Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:35:42 (15832): wrapper (7.7.26015): starting
19:35:42 (15832): wrapper: running run_atlas (--nthreads 8)
[2026-02-11 19:35:42] Arguments: --nthreads 8
[2026-02-11 19:35:42] Threads: 8
[2026-02-11 19:35:42] Checking for CVMFS
[2026-02-11 19:35:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 19:35:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 19:35:44] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 19:35:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 19:35:45] 2.11.2.0 13652 83290 134780 156125 3 55 23429143 25165825 899 130560 0 30222744 99.837 18327243 2881 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-11 19:35:45] CVMFS is ok
[2026-02-11 19:35:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 19:35:45] Checking for apptainer binary...
[2026-02-11 19:35:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-11 19:35:45] Running /usr/bin/apptainer --version
[2026-02-11 19:35:45] apptainer version 1.3.2-1.el7
[2026-02-11 19:35:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 19:35:52] cg-vwn453.simple-grid.lan
[2026-02-11 19:35:52] apptainer works
[2026-02-11 19:35:52] Set ATHENA_PROC_NUMBER=8
[2026-02-11 19:35:52] Set ATHENA_CORE_NUMBER=8
[2026-02-11 19:35:52] Starting ATLAS job with PandaID=6993747140
[2026-02-11 19:35:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-11 23:58:50]  *** The last 200 lines of the pilot log: ***
[2026-02-11 23:58:50] 2026-02-11 22:58:03,054 | INFO     | log transfer has been attempted: DONE
[2026-02-11 23:58:50] 2026-02-11 22:58:03,054 | INFO     | job 6993747140 has finished - writing final server update
[2026-02-11 23:58:50] 2026-02-11 22:58:03,054 | INFO     | total number of processed events: 400 (read)
[2026-02-11 23:58:50] 2026-02-11 22:58:03,056 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6993747140/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 23:58:50] 2026-02-11 22:58:03,057 | INFO     | extracted standard info from prmon json
[2026-02-11 23:58:50] 2026-02-11 22:58:03,057 | INFO     | extracted standard memory fields from prmon json
[2026-02-11 23:58:50] 2026-02-11 22:58:03,057 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-11 23:58:50] 2026-02-11 22:58:03,058 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-11 23:58:50] 2026-02-11 22:58:03,058 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-11 23:58:50] 2026-02-11 22:58:03,062 | INFO     | fitting pss+swap vs Time
[2026-02-11 23:58:50] 2026-02-11 22:58:03,063 | INFO     | sum of square deviations: 4672638308.0
[2026-02-11 23:58:50] 2026-02-11 22:58:03,065 | INFO     | sum of deviations: 126492396179.00003
[2026-02-11 23:58:50] 2026-02-11 22:58:03,065 | INFO     | mean x: 1770843148.0
[2026-02-11 23:58:50] 2026-02-11 22:58:03,066 | INFO     | mean y: 2413754.7246963563
[2026-02-11 23:58:50] 2026-02-11 22:58:03,066 | INFO     | intersect: -47935855437.68796
[2026-02-11 23:58:50] 2026-02-11 22:58:03,066 | INFO     | chi2: 7.716153099086132
[2026-02-11 23:58:50] 2026-02-11 22:58:03,067 | INFO     | sum of square deviations: 4394577280.5
[2026-02-11 23:58:50] 2026-02-11 22:58:03,069 | INFO     | sum of deviations: 139741991001.49997
[2026-02-11 23:58:50] 2026-02-11 22:58:03,069 | INFO     | mean x: 1770842995.5
[2026-02-11 23:58:50] 2026-02-11 22:58:03,069 | INFO     | mean y: 2420874.714876033
[2026-02-11 23:58:50] 2026-02-11 22:58:03,069 | INFO     | intersect: -56308143292.6935
[2026-02-11 23:58:50] 2026-02-11 22:58:03,070 | INFO     | chi2: 7.005406819677721
[2026-02-11 23:58:50] 2026-02-11 22:58:03,070 | INFO     | current chi2=7.005406819677721 (change=9.211147968183631 %)
[2026-02-11 23:58:50] 2026-02-11 22:58:03,070 | INFO     | right removable region: 241
[2026-02-11 23:58:50] 2026-02-11 22:58:03,070 | INFO     | sum of square deviations: 4394577280.5
[2026-02-11 23:58:50] 2026-02-11 22:58:03,072 | INFO     | sum of deviations: 41367983626.00001
[2026-02-11 23:58:50] 2026-02-11 22:58:03,073 | INFO     | mean x: 1770843300.5
[2026-02-11 23:58:50] 2026-02-11 22:58:03,073 | INFO     | mean y: 2460410.785123967
[2026-02-11 23:58:50] 2026-02-11 22:58:03,073 | INFO     | intersect: -16667224062.475742
[2026-02-11 23:58:50] 2026-02-11 22:58:03,073 | INFO     | chi2: 2.8099745305024864
[2026-02-11 23:58:50] 2026-02-11 22:58:03,073 | INFO     | current chi2=2.8099745305024864 (change=63.583219585996964 %)
[2026-02-11 23:58:50] 2026-02-11 22:58:03,074 | INFO     | sum of square deviations: 4127772278.0
[2026-02-11 23:58:50] 2026-02-11 22:58:03,076 | INFO     | sum of deviations: -11514066590.0
[2026-02-11 23:58:50] 2026-02-11 22:58:03,076 | INFO     | mean x: 1770843453.0
[2026-02-11 23:58:50] 2026-02-11 22:58:03,076 | INFO     | mean y: 2490520.430379747
[2026-02-11 23:58:50] 2026-02-11 22:58:03,076 | INFO     | intersect: 4942106387.075709
[2026-02-11 23:58:50] 2026-02-11 22:58:03,077 | INFO     | chi2: 0.8532993730672191
[2026-02-11 23:58:50] 2026-02-11 22:58:03,077 | INFO     | current chi2=0.8532993730672191 (change=69.63319902708763 %)
[2026-02-11 23:58:50] 2026-02-11 22:58:03,077 | INFO     | sum of square deviations: 3871990738.0
[2026-02-11 23:58:50] 2026-02-11 22:58:03,079 | INFO     | sum of deviations: -16337599927.0
[2026-02-11 23:58:50] 2026-02-11 22:58:03,079 | INFO     | mean x: 1770843605.5
[2026-02-11 23:58:50] 2026-02-11 22:58:03,080 | INFO     | mean y: 2493376.0086206896
[2026-02-11 23:58:50] 2026-02-11 22:58:03,080 | INFO     | intersect: 7474446776.106144
[2026-02-11 23:58:50] 2026-02-11 22:58:03,080 | INFO     | chi2: 0.8292773358767139
[2026-02-11 23:58:50] 2026-02-11 22:58:03,080 | INFO     | current chi2=0.8292773358767139 (change=2.8151945200846726 %)
[2026-02-11 23:58:50] 2026-02-11 22:58:03,080 | INFO     | left removable region: 30
[2026-02-11 23:58:50] 2026-02-11 22:58:03,081 | INFO     | sum of square deviations: 2912836010.0
[2026-02-11 23:58:50] 2026-02-11 22:58:03,082 | INFO     | sum of deviations: 4127026370.0000005
[2026-02-11 23:58:50] 2026-02-11 22:58:03,082 | INFO     | mean x: 1770843880.0
[2026-02-11 23:58:50] 2026-02-11 22:58:03,082 | INFO     | mean y: 2499336.3886255925
[2026-02-11 23:58:50] 2026-02-11 22:58:03,083 | INFO     | intersect: -2506505415.2771287
[2026-02-11 23:58:50] 2026-02-11 22:58:03,083 | INFO     | chi2: 0.00016206735913339412
[2026-02-11 23:58:50] 2026-02-11 22:58:03,083 | INFO     | current memory leak: 1.42 B/s (using 211 data points, chi2=0.00)
[2026-02-11 23:58:50] 2026-02-11 22:58:03,084 | INFO     | could have reported an average CPU frequency of 2250 MHz (12 samples)
[2026-02-11 23:58:50] 2026-02-11 22:58:03,084 | INFO     | ..............................
[2026-02-11 23:58:50] 2026-02-11 22:58:03,084 | INFO     | . Timing measurements:
[2026-02-11 23:58:50] 2026-02-11 22:58:03,084 | INFO     | . get job = 0 s
[2026-02-11 23:58:50] 2026-02-11 22:58:03,084 | INFO     | . initial setup = 119 s
[2026-02-11 23:58:50] 2026-02-11 22:58:03,084 | INFO     | . payload setup = 161 s
[2026-02-11 23:58:50] 2026-02-11 22:58:03,084 | INFO     | . stage-in = 0 s
[2026-02-11 23:58:50] 2026-02-11 22:58:03,085 | INFO     | . payload execution = 15157 s
[2026-02-11 23:58:50] 2026-02-11 22:58:03,085 | INFO     | . stage-out = 4 s
[2026-02-11 23:58:50] 2026-02-11 22:58:03,085 | INFO     | . log creation = 1 s
[2026-02-11 23:58:50] 2026-02-11 22:58:03,085 | INFO     | ..............................
[2026-02-11 23:58:50] 2026-02-11 22:58:03,193 | INFO     | 
[2026-02-11 23:58:50] 2026-02-11 22:58:03,194 | INFO     | job summary report
[2026-02-11 23:58:50] 2026-02-11 22:58:03,194 | INFO     | --------------------------------------------------
[2026-02-11 23:58:50] 2026-02-11 22:58:03,194 | INFO     | PanDA job id: 6993747140
[2026-02-11 23:58:50] 2026-02-11 22:58:03,194 | INFO     | task id: 48318034
[2026-02-11 23:58:50] 2026-02-11 22:58:03,194 | INFO     | errors: (none)
[2026-02-11 23:58:50] 2026-02-11 22:58:03,194 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-11 23:58:50] 2026-02-11 22:58:03,194 | INFO     | pilot state: finished 
[2026-02-11 23:58:50] 2026-02-11 22:58:03,194 | INFO     | transexitcode: 0
[2026-02-11 23:58:50] 2026-02-11 22:58:03,194 | INFO     | exeerrorcode: 0
[2026-02-11 23:58:50] 2026-02-11 22:58:03,194 | INFO     | exeerrordiag: 
[2026-02-11 23:58:50] 2026-02-11 22:58:03,194 | INFO     | exitcode: 0
[2026-02-11 23:58:50] 2026-02-11 22:58:03,194 | INFO     | exitmsg: OK
[2026-02-11 23:58:50] 2026-02-11 22:58:03,194 | INFO     | cpuconsumptiontime: 56520 s
[2026-02-11 23:58:50] 2026-02-11 22:58:03,195 | INFO     | nevents: 400
[2026-02-11 23:58:50] 2026-02-11 22:58:03,195 | INFO     | neventsw: 0
[2026-02-11 23:58:50] 2026-02-11 22:58:03,195 | INFO     | pid: 24243
[2026-02-11 23:58:50] 2026-02-11 22:58:03,195 | INFO     | pgrp: 24243
[2026-02-11 23:58:50] 2026-02-11 22:58:03,195 | INFO     | corecount: 8
[2026-02-11 23:58:50] 2026-02-11 22:58:03,195 | INFO     | event service: False
[2026-02-11 23:58:50] 2026-02-11 22:58:03,195 | INFO     | sizes: {0: 2281693, 1: 2282150, 2: 2282210, 12: 2282238, 15323: 2313321, 15324: 2313320, 15330: 2322504, 15332: 2322560, 15333: 2322754}
[2026-02-11 23:58:50] 2026-02-11 22:58:03,195 | INFO     | --------------------------------------------------
[2026-02-11 23:58:50] 2026-02-11 22:58:03,195 | INFO     | 
[2026-02-11 23:58:50] 2026-02-11 22:58:03,196 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2026-02-11 23:58:50] 2026-02-11 22:58:03,656 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-11 23:58:50] 2026-02-11 22:58:03,657 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-11 23:58:50] 2026-02-11 22:58:03,657 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-11 23:58:50] 2026-02-11 22:58:03,657 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-11 23:58:50] 2026-02-11 22:58:03,657 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-11 23:58:50] 2026-02-11 22:58:03,657 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-11 23:58:50] 2026-02-11 22:58:03,657 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-11 23:58:50] 2026-02-11 22:58:03,657 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-11 23:58:50] 2026-02-11 22:58:03,658 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-11 23:58:50] 2026-02-11 22:58:03,658 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-11 23:58:50] 2026-02-11 22:58:03,658 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-11 23:58:50] 2026-02-11 22:58:03,658 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-11 23:58:50] 2026-02-11 22:58:03,658 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-11 23:58:50] 2026-02-11 22:58:03,658 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-11 23:58:50] 2026-02-11 22:58:03,658 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-11 23:58:50] 2026-02-11 22:58:03,658 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-11 23:58:50] 2026-02-11 22:58:03,658 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-11 23:58:50] 2026-02-11 22:58:03,659 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-11 23:58:50] 2026-02-11 22:58:03,659 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-11 23:58:50] 2026-02-11 22:58:03,659 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-11 23:58:50] 2026-02-11 22:58:03,659 | INFO     | job 6993747140 has completed (purged errors)
[2026-02-11 23:58:50] 2026-02-11 22:58:03,659 | INFO     | overall cleanup function is called
[2026-02-11 23:58:50] 2026-02-11 22:58:04,668 | INFO     | --- collectZombieJob: --- 10, [24243]
[2026-02-11 23:58:50] 2026-02-11 22:58:04,668 | INFO     | zombie collector waiting for pid 24243
[2026-02-11 23:58:50] 2026-02-11 22:58:04,668 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-11 23:58:50] 2026-02-11 22:58:04,669 | INFO     | collected zombie processes
[2026-02-11 23:58:50] 2026-02-11 22:58:04,669 | INFO     | will attempt to kill all subprocesses of pid=24243
[2026-02-11 23:58:50] 2026-02-11 22:58:04,774 | INFO     | process IDs to be killed: [24243] (in reverse order)
[2026-02-11 23:58:50] 2026-02-11 22:58:05,728 | WARNING  | found no corresponding commands to process id(s)
[2026-02-11 23:58:50] 2026-02-11 22:58:05,729 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-11 23:58:50] 2026-02-11 22:58:05,730 | INFO     | did not find any defunct processes belonging to 24243
[2026-02-11 23:58:50] 2026-02-11 22:58:05,732 | INFO     | did not find any defunct processes belonging to 24243
[2026-02-11 23:58:50] 2026-02-11 22:58:05,732 | INFO     | ready for new job
[2026-02-11 23:58:50] 2026-02-11 22:58:05,732 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-11 23:58:50] 2026-02-11 22:58:05,734 | INFO     | **************************************
[2026-02-11 23:58:50] 2026-02-11 22:58:05,734 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-11 23:58:50] 2026-02-11 22:58:05,734 | INFO     | **************************************
[2026-02-11 23:58:50] 2026-02-11 22:58:05,734 | INFO     | 
[2026-02-11 23:58:50] 2026-02-11 22:58:05,735 | INFO     | pilot is running in a VM
[2026-02-11 23:58:50] 2026-02-11 22:58:05,735 | INFO     | architecture information:
[2026-02-11 23:58:50] 2026-02-11 22:58:05,736 | INFO     | executing command: cat /etc/os-release
[2026-02-11 23:58:50] 2026-02-11 22:58:06,004 | INFO     | cat /etc/os-release:
[2026-02-11 23:58:50] NAME="CentOS Linux"
[2026-02-11 23:58:50] VERSION="7 (Core)"
[2026-02-11 23:58:50] ID="centos"
[2026-02-11 23:58:50] ID_LIKE="rhel fedora"
[2026-02-11 23:58:50] VERSION_ID="7"
[2026-02-11 23:58:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-11 23:58:50] ANSI_COLOR="0;31"
[2026-02-11 23:58:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-11 23:58:50] HOME_URL="https://www.centos.org/"
[2026-02-11 23:58:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-11 23:58:50] 
[2026-02-11 23:58:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-11 23:58:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-11 23:58:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-11 23:58:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-11 23:58:50] 
[2026-02-11 23:58:50] 2026-02-11 22:58:06,005 | INFO     | **************************************
[2026-02-11 23:58:50] 2026-02-11 22:58:06,508 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2026-02-11 23:58:50] 2026-02-11 22:58:06,793 | INFO     | sufficient remaining disk space (496152608768 B)
[2026-02-11 23:58:50] 2026-02-11 22:58:06,794 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-11 23:58:50] 2026-02-11 22:58:06,794 | INFO     | current server update state: UPDATING_FINAL
[2026-02-11 23:58:50] 2026-02-11 22:58:06,794 | INFO     | update_server=False
[2026-02-11 23:58:50] 2026-02-11 22:58:06,794 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-11 23:58:50] 2026-02-11 22:58:06,816 | INFO     | all job control threads have been joined
[2026-02-11 23:58:50] 2026-02-11 22:58:07,558 | INFO     | all data control threads have been joined
[2026-02-11 23:58:50] 2026-02-11 22:58:07,585 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-11 23:58:50] 2026-02-11 22:58:07,628 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-11 23:58:50] 2026-02-11 22:58:07,628 | INFO     | aborting loop
[2026-02-11 23:58:50] 2026-02-11 22:58:07,800 | INFO     | [job] retrieve thread has finished
[2026-02-11 23:58:50] 2026-02-11 22:58:07,822 | INFO     | [job] control thread has finished
[2026-02-11 23:58:50] 2026-02-11 22:58:07,914 | INFO     | [job] create_data_payload thread has finished
[2026-02-11 23:58:50] 2026-02-11 22:58:08,208 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-11 23:58:50] 2026-02-11 22:58:08,256 | INFO     | all payload control threads have been joined
[2026-02-11 23:58:50] 2026-02-11 22:58:08,293 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-11 23:58:50] 2026-02-11 22:58:08,306 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-11 23:58:50] 2026-02-11 22:58:08,564 | INFO     | [data] control thread has finished
[2026-02-11 23:58:50] 2026-02-11 22:58:08,607 | INFO     | [payload] failed_post thread has finished
[2026-02-11 23:58:50] 2026-02-11 22:58:08,634 | INFO     | [job] job monitor thread has finished
[2026-02-11 23:58:50] 2026-02-11 22:58:08,668 | INFO     | [payload] validate_pre thread has finished
[2026-02-11 23:58:50] 2026-02-11 22:58:08,710 | INFO     | [data] copytool_in thread has finished
[2026-02-11 23:58:50] 2026-02-11 22:58:08,880 | INFO     | [job] validate thread has finished
[2026-02-11 23:58:50] 2026-02-11 22:58:09,130 | INFO     | [payload] execute_payloads thread has finished
[2026-02-11 23:58:50] 2026-02-11 22:58:09,214 | INFO     | [job] queue monitor thread has finished
[2026-02-11 23:58:50] 2026-02-11 22:58:09,262 | INFO     | [payload] control thread has finished
[2026-02-11 23:58:50] 2026-02-11 22:58:09,286 | INFO     | [payload] validate_post thread has finished
[2026-02-11 23:58:50] 2026-02-11 22:58:09,592 | INFO     | [data] copytool_out thread has finished
[2026-02-11 23:58:50] 2026-02-11 22:58:12,315 | INFO     | [data] queue_monitor thread has finished
[2026-02-11 23:58:50] 2026-02-11 22:58:34,873 | INFO     | PID=19795 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-11 23:58:50] 2026-02-11 22:58:34,873 | INFO     | .. there are 2 such processes running
[2026-02-11 23:58:50] 2026-02-11 22:58:34,875 | INFO     | found 0 job(s) in 20 queues
[2026-02-11 23:58:50] 2026-02-11 22:58:34,875 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-11 23:58:50] 2026-02-11 22:58:34,875 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-11 23:58:50] 2026-02-11 22:58:43,057 | INFO     | [monitor] cgroup control has ended
[2026-02-11 23:58:50] 2026-02-11 22:58:43,237 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140254090430272)>', '<ExcThread(monitor, started 140253499225856)>']
[2026-02-11 23:58:50] 2026-02-11 22:58:43,929 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-11 23:58:50] 2026-02-11 22:58:43,929 | INFO     | [monitor] control thread has ended
[2026-02-11 23:58:50] 2026-02-11 22:58:48,263 | INFO     | all workflow threads have been joined
[2026-02-11 23:58:50] 2026-02-11 22:58:48,263 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-11 23:58:50] 2026-02-11 22:58:48,264 | INFO     | traces error code: 0
[2026-02-11 23:58:50] 2026-02-11 22:58:48,264 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-11 23:58:50] 2026-02-11 22:58:48,755 [wrapper] ==== pilot stdout END ====
[2026-02-11 23:58:50] 2026-02-11 22:58:48,845 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-11 23:58:50] 2026-02-11 22:58:48,939 [wrapper] pilotpid: 19795
[2026-02-11 23:58:50] 2026-02-11 22:58:49,081 [wrapper] Pilot exit status: 0
[2026-02-11 23:58:50] 2026-02-11 22:58:49,212 [wrapper] pandaids: 6993747140
[2026-02-11 23:58:50] 2026-02-11 22:58:49,397 [wrapper] cleanup supervisor_pilot 30112 19796
[2026-02-11 23:58:50] 2026-02-11 22:58:49,417 [wrapper] Test setup, not cleaning
[2026-02-11 23:58:50] 2026-02-11 22:58:49,539 [wrapper] apfmon messages muted
[2026-02-11 23:58:50] 2026-02-11 22:58:49,662 [wrapper] ==== wrapper stdout END ====
[2026-02-11 23:58:50] 2026-02-11 22:58:49,799 [wrapper] ==== wrapper stderr END ====
[2026-02-11 23:58:50]  *** Error codes and diagnostics ***
[2026-02-11 23:58:50]     "exeErrorCode": 0,
[2026-02-11 23:58:50]     "exeErrorDiag": "",
[2026-02-11 23:58:50]     "pilotErrorCode": 0,
[2026-02-11 23:58:50]     "pilotErrorDiag": "",
[2026-02-11 23:58:50]  *** Listing of results directory ***
[2026-02-11 23:58:50] total 673704
[2026-02-11 23:58:50] -rw-r--r--. 1 boinc boinc    584422 Feb  3 05:59 pilot3.tar.gz
[2026-02-11 23:58:50] -rwx------. 1 boinc boinc     36322 Feb  3 06:01 runpilot2-wrapper.sh
[2026-02-11 23:58:50] -rw-r--r--. 1 boinc boinc      5111 Feb  3 06:02 queuedata.json
[2026-02-11 23:58:50] -rw-r--r--. 1 boinc boinc       100 Feb 11 19:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-11 23:58:50] -rwxr-xr-x. 1 boinc boinc      7986 Feb 11 19:35 run_atlas
[2026-02-11 23:58:50] -rw-r--r--. 1 boinc boinc       105 Feb 11 19:35 job.xml
[2026-02-11 23:58:50] -rw-r--r--. 1 boinc boinc      6392 Feb 11 19:35 init_data.xml
[2026-02-11 23:58:50] -rw-r--r--. 2 boinc boinc 493712179 Feb 11 19:35 EVNT.48318032._000152.pool.root.1
[2026-02-11 23:58:50] -rw-r--r--. 2 boinc boinc     15845 Feb 11 19:35 start_atlas.sh
[2026-02-11 23:58:50] drwxrwx--x. 2 boinc boinc        68 Feb 11 19:35 shared
[2026-02-11 23:58:50] -rw-r--r--. 2 boinc boinc    597770 Feb 11 19:35 input.tar.gz
[2026-02-11 23:58:50] -rw-r--r--. 1 boinc boinc         0 Feb 11 19:35 boinc_lockfile
[2026-02-11 23:58:50] -rw-r--r--. 1 boinc boinc      2536 Feb 11 19:35 pandaJob.out
[2026-02-11 23:58:50] -rw-------. 1 boinc boinc       413 Feb 11 19:42 workernode_map.json
[2026-02-11 23:58:50] -rw-------. 1 boinc boinc   1008152 Feb 11 19:42 agis_schedconf.cvmfs.json
[2026-02-11 23:58:50] drwx------. 5 boinc boinc      4096 Feb 11 19:42 pilot3
[2026-02-11 23:58:50] -rw-------. 1 boinc boinc 186901580 Feb 11 23:56 HITS.48318034._007163.pool.root.1
[2026-02-11 23:58:50] -rw-r--r--. 1 boinc boinc       532 Feb 11 23:56 boinc_task_state.xml
[2026-02-11 23:58:50] -rw-------. 1 boinc boinc      1011 Feb 11 23:57 memory_monitor_summary.json
[2026-02-11 23:58:50] -rw-------. 1 boinc boinc   1512955 Feb 11 23:57 agis_ddmendpoints.agis.ALL.json
[2026-02-11 23:58:50] -rw-------. 1 boinc boinc    502452 Feb 11 23:57 log.48318034._007163.job.log.tgz.1
[2026-02-11 23:58:50] -rw-------. 1 boinc boinc      6313 Feb 11 23:58 heartbeat.json
[2026-02-11 23:58:50] -rw-------. 1 boinc boinc        95 Feb 11 23:58 pilot_heartbeat.json
[2026-02-11 23:58:50] -rw-------. 1 boinc boinc      4881 Feb 11 23:58 pilotlog.txt
[2026-02-11 23:58:50] -rw-------. 1 boinc boinc   2164460 Feb 11 23:58 log.48318034._007163.job.log.1
[2026-02-11 23:58:50] -rw-r--r--. 1 boinc boinc      8192 Feb 11 23:58 boinc_mmap_file
[2026-02-11 23:58:50] -rw-r--r--. 1 boinc boinc        28 Feb 11 23:58 wrapper_checkpoint.txt
[2026-02-11 23:58:50] -rw-------. 1 boinc boinc       357 Feb 11 23:58 output.list
[2026-02-11 23:58:50] -rw-r--r--. 1 boinc boinc       620 Feb 11 23:58 runtime_log
[2026-02-11 23:58:50] -rw-------. 1 boinc boinc   2682880 Feb 11 23:58 result.tar.gz
[2026-02-11 23:58:50] -rw-r--r--. 1 boinc boinc      8832 Feb 11 23:58 runtime_log.err
[2026-02-11 23:58:50] -rw-------. 1 boinc boinc       655 Feb 11 23:58 2kqNDmRiN78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmoIUKDmGNBmAn.diag
[2026-02-11 23:58:50] -rw-r--r--. 1 boinc boinc     20730 Feb 11 23:58 stderr.txt
[2026-02-11 23:58:51] HITS file was successfully produced:
[2026-02-11 23:58:51] -rw-------. 1 boinc boinc 186901580 Feb 11 23:56 shared/HITS.pool.root.1
[2026-02-11 23:58:51]  *** Contents of shared directory: ***
[2026-02-11 23:58:51] total 667888
[2026-02-11 23:58:51] -rw-r--r--. 2 boinc boinc 493712179 Feb 11 19:35 ATLAS.root_0
[2026-02-11 23:58:51] -rw-r--r--. 2 boinc boinc     15845 Feb 11 19:35 start_atlas.sh
[2026-02-11 23:58:51] -rw-r--r--. 2 boinc boinc    597770 Feb 11 19:35 input.tar.gz
[2026-02-11 23:58:51] -rw-------. 1 boinc boinc 186901580 Feb 11 23:56 HITS.pool.root.1
[2026-02-11 23:58:51] -rw-------. 1 boinc boinc   2682880 Feb 11 23:58 result.tar.gz
23:58:52 (15832): run_atlas exited; CPU time 56671.429163
23:58:52 (15832): called boinc_finish(0)

</stderr_txt>
]]>

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