Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:31:55 (861701): wrapper (7.7.26015): starting
01:31:55 (861701): wrapper: running run_atlas (--nthreads 3)
[2026-02-12 01:31:55] Arguments: --nthreads 3
[2026-02-12 01:31:55] Threads: 3
[2026-02-12 01:31:55] Checking for CVMFS
[2026-02-12 01:31:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 01:31:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 01:31:57] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 01:31:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 01:31:57] 2.9.2.0 3857847 8217 85656 156134 0 50 25877176 36864000 0 130560 0 3414125 99.984 283067 5884 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-12 01:31:57] CVMFS is ok
[2026-02-12 01:31:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-12 01:31:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-12 01:31:57] Further information can be found at the LHC@home message board.
[2026-02-12 01:31:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 01:31:57] Checking for apptainer binary...
[2026-02-12 01:31:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 01:31:57] Running /usr/bin/apptainer --version
[2026-02-12 01:31:57] apptainer version 1.4.1-1.1
[2026-02-12 01:31:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 01:31:57] thA337a
[2026-02-12 01:31:57] apptainer works
[2026-02-12 01:31:57] Set ATHENA_PROC_NUMBER=3
[2026-02-12 01:31:57] Set ATHENA_CORE_NUMBER=3
[2026-02-12 01:31:57] Starting ATLAS job with PandaID=6993748544
[2026-02-12 01:31:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 03:03:19]  *** The last 200 lines of the pilot log: ***
[2026-02-12 03:03:19] 2026-02-12 02:02:29,674 | INFO     | executing command: cat /etc/os-release
[2026-02-12 03:03:19] 2026-02-12 02:02:29,682 | INFO     | cat /etc/os-release:
[2026-02-12 03:03:19] NAME="CentOS Linux"
[2026-02-12 03:03:19] VERSION="7 (Core)"
[2026-02-12 03:03:19] ID="centos"
[2026-02-12 03:03:19] ID_LIKE="rhel fedora"
[2026-02-12 03:03:19] VERSION_ID="7"
[2026-02-12 03:03:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 03:03:19] ANSI_COLOR="0;31"
[2026-02-12 03:03:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 03:03:19] HOME_URL="https://www.centos.org/"
[2026-02-12 03:03:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 03:03:19] 
[2026-02-12 03:03:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 03:03:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 03:03:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 03:03:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 03:03:19] 
[2026-02-12 03:03:19] 2026-02-12 02:02:29,683 | INFO     | **************************************
[2026-02-12 03:03:19] 2026-02-12 02:02:30,186 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-12 03:03:19] 2026-02-12 02:02:30,198 | INFO     | sufficient remaining disk space (375713169408 B)
[2026-02-12 03:03:19] 2026-02-12 02:02:30,198 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 03:03:19] 2026-02-12 02:02:30,198 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 03:03:19] 2026-02-12 02:02:30,198 | INFO     | update_server=False
[2026-02-12 03:03:19] 2026-02-12 02:02:30,199 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 03:03:19] 2026-02-12 02:02:30,199 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 03:03:19] 2026-02-12 02:02:30,199 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 03:03:19] 2026-02-12 02:02:30,234 | INFO     | all data control threads have been joined
[2026-02-12 03:03:19] 2026-02-12 02:02:30,738 | INFO     | all job control threads have been joined
[2026-02-12 03:03:19] 2026-02-12 02:02:31,044 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 03:03:19] 2026-02-12 02:02:31,044 | INFO     | aborting loop
[2026-02-12 03:03:19] 2026-02-12 02:02:31,204 | INFO     | [job] retrieve thread has finished
[2026-02-12 03:03:19] 2026-02-12 02:02:31,204 | INFO     | [job] queue monitor thread has finished
[2026-02-12 03:03:19] 2026-02-12 02:02:31,226 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 03:03:19] 2026-02-12 02:02:31,240 | INFO     | [data] control thread has finished
[2026-02-12 03:03:19] 2026-02-12 02:02:31,276 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 03:03:19] 2026-02-12 02:02:31,386 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 03:03:19] 2026-02-12 02:02:31,440 | INFO     | [data] copytool_in thread has finished
[2026-02-12 03:03:19] 2026-02-12 02:02:31,509 | INFO     | all payload control threads have been joined
[2026-02-12 03:03:19] 2026-02-12 02:02:31,713 | INFO     | [payload] validate_post thread has finished
[2026-02-12 03:03:19] 2026-02-12 02:02:31,744 | INFO     | [job] control thread has finished
[2026-02-12 03:03:19] 2026-02-12 02:02:31,940 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 03:03:19] 2026-02-12 02:02:32,049 | INFO     | [job] job monitor thread has finished
[2026-02-12 03:03:19] 2026-02-12 02:02:32,205 | INFO     | [data] copytool_out thread has finished
[2026-02-12 03:03:19] 2026-02-12 02:02:32,495 | INFO     | [payload] failed_post thread has finished
[2026-02-12 03:03:19] 2026-02-12 02:02:32,515 | INFO     | [payload] control thread has finished
[2026-02-12 03:03:19] 2026-02-12 02:02:32,594 | INFO     | [job] validate thread has finished
[2026-02-12 03:03:19] 2026-02-12 02:02:32,767 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 03:03:19] 2026-02-12 02:02:36,774 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 03:03:19] 2026-02-12 02:03:01,061 | INFO     | PID=865740 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-12 03:03:19] 2026-02-12 02:03:01,061 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 03:03:19] 2026-02-12 02:03:01,061 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 03:03:19] 2026-02-12 02:03:01,061 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 03:03:19] 2026-02-12 02:03:12,653 | INFO     | [monitor] cgroup control has ended
[2026-02-12 03:03:19] 2026-02-12 02:03:14,525 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140220462475072)>', '<ExcThread(monitor, started 140220104156928)>']
[2026-02-12 03:03:19] 2026-02-12 02:03:15,133 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 03:03:19] 2026-02-12 02:03:15,133 | INFO     | [monitor] control thread has ended
[2026-02-12 03:03:19] 2026-02-12 02:03:19,550 | INFO     | all workflow threads have been joined
[2026-02-12 03:03:19] 2026-02-12 02:03:19,550 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 03:03:19] 2026-02-12 02:03:19,551 | INFO     | traces error code: 0
[2026-02-12 03:03:19] 2026-02-12 02:03:19,551 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 03:03:19] 2026-02-12 02:03:19,600 [wrapper] ==== pilot stdout END ====
[2026-02-12 03:03:19] 2026-02-12 02:03:19,603 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 03:03:19] 2026-02-12 02:03:19,605 [wrapper] pilotpid: 865740
[2026-02-12 03:03:19] 2026-02-12 02:03:19,607 [wrapper] Pilot exit status: 0
[2026-02-12 03:03:19] 2026-02-12 02:03:19,614 [wrapper] pandaids: 6993748544
[2026-02-12 03:03:19] 2026-02-12 02:03:19,631 [wrapper] cleanup supervisor_pilot  876286 865741
[2026-02-12 03:03:19] 2026-02-12 02:03:19,633 [wrapper] Test setup, not cleaning
[2026-02-12 03:03:19] 2026-02-12 02:03:19,635 [wrapper] apfmon messages muted
[2026-02-12 03:03:19] 2026-02-12 02:03:19,637 [wrapper] ==== wrapper stdout END ====
[2026-02-12 03:03:19] 2026-02-12 02:03:19,639 [wrapper] ==== wrapper stderr END ====
[2026-02-12 03:03:19]  *** Error codes and diagnostics ***
[2026-02-12 03:03:19]     "exeErrorCode": 0,
[2026-02-12 03:03:19]     "exeErrorDiag": "",
[2026-02-12 03:03:19]     "pilotErrorCode": 0,
[2026-02-12 03:03:19]     "pilotErrorDiag": "",
[2026-02-12 03:03:19]  *** Listing of results directory ***
[2026-02-12 03:03:19] total 419924
[2026-02-12 03:03:19] -rwx------ 1 boinc boinc     36322 Feb  3 05:58 runpilot2-wrapper.sh
[2026-02-12 03:03:19] -rw-r--r-- 1 boinc boinc    584422 Feb  3 05:59 pilot3.tar.gz
[2026-02-12 03:03:19] -rw-r--r-- 1 boinc boinc      5111 Feb  3 06:00 queuedata.json
[2026-02-12 03:03:19] -rw-r--r-- 1 boinc boinc       100 Feb 12 01:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 03:03:19] -rwxr-xr-x 1 boinc boinc      7986 Feb 12 01:31 run_atlas
[2026-02-12 03:03:19] -rw-r--r-- 1 boinc boinc       105 Feb 12 01:31 job.xml
[2026-02-12 03:03:19] -rw-r--r-- 2 boinc boinc 251644942 Feb 12 01:31 EVNT.48330150._000004.pool.root.1
[2026-02-12 03:03:19] -rw-r--r-- 2 boinc boinc    597764 Feb 12 01:31 input.tar.gz
[2026-02-12 03:03:19] -rw-r--r-- 2 boinc boinc     15845 Feb 12 01:31 start_atlas.sh
[2026-02-12 03:03:19] drwxrwx--x 2 boinc boinc      4096 Feb 12 01:31 shared
[2026-02-12 03:03:19] -rw-r--r-- 1 boinc boinc         0 Feb 12 01:31 boinc_setup_complete
[2026-02-12 03:03:19] -rw-r--r-- 1 boinc boinc      6446 Feb 12 01:31 init_data.xml
[2026-02-12 03:03:19] -rw-r--r-- 1 boinc boinc         0 Feb 12 01:31 boinc_lockfile
[2026-02-12 03:03:19] -rw-r--r-- 1 boinc boinc      2611 Feb 12 01:31 pandaJob.out
[2026-02-12 03:03:19] -rw------- 1 boinc boinc   1005057 Feb 12 01:32 agis_schedconf.cvmfs.json
[2026-02-12 03:03:19] -rw------- 1 boinc boinc   1512955 Feb 12 01:32 agis_ddmendpoints.agis.ALL.json
[2026-02-12 03:03:19] -rw------- 1 boinc boinc       423 Feb 12 01:32 workernode_map.json
[2026-02-12 03:03:19] drwx------ 5 boinc boinc      4096 Feb 12 01:32 pilot3
[2026-02-12 03:03:19] -rw------- 1 boinc boinc 172315547 Feb 12 03:02 HITS.48330152._000092.pool.root.1
[2026-02-12 03:03:19] -rw-r--r-- 1 boinc boinc       529 Feb 12 03:02 boinc_task_state.xml
[2026-02-12 03:03:19] -rw------- 1 boinc boinc      1015 Feb 12 03:02 memory_monitor_summary.json
[2026-02-12 03:03:19] -rw------- 1 boinc boinc    266490 Feb 12 03:02 log.48330152._000092.job.log.tgz.1
[2026-02-12 03:03:19] -rw------- 1 boinc boinc      6293 Feb 12 03:02 heartbeat.json
[2026-02-12 03:03:19] -rw-r--r-- 1 boinc boinc      8192 Feb 12 03:02 boinc_mmap_file
[2026-02-12 03:03:19] -rw-r--r-- 1 boinc boinc        27 Feb 12 03:02 wrapper_checkpoint.txt
[2026-02-12 03:03:19] -rw------- 1 boinc boinc        95 Feb 12 03:03 pilot_heartbeat.json
[2026-02-12 03:03:19] -rw------- 1 boinc boinc      4747 Feb 12 03:03 pilotlog.txt
[2026-02-12 03:03:19] -rw------- 1 boinc boinc    787672 Feb 12 03:03 log.48330152._000092.job.log.1
[2026-02-12 03:03:19] -rw------- 1 boinc boinc       357 Feb 12 03:03 output.list
[2026-02-12 03:03:19] -rw-r--r-- 1 boinc boinc       620 Feb 12 03:03 runtime_log
[2026-02-12 03:03:19] -rw------- 1 boinc boinc   1075200 Feb 12 03:03 result.tar.gz
[2026-02-12 03:03:19] -rw-r--r-- 1 boinc boinc      8901 Feb 12 03:03 runtime_log.err
[2026-02-12 03:03:19] -rw------- 1 boinc boinc       658 Feb 12 03:03 YtHLDm7fN78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm1HUKDmfxXYVn.diag
[2026-02-12 03:03:19] -rw-r--r-- 1 boinc boinc      8881 Feb 12 03:03 stderr.txt
[2026-02-12 03:03:19] HITS file was successfully produced:
[2026-02-12 03:03:19] -rw------- 1 boinc boinc 172315547 Feb 12 03:02 shared/HITS.pool.root.1
[2026-02-12 03:03:19]  *** Contents of shared directory: ***
[2026-02-12 03:03:19] total 415688
[2026-02-12 03:03:19] -rw-r--r-- 2 boinc boinc 251644942 Feb 12 01:31 ATLAS.root_0
[2026-02-12 03:03:19] -rw-r--r-- 2 boinc boinc    597764 Feb 12 01:31 input.tar.gz
[2026-02-12 03:03:19] -rw-r--r-- 2 boinc boinc     15845 Feb 12 01:31 start_atlas.sh
[2026-02-12 03:03:19] -rw------- 1 boinc boinc 172315547 Feb 12 03:02 HITS.pool.root.1
[2026-02-12 03:03:19] -rw------- 1 boinc boinc   1075200 Feb 12 03:03 result.tar.gz
03:03:21 (861701): run_atlas exited; CPU time 15518.823671
03:03:21 (861701): called boinc_finish(0)

</stderr_txt>
]]>

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