:29] 2026-02-12 02:45:25,187 | INFO     | .. there are 9 such processes running
[2026-02-12 03:45:29] 2026-02-12 02:45:25,187 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 03:45:29] 2026-02-12 02:45:25,187 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 03:45:29] 2026-02-12 02:45:25,188 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 03:45:29] 2026-02-12 02:45:25,188 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 03:45:29] 2026-02-12 02:45:25,188 | CRITICAL | thread 'MainThread' is not alive
[2026-02-12 03:45:29] 2026-02-12 02:45:25,188 | INFO     | [monitor] control thread has ended
[2026-02-12 03:45:29] 2026-02-12 02:45:25,521 [wrapper] ==== pilot stdout END ====
[2026-02-12 03:45:29] 2026-02-12 02:45:25,642 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 03:45:29] 2026-02-12 02:45:25,763 [wrapper] pilotpid: 11934
[2026-02-12 03:45:29] 2026-02-12 02:45:25,873 [wrapper] Pilot exit status: 0
[2026-02-12 03:45:29] 2026-02-12 02:45:26,243 [wrapper] pandaids: 7011260459
[2026-02-12 03:45:29] 2026-02-12 02:45:27,005 [wrapper] cleanup supervisor_pilot  9744 11935
[2026-02-12 03:45:29] 2026-02-12 02:45:27,060 [wrapper] Test setup, not cleaning
[2026-02-12 03:45:29] 2026-02-12 02:45:27,103 [wrapper] apfmon messages muted
[2026-02-12 03:45:29] 2026-02-12 02:45:27,170 [wrapper] ==== wrapper stdout END ====
[2026-02-12 03:45:29] 2026-02-12 02:45:27,245 [wrapper] ==== wrapper stderr END ====
[2026-02-12 03:45:29]  *** Error codes and diagnostics ***
[2026-02-12 03:45:29]     "exeErrorCode": 0,
[2026-02-12 03:45:29]     "exeErrorDiag": "",
[2026-02-12 03:45:29]     "pilotErrorCode": 0,
[2026-02-12 03:45:29]     "pilotErrorDiag": "",
[2026-02-12 03:45:29]  *** Listing of results directory ***
[2026-02-12 03:45:29] total 949640
[2026-02-12 03:45:29] -rw-r--r--. 1 boinc boinc    584627 Feb 11 00:51 pilot3.tar.gz
[2026-02-12 03:45:29] -rwx------. 1 boinc boinc     36322 Feb 11 00:51 runpilot2-wrapper.sh
[2026-02-12 03:45:29] -rw-r--r--. 1 boinc boinc      5111 Feb 11 00:52 queuedata.json
[2026-02-12 03:45:29] -rw-r--r--. 1 boinc boinc       100 Feb 11 22:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 03:45:29] -rwxr-xr-x. 1 boinc boinc      7986 Feb 11 22:04 run_atlas
[2026-02-12 03:45:29] -rw-r--r--. 1 boinc boinc       105 Feb 11 22:04 job.xml
[2026-02-12 03:45:29] -rw-r--r--. 2 boinc boinc 682673671 Feb 11 22:04 EVNT.48431094._000555.pool.root.1
[2026-02-12 03:45:29] drwxrwx--x. 2 boinc boinc        68 Feb 11 22:04 shared
[2026-02-12 03:45:29] -rw-r--r--. 2 boinc boinc    597962 Feb 11 22:04 input.tar.gz
[2026-02-12 03:45:29] -rw-r--r--. 1 boinc boinc      6390 Feb 11 22:04 init_data.xml
[2026-02-12 03:45:29] -rw-r--r--. 2 boinc boinc     15845 Feb 11 22:04 start_atlas.sh
[2026-02-12 03:45:29] -rw-r--r--. 1 boinc boinc         0 Feb 11 22:04 boinc_lockfile
[2026-02-12 03:45:29] -rw-r--r--. 1 boinc boinc      2555 Feb 11 22:05 pandaJob.out
[2026-02-12 03:45:29] -rw-------. 1 boinc boinc       415 Feb 11 22:10 workernode_map.json
[2026-02-12 03:45:29] -rw-------. 1 boinc boinc   1005065 Feb 11 22:10 agis_schedconf.cvmfs.json
[2026-02-12 03:45:29] drwx------. 5 boinc boinc      4096 Feb 11 22:10 pilot3
[2026-02-12 03:45:29] -rw-------. 1 boinc boinc 279210825 Feb 12 03:43 HITS.48431096._025687.pool.root.1
[2026-02-12 03:45:29] -rw-r--r--. 1 boinc boinc       531 Feb 12 03:44 boinc_task_state.xml
[2026-02-12 03:45:29] -rw-------. 1 boinc boinc        95 Feb 12 03:44 pilot_heartbeat.json
[2026-02-12 03:45:29] -rw-------. 1 boinc boinc      1015 Feb 12 03:44 memory_monitor_summary.json
[2026-02-12 03:45:29] -rw-------. 1 boinc boinc   1512955 Feb 12 03:44 agis_ddmendpoints.agis.ALL.json
[2026-02-12 03:45:29] -rw-------. 1 boinc boinc    528993 Feb 12 03:44 log.48431096._025687.job.log.tgz.1
[2026-02-12 03:45:29] -rw-------. 1 boinc boinc      6332 Feb 12 03:44 heartbeat.json
[2026-02-12 03:45:29] -rw-------. 1 boinc boinc       890 Feb 12 03:45 pilotlog.txt
[2026-02-12 03:45:29] -rw-r--r--. 1 boinc boinc      8192 Feb 12 03:45 boinc_mmap_file
[2026-02-12 03:45:29] -rw-r--r--. 1 boinc boinc        28 Feb 12 03:45 wrapper_checkpoint.txt
[2026-02-12 03:45:29] -rw-------. 1 boinc boinc   2785854 Feb 12 03:45 log.48431096._025687.job.log.1
[2026-02-12 03:45:29] -rw-------. 1 boinc boinc       357 Feb 12 03:45 output.list
[2026-02-12 03:45:29] -rw-r--r--. 1 boinc boinc       620 Feb 12 03:45 runtime_log
[2026-02-12 03:45:29] -rw-------. 1 boinc boinc   3328000 Feb 12 03:45 result.tar.gz
[2026-02-12 03:45:29] -rw-r--r--. 1 boinc boinc      8816 Feb 12 03:45 runtime_log.err
[2026-02-12 03:45:29] -rw-------. 1 boinc boinc       656 Feb 12 03:45 qRvNDmOhCA9n9Rq4apOajLDm4fhM0noT9bVooX4SDmyLiKDmuJyiAo.diag
[2026-02-12 03:45:29] -rw-r--r--. 1 boinc boinc     20674 Feb 12 03:45 stderr.txt
[2026-02-12 03:45:29] HITS file was successfully produced:
[2026-02-12 03:45:29] -rw-------. 1 boinc boinc 279210825 Feb 12 03:43 shared/HITS.pool.root.1
[2026-02-12 03:45:29]  *** Contents of shared directory: ***
[2026-02-12 03:45:29] total 943196
[2026-02-12 03:45:29] -rw-r--r--. 2 boinc boinc 682673671 Feb 11 22:04 ATLAS.root_0
[2026-02-12 03:45:29] -rw-r--r--. 2 boinc boinc    597962 Feb 11 22:04 input.tar.gz
[2026-02-12 03:45:29] -rw-r--r--. 2 boinc boinc     15845 Feb 11 22:04 start_atlas.sh
[2026-02-12 03:45:29] -rw-------. 1 boinc boinc 279210825 Feb 12 03:43 HITS.pool.root.1
[2026-02-12 03:45:29] -rw-------. 1 boinc boinc   3328000 Feb 12 03:45 result.tar.gz
03:45:31 (7804): run_atlas exited; CPU time 77507.042896
03:45:31 (7804): called boinc_finish(0)

</stderr_txt>
]]>

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