Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:57:28 (15538): wrapper (7.7.26015): starting
20:57:28 (15538): wrapper: running run_atlas (--nthreads 8)
[2026-02-11 20:57:28] Arguments: --nthreads 8
[2026-02-11 20:57:28] Threads: 8
[2026-02-11 20:57:28] Checking for CVMFS
[2026-02-11 20:57:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 20:57:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 20:57:28] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 20:57:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 20:57:29] 2.11.2.0 13917 83367 136212 156127 3 140 19503827 25165824 646 130560 0 28292673 99.839 20014840 3750 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-11 20:57:29] CVMFS is ok
[2026-02-11 20:57:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 20:57:29] Checking for apptainer binary...
[2026-02-11 20:57:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-11 20:57:29] Running /usr/bin/apptainer --version
[2026-02-11 20:57:29] apptainer version 1.3.2-1.el7
[2026-02-11 20:57:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 20:57:31] cg-vwn371.simple-grid.lan
[2026-02-11 20:57:31] apptainer works
[2026-02-11 20:57:31] Set ATHENA_PROC_NUMBER=8
[2026-02-11 20:57:31] Set ATHENA_CORE_NUMBER=8
[2026-02-11 20:57:31] Starting ATLAS job with PandaID=7008402112
[2026-02-11 20:57:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 01:06:34]  *** The last 200 lines of the pilot log: ***
[2026-02-12 01:06:34] 2026-02-12 00:05:33,637 | INFO     | log transfer has been attempted: DONE
[2026-02-12 01:06:34] 2026-02-12 00:05:33,637 | INFO     | job 7008402112 has finished - writing final server update
[2026-02-12 01:06:34] 2026-02-12 00:05:33,638 | INFO     | total number of processed events: 400 (read)
[2026-02-12 01:06:34] 2026-02-12 00:05:33,640 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7008402112/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 01:06:34] 2026-02-12 00:05:33,641 | INFO     | extracted standard info from prmon json
[2026-02-12 01:06:34] 2026-02-12 00:05:33,641 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 01:06:34] 2026-02-12 00:05:33,641 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 01:06:34] 2026-02-12 00:05:33,641 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 01:06:34] 2026-02-12 00:05:33,641 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 01:06:34] 2026-02-12 00:05:33,647 | INFO     | fitting pss+swap vs Time
[2026-02-12 01:06:34] 2026-02-12 00:05:33,648 | INFO     | sum of square deviations: 4449292298.995921
[2026-02-12 01:06:34] 2026-02-12 00:05:33,650 | INFO     | sum of deviations: 11300376596.04528
[2026-02-12 01:06:34] 2026-02-12 00:05:33,650 | INFO     | mean x: 1770847281.0041153
[2026-02-12 01:06:34] 2026-02-12 00:05:33,650 | INFO     | mean y: 2481979.9547325103
[2026-02-12 01:06:34] 2026-02-12 00:05:33,651 | INFO     | intersect: -4495141422.748051
[2026-02-12 01:06:34] 2026-02-12 00:05:33,651 | INFO     | chi2: 2.3743920456434036
[2026-02-12 01:06:34] 2026-02-12 00:05:33,652 | INFO     | sum of square deviations: 4180255001.4958158
[2026-02-12 01:06:34] 2026-02-12 00:05:33,654 | INFO     | sum of deviations: 27484681400.277355
[2026-02-12 01:06:34] 2026-02-12 00:05:33,654 | INFO     | mean x: 1770847128.5042017
[2026-02-12 01:06:34] 2026-02-12 00:05:33,654 | INFO     | mean y: 2490995.722689076
[2026-02-12 01:06:34] 2026-02-12 00:05:33,654 | INFO     | intersect: -11640619082.040043
[2026-02-12 01:06:34] 2026-02-12 00:05:33,655 | INFO     | chi2: 1.5443119446498648
[2026-02-12 01:06:34] 2026-02-12 00:05:33,655 | INFO     | current chi2=1.5443119446498648 (change=34.95969010326628 %)
[2026-02-12 01:06:34] 2026-02-12 00:05:33,655 | INFO     | sum of square deviations: 3922287678.99571
[2026-02-12 01:06:34] 2026-02-12 00:05:33,662 | INFO     | sum of deviations: 26661776331.815468
[2026-02-12 01:06:34] 2026-02-12 00:05:33,662 | INFO     | mean x: 1770846976.0042918
[2026-02-12 01:06:34] 2026-02-12 00:05:33,662 | INFO     | mean y: 2490509.1845493563
[2026-02-12 01:06:34] 2026-02-12 00:05:33,662 | INFO     | intersect: -12034853473.750229
[2026-02-12 01:06:34] 2026-02-12 00:05:33,663 | INFO     | chi2: 1.5450801133749577
[2026-02-12 01:06:34] 2026-02-12 00:05:33,663 | INFO     | current chi2=1.5450801133749577 (change=-0.04974181076265985 %)
[2026-02-12 01:06:34] 2026-02-12 00:05:33,663 | INFO     | right removable region: 232
[2026-02-12 01:06:34] 2026-02-12 00:05:33,664 | INFO     | sum of square deviations: 4180254391.4958158
[2026-02-12 01:06:34] 2026-02-12 00:05:33,666 | INFO     | sum of deviations: -25419379884.37816
[2026-02-12 01:06:34] 2026-02-12 00:05:33,666 | INFO     | mean x: 1770847433.5042017
[2026-02-12 01:06:34] 2026-02-12 00:05:33,666 | INFO     | mean y: 2502597.3781512603
[2026-02-12 01:06:34] 2026-02-12 00:05:33,666 | INFO     | intersect: 10770709365.151474
[2026-02-12 01:06:34] 2026-02-12 00:05:33,667 | INFO     | chi2: 0.9418806141852036
[2026-02-12 01:06:34] 2026-02-12 00:05:33,667 | INFO     | current chi2=0.9418806141852036 (change=60.33171455769527 %)
[2026-02-12 01:06:34] 2026-02-12 00:05:33,667 | INFO     | sum of square deviations: 3922286458.99571
[2026-02-12 01:06:34] 2026-02-12 00:05:33,669 | INFO     | sum of deviations: -23276949640.287548
[2026-02-12 01:06:34] 2026-02-12 00:05:33,670 | INFO     | mean x: 1770847586.0042918
[2026-02-12 01:06:34] 2026-02-12 00:05:33,670 | INFO     | mean y: 2501299.287553648
[2026-02-12 01:06:34] 2026-02-12 00:05:33,670 | INFO     | intersect: 10511659799.302088
[2026-02-12 01:06:34] 2026-02-12 00:05:33,670 | INFO     | chi2: 0.9282914376186526
[2026-02-12 01:06:34] 2026-02-12 00:05:33,671 | INFO     | current chi2=0.9282914376186526 (change=1.4427705976629162 %)
[2026-02-12 01:06:34] 2026-02-12 00:05:33,671 | INFO     | left removable region: 20
[2026-02-12 01:06:34] 2026-02-12 00:05:33,671 | INFO     | sum of square deviations: 2954458140.9952765
[2026-02-12 01:06:34] 2026-02-12 00:05:33,673 | INFO     | sum of deviations: 6316504264.127358
[2026-02-12 01:06:34] 2026-02-12 00:05:33,673 | INFO     | mean x: 1770847555.5047169
[2026-02-12 01:06:34] 2026-02-12 00:05:33,674 | INFO     | mean y: 2501720.3726415094
[2026-02-12 01:06:34] 2026-02-12 00:05:33,674 | INFO     | intersect: -3783494087.2027335
[2026-02-12 01:06:34] 2026-02-12 00:05:33,674 | INFO     | chi2: 0.0006343711554919101
[2026-02-12 01:06:34] 2026-02-12 00:05:33,674 | INFO     | current memory leak: 2.14 B/s (using 212 data points, chi2=0.00)
[2026-02-12 01:06:34] 2026-02-12 00:05:33,675 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-02-12 01:06:34] 2026-02-12 00:05:33,675 | INFO     | ..............................
[2026-02-12 01:06:34] 2026-02-12 00:05:33,675 | INFO     | . Timing measurements:
[2026-02-12 01:06:34] 2026-02-12 00:05:33,675 | INFO     | . get job = 0 s
[2026-02-12 01:06:34] 2026-02-12 00:05:33,676 | INFO     | . initial setup = 9 s
[2026-02-12 01:06:34] 2026-02-12 00:05:33,676 | INFO     | . payload setup = 10 s
[2026-02-12 01:06:34] 2026-02-12 00:05:33,676 | INFO     | . stage-in = 0 s
[2026-02-12 01:06:34] 2026-02-12 00:05:33,676 | INFO     | . payload execution = 14831 s
[2026-02-12 01:06:34] 2026-02-12 00:05:33,676 | INFO     | . stage-out = 4 s
[2026-02-12 01:06:34] 2026-02-12 00:05:33,676 | INFO     | . log creation = 1 s
[2026-02-12 01:06:34] 2026-02-12 00:05:33,676 | INFO     | ..............................
[2026-02-12 01:06:34] 2026-02-12 00:05:33,807 | INFO     | 
[2026-02-12 01:06:34] 2026-02-12 00:05:33,807 | INFO     | job summary report
[2026-02-12 01:06:34] 2026-02-12 00:05:33,807 | INFO     | --------------------------------------------------
[2026-02-12 01:06:34] 2026-02-12 00:05:33,808 | INFO     | PanDA job id: 7008402112
[2026-02-12 01:06:34] 2026-02-12 00:05:33,808 | INFO     | task id: 48442031
[2026-02-12 01:06:34] 2026-02-12 00:05:33,808 | INFO     | errors: (none)
[2026-02-12 01:06:34] 2026-02-12 00:05:33,808 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 01:06:34] 2026-02-12 00:05:33,808 | INFO     | pilot state: finished 
[2026-02-12 01:06:34] 2026-02-12 00:05:33,808 | INFO     | transexitcode: 0
[2026-02-12 01:06:34] 2026-02-12 00:05:33,808 | INFO     | exeerrorcode: 0
[2026-02-12 01:06:34] 2026-02-12 00:05:33,808 | INFO     | exeerrordiag: 
[2026-02-12 01:06:34] 2026-02-12 00:05:33,808 | INFO     | exitcode: 0
[2026-02-12 01:06:34] 2026-02-12 00:05:33,809 | INFO     | exitmsg: OK
[2026-02-12 01:06:34] 2026-02-12 00:05:33,809 | INFO     | cpuconsumptiontime: 55923 s
[2026-02-12 01:06:34] 2026-02-12 00:05:33,809 | INFO     | nevents: 400
[2026-02-12 01:06:34] 2026-02-12 00:05:33,809 | INFO     | neventsw: 0
[2026-02-12 01:06:34] 2026-02-12 00:05:33,815 | INFO     | pid: 23670
[2026-02-12 01:06:34] 2026-02-12 00:05:33,815 | INFO     | pgrp: 23670
[2026-02-12 01:06:34] 2026-02-12 00:05:33,815 | INFO     | corecount: 8
[2026-02-12 01:06:34] 2026-02-12 00:05:33,815 | INFO     | event service: False
[2026-02-12 01:06:34] 2026-02-12 00:05:33,816 | INFO     | sizes: {0: 2281741, 1: 2282202, 14846: 2313051, 14852: 2322049, 14853: 2322105, 14854: 2322299}
[2026-02-12 01:06:34] 2026-02-12 00:05:33,816 | INFO     | --------------------------------------------------
[2026-02-12 01:06:34] 2026-02-12 00:05:33,816 | INFO     | 
[2026-02-12 01:06:34] 2026-02-12 00:05:33,816 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-02-12 01:06:34] 2026-02-12 00:05:34,168 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 01:06:34] 2026-02-12 00:05:34,169 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 01:06:34] 2026-02-12 00:05:34,169 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 01:06:34] 2026-02-12 00:05:34,169 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 01:06:34] 2026-02-12 00:05:34,169 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 01:06:34] 2026-02-12 00:05:34,169 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 01:06:34] 2026-02-12 00:05:34,169 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 01:06:34] 2026-02-12 00:05:34,170 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 01:06:34] 2026-02-12 00:05:34,170 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 01:06:34] 2026-02-12 00:05:34,170 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 01:06:34] 2026-02-12 00:05:34,170 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 01:06:34] 2026-02-12 00:05:34,170 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 01:06:34] 2026-02-12 00:05:34,170 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 01:06:34] 2026-02-12 00:05:34,170 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 01:06:34] 2026-02-12 00:05:34,170 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 01:06:34] 2026-02-12 00:05:34,170 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 01:06:34] 2026-02-12 00:05:34,170 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 01:06:34] 2026-02-12 00:05:34,171 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 01:06:34] 2026-02-12 00:05:34,171 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 01:06:34] 2026-02-12 00:05:34,171 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 01:06:34] 2026-02-12 00:05:34,171 | INFO     | job 7008402112 has completed (purged errors)
[2026-02-12 01:06:34] 2026-02-12 00:05:34,171 | INFO     | overall cleanup function is called
[2026-02-12 01:06:34] 2026-02-12 00:05:35,179 | INFO     | --- collectZombieJob: --- 10, [23670]
[2026-02-12 01:06:34] 2026-02-12 00:05:35,179 | INFO     | zombie collector waiting for pid 23670
[2026-02-12 01:06:34] 2026-02-12 00:05:35,179 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 01:06:34] 2026-02-12 00:05:35,180 | INFO     | collected zombie processes
[2026-02-12 01:06:34] 2026-02-12 00:05:35,180 | INFO     | will attempt to kill all subprocesses of pid=23670
[2026-02-12 01:06:34] 2026-02-12 00:05:35,249 | INFO     | process IDs to be killed: [23670] (in reverse order)
[2026-02-12 01:06:34] 2026-02-12 00:05:35,769 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 01:06:34] 2026-02-12 00:05:35,769 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 01:06:34] 2026-02-12 00:05:35,771 | INFO     | did not find any defunct processes belonging to 23670
[2026-02-12 01:06:34] 2026-02-12 00:05:35,773 | INFO     | did not find any defunct processes belonging to 23670
[2026-02-12 01:06:34] 2026-02-12 00:05:35,773 | INFO     | ready for new job
[2026-02-12 01:06:34] 2026-02-12 00:05:35,773 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 01:06:34] 2026-02-12 00:05:35,775 | INFO     | **************************************
[2026-02-12 01:06:34] 2026-02-12 00:05:35,775 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 01:06:34] 2026-02-12 00:05:35,776 | INFO     | **************************************
[2026-02-12 01:06:34] 2026-02-12 00:05:35,776 | INFO     | 
[2026-02-12 01:06:34] 2026-02-12 00:05:35,776 | INFO     | pilot is running in a VM
[2026-02-12 01:06:34] 2026-02-12 00:05:35,776 | INFO     | architecture information:
[2026-02-12 01:06:34] 2026-02-12 00:05:35,784 | INFO     | executing command: cat /etc/os-release
[2026-02-12 01:06:34] 2026-02-12 00:05:35,998 | INFO     | cat /etc/os-release:
[2026-02-12 01:06:34] NAME="CentOS Linux"
[2026-02-12 01:06:34] VERSION="7 (Core)"
[2026-02-12 01:06:34] ID="centos"
[2026-02-12 01:06:34] ID_LIKE="rhel fedora"
[2026-02-12 01:06:34] VERSION_ID="7"
[2026-02-12 01:06:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 01:06:34] ANSI_COLOR="0;31"
[2026-02-12 01:06:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 01:06:34] HOME_URL="https://www.centos.org/"
[2026-02-12 01:06:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 01:06:34] 
[2026-02-12 01:06:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 01:06:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 01:06:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 01:06:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 01:06:34] 
[2026-02-12 01:06:34] 2026-02-12 00:05:35,999 | INFO     | **************************************
[2026-02-12 01:06:34] 2026-02-12 00:05:36,502 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-02-12 01:06:34] 2026-02-12 00:05:36,811 | INFO     | sufficient remaining disk space (495214133248 B)
[2026-02-12 01:06:34] 2026-02-12 00:05:36,811 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 01:06:34] 2026-02-12 00:05:36,811 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 01:06:34] 2026-02-12 00:05:36,811 | INFO     | update_server=False
[2026-02-12 01:06:34] 2026-02-12 00:05:36,811 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 01:06:34] 2026-02-12 00:05:36,814 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 01:06:34] 2026-02-12 00:05:36,814 | INFO     | aborting loop
[2026-02-12 01:06:34] 2026-02-12 00:05:36,972 | INFO     | all job control threads have been joined
[2026-02-12 01:06:34] 2026-02-12 00:05:37,050 | INFO     | all data control threads have been joined
[2026-02-12 01:06:34] 2026-02-12 00:05:37,234 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 01:06:34] 2026-02-12 00:05:37,696 | INFO     | all payload control threads have been joined
[2026-02-12 01:06:34] 2026-02-12 00:05:37,817 | INFO     | [job] retrieve thread has finished
[2026-02-12 01:06:34] 2026-02-12 00:05:37,820 | INFO     | [job] job monitor thread has finished
[2026-02-12 01:06:34] 2026-02-12 00:05:37,886 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 01:06:34] 2026-02-12 00:05:37,919 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 01:06:34] 2026-02-12 00:05:37,961 | INFO     | [job] validate thread has finished
[2026-02-12 01:06:34] 2026-02-12 00:05:37,978 | INFO     | [job] control thread has finished
[2026-02-12 01:06:34] 2026-02-12 00:05:38,029 | INFO     | [payload] failed_post thread has finished
[2026-02-12 01:06:34] 2026-02-12 00:05:38,056 | INFO     | [data] control thread has finished
[2026-02-12 01:06:34] 2026-02-12 00:05:38,064 | INFO     | [payload] validate_post thread has finished
[2026-02-12 01:06:34] 2026-02-12 00:05:38,609 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 01:06:34] 2026-02-12 00:05:38,702 | INFO     | [payload] control thread has finished
[2026-02-12 01:06:34] 2026-02-12 00:05:38,809 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 01:06:34] 2026-02-12 00:05:38,823 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 01:06:34] 2026-02-12 00:05:39,086 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 01:06:34] 2026-02-12 00:05:39,240 | INFO     | [data] copytool_out thread has finished
[2026-02-12 01:06:34] 2026-02-12 00:05:39,303 | INFO     | [data] copytool_in thread has finished
[2026-02-12 01:06:34] 2026-02-12 00:05:39,829 | INFO     | [job] queue monitor thread has finished
[2026-02-12 01:06:34] 2026-02-12 00:05:42,818 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 01:06:34] 2026-02-12 00:06:05,687 | INFO     | PID=19254 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-12 01:06:34] 2026-02-12 00:06:05,687 | INFO     | .. there are 2 such processes running
[2026-02-12 01:06:34] 2026-02-12 00:06:05,688 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 01:06:34] 2026-02-12 00:06:05,689 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 01:06:34] 2026-02-12 00:06:05,689 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 01:06:34] 2026-02-12 00:06:23,944 | INFO     | [monitor] cgroup control has ended
[2026-02-12 01:06:34] 2026-02-12 00:06:23,956 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139965490624320)>', '<ExcThread(monitor, started 139964922717952)>']
[2026-02-12 01:06:34] 2026-02-12 00:06:24,801 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 01:06:34] 2026-02-12 00:06:24,801 | INFO     | [monitor] control thread has ended
[2026-02-12 01:06:34] 2026-02-12 00:06:28,982 | INFO     | all workflow threads have been joined
[2026-02-12 01:06:34] 2026-02-12 00:06:28,982 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 01:06:34] 2026-02-12 00:06:28,982 | INFO     | traces error code: 0
[2026-02-12 01:06:34] 2026-02-12 00:06:28,983 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 01:06:34] 2026-02-12 00:06:29,365 [wrapper] ==== pilot stdout END ====
[2026-02-12 01:06:34] 2026-02-12 00:06:29,458 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 01:06:34] 2026-02-12 00:06:29,564 [wrapper] pilotpid: 19254
[2026-02-12 01:06:34] 2026-02-12 00:06:29,680 [wrapper] Pilot exit status: 0
[2026-02-12 01:06:34] 2026-02-12 00:06:30,140 [wrapper] pandaids: 7008402112
[2026-02-12 01:06:34] 2026-02-12 00:06:31,130 [wrapper] cleanup supervisor_pilot 30578 19255
[2026-02-12 01:06:34] 2026-02-12 00:06:31,226 [wrapper] Test setup, not cleaning
[2026-02-12 01:06:34] 2026-02-12 00:06:31,354 [wrapper] apfmon messages muted
[2026-02-12 01:06:34] 2026-02-12 00:06:31,430 [wrapper] ==== wrapper stdout END ====
[2026-02-12 01:06:34] 2026-02-12 00:06:31,540 [wrapper] ==== wrapper stderr END ====
[2026-02-12 01:06:34]  *** Error codes and diagnostics ***
[2026-02-12 01:06:34]     "exeErrorCode": 0,
[2026-02-12 01:06:34]     "exeErrorDiag": "",
[2026-02-12 01:06:34]     "pilotErrorCode": 0,
[2026-02-12 01:06:34]     "pilotErrorDiag": "",
[2026-02-12 01:06:34]  *** Listing of results directory ***
[2026-02-12 01:06:34] total 667344
[2026-02-12 01:06:34] -rw-r--r--. 1 boinc boinc    584627 Feb 11 04:39 pilot3.tar.gz
[2026-02-12 01:06:34] -rwx------. 1 boinc boinc     36322 Feb 11 04:41 runpilot2-wrapper.sh
[2026-02-12 01:06:34] -rw-r--r--. 1 boinc boinc      5111 Feb 11 04:42 queuedata.json
[2026-02-12 01:06:34] -rw-r--r--. 1 boinc boinc       100 Feb 11 20:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 01:06:34] -rwxr-xr-x. 1 boinc boinc      7986 Feb 11 20:57 run_atlas
[2026-02-12 01:06:34] -rw-r--r--. 1 boinc boinc       105 Feb 11 20:57 job.xml
[2026-02-12 01:06:34] -rw-r--r--. 2 boinc boinc 491012882 Feb 11 20:57 EVNT.48442027._000168.pool.root.1
[2026-02-12 01:06:34] -rw-r--r--. 2 boinc boinc     15845 Feb 11 20:57 start_atlas.sh
[2026-02-12 01:06:34] drwxrwx--x. 2 boinc boinc        68 Feb 11 20:57 shared
[2026-02-12 01:06:34] -rw-r--r--. 2 boinc boinc    597966 Feb 11 20:57 input.tar.gz
[2026-02-12 01:06:34] -rw-r--r--. 1 boinc boinc      6390 Feb 11 20:57 init_data.xml
[2026-02-12 01:06:34] -rw-r--r--. 1 boinc boinc         0 Feb 11 20:57 boinc_lockfile
[2026-02-12 01:06:34] -rw-r--r--. 1 boinc boinc      2529 Feb 11 20:57 pandaJob.out
[2026-02-12 01:06:34] -rw-------. 1 boinc boinc   1005065 Feb 11 20:57 agis_schedconf.cvmfs.json
[2026-02-12 01:06:34] -rw-------. 1 boinc boinc       415 Feb 11 20:57 workernode_map.json
[2026-02-12 01:06:34] drwx------. 5 boinc boinc      4096 Feb 11 20:57 pilot3
[2026-02-12 01:06:34] -rw-------. 1 boinc boinc 183251838 Feb 12 01:04 HITS.48442031._009714.pool.root.1
[2026-02-12 01:06:34] -rw-r--r--. 1 boinc boinc       531 Feb 12 01:04 boinc_task_state.xml
[2026-02-12 01:06:34] -rw-------. 1 boinc boinc      1017 Feb 12 01:05 memory_monitor_summary.json
[2026-02-12 01:06:34] -rw-------. 1 boinc boinc   1512955 Feb 12 01:05 agis_ddmendpoints.agis.ALL.json
[2026-02-12 01:06:34] -rw-------. 1 boinc boinc    503815 Feb 12 01:05 log.48442031._009714.job.log.tgz.1
[2026-02-12 01:06:34] -rw-------. 1 boinc boinc      6313 Feb 12 01:05 heartbeat.json
[2026-02-12 01:06:34] -rw-------. 1 boinc boinc        95 Feb 12 01:06 pilot_heartbeat.json
[2026-02-12 01:06:34] -rw-r--r--. 1 boinc boinc      8192 Feb 12 01:06 boinc_mmap_file
[2026-02-12 01:06:34] -rw-r--r--. 1 boinc boinc        28 Feb 12 01:06 wrapper_checkpoint.txt
[2026-02-12 01:06:34] -rw-------. 1 boinc boinc      4880 Feb 12 01:06 pilotlog.txt
[2026-02-12 01:06:34] -rw-------. 1 boinc boinc   2081386 Feb 12 01:06 log.48442031._009714.job.log.1
[2026-02-12 01:06:34] -rw-------. 1 boinc boinc       357 Feb 12 01:06 output.list
[2026-02-12 01:06:34] -rw-r--r--. 1 boinc boinc       620 Feb 12 01:06 runtime_log
[2026-02-12 01:06:34] -rw-------. 1 boinc boinc   2600960 Feb 12 01:06 result.tar.gz
[2026-02-12 01:06:34] -rw-r--r--. 1 boinc boinc      8816 Feb 12 01:06 runtime_log.err
[2026-02-12 01:06:34] -rw-------. 1 boinc boinc       655 Feb 12 01:06 Bn3NDmTHGA9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm7UjKDmM80wpn.diag
[2026-02-12 01:06:34] -rw-r--r--. 1 boinc boinc     20767 Feb 12 01:06 stderr.txt
[2026-02-12 01:06:34] HITS file was successfully produced:
[2026-02-12 01:06:35] -rw-------. 1 boinc boinc 183251838 Feb 12 01:04 shared/HITS.pool.root.1
[2026-02-12 01:06:35]  *** Contents of shared directory: ***
[2026-02-12 01:06:35] total 661608
[2026-02-12 01:06:35] -rw-r--r--. 2 boinc boinc 491012882 Feb 11 20:57 ATLAS.root_0
[2026-02-12 01:06:35] -rw-r--r--. 2 boinc boinc     15845 Feb 11 20:57 start_atlas.sh
[2026-02-12 01:06:35] -rw-r--r--. 2 boinc boinc    597966 Feb 11 20:57 input.tar.gz
[2026-02-12 01:06:35] -rw-------. 1 boinc boinc 183251838 Feb 12 01:04 HITS.pool.root.1
[2026-02-12 01:06:35] -rw-------. 1 boinc boinc   2600960 Feb 12 01:06 result.tar.gz
01:06:36 (15538): run_atlas exited; CPU time 56075.809248
01:06:36 (15538): called boinc_finish(0)

</stderr_txt>
]]>

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