Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:22:53 (681657): wrapper (7.7.26015): starting
05:22:53 (681657): wrapper: running run_atlas (--nthreads 8)
[2026-02-11 05:22:53] Arguments: --nthreads 8
[2026-02-11 05:22:53] Threads: 8
[2026-02-11 05:22:53] Checking for CVMFS
[2026-02-11 05:22:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 05:22:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 05:22:54] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 05:22:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 05:22:55] 2.13.3.0 11771 140759 270728 156112 2 272 24051911 32935937 47043 16776704 0 831887819 99.534 1010048508 37211 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-11 05:22:55] CVMFS is ok
[2026-02-11 05:22:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-11 05:22:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-11 05:22:55] Further information can be found at the LHC@home message board.
[2026-02-11 05:22:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 05:22:55] Checking for apptainer binary...
[2026-02-11 05:22:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-11 05:22:55] Running /usr/bin/apptainer --version
[2026-02-11 05:22:55] apptainer version 1.4.5-2.el9
[2026-02-11 05:22:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 05:22:56] c7-2-14.aglt2.org
[2026-02-11 05:22:56] apptainer works
[2026-02-11 05:22:56] Set ATHENA_PROC_NUMBER=8
[2026-02-11 05:22:56] Set ATHENA_CORE_NUMBER=8
[2026-02-11 05:22:56] Starting ATLAS job with PandaID=7000475948
[2026-02-11 05:22:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
08:00:06 (681657): BOINC client no longer exists - exiting
08:00:06 (681657): timer handler: client dead, exiting
08:11:28 (1599472): wrapper (7.7.26015): starting
08:11:28 (1599472): wrapper: running run_atlas (--nthreads 8)
[2026-02-11 08:11:28] Arguments: --nthreads 8
[2026-02-11 08:11:28] Threads: 8
[2026-02-11 08:11:28] This job has been restarted, cleaning up previous attempt
[2026-02-11 08:11:28] Checking for CVMFS
[2026-02-11 08:11:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 08:11:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 08:11:28] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 08:11:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 08:11:28] 2.13.3.0 11771 140927 279912 156116 2 87 31102043 32935937 43527 16776704 0 832942143 99.534 1010981948 37208 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-11 08:11:28] CVMFS is ok
[2026-02-11 08:11:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-11 08:11:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-11 08:11:28] Further information can be found at the LHC@home message board.
[2026-02-11 08:11:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 08:11:28] Checking for apptainer binary...
[2026-02-11 08:11:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-11 08:11:28] Running /usr/bin/apptainer --version
[2026-02-11 08:11:28] apptainer version 1.4.5-2.el9
[2026-02-11 08:11:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 08:11:29] c7-2-14.aglt2.org
[2026-02-11 08:11:29] apptainer works
[2026-02-11 08:11:29] Set ATHENA_PROC_NUMBER=8
[2026-02-11 08:11:29] Set ATHENA_CORE_NUMBER=8
[2026-02-11 08:11:29] Starting ATLAS job with PandaID=7000475948
[2026-02-11 08:11:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-11 16:22:45]  *** The last 200 lines of the pilot log: ***
[2026-02-11 16:22:45] 2026-02-11 21:21:34,853 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7000475948/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 16:22:45] 2026-02-11 21:21:34,854 | INFO     | extracted standard info from prmon json
[2026-02-11 16:22:45] 2026-02-11 21:21:34,854 | INFO     | extracted standard memory fields from prmon json
[2026-02-11 16:22:45] 2026-02-11 21:21:34,854 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-11 16:22:45] 2026-02-11 21:21:34,854 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-11 16:22:45] 2026-02-11 21:21:34,854 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-11 16:22:45] 2026-02-11 21:21:34,861 | INFO     | fitting pss+swap vs Time
[2026-02-11 16:22:45] 2026-02-11 21:21:34,861 | INFO     | sum of square deviations: 34723366686.90715
[2026-02-11 16:22:45] 2026-02-11 21:21:34,866 | INFO     | sum of deviations: 79048902453.52484
[2026-02-11 16:22:45] 2026-02-11 21:21:34,866 | INFO     | mean x: 1770830209.641079
[2026-02-11 16:22:45] 2026-02-11 21:21:34,866 | INFO     | mean y: 2499042.5290456433
[2026-02-11 16:22:45] 2026-02-11 21:21:34,866 | INFO     | intersect: -4028854995.3976545
[2026-02-11 16:22:45] 2026-02-11 21:21:34,867 | INFO     | chi2: 2.215077204580309
[2026-02-11 16:22:45] 2026-02-11 21:21:34,879 | INFO     | sum of square deviations: 33653933443.5891
[2026-02-11 16:22:45] 2026-02-11 21:21:34,913 | INFO     | sum of deviations: 108664291634.4633
[2026-02-11 16:22:45] 2026-02-11 21:21:34,913 | INFO     | mean x: 1770830057.1404612
[2026-02-11 16:22:45] 2026-02-11 21:21:34,913 | INFO     | mean y: 2503229.5303983227
[2026-02-11 16:22:45] 2026-02-11 21:21:34,913 | INFO     | intersect: -5715282897.512666
[2026-02-11 16:22:45] 2026-02-11 21:21:34,914 | INFO     | chi2: 1.5256670943975446
[2026-02-11 16:22:45] 2026-02-11 21:21:34,914 | INFO     | current chi2=1.5256670943975446 (change=31.12352511945005 %)
[2026-02-11 16:22:45] 2026-02-11 21:21:34,914 | INFO     | sum of square deviations: 32606715638.48928
[2026-02-11 16:22:45] 2026-02-11 21:21:34,928 | INFO     | sum of deviations: 107482344699.74365
[2026-02-11 16:22:45] 2026-02-11 21:21:34,928 | INFO     | mean x: 1770829904.6419492
[2026-02-11 16:22:45] 2026-02-11 21:21:34,929 | INFO     | mean y: 2503057.2351694917
[2026-02-11 16:22:45] 2026-02-11 21:21:34,929 | INFO     | intersect: -5834728521.853076
[2026-02-11 16:22:45] 2026-02-11 21:21:34,929 | INFO     | chi2: 1.5256600094638497
[2026-02-11 16:22:45] 2026-02-11 21:21:34,929 | INFO     | current chi2=1.5256600094638497 (change=0.0004643826769844508 %)
[2026-02-11 16:22:45] 2026-02-11 21:21:34,929 | INFO     | right removable region: 471
[2026-02-11 16:22:45] 2026-02-11 21:21:34,941 | INFO     | sum of square deviations: 33653921244.305935
[2026-02-11 16:22:45] 2026-02-11 21:21:34,945 | INFO     | sum of deviations: 82968298.74005508
[2026-02-11 16:22:45] 2026-02-11 21:21:34,945 | INFO     | mean x: 1770830362.1425576
[2026-02-11 16:22:45] 2026-02-11 21:21:34,946 | INFO     | mean y: 2510254.180293501
[2026-02-11 16:22:45] 2026-02-11 21:21:34,946 | INFO     | intersect: -1855441.615974585
[2026-02-11 16:22:45] 2026-02-11 21:21:34,946 | INFO     | chi2: 0.7130205624276365
[2026-02-11 16:22:45] 2026-02-11 21:21:34,946 | INFO     | current chi2=0.7130205624276365 (change=67.81057739417562 %)
[2026-02-11 16:22:45] 2026-02-11 21:21:34,947 | INFO     | sum of square deviations: 32606662264.203224
[2026-02-11 16:22:45] 2026-02-11 21:21:34,951 | INFO     | sum of deviations: -5307174656.677959
[2026-02-11 16:22:45] 2026-02-11 21:21:34,951 | INFO     | mean x: 1770830514.6440678
[2026-02-11 16:22:45] 2026-02-11 21:21:34,951 | INFO     | mean y: 2511035.311440678
[2026-02-11 16:22:45] 2026-02-11 21:21:34,951 | INFO     | intersect: 290737617.7331738
[2026-02-11 16:22:45] 2026-02-11 21:21:34,951 | INFO     | chi2: 0.7000838902849504
[2026-02-11 16:22:45] 2026-02-11 21:21:34,951 | INFO     | current chi2=0.7000838902849504 (change=1.8143476954774271 %)
[2026-02-11 16:22:45] 2026-02-11 21:21:34,951 | INFO     | left removable region: 20
[2026-02-11 16:22:45] 2026-02-11 21:21:34,952 | INFO     | sum of square deviations: 28445265077.04656
[2026-02-11 16:22:45] 2026-02-11 21:21:34,956 | INFO     | sum of deviations: 19167420818.54989
[2026-02-11 16:22:45] 2026-02-11 21:21:34,956 | INFO     | mean x: 1770830484.1485589
[2026-02-11 16:22:45] 2026-02-11 21:21:34,956 | INFO     | mean y: 2516171.2305986695
[2026-02-11 16:22:45] 2026-02-11 21:21:34,956 | INFO     | intersect: -1190731738.2564888
[2026-02-11 16:22:45] 2026-02-11 21:21:34,956 | INFO     | chi2: 0.002076538745081804
[2026-02-11 16:22:45] 2026-02-11 21:21:34,956 | INFO     | current memory leak: 0.67 B/s (using 451 data points, chi2=0.00)
[2026-02-11 16:22:45] 2026-02-11 21:21:34,957 | INFO     | could have reported an average CPU frequency of 3270 MHz (20 samples)
[2026-02-11 16:22:45] 2026-02-11 21:21:34,957 | INFO     | ..............................
[2026-02-11 16:22:45] 2026-02-11 21:21:34,957 | INFO     | . Timing measurements:
[2026-02-11 16:22:45] 2026-02-11 21:21:34,957 | INFO     | . get job = 0 s
[2026-02-11 16:22:45] 2026-02-11 21:21:34,958 | INFO     | . initial setup = 1 s
[2026-02-11 16:22:45] 2026-02-11 21:21:34,958 | INFO     | . payload setup = 9 s
[2026-02-11 16:22:45] 2026-02-11 21:21:34,958 | INFO     | . stage-in = 0 s
[2026-02-11 16:22:45] 2026-02-11 21:21:34,958 | INFO     | . payload execution = 29354 s
[2026-02-11 16:22:45] 2026-02-11 21:21:34,958 | INFO     | . stage-out = 4 s
[2026-02-11 16:22:45] 2026-02-11 21:21:34,958 | INFO     | . log creation = 0 s
[2026-02-11 16:22:45] 2026-02-11 21:21:34,958 | INFO     | ..............................
[2026-02-11 16:22:45] 2026-02-11 21:21:35,524 | INFO     | 
[2026-02-11 16:22:45] 2026-02-11 21:21:35,524 | INFO     | job summary report
[2026-02-11 16:22:45] 2026-02-11 21:21:35,524 | INFO     | --------------------------------------------------
[2026-02-11 16:22:45] 2026-02-11 21:21:35,524 | INFO     | PanDA job id: 7000475948
[2026-02-11 16:22:45] 2026-02-11 21:21:35,524 | INFO     | task id: 48317892
[2026-02-11 16:22:45] 2026-02-11 21:21:35,524 | INFO     | errors: (none)
[2026-02-11 16:22:45] 2026-02-11 21:21:35,524 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-11 16:22:45] 2026-02-11 21:21:35,524 | INFO     | pilot state: finished 
[2026-02-11 16:22:45] 2026-02-11 21:21:35,524 | INFO     | transexitcode: 0
[2026-02-11 16:22:45] 2026-02-11 21:21:35,525 | INFO     | exeerrorcode: 0
[2026-02-11 16:22:45] 2026-02-11 21:21:35,525 | INFO     | exeerrordiag: 
[2026-02-11 16:22:45] 2026-02-11 21:21:35,525 | INFO     | exitcode: 0
[2026-02-11 16:22:45] 2026-02-11 21:21:35,525 | INFO     | exitmsg: OK
[2026-02-11 16:22:45] 2026-02-11 21:21:35,525 | INFO     | cpuconsumptiontime: 35189 s
[2026-02-11 16:22:45] 2026-02-11 21:21:35,525 | INFO     | nevents: 400
[2026-02-11 16:22:45] 2026-02-11 21:21:35,525 | INFO     | neventsw: 0
[2026-02-11 16:22:45] 2026-02-11 21:21:35,525 | INFO     | pid: 1630056
[2026-02-11 16:22:45] 2026-02-11 21:21:35,525 | INFO     | pgrp: 1630056
[2026-02-11 16:22:45] 2026-02-11 21:21:35,525 | INFO     | corecount: 8
[2026-02-11 16:22:45] 2026-02-11 21:21:35,525 | INFO     | event service: False
[2026-02-11 16:22:45] 2026-02-11 21:21:35,525 | INFO     | sizes: {0: 2281736, 1: 2282197, 11: 2282197, 29370: 2320166, 29375: 2329164, 29378: 2329542}
[2026-02-11 16:22:45] 2026-02-11 21:21:35,525 | INFO     | --------------------------------------------------
[2026-02-11 16:22:45] 2026-02-11 21:21:35,526 | INFO     | 
[2026-02-11 16:22:45] 2026-02-11 21:21:35,526 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-02-11 16:22:45] 2026-02-11 21:21:35,736 | INFO     | time since job start (29389s) is within the limit (349056.0s)
[2026-02-11 16:22:45] 2026-02-11 21:21:35,846 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-11 16:22:45] 2026-02-11 21:21:35,846 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-11 16:22:45] 2026-02-11 21:21:35,846 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-11 16:22:45] 2026-02-11 21:21:35,846 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-11 16:22:45] 2026-02-11 21:21:35,846 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-11 16:22:45] 2026-02-11 21:21:35,846 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-11 16:22:45] 2026-02-11 21:21:35,846 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-11 16:22:45] 2026-02-11 21:21:35,846 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-11 16:22:45] 2026-02-11 21:21:35,846 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-11 16:22:45] 2026-02-11 21:21:35,846 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-11 16:22:45] 2026-02-11 21:21:35,846 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-11 16:22:45] 2026-02-11 21:21:35,846 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-11 16:22:45] 2026-02-11 21:21:35,847 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-11 16:22:45] 2026-02-11 21:21:35,847 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-11 16:22:45] 2026-02-11 21:21:35,847 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-11 16:22:45] 2026-02-11 21:21:35,847 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-11 16:22:45] 2026-02-11 21:21:35,847 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-11 16:22:45] 2026-02-11 21:21:35,847 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-11 16:22:45] 2026-02-11 21:21:35,847 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-11 16:22:45] 2026-02-11 21:21:35,847 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-11 16:22:45] 2026-02-11 21:21:35,847 | INFO     | job 7000475948 has completed (purged errors)
[2026-02-11 16:22:45] 2026-02-11 21:21:35,847 | INFO     | overall cleanup function is called
[2026-02-11 16:22:45] 2026-02-11 21:21:36,868 | INFO     | --- collectZombieJob: --- 10, [1630056]
[2026-02-11 16:22:45] 2026-02-11 21:21:36,869 | INFO     | zombie collector waiting for pid 1630056
[2026-02-11 16:22:45] 2026-02-11 21:21:36,869 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-11 16:22:45] 2026-02-11 21:21:36,869 | INFO     | collected zombie processes
[2026-02-11 16:22:45] 2026-02-11 21:21:36,869 | INFO     | will attempt to kill all subprocesses of pid=1630056
[2026-02-11 16:22:45] 2026-02-11 21:21:37,212 | INFO     | number of running child processes to parent process 1630056: 1
[2026-02-11 16:22:45] 2026-02-11 21:21:37,212 | INFO     | maximum number of monitored processes: 6
[2026-02-11 16:22:45] 2026-02-11 21:21:37,212 | INFO     | aborting job monitoring since job object (job id=7000475948) has expired
[2026-02-11 16:22:45] 2026-02-11 21:21:38,418 | INFO     | process IDs to be killed: [1630056] (in reverse order)
[2026-02-11 16:22:45] 2026-02-11 21:21:39,358 | WARNING  | found no corresponding commands to process id(s)
[2026-02-11 16:22:45] 2026-02-11 21:21:39,358 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-11 16:22:45] 2026-02-11 21:21:39,384 | INFO     | did not find any defunct processes belonging to 1630056
[2026-02-11 16:22:45] 2026-02-11 21:21:39,414 | INFO     | did not find any defunct processes belonging to 1630056
[2026-02-11 16:22:45] 2026-02-11 21:21:39,414 | INFO     | ready for new job
[2026-02-11 16:22:45] 2026-02-11 21:21:39,414 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-11 16:22:45] 2026-02-11 21:21:39,417 | INFO     | **************************************
[2026-02-11 16:22:45] 2026-02-11 21:21:39,417 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-11 16:22:45] 2026-02-11 21:21:39,417 | INFO     | **************************************
[2026-02-11 16:22:45] 2026-02-11 21:21:39,417 | INFO     | 
[2026-02-11 16:22:45] 2026-02-11 21:21:39,422 | INFO     | architecture information:
[2026-02-11 16:22:45] 2026-02-11 21:21:39,422 | INFO     | executing command: cat /etc/os-release
[2026-02-11 16:22:45] 2026-02-11 21:21:39,471 | INFO     | cat /etc/os-release:
[2026-02-11 16:22:45] NAME="CentOS Linux"
[2026-02-11 16:22:45] VERSION="7 (Core)"
[2026-02-11 16:22:45] ID="centos"
[2026-02-11 16:22:45] ID_LIKE="rhel fedora"
[2026-02-11 16:22:45] VERSION_ID="7"
[2026-02-11 16:22:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-11 16:22:45] ANSI_COLOR="0;31"
[2026-02-11 16:22:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-11 16:22:45] HOME_URL="https://www.centos.org/"
[2026-02-11 16:22:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-11 16:22:45] 
[2026-02-11 16:22:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-11 16:22:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-11 16:22:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-11 16:22:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-11 16:22:45] 
[2026-02-11 16:22:45] 2026-02-11 21:21:39,471 | INFO     | **************************************
[2026-02-11 16:22:45] 2026-02-11 21:21:39,975 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-02-11 16:22:45] 2026-02-11 21:21:40,075 | INFO     | sufficient remaining disk space (70295486464 B)
[2026-02-11 16:22:45] 2026-02-11 21:21:40,075 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-11 16:22:45] 2026-02-11 21:21:40,076 | INFO     | current server update state: UPDATING_FINAL
[2026-02-11 16:22:45] 2026-02-11 21:21:40,076 | INFO     | update_server=False
[2026-02-11 16:22:45] 2026-02-11 21:21:40,076 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-11 16:22:45] 2026-02-11 21:21:40,455 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-11 16:22:45] 2026-02-11 21:21:40,619 | INFO     | all payload control threads have been joined
[2026-02-11 16:22:45] 2026-02-11 21:21:40,663 | INFO     | all data control threads have been joined
[2026-02-11 16:22:45] 2026-02-11 21:21:40,722 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-11 16:22:45] 2026-02-11 21:21:40,727 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-11 16:22:45] 2026-02-11 21:21:40,728 | INFO     | aborting loop
[2026-02-11 16:22:45] 2026-02-11 21:21:40,811 | INFO     | all job control threads have been joined
[2026-02-11 16:22:45] 2026-02-11 21:21:40,845 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-11 16:22:45] 2026-02-11 21:21:41,082 | INFO     | [job] retrieve thread has finished
[2026-02-11 16:22:45] 2026-02-11 21:21:41,352 | INFO     | [payload] execute_payloads thread has finished
[2026-02-11 16:22:45] 2026-02-11 21:21:41,352 | INFO     | [data] copytool_in thread has finished
[2026-02-11 16:22:45] 2026-02-11 21:21:41,483 | INFO     | [job] queue monitor thread has finished
[2026-02-11 16:22:45] 2026-02-11 21:21:41,625 | INFO     | [payload] control thread has finished
[2026-02-11 16:22:45] 2026-02-11 21:21:41,670 | INFO     | [data] control thread has finished
[2026-02-11 16:22:45] 2026-02-11 21:21:41,688 | INFO     | [payload] validate_post thread has finished
[2026-02-11 16:22:45] 2026-02-11 21:21:41,734 | INFO     | [job] job monitor thread has finished
[2026-02-11 16:22:45] 2026-02-11 21:21:41,804 | INFO     | [payload] validate_pre thread has finished
[2026-02-11 16:22:45] 2026-02-11 21:21:41,818 | INFO     | [job] control thread has finished
[2026-02-11 16:22:45] 2026-02-11 21:21:41,944 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-11 16:22:45] 2026-02-11 21:21:42,098 | INFO     | [job] validate thread has finished
[2026-02-11 16:22:45] 2026-02-11 21:21:42,098 | INFO     | [job] create_data_payload thread has finished
[2026-02-11 16:22:45] 2026-02-11 21:21:42,535 | INFO     | [payload] failed_post thread has finished
[2026-02-11 16:22:45] 2026-02-11 21:21:42,730 | INFO     | [data] copytool_out thread has finished
[2026-02-11 16:22:45] 2026-02-11 21:21:44,854 | INFO     | [data] queue_monitor thread has finished
[2026-02-11 16:22:45] 2026-02-11 21:22:10,505 | INFO     | PID=1617793 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-11 16:22:45] 2026-02-11 21:22:10,505 | INFO     | .. there are 63 such processes running
[2026-02-11 16:22:45] 2026-02-11 21:22:10,506 | INFO     | found 0 job(s) in 20 queues
[2026-02-11 16:22:45] 2026-02-11 21:22:10,506 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-11 16:22:45] 2026-02-11 21:22:10,506 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-11 16:22:45] 2026-02-11 21:22:37,630 | INFO     | [monitor] cgroup control has ended
[2026-02-11 16:22:45] 2026-02-11 21:22:39,391 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139832893450048)>', '<ExcThread(monitor, started 139832172992256)>']
[2026-02-11 16:22:45] 2026-02-11 21:22:39,691 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-11 16:22:45] 2026-02-11 21:22:39,692 | INFO     | [monitor] control thread has ended
[2026-02-11 16:22:45] 2026-02-11 21:22:44,416 | INFO     | all workflow threads have been joined
[2026-02-11 16:22:45] 2026-02-11 21:22:44,417 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-11 16:22:45] 2026-02-11 21:22:44,417 | INFO     | traces error code: 0
[2026-02-11 16:22:45] 2026-02-11 21:22:44,417 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-11 16:22:45] 2026-02-11 21:22:44,560 [wrapper] ==== pilot stdout END ====
[2026-02-11 16:22:45] 2026-02-11 21:22:44,578 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-11 16:22:45] 2026-02-11 21:22:44,627 [wrapper] pilotpid: 1617793
[2026-02-11 16:22:45] 2026-02-11 21:22:44,685 [wrapper] Pilot exit status: 0
[2026-02-11 16:22:45] 2026-02-11 21:22:44,770 [wrapper] pandaids: 7000475948 7000475948
[2026-02-11 16:22:45] 2026-02-11 21:22:45,348 [wrapper] cleanup supervisor_pilot 3904991 1617794
[2026-02-11 16:22:45] 2026-02-11 21:22:45,356 [wrapper] Test setup, not cleaning
[2026-02-11 16:22:45] 2026-02-11 21:22:45,368 [wrapper] apfmon messages muted
[2026-02-11 16:22:45] 2026-02-11 21:22:45,372 [wrapper] ==== wrapper stdout END ====
[2026-02-11 16:22:45] 2026-02-11 21:22:45,375 [wrapper] ==== wrapper stderr END ====
[2026-02-11 16:22:45]  *** Error codes and diagnostics ***
[2026-02-11 16:22:45]     "exeErrorCode": 0,
[2026-02-11 16:22:45]     "exeErrorDiag": "",
[2026-02-11 16:22:45]     "pilotErrorCode": 0,
[2026-02-11 16:22:45]     "pilotErrorDiag": "",
[2026-02-11 16:22:45]  *** Listing of results directory ***
[2026-02-11 16:22:45] total 1156180
[2026-02-11 16:22:45] drwx------. 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-02-11 16:22:45] -rw-r--r--. 1 boincer umatlas    584422 Feb  3 18:41 pilot3.tar.gz
[2026-02-11 16:22:45] -rwx------. 1 boincer umatlas     36322 Feb  3 18:44 runpilot2-wrapper.sh
[2026-02-11 16:22:45] -rw-r--r--. 1 boincer umatlas      5111 Feb  3 18:47 queuedata.json
[2026-02-11 16:22:45] -rw-r--r--. 1 boincer umatlas       100 Feb 11 05:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-11 16:22:45] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 11 05:22 run_atlas
[2026-02-11 16:22:45] -rw-r--r--. 1 boincer umatlas       105 Feb 11 05:22 job.xml
[2026-02-11 16:22:45] -rw-r--r--. 3 boincer umatlas 493919613 Feb 11 05:22 EVNT.48317889._000270.pool.root.1
[2026-02-11 16:22:45] -rw-r--r--. 3 boincer umatlas 493919613 Feb 11 05:22 ATLAS.root_0
[2026-02-11 16:22:45] -rw-r--r--. 2 boincer umatlas    597749 Feb 11 05:22 input.tar.gz
[2026-02-11 16:22:45] drwxrwx--x. 2 boincer umatlas      4096 Feb 11 05:22 shared
[2026-02-11 16:22:45] -rw-r--r--. 2 boincer umatlas     15845 Feb 11 05:22 start_atlas.sh
[2026-02-11 16:22:45] -rw-r--r--. 1 boincer umatlas         0 Feb 11 05:22 boinc_lockfile
[2026-02-11 16:22:45] -rw-r--r--. 1 boincer umatlas      2523 Feb 11 08:11 pandaJob.out
[2026-02-11 16:22:45] -rw-------. 1 boincer umatlas        57 Feb 11 08:11 setup.sh.local
[2026-02-11 16:22:45] -rw-------. 1 boincer umatlas   1009255 Feb 11 08:11 agis_schedconf.cvmfs.json
[2026-02-11 16:22:45] -rw-------. 1 boincer umatlas       429 Feb 11 08:11 workernode_map.json
[2026-02-11 16:22:45] -rw-------. 1 boincer umatlas 183574907 Feb 11 16:20 HITS.48317892._014098.pool.root.1
[2026-02-11 16:22:45] -rw-r--r--. 1 boincer umatlas       531 Feb 11 16:20 boinc_task_state.xml
[2026-02-11 16:22:45] -rw-------. 1 boincer umatlas      1045 Feb 11 16:21 memory_monitor_summary.json
[2026-02-11 16:22:45] -rw-------. 1 boincer umatlas   1512955 Feb 11 16:21 agis_ddmendpoints.agis.ALL.json
[2026-02-11 16:22:45] -rw-------. 1 boincer umatlas    644389 Feb 11 16:21 log.48317892._014098.job.log.tgz.1
[2026-02-11 16:22:45] -rw-------. 1 boincer umatlas      6350 Feb 11 16:21 heartbeat.json
[2026-02-11 16:22:45] -rw-------. 1 boincer umatlas        96 Feb 11 16:22 pilot_heartbeat.json
[2026-02-11 16:22:45] -rw-r--r--. 1 boincer umatlas      6946 Feb 11 16:22 init_data.xml
[2026-02-11 16:22:45] -rw-r--r--. 1 boincer umatlas      8192 Feb 11 16:22 boinc_mmap_file
[2026-02-11 16:22:45] -rw-r--r--. 1 boincer umatlas        28 Feb 11 16:22 wrapper_checkpoint.txt
[2026-02-11 16:22:45] -rw-------. 1 boincer umatlas      4820 Feb 11 16:22 pilotlog.txt
[2026-02-11 16:22:45] -rw-------. 1 boincer umatlas   3635038 Feb 11 16:22 log.48317892._014098.job.log.1
[2026-02-11 16:22:45] -rw-------. 1 boincer umatlas       357 Feb 11 16:22 output.list
[2026-02-11 16:22:45] -rw-r--r--. 1 boincer umatlas       620 Feb 11 16:22 runtime_log
[2026-02-11 16:22:45] -rw-------. 1 boincer umatlas   4300800 Feb 11 16:22 result.tar.gz
[2026-02-11 16:22:45] -rw-r--r--. 1 boincer umatlas      9422 Feb 11 16:22 runtime_log.err
[2026-02-11 16:22:45] -rw-------. 1 boincer umatlas       784 Feb 11 16:22 ddFMDmfFf78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmsDWKDmRbotnn.diag
[2026-02-11 16:22:45] -rw-r--r--. 1 boincer umatlas     23437 Feb 11 16:22 stderr.txt
[2026-02-11 16:22:45] HITS file was successfully produced:
[2026-02-11 16:22:45] -rw-------. 1 boincer umatlas 183574907 Feb 11 16:20 shared/HITS.pool.root.1
[2026-02-11 16:22:45]  *** Contents of shared directory: ***
[2026-02-11 16:22:45] total 666428
[2026-02-11 16:22:45] -rw-r--r--. 3 boincer umatlas 493919613 Feb 11 05:22 ATLAS.root_0
[2026-02-11 16:22:45] -rw-r--r--. 2 boincer umatlas    597749 Feb 11 05:22 input.tar.gz
[2026-02-11 16:22:45] -rw-r--r--. 2 boincer umatlas     15845 Feb 11 05:22 start_atlas.sh
[2026-02-11 16:22:45] -rw-------. 1 boincer umatlas 183574907 Feb 11 16:20 HITS.pool.root.1
[2026-02-11 16:22:45] -rw-------. 1 boincer umatlas   4300800 Feb 11 16:22 result.tar.gz
16:22:47 (1599472): run_atlas exited; CPU time 36867.301859
16:22:47 (1599472): called boinc_finish(0)

</stderr_txt>
]]>

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