Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:56:50 (3834034): wrapper (7.7.26015): starting
15:56:50 (3834034): wrapper: running run_atlas (--nthreads 12)
[2026-02-11 15:56:50] Arguments: --nthreads 12
[2026-02-11 15:56:50] Threads: 12
[2026-02-11 15:56:50] Checking for CVMFS
[2026-02-11 15:56:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 15:56:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 15:56:50] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 15:56:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 15:56:50] 2.13.3.0 4372 7607 97244 156118 1 52 29633016 46080001 922 130560 0 12389142 99.995 261677 519 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-02-11 15:56:50] CVMFS is ok
[2026-02-11 15:56:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-11 15:56:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-11 15:56:50] Further information can be found at the LHC@home message board.
[2026-02-11 15:56:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 15:56:50] Checking for apptainer binary...
[2026-02-11 15:56:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-11 15:56:50] Running /usr/bin/apptainer --version
[2026-02-11 15:56:50] apptainer version 1.4.5-2.el9
[2026-02-11 15:56:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 15:56:50] gpu01.farm.particle.cz
[2026-02-11 15:56:50] apptainer works
[2026-02-11 15:56:50] Set ATHENA_PROC_NUMBER=12
[2026-02-11 15:56:50] Set ATHENA_CORE_NUMBER=12
[2026-02-11 15:56:50] Starting ATLAS job with PandaID=6998615362
[2026-02-11 15:56:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-11 17:00:12]  *** The last 200 lines of the pilot log: ***
[2026-02-11 17:00:12]  is_tar=False
[2026-02-11 17:00:12]  lfn=log.48431096._003256.job.log.tgz.1
[2026-02-11 17:00:12]  mtime=0
[2026-02-11 17:00:12]  protocol_id=None
[2026-02-11 17:00:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-11 17:00:12]  replicas=None
[2026-02-11 17:00:12]  scope=mc23_13p6TeV
[2026-02-11 17:00:12]  status=None
[2026-02-11 17:00:12]  status_code=0
[2026-02-11 17:00:12]  storage_token=
[2026-02-11 17:00:12]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6998615362/log.48431096._003256.job.log.tgz.1
[2026-02-11 17:00:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/af/log.48431096._003256.job.log.tgz.1
[2026-02-11 17:00:12]  workdir=None
[2026-02-11 17:00:12] ]
[2026-02-11 17:00:12] 2026-02-11 15:59:05,361 | INFO     | transferring file log.48431096._003256.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6998615362/log.48431096._003256.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-02-11 17:00:12] 2026-02-11 15:59:05,361 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6998615362/log.48431096._003256.job.log.tgz.1 /var/lib/boinc/slots/0/log.48431096._003256.job
[2026-02-11 17:00:12] 2026-02-11 15:59:05,376 | INFO     | adding to output.list: log.48431096._003256.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/af/log.48431096._003256.job.log.tg
[2026-02-11 17:00:12] 2026-02-11 15:59:05,376 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-11 17:00:12] 2026-02-11 15:59:05,376 | INFO     | summary of transferred files:
[2026-02-11 17:00:12] 2026-02-11 15:59:05,376 | INFO     |  -- lfn=log.48431096._003256.job.log.tgz.1, status_code=0, status=transferred
[2026-02-11 17:00:12] 2026-02-11 15:59:05,376 | INFO     | stage-out finished correctly
[2026-02-11 17:00:12] 2026-02-11 15:59:06,699 | INFO     | time since job start (3725s) is within the limit (349056.0s)
[2026-02-11 17:00:12] 2026-02-11 15:59:06,716 | INFO     | monitor loop #285: job 0:6998615362 is in state 'finished'
[2026-02-11 17:00:12] 2026-02-11 15:59:06,717 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-11 17:00:12] 2026-02-11 15:59:08,272 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-11 17:00:12] 2026-02-11 15:59:08,705 | INFO     | time since job start (3727s) is within the limit (349056.0s)
[2026-02-11 17:00:12] 2026-02-11 15:59:09,218 | INFO     | monitor loop #286: job 0:6998615362 is in state 'finished'
[2026-02-11 17:00:12] 2026-02-11 15:59:09,218 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-11 17:00:12] 2026-02-11 15:59:09,609 | INFO     | job 6998615362 has state=finished
[2026-02-11 17:00:12] 2026-02-11 15:59:09,609 | INFO     | preparing for final server update for job 6998615362 in state='finished'
[2026-02-11 17:00:12] 2026-02-11 15:59:09,610 | INFO     | reading metadata from: /var/lib/boinc/slots/0/PanDA_Pilot-6998615362/jobReport.json
[2026-02-11 17:00:12] 2026-02-11 15:59:09,611 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/0/workernode_map.json
[2026-02-11 17:00:12] 2026-02-11 15:59:09,612 | INFO     | this job has now completed (state=finished)
[2026-02-11 17:00:12] 2026-02-11 15:59:09,612 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-11 17:00:12] 2026-02-11 15:59:09,612 | INFO     | log transfer has been attempted: DONE
[2026-02-11 17:00:12] 2026-02-11 15:59:09,612 | INFO     | job 6998615362 has finished - writing final server update
[2026-02-11 17:00:12] 2026-02-11 15:59:09,612 | INFO     | total number of processed events: 400 (read)
[2026-02-11 17:00:12] 2026-02-11 15:59:09,617 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6998615362/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 17:00:12] 2026-02-11 15:59:09,617 | INFO     | extracted standard info from prmon json
[2026-02-11 17:00:12] 2026-02-11 15:59:09,617 | INFO     | extracted standard memory fields from prmon json
[2026-02-11 17:00:12] 2026-02-11 15:59:09,617 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-11 17:00:12] 2026-02-11 15:59:09,618 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-11 17:00:12] 2026-02-11 15:59:09,618 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-11 17:00:12] 2026-02-11 15:59:09,619 | INFO     | fitting pss+swap vs Time
[2026-02-11 17:00:12] 2026-02-11 15:59:09,619 | INFO     | sum of square deviations: 48810217.5
[2026-02-11 17:00:12] 2026-02-11 15:59:09,619 | INFO     | sum of deviations: -1417172618.0
[2026-02-11 17:00:12] 2026-02-11 15:59:09,619 | INFO     | mean x: 1770823761.5
[2026-02-11 17:00:12] 2026-02-11 15:59:09,619 | INFO     | mean y: 2813455.0
[2026-02-11 17:00:12] 2026-02-11 15:59:09,619 | INFO     | intersect: 51417518708.08687
[2026-02-11 17:00:12] 2026-02-11 15:59:09,619 | INFO     | chi2: 0.038401865587047945
[2026-02-11 17:00:12] 2026-02-11 15:59:09,619 | INFO     | current memory leak: -29.03 B/s (using 54 data points, chi2=0.04)
[2026-02-11 17:00:12] 2026-02-11 15:59:09,620 | INFO     | could have reported an average CPU frequency of 3246 MHz (6 samples)
[2026-02-11 17:00:12] 2026-02-11 15:59:09,620 | INFO     | ..............................
[2026-02-11 17:00:12] 2026-02-11 15:59:09,620 | INFO     | . Timing measurements:
[2026-02-11 17:00:12] 2026-02-11 15:59:09,620 | INFO     | . get job = 0 s
[2026-02-11 17:00:12] 2026-02-11 15:59:09,620 | INFO     | . initial setup = 4 s
[2026-02-11 17:00:12] 2026-02-11 15:59:09,620 | INFO     | . payload setup = 3 s
[2026-02-11 17:00:12] 2026-02-11 15:59:09,620 | INFO     | . stage-in = 0 s
[2026-02-11 17:00:12] 2026-02-11 15:59:09,620 | INFO     | . payload execution = 3704 s
[2026-02-11 17:00:12] 2026-02-11 15:59:09,620 | INFO     | . stage-out = 0 s
[2026-02-11 17:00:12] 2026-02-11 15:59:09,620 | INFO     | . log creation = 0 s
[2026-02-11 17:00:12] 2026-02-11 15:59:09,620 | INFO     | ..............................
[2026-02-11 17:00:12] 2026-02-11 15:59:09,825 | INFO     | 
[2026-02-11 17:00:12] 2026-02-11 15:59:09,826 | INFO     | job summary report
[2026-02-11 17:00:12] 2026-02-11 15:59:09,826 | INFO     | --------------------------------------------------
[2026-02-11 17:00:12] 2026-02-11 15:59:09,826 | INFO     | PanDA job id: 6998615362
[2026-02-11 17:00:12] 2026-02-11 15:59:09,826 | INFO     | task id: 48431096
[2026-02-11 17:00:12] 2026-02-11 15:59:09,826 | INFO     | errors: (none)
[2026-02-11 17:00:12] 2026-02-11 15:59:09,826 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-11 17:00:12] 2026-02-11 15:59:09,826 | INFO     | pilot state: finished 
[2026-02-11 17:00:12] 2026-02-11 15:59:09,826 | INFO     | transexitcode: 0
[2026-02-11 17:00:12] 2026-02-11 15:59:09,826 | INFO     | exeerrorcode: 0
[2026-02-11 17:00:12] 2026-02-11 15:59:09,826 | INFO     | exeerrordiag: 
[2026-02-11 17:00:12] 2026-02-11 15:59:09,826 | INFO     | exitcode: 0
[2026-02-11 17:00:12] 2026-02-11 15:59:09,826 | INFO     | exitmsg: OK
[2026-02-11 17:00:12] 2026-02-11 15:59:09,826 | INFO     | cpuconsumptiontime: 40422 s
[2026-02-11 17:00:12] 2026-02-11 15:59:09,826 | INFO     | nevents: 400
[2026-02-11 17:00:12] 2026-02-11 15:59:09,827 | INFO     | neventsw: 0
[2026-02-11 17:00:12] 2026-02-11 15:59:09,827 | INFO     | pid: 3842492
[2026-02-11 17:00:12] 2026-02-11 15:59:09,827 | INFO     | pgrp: 3842492
[2026-02-11 17:00:12] 2026-02-11 15:59:09,827 | INFO     | corecount: 12
[2026-02-11 17:00:12] 2026-02-11 15:59:09,827 | INFO     | event service: False
[2026-02-11 17:00:12] 2026-02-11 15:59:09,827 | INFO     | sizes: {0: 2282211, 11: 2282211, 3712: 2317078, 3715: 2317078, 3717: 2317272}
[2026-02-11 17:00:12] 2026-02-11 15:59:09,827 | INFO     | --------------------------------------------------
[2026-02-11 17:00:12] 2026-02-11 15:59:09,827 | INFO     | 
[2026-02-11 17:00:12] 2026-02-11 15:59:09,827 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-02-11 17:00:12] 2026-02-11 15:59:09,841 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-11 17:00:12] 2026-02-11 15:59:09,842 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-11 17:00:12] 2026-02-11 15:59:09,842 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-11 17:00:12] 2026-02-11 15:59:09,842 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-11 17:00:12] 2026-02-11 15:59:09,842 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-11 17:00:12] 2026-02-11 15:59:09,842 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-11 17:00:12] 2026-02-11 15:59:09,842 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-11 17:00:12] 2026-02-11 15:59:09,842 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-11 17:00:12] 2026-02-11 15:59:09,842 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-11 17:00:12] 2026-02-11 15:59:09,842 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-11 17:00:12] 2026-02-11 15:59:09,842 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-11 17:00:12] 2026-02-11 15:59:09,842 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-11 17:00:12] 2026-02-11 15:59:09,843 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-11 17:00:12] 2026-02-11 15:59:09,843 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-11 17:00:12] 2026-02-11 15:59:09,843 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-11 17:00:12] 2026-02-11 15:59:09,843 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-11 17:00:12] 2026-02-11 15:59:09,843 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-11 17:00:12] 2026-02-11 15:59:09,843 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-11 17:00:12] 2026-02-11 15:59:09,843 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-11 17:00:12] 2026-02-11 15:59:09,843 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-11 17:00:12] 2026-02-11 15:59:09,843 | INFO     | job 6998615362 has completed (purged errors)
[2026-02-11 17:00:12] 2026-02-11 15:59:09,843 | INFO     | overall cleanup function is called
[2026-02-11 17:00:12] 2026-02-11 15:59:10,852 | INFO     | --- collectZombieJob: --- 10, [3842492]
[2026-02-11 17:00:12] 2026-02-11 15:59:10,852 | INFO     | zombie collector waiting for pid 3842492
[2026-02-11 17:00:12] 2026-02-11 15:59:10,852 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-11 17:00:12] 2026-02-11 15:59:10,852 | INFO     | collected zombie processes
[2026-02-11 17:00:12] 2026-02-11 15:59:10,852 | INFO     | will attempt to kill all subprocesses of pid=3842492
[2026-02-11 17:00:12] 2026-02-11 15:59:10,948 | INFO     | process IDs to be killed: [3842492] (in reverse order)
[2026-02-11 17:00:12] 2026-02-11 15:59:10,989 | WARNING  | found no corresponding commands to process id(s)
[2026-02-11 17:00:12] 2026-02-11 15:59:10,990 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-11 17:00:12] 2026-02-11 15:59:10,993 | INFO     | did not find any defunct processes belonging to 3842492
[2026-02-11 17:00:12] 2026-02-11 15:59:10,996 | INFO     | did not find any defunct processes belonging to 3842492
[2026-02-11 17:00:12] 2026-02-11 15:59:10,996 | INFO     | ready for new job
[2026-02-11 17:00:12] 2026-02-11 15:59:10,996 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-11 17:00:12] 2026-02-11 15:59:10,997 | INFO     | **************************************
[2026-02-11 17:00:12] 2026-02-11 15:59:10,997 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-11 17:00:12] 2026-02-11 15:59:10,997 | INFO     | **************************************
[2026-02-11 17:00:12] 2026-02-11 15:59:10,997 | INFO     | 
[2026-02-11 17:00:12] 2026-02-11 15:59:10,998 | INFO     | architecture information:
[2026-02-11 17:00:12] 2026-02-11 15:59:10,998 | INFO     | executing command: cat /etc/os-release
[2026-02-11 17:00:12] 2026-02-11 15:59:11,010 | INFO     | cat /etc/os-release:
[2026-02-11 17:00:12] NAME="CentOS Linux"
[2026-02-11 17:00:12] VERSION="7 (Core)"
[2026-02-11 17:00:12] ID="centos"
[2026-02-11 17:00:12] ID_LIKE="rhel fedora"
[2026-02-11 17:00:12] VERSION_ID="7"
[2026-02-11 17:00:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-11 17:00:12] ANSI_COLOR="0;31"
[2026-02-11 17:00:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-11 17:00:12] HOME_URL="https://www.centos.org/"
[2026-02-11 17:00:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-11 17:00:12] 
[2026-02-11 17:00:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-11 17:00:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-11 17:00:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-11 17:00:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-11 17:00:12] 
[2026-02-11 17:00:12] 2026-02-11 15:59:11,010 | INFO     | **************************************
[2026-02-11 17:00:12] 2026-02-11 15:59:11,513 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-02-11 17:00:12] 2026-02-11 15:59:11,525 | INFO     | sufficient remaining disk space (41916825600 B)
[2026-02-11 17:00:12] 2026-02-11 15:59:11,525 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-11 17:00:12] 2026-02-11 15:59:11,525 | INFO     | current server update state: UPDATING_FINAL
[2026-02-11 17:00:12] 2026-02-11 15:59:11,525 | INFO     | update_server=False
[2026-02-11 17:00:12] 2026-02-11 15:59:11,525 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-11 17:00:12] 2026-02-11 15:59:11,526 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-11 17:00:12] 2026-02-11 15:59:11,526 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-11 17:00:12] 2026-02-11 15:59:11,721 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-11 17:00:12] 2026-02-11 15:59:11,721 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-11 17:00:12] 2026-02-11 15:59:11,722 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-11 17:00:12] 2026-02-11 15:59:11,722 | INFO     | will abort loop
[2026-02-11 17:00:12] 2026-02-11 15:59:11,781 | INFO     | all data control threads have been joined
[2026-02-11 17:00:12] 2026-02-11 15:59:11,879 | INFO     | all payload control threads have been joined
[2026-02-11 17:00:12] 2026-02-11 15:59:12,531 | INFO     | [job] retrieve thread has finished
[2026-02-11 17:00:12] 2026-02-11 15:59:12,531 | INFO     | [job] queue monitor thread has finished
[2026-02-11 17:00:12] 2026-02-11 15:59:12,700 | INFO     | [payload] validate_pre thread has finished
[2026-02-11 17:00:12] 2026-02-11 15:59:12,727 | INFO     | [job] job monitor thread has finished
[2026-02-11 17:00:12] 2026-02-11 15:59:12,787 | INFO     | [data] control thread has finished
[2026-02-11 17:00:12] 2026-02-11 15:59:12,884 | INFO     | [payload] control thread has finished
[2026-02-11 17:00:12] 2026-02-11 15:59:12,928 | INFO     | [data] copytool_in thread has finished
[2026-02-11 17:00:12] 2026-02-11 15:59:13,033 | INFO     | [payload] execute_payloads thread has finished
[2026-02-11 17:00:12] 2026-02-11 15:59:13,135 | INFO     | all job control threads have been joined
[2026-02-11 17:00:12] 2026-02-11 15:59:13,290 | INFO     | [payload] failed_post thread has finished
[2026-02-11 17:00:12] 2026-02-11 15:59:13,531 | INFO     | [data] copytool_out thread has finished
[2026-02-11 17:00:12] 2026-02-11 15:59:13,883 | INFO     | [job] validate thread has finished
[2026-02-11 17:00:12] 2026-02-11 15:59:13,907 | INFO     | [payload] validate_post thread has finished
[2026-02-11 17:00:12] 2026-02-11 15:59:14,032 | INFO     | [job] create_data_payload thread has finished
[2026-02-11 17:00:12] 2026-02-11 15:59:14,140 | INFO     | [job] control thread has finished
[2026-02-11 17:00:12] 2026-02-11 15:59:14,351 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-11 17:00:12] 2026-02-11 15:59:18,357 | INFO     | [data] queue_monitor thread has finished
[2026-02-11 17:00:12] 2026-02-11 15:59:22,494 | INFO     | job.realtimelogging is not enabled
[2026-02-11 17:00:12] 2026-02-11 15:59:23,499 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-11 17:00:12] 2026-02-11 15:59:41,920 | INFO     | PID=3837898 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-11 17:00:12] 2026-02-11 15:59:41,920 | INFO     | .. there are 2 such processes running
[2026-02-11 17:00:12] 2026-02-11 15:59:41,921 | INFO     | found 0 job(s) in 20 queues
[2026-02-11 17:00:12] 2026-02-11 15:59:41,921 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-11 17:00:12] 2026-02-11 15:59:41,921 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-11 17:00:12] 2026-02-11 16:00:07,125 | INFO     | [monitor] cgroup control has ended
[2026-02-11 17:00:12] 2026-02-11 16:00:07,193 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139693028259648)>', '<ExcThread(monitor, started 139692653664000)>']
[2026-02-11 17:00:12] 2026-02-11 16:00:08,051 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-11 17:00:12] 2026-02-11 16:00:08,051 | INFO     | [monitor] control thread has ended
[2026-02-11 17:00:12] 2026-02-11 16:00:12,218 | INFO     | all workflow threads have been joined
[2026-02-11 17:00:12] 2026-02-11 16:00:12,218 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-11 17:00:12] 2026-02-11 16:00:12,219 | INFO     | traces error code: 0
[2026-02-11 17:00:12] 2026-02-11 16:00:12,219 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-11 17:00:12] 2026-02-11 16:00:12,297 [wrapper] ==== pilot stdout END ====
[2026-02-11 17:00:12] 2026-02-11 16:00:12,300 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-11 17:00:12] 2026-02-11 16:00:12,302 [wrapper] pilotpid: 3837898
[2026-02-11 17:00:12] 2026-02-11 16:00:12,303 [wrapper] Pilot exit status: 0
[2026-02-11 17:00:12] 2026-02-11 16:00:12,311 [wrapper] pandaids: 6998615362
[2026-02-11 17:00:12] 2026-02-11 16:00:12,339 [wrapper] cleanup supervisor_pilot 3892739 3837899
[2026-02-11 17:00:12] 2026-02-11 16:00:12,341 [wrapper] Test setup, not cleaning
[2026-02-11 17:00:12] 2026-02-11 16:00:12,343 [wrapper] apfmon messages muted
[2026-02-11 17:00:12] 2026-02-11 16:00:12,345 [wrapper] ==== wrapper stdout END ====
[2026-02-11 17:00:12] 2026-02-11 16:00:12,347 [wrapper] ==== wrapper stderr END ====
[2026-02-11 17:00:12]  *** Error codes and diagnostics ***
[2026-02-11 17:00:12]     "exeErrorCode": 0,
[2026-02-11 17:00:12]     "exeErrorDiag": "",
[2026-02-11 17:00:12]     "pilotErrorCode": 0,
[2026-02-11 17:00:12]     "pilotErrorDiag": "",
[2026-02-11 17:00:12]  *** Listing of results directory ***
[2026-02-11 17:00:12] total 936860
[2026-02-11 17:00:12] -rw-r--r-- 1 boinc boinc    584422 Feb  3 06:37 pilot3.tar.gz
[2026-02-11 17:00:12] -rwx------ 1 boinc boinc     36322 Feb  3 06:38 runpilot2-wrapper.sh
[2026-02-11 17:00:12] -rw-r--r-- 1 boinc boinc      5111 Feb  3 06:38 queuedata.json
[2026-02-11 17:00:12] -rw-r--r-- 1 boinc boinc       100 Feb 11 15:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-11 17:00:12] -rwxr-xr-x 1 boinc boinc      7986 Feb 11 15:56 run_atlas
[2026-02-11 17:00:12] -rw-r--r-- 1 boinc boinc       105 Feb 11 15:56 job.xml
[2026-02-11 17:00:12] -rw-r--r-- 2 boinc boinc 671774839 Feb 11 15:56 EVNT.48431094._000093.pool.root.1
[2026-02-11 17:00:12] -rw-r--r-- 2 boinc boinc     15845 Feb 11 15:56 start_atlas.sh
[2026-02-11 17:00:12] drwxrwx--x 2 boinc boinc      4096 Feb 11 15:56 shared
[2026-02-11 17:00:12] -rw-r--r-- 2 boinc boinc    597770 Feb 11 15:56 input.tar.gz
[2026-02-11 17:00:12] -rw-r--r-- 1 boinc boinc      9457 Feb 11 15:56 init_data.xml
[2026-02-11 17:00:12] -rw-r--r-- 1 boinc boinc         0 Feb 11 15:56 boinc_lockfile
[2026-02-11 17:00:12] -rw-r--r-- 1 boinc boinc      2554 Feb 11 15:56 pandaJob.out
[2026-02-11 17:00:12] -rw------- 1 boinc boinc   1008965 Feb 11 15:56 agis_schedconf.cvmfs.json
[2026-02-11 17:00:12] -rw------- 1 boinc boinc   1512955 Feb 11 15:56 agis_ddmendpoints.agis.ALL.json
[2026-02-11 17:00:12] -rw------- 1 boinc boinc       433 Feb 11 15:57 workernode_map.json
[2026-02-11 17:00:12] drwx------ 5 boinc boinc      4096 Feb 11 15:57 pilot3
[2026-02-11 17:00:12] -rw------- 1 boinc boinc 281693132 Feb 11 16:58 HITS.48431096._003256.pool.root.1
[2026-02-11 17:00:12] -rw-r--r-- 1 boinc boinc       530 Feb 11 16:58 boinc_task_state.xml
[2026-02-11 17:00:12] -rw------- 1 boinc boinc      1015 Feb 11 16:59 memory_monitor_summary.json
[2026-02-11 17:00:12] -rw------- 1 boinc boinc    400526 Feb 11 16:59 log.48431096._003256.job.log.tgz.1
[2026-02-11 17:00:12] -rw------- 1 boinc boinc      6319 Feb 11 16:59 heartbeat.json
[2026-02-11 17:00:12] -rw------- 1 boinc boinc        95 Feb 11 16:59 pilot_heartbeat.json
[2026-02-11 17:00:12] -rw-r--r-- 1 boinc boinc      8192 Feb 11 16:59 boinc_mmap_file
[2026-02-11 17:00:12] -rw-r--r-- 1 boinc boinc        27 Feb 11 16:59 wrapper_checkpoint.txt
[2026-02-11 17:00:12] -rw------- 1 boinc boinc      5077 Feb 11 17:00 pilotlog.txt
[2026-02-11 17:00:12] -rw------- 1 boinc boinc    567431 Feb 11 17:00 log.48431096._003256.job.log.1
[2026-02-11 17:00:12] -rw------- 1 boinc boinc       357 Feb 11 17:00 output.list
[2026-02-11 17:00:12] -rw-r--r-- 1 boinc boinc       620 Feb 11 17:00 runtime_log
[2026-02-11 17:00:12] -rw------- 1 boinc boinc    983040 Feb 11 17:00 result.tar.gz
[2026-02-11 17:00:12] -rw------- 1 boinc boinc       661 Feb 11 17:00 yEzMDmOIO78n9Rq4apOajLDm4fhM0noT9bVooX4SDmxzTKDmu6IwMm.diag
[2026-02-11 17:00:12] -rw-r--r-- 1 boinc boinc      8853 Feb 11 17:00 runtime_log.err
[2026-02-11 17:00:12] -rw-r--r-- 1 boinc boinc     21516 Feb 11 17:00 stderr.txt
[2026-02-11 17:00:12] HITS file was successfully produced:
[2026-02-11 17:00:12] -rw------- 1 boinc boinc 281693132 Feb 11 16:58 shared/HITS.pool.root.1
[2026-02-11 17:00:12]  *** Contents of shared directory: ***
[2026-02-11 17:00:12] total 932692
[2026-02-11 17:00:12] -rw-r--r-- 2 boinc boinc 671774839 Feb 11 15:56 ATLAS.root_0
[2026-02-11 17:00:12] -rw-r--r-- 2 boinc boinc     15845 Feb 11 15:56 start_atlas.sh
[2026-02-11 17:00:12] -rw-r--r-- 2 boinc boinc    597770 Feb 11 15:56 input.tar.gz
[2026-02-11 17:00:12] -rw------- 1 boinc boinc 281693132 Feb 11 16:58 HITS.pool.root.1
[2026-02-11 17:00:12] -rw------- 1 boinc boinc    983040 Feb 11 17:00 result.tar.gz
17:00:13 (3834034): run_atlas exited; CPU time 40454.699405
17:00:13 (3834034): called boinc_finish(0)

</stderr_txt>
]]>

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