Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
16:30:29 (580467): wrapper (7.7.26015): starting
16:30:29 (580467): wrapper: running run_atlas (--nthreads 12)
[2026-02-11 16:30:29] Arguments: --nthreads 12
[2026-02-11 16:30:29] Threads: 12
[2026-02-11 16:30:29] Checking for CVMFS
[2026-02-11 16:30:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 16:30:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 16:30:32] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 16:30:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 16:30:33] 2.13.3.0 580747 0 25584 156122 4 1 3977106 4096001 0 130560 0 0 0.000 1336 718 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-11 16:30:33] CVMFS is ok
[2026-02-11 16:30:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-11 16:30:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-11 16:30:33] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-11 16:30:33] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-11 16:30:33] Further information can be found at the LHC@home message board.
[2026-02-11 16:30:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 16:30:33] Checking for apptainer binary...
[2026-02-11 16:30:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-11 16:30:33] Running /usr/bin/apptainer --version
[2026-02-11 16:30:33] apptainer version 1.4.5
[2026-02-11 16:30:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 16:30:33] test-run
[2026-02-11 16:30:33] apptainer works
[2026-02-11 16:30:33] Set ATHENA_PROC_NUMBER=12
[2026-02-11 16:30:33] Set ATHENA_CORE_NUMBER=12
[2026-02-11 16:30:33] Starting ATLAS job with PandaID=7008421042
[2026-02-11 16:30:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-11 17:11:11]  *** The last 200 lines of the pilot log: ***
[2026-02-11 17:11:11]  is_altstaged=None
[2026-02-11 17:11:11]  is_tar=False
[2026-02-11 17:11:11]  lfn=log.48508763._002698.job.log.tgz.1
[2026-02-11 17:11:11]  mtime=0
[2026-02-11 17:11:11]  protocol_id=None
[2026-02-11 17:11:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-11 17:11:11]  replicas=None
[2026-02-11 17:11:11]  scope=mc23_13p6TeV
[2026-02-11 17:11:11]  status=None
[2026-02-11 17:11:11]  status_code=0
[2026-02-11 17:11:11]  storage_token=
[2026-02-11 17:11:11]  surl=/var/lib/boinc-client/slots/18/PanDA_Pilot-7008421042/log.48508763._002698.job.log.tgz.1
[2026-02-11 17:11:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/c4/log.48508763._002698.job.log.tgz.1
[2026-02-11 17:11:11]  workdir=None
[2026-02-11 17:11:11] ]
[2026-02-11 17:11:11] 2026-02-11 17:10:39,459 | INFO     | transferring file log.48508763._002698.job.log.tgz.1 from /var/lib/boinc-client/slots/18/PanDA_Pilot-7008421042/log.48508763._002698.job.log.tgz.1 to /var/lib/boin
[2026-02-11 17:11:11] 2026-02-11 17:10:39,459 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/18/PanDA_Pilot-7008421042/log.48508763._002698.job.log.tgz.1 /var/lib/boinc-client/slots/18/log.4850
[2026-02-11 17:11:11] 2026-02-11 17:10:39,464 | INFO     | adding to output.list: log.48508763._002698.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/c4/log.48508763._002698.job.log.tg
[2026-02-11 17:11:11] 2026-02-11 17:10:39,465 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-11 17:11:11] 2026-02-11 17:10:39,465 | INFO     | summary of transferred files:
[2026-02-11 17:11:11] 2026-02-11 17:10:39,465 | INFO     |  -- lfn=log.48508763._002698.job.log.tgz.1, status_code=0, status=transferred
[2026-02-11 17:11:11] 2026-02-11 17:10:39,465 | INFO     | stage-out finished correctly
[2026-02-11 17:11:11] 2026-02-11 17:10:39,479 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-11 17:11:11] 2026-02-11 17:10:39,494 | INFO     | job 7008421042 has state=finished
[2026-02-11 17:11:11] 2026-02-11 17:10:39,494 | INFO     | preparing for final server update for job 7008421042 in state='finished'
[2026-02-11 17:11:11] 2026-02-11 17:10:39,852 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-11 17:11:11] 2026-02-11 17:10:39,853 | INFO     | reading metadata from: /var/lib/boinc-client/slots/18/PanDA_Pilot-7008421042/jobReport.json
[2026-02-11 17:11:11] 2026-02-11 17:10:39,853 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/18/workernode_map.json
[2026-02-11 17:11:11] 2026-02-11 17:10:39,853 | INFO     | this job has now completed (state=finished)
[2026-02-11 17:11:11] 2026-02-11 17:10:39,853 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-11 17:11:11] 2026-02-11 17:10:39,853 | INFO     | log transfer has been attempted: DONE
[2026-02-11 17:11:11] 2026-02-11 17:10:39,853 | INFO     | job 7008421042 has finished - writing final server update
[2026-02-11 17:11:11] 2026-02-11 17:10:39,853 | INFO     | total number of processed events: 400 (read)
[2026-02-11 17:11:11] 2026-02-11 17:10:39,854 | INFO     | using path: /var/lib/boinc-client/slots/18/PanDA_Pilot-7008421042/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 17:11:11] 2026-02-11 17:10:39,854 | INFO     | extracted standard info from prmon json
[2026-02-11 17:11:11] 2026-02-11 17:10:39,854 | INFO     | extracted standard memory fields from prmon json
[2026-02-11 17:11:11] 2026-02-11 17:10:39,854 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-11 17:11:11] 2026-02-11 17:10:39,854 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-11 17:11:11] 2026-02-11 17:10:39,854 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-11 17:11:11] 2026-02-11 17:10:39,855 | INFO     | fitting pss+swap vs Time
[2026-02-11 17:11:11] 2026-02-11 17:10:39,855 | INFO     | sum of square deviations: 10150888.0
[2026-02-11 17:11:11] 2026-02-11 17:10:39,855 | INFO     | sum of deviations: 2273571534.5
[2026-02-11 17:11:11] 2026-02-11 17:10:39,855 | INFO     | mean x: 1770828710.5
[2026-02-11 17:11:11] 2026-02-11 17:10:39,855 | INFO     | mean y: 2878819.53125
[2026-02-11 17:11:11] 2026-02-11 17:10:39,855 | INFO     | intersect: -396623086186.4999
[2026-02-11 17:11:11] 2026-02-11 17:10:39,855 | INFO     | chi2: 0.38133794028587414
[2026-02-11 17:11:11] 2026-02-11 17:10:39,855 | INFO     | current memory leak: 223.98 B/s (using 32 data points, chi2=0.38)
[2026-02-11 17:11:11] 2026-02-11 17:10:39,855 | INFO     | could have reported an average CPU frequency of 4291 MHz (5 samples)
[2026-02-11 17:11:11] 2026-02-11 17:10:39,855 | INFO     | ..............................
[2026-02-11 17:11:11] 2026-02-11 17:10:39,855 | INFO     | . Timing measurements:
[2026-02-11 17:11:11] 2026-02-11 17:10:39,855 | INFO     | . get job = 0 s
[2026-02-11 17:11:11] 2026-02-11 17:10:39,855 | INFO     | . initial setup = 3 s
[2026-02-11 17:11:11] 2026-02-11 17:10:39,855 | INFO     | . payload setup = 1 s
[2026-02-11 17:11:11] 2026-02-11 17:10:39,855 | INFO     | . stage-in = 0 s
[2026-02-11 17:11:11] 2026-02-11 17:10:39,855 | INFO     | . payload execution = 2378 s
[2026-02-11 17:11:11] 2026-02-11 17:10:39,855 | INFO     | . stage-out = 0 s
[2026-02-11 17:11:11] 2026-02-11 17:10:39,855 | INFO     | . log creation = 0 s
[2026-02-11 17:11:11] 2026-02-11 17:10:39,855 | INFO     | ..............................
[2026-02-11 17:11:11] 2026-02-11 17:10:39,872 | INFO     | 
[2026-02-11 17:11:11] 2026-02-11 17:10:39,872 | INFO     | job summary report
[2026-02-11 17:11:11] 2026-02-11 17:10:39,872 | INFO     | --------------------------------------------------
[2026-02-11 17:11:11] 2026-02-11 17:10:39,872 | INFO     | PanDA job id: 7008421042
[2026-02-11 17:11:11] 2026-02-11 17:10:39,872 | INFO     | task id: 48508763
[2026-02-11 17:11:11] 2026-02-11 17:10:39,872 | INFO     | errors: (none)
[2026-02-11 17:11:11] 2026-02-11 17:10:39,872 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-11 17:11:11] 2026-02-11 17:10:39,872 | INFO     | pilot state: finished 
[2026-02-11 17:11:11] 2026-02-11 17:10:39,872 | INFO     | transexitcode: 0
[2026-02-11 17:11:11] 2026-02-11 17:10:39,872 | INFO     | exeerrorcode: 0
[2026-02-11 17:11:11] 2026-02-11 17:10:39,872 | INFO     | exeerrordiag: 
[2026-02-11 17:11:11] 2026-02-11 17:10:39,872 | INFO     | exitcode: 0
[2026-02-11 17:11:11] 2026-02-11 17:10:39,872 | INFO     | exitmsg: OK
[2026-02-11 17:11:11] 2026-02-11 17:10:39,872 | INFO     | cpuconsumptiontime: 23064 s
[2026-02-11 17:11:11] 2026-02-11 17:10:39,872 | INFO     | nevents: 400
[2026-02-11 17:11:11] 2026-02-11 17:10:39,872 | INFO     | neventsw: 0
[2026-02-11 17:11:11] 2026-02-11 17:10:39,872 | INFO     | pid: 597894
[2026-02-11 17:11:11] 2026-02-11 17:10:39,872 | INFO     | pgrp: 597894
[2026-02-11 17:11:11] 2026-02-11 17:10:39,872 | INFO     | corecount: 12
[2026-02-11 17:11:11] 2026-02-11 17:10:39,872 | INFO     | event service: False
[2026-02-11 17:11:11] 2026-02-11 17:10:39,872 | INFO     | sizes: {0: 2282262, 11: 2282262, 2383: 2316667}
[2026-02-11 17:11:11] 2026-02-11 17:10:39,872 | INFO     | --------------------------------------------------
[2026-02-11 17:11:11] 2026-02-11 17:10:39,872 | INFO     | 
[2026-02-11 17:11:11] 2026-02-11 17:10:39,872 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/18
[2026-02-11 17:11:11] 2026-02-11 17:10:39,879 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-11 17:11:11] 2026-02-11 17:10:39,879 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-11 17:11:11] 2026-02-11 17:10:39,879 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-11 17:11:11] 2026-02-11 17:10:39,879 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-11 17:11:11] 2026-02-11 17:10:39,879 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-11 17:11:11] 2026-02-11 17:10:39,879 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-11 17:11:11] 2026-02-11 17:10:39,879 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-11 17:11:11] 2026-02-11 17:10:39,879 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-11 17:11:11] 2026-02-11 17:10:39,879 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-11 17:11:11] 2026-02-11 17:10:39,879 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-11 17:11:11] 2026-02-11 17:10:39,879 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-11 17:11:11] 2026-02-11 17:10:39,879 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-11 17:11:11] 2026-02-11 17:10:39,879 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-11 17:11:11] 2026-02-11 17:10:39,879 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-11 17:11:11] 2026-02-11 17:10:39,879 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-11 17:11:11] 2026-02-11 17:10:39,879 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-11 17:11:11] 2026-02-11 17:10:39,879 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-11 17:11:11] 2026-02-11 17:10:39,879 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-11 17:11:11] 2026-02-11 17:10:39,879 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-11 17:11:11] 2026-02-11 17:10:39,879 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-11 17:11:11] 2026-02-11 17:10:39,879 | INFO     | job 7008421042 has completed (purged errors)
[2026-02-11 17:11:11] 2026-02-11 17:10:39,879 | INFO     | overall cleanup function is called
[2026-02-11 17:11:11] 2026-02-11 17:10:40,885 | INFO     | --- collectZombieJob: --- 10, [597894]
[2026-02-11 17:11:11] 2026-02-11 17:10:40,885 | INFO     | zombie collector waiting for pid 597894
[2026-02-11 17:11:11] 2026-02-11 17:10:40,885 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-11 17:11:11] 2026-02-11 17:10:40,885 | INFO     | collected zombie processes
[2026-02-11 17:11:11] 2026-02-11 17:10:40,885 | INFO     | will attempt to kill all subprocesses of pid=597894
[2026-02-11 17:11:11] 2026-02-11 17:10:40,900 | INFO     | process IDs to be killed: [597894] (in reverse order)
[2026-02-11 17:11:11] 2026-02-11 17:10:40,911 | WARNING  | found no corresponding commands to process id(s)
[2026-02-11 17:11:11] 2026-02-11 17:10:40,911 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-11 17:11:11] 2026-02-11 17:10:40,911 | INFO     | did not find any defunct processes belonging to 597894
[2026-02-11 17:11:11] 2026-02-11 17:10:40,912 | INFO     | did not find any defunct processes belonging to 597894
[2026-02-11 17:11:11] 2026-02-11 17:10:40,912 | INFO     | ready for new job
[2026-02-11 17:11:11] 2026-02-11 17:10:40,912 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-11 17:11:11] 2026-02-11 17:10:40,912 | INFO     | **************************************
[2026-02-11 17:11:11] 2026-02-11 17:10:40,912 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-11 17:11:11] 2026-02-11 17:10:40,912 | INFO     | **************************************
[2026-02-11 17:11:11] 2026-02-11 17:10:40,912 | INFO     | 
[2026-02-11 17:11:11] 2026-02-11 17:10:40,912 | INFO     | pilot is running in a VM
[2026-02-11 17:11:11] 2026-02-11 17:10:40,912 | INFO     | architecture information:
[2026-02-11 17:11:11] 2026-02-11 17:10:40,912 | INFO     | executing command: cat /etc/os-release
[2026-02-11 17:11:11] 2026-02-11 17:10:40,917 | INFO     | cat /etc/os-release:
[2026-02-11 17:11:11] NAME="CentOS Linux"
[2026-02-11 17:11:11] VERSION="7 (Core)"
[2026-02-11 17:11:11] ID="centos"
[2026-02-11 17:11:11] ID_LIKE="rhel fedora"
[2026-02-11 17:11:11] VERSION_ID="7"
[2026-02-11 17:11:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-11 17:11:11] ANSI_COLOR="0;31"
[2026-02-11 17:11:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-11 17:11:11] HOME_URL="https://www.centos.org/"
[2026-02-11 17:11:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-11 17:11:11] 
[2026-02-11 17:11:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-11 17:11:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-11 17:11:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-11 17:11:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-11 17:11:11] 
[2026-02-11 17:11:11] 2026-02-11 17:10:40,917 | INFO     | **************************************
[2026-02-11 17:11:11] 2026-02-11 17:10:41,420 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/18
[2026-02-11 17:11:11] 2026-02-11 17:10:41,426 | INFO     | sufficient remaining disk space (58496909312 B)
[2026-02-11 17:11:11] 2026-02-11 17:10:41,426 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-11 17:11:11] 2026-02-11 17:10:41,426 | INFO     | current server update state: UPDATING_FINAL
[2026-02-11 17:11:11] 2026-02-11 17:10:41,426 | INFO     | update_server=False
[2026-02-11 17:11:11] 2026-02-11 17:10:41,426 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-11 17:11:11] 2026-02-11 17:10:41,426 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-11 17:11:11] 2026-02-11 17:10:41,426 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-11 17:11:11] 2026-02-11 17:10:41,741 | INFO     | all data control threads have been joined
[2026-02-11 17:11:11] 2026-02-11 17:10:41,782 | INFO     | all job control threads have been joined
[2026-02-11 17:11:11] 2026-02-11 17:10:42,305 | INFO     | all payload control threads have been joined
[2026-02-11 17:11:11] 2026-02-11 17:10:42,431 | INFO     | [job] retrieve thread has finished
[2026-02-11 17:11:11] 2026-02-11 17:10:42,431 | INFO     | [job] queue monitor thread has finished
[2026-02-11 17:11:11] 2026-02-11 17:10:42,484 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-11 17:11:11] 2026-02-11 17:10:42,694 | INFO     | [payload] failed_post thread has finished
[2026-02-11 17:11:11] 2026-02-11 17:10:42,746 | INFO     | [data] control thread has finished
[2026-02-11 17:11:11] 2026-02-11 17:10:42,788 | INFO     | [job] control thread has finished
[2026-02-11 17:11:11] 2026-02-11 17:10:42,914 | INFO     | [payload] validate_pre thread has finished
[2026-02-11 17:11:11] 2026-02-11 17:10:42,971 | INFO     | [job] validate thread has finished
[2026-02-11 17:11:11] 2026-02-11 17:10:42,980 | INFO     | [job] create_data_payload thread has finished
[2026-02-11 17:11:11] 2026-02-11 17:10:43,049 | WARNING  | process 597894 can no longer be monitored (due to stat problems) - aborting
[2026-02-11 17:11:11] 2026-02-11 17:10:43,060 | INFO     | using path: /var/lib/boinc-client/slots/18/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 17:11:11] 2026-02-11 17:10:43,072 | INFO     | number of running child processes to parent process 597894: 1
[2026-02-11 17:11:11] 2026-02-11 17:10:43,072 | INFO     | maximum number of monitored processes: 6
[2026-02-11 17:11:11] 2026-02-11 17:10:43,072 | INFO     | aborting job monitoring since job object (job id=7008421042) has expired
[2026-02-11 17:11:11] 2026-02-11 17:10:43,072 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-11 17:11:11] 2026-02-11 17:10:43,072 | INFO     | will abort loop
[2026-02-11 17:11:11] 2026-02-11 17:10:43,140 | INFO     | [data] copytool_in thread has finished
[2026-02-11 17:11:11] 2026-02-11 17:10:43,261 | INFO     | [payload] execute_payloads thread has finished
[2026-02-11 17:11:11] 2026-02-11 17:10:43,310 | INFO     | [payload] control thread has finished
[2026-02-11 17:11:11] 2026-02-11 17:10:43,477 | INFO     | [payload] validate_post thread has finished
[2026-02-11 17:11:11] 2026-02-11 17:10:44,077 | INFO     | [job] job monitor thread has finished
[2026-02-11 17:11:11] 2026-02-11 17:10:44,490 | INFO     | [data] copytool_out thread has finished
[2026-02-11 17:11:11] 2026-02-11 17:10:45,432 | INFO     | [data] queue_monitor thread has finished
[2026-02-11 17:11:11] 2026-02-11 17:10:48,675 | INFO     | [monitor] cgroup control has ended
[2026-02-11 17:11:11] 2026-02-11 17:10:52,225 | INFO     | job.realtimelogging is not enabled
[2026-02-11 17:11:11] 2026-02-11 17:10:53,230 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-11 17:11:11] 2026-02-11 17:10:54,399 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128605734582080)>', '<ExcThread(monitor, started 128605371737856)>']
[2026-02-11 17:11:11] 2026-02-11 17:10:59,412 | INFO     | all workflow threads have been joined
[2026-02-11 17:11:11] 2026-02-11 17:10:59,412 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-11 17:11:11] 2026-02-11 17:10:59,412 | INFO     | traces error code: 0
[2026-02-11 17:11:11] 2026-02-11 17:10:59,412 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-11 17:11:11] 2026-02-11 17:11:11,775 | INFO     | PID=588765 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-11 17:11:11] 2026-02-11 17:11:11,775 | INFO     | .. there are 2 such processes running
[2026-02-11 17:11:11] 2026-02-11 17:11:11,776 | INFO     | found 0 job(s) in 20 queues
[2026-02-11 17:11:11] 2026-02-11 17:11:11,776 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-11 17:11:11] 2026-02-11 17:11:11,776 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-11 17:11:11] 2026-02-11 17:11:11,776 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-11 17:11:11] 2026-02-11 17:11:11,776 | INFO     | [monitor] control thread has ended
[2026-02-11 17:11:11] 2026-02-11 17:11:11,807 [wrapper] ==== pilot stdout END ====
[2026-02-11 17:11:11] 2026-02-11 17:11:11,808 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-11 17:11:11] 2026-02-11 17:11:11,809 [wrapper] pilotpid: 588765
[2026-02-11 17:11:11] 2026-02-11 17:11:11,809 [wrapper] Pilot exit status: 0
[2026-02-11 17:11:11] 2026-02-11 17:11:11,811 [wrapper] pandaids: 7008421042
[2026-02-11 17:11:11] 2026-02-11 17:11:11,818 [wrapper] cleanup supervisor_pilot  607216 588766
[2026-02-11 17:11:11] 2026-02-11 17:11:11,819 [wrapper] Test setup, not cleaning
[2026-02-11 17:11:11] 2026-02-11 17:11:11,820 [wrapper] apfmon messages muted
[2026-02-11 17:11:11] 2026-02-11 17:11:11,820 [wrapper] ==== wrapper stdout END ====
[2026-02-11 17:11:11] 2026-02-11 17:11:11,821 [wrapper] ==== wrapper stderr END ====
[2026-02-11 17:11:11]  *** Error codes and diagnostics ***
[2026-02-11 17:11:11]     "exeErrorCode": 0,
[2026-02-11 17:11:11]     "exeErrorDiag": "",
[2026-02-11 17:11:11]     "pilotErrorCode": 0,
[2026-02-11 17:11:11]     "pilotErrorDiag": "",
[2026-02-11 17:11:11]  *** Listing of results directory ***
[2026-02-11 17:11:11] total 949468
[2026-02-11 17:11:11] -rw-r--r-- 1 boinc boinc    584627 Feb 11 03:39 pilot3.tar.gz
[2026-02-11 17:11:11] -rwx------ 1 boinc boinc     36322 Feb 11 03:43 runpilot2-wrapper.sh
[2026-02-11 17:11:11] -rw-r--r-- 1 boinc boinc      5111 Feb 11 03:47 queuedata.json
[2026-02-11 17:11:11] -rw-r--r-- 1 boinc boinc       100 Feb 11 16:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-11 17:11:11] -rwxr-xr-x 1 boinc boinc      7986 Feb 11 16:30 run_atlas
[2026-02-11 17:11:11] -rw-r--r-- 1 boinc boinc       105 Feb 11 16:30 job.xml
[2026-02-11 17:11:11] -rw-r--r-- 1 boinc boinc      7994 Feb 11 16:30 init_data.xml
[2026-02-11 17:11:11] -rw-r--r-- 2 boinc boinc 682661940 Feb 11 16:30 EVNT.48508760._000053.pool.root.1
[2026-02-11 17:11:11] -rw-r--r-- 2 boinc boinc     15845 Feb 11 16:30 start_atlas.sh
[2026-02-11 17:11:11] drwxrwx--x 2 boinc boinc      4096 Feb 11 16:30 shared
[2026-02-11 17:11:11] -rw-r--r-- 2 boinc boinc    597962 Feb 11 16:30 input.tar.gz
[2026-02-11 17:11:11] -rw-r--r-- 1 boinc boinc         0 Feb 11 16:30 boinc_lockfile
[2026-02-11 17:11:11] -rw-r--r-- 1 boinc boinc      2548 Feb 11 16:30 pandaJob.out
[2026-02-11 17:11:11] -rw------- 1 boinc boinc   1008160 Feb 11 16:30 agis_schedconf.cvmfs.json
[2026-02-11 17:11:11] -rw------- 1 boinc boinc   1512955 Feb 11 16:30 agis_ddmendpoints.agis.ALL.json
[2026-02-11 17:11:11] -rw------- 1 boinc boinc       420 Feb 11 16:30 workernode_map.json
[2026-02-11 17:11:11] drwx------ 5 boinc boinc      4096 Feb 11 16:30 pilot3
[2026-02-11 17:11:11] -rw------- 1 boinc boinc 284185723 Feb 11 17:10 HITS.48508763._002698.pool.root.1
[2026-02-11 17:11:11] -rw-r--r-- 1 boinc boinc       530 Feb 11 17:10 boinc_task_state.xml
[2026-02-11 17:11:11] -rw------- 1 boinc boinc      1021 Feb 11 17:10 memory_monitor_summary.json
[2026-02-11 17:11:11] -rw------- 1 boinc boinc    345141 Feb 11 17:10 log.48508763._002698.job.log.tgz.1
[2026-02-11 17:11:11] -rw------- 1 boinc boinc      6279 Feb 11 17:10 heartbeat.json
[2026-02-11 17:11:11] -rw-r--r-- 1 boinc boinc      8192 Feb 11 17:11 boinc_mmap_file
[2026-02-11 17:11:11] -rw-r--r-- 1 boinc boinc        27 Feb 11 17:11 wrapper_checkpoint.txt
[2026-02-11 17:11:11] -rw------- 1 boinc boinc       821 Feb 11 17:11 pilotlog.txt
[2026-02-11 17:11:11] -rw------- 1 boinc boinc        95 Feb 11 17:11 pilot_heartbeat.json
[2026-02-11 17:11:11] -rw------- 1 boinc boinc    389572 Feb 11 17:11 log.48508763._002698.job.log.1
[2026-02-11 17:11:11] -rw------- 1 boinc boinc       357 Feb 11 17:11 output.list
[2026-02-11 17:11:11] -rw-r--r-- 1 boinc boinc       620 Feb 11 17:11 runtime_log
[2026-02-11 17:11:11] -rw------- 1 boinc boinc    747520 Feb 11 17:11 result.tar.gz
[2026-02-11 17:11:11] -rw-r--r-- 1 boinc boinc      8905 Feb 11 17:11 runtime_log.err
[2026-02-11 17:11:11] -rw------- 1 boinc boinc       642 Feb 11 17:11 bTONDmWJGA9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmxajKDmeuclHo.diag
[2026-02-11 17:11:11] -rw-r--r-- 1 boinc boinc     21582 Feb 11 17:11 stderr.txt
[2026-02-11 17:11:11] HITS file was successfully produced:
[2026-02-11 17:11:11] -rw------- 1 boinc boinc 284185723 Feb 11 17:10 shared/HITS.pool.root.1
[2026-02-11 17:11:11]  *** Contents of shared directory: ***
[2026-02-11 17:11:11] total 945532
[2026-02-11 17:11:11] -rw-r--r-- 2 boinc boinc 682661940 Feb 11 16:30 ATLAS.root_0
[2026-02-11 17:11:11] -rw-r--r-- 2 boinc boinc     15845 Feb 11 16:30 start_atlas.sh
[2026-02-11 17:11:11] -rw-r--r-- 2 boinc boinc    597962 Feb 11 16:30 input.tar.gz
[2026-02-11 17:11:11] -rw------- 1 boinc boinc 284185723 Feb 11 17:10 HITS.pool.root.1
[2026-02-11 17:11:11] -rw------- 1 boinc boinc    747520 Feb 11 17:11 result.tar.gz
17:11:13 (580467): run_atlas exited; CPU time 23072.153813
17:11:13 (580467): called boinc_finish(0)

</stderr_txt>
]]>

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