Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-11 18:37:24 (15356): vboxwrapper version 26210
2026-02-11 18:37:24 (15356): BOINC client version: 8.2.8
2026-02-11 18:37:25 (15356): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-02-11 18:37:25 (15356): Successfully copied 'init_data.xml' to the shared directory.
2026-02-11 18:37:25 (15356): Create VM. (boinc_2446336c68cf32d9, slot#2)
2026-02-11 18:37:26 (15356): Setting Memory Size for VM. (4800MB)
2026-02-11 18:37:26 (15356): Setting CPU Count for VM. (8)
2026-02-11 18:37:26 (15356): Setting Chipset Options for VM.
2026-02-11 18:37:26 (15356): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-11 18:37:27 (15356): Setting Boot Options for VM.
2026-02-11 18:37:27 (15356): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-11 18:37:27 (15356): Enabling VM Network Access.
2026-02-11 18:37:28 (15356): Disabling USB Support for VM.
2026-02-11 18:37:28 (15356): Disabling COM Port Support for VM.
2026-02-11 18:37:28 (15356): Disabling LPT Port Support for VM.
2026-02-11 18:37:28 (15356): Disabling Audio Support for VM.
2026-02-11 18:37:29 (15356): Disabling Clipboard Support for VM.
2026-02-11 18:37:29 (15356): Disabling Drag and Drop Support for VM.
2026-02-11 18:37:29 (15356): Adding storage controller(s) to VM.
2026-02-11 18:37:29 (15356): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-11 18:37:30 (15356): Adding VirtualBox Guest Additions to VM.
2026-02-11 18:37:30 (15356): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-11 18:37:30 (15356): forwarding host port 54929 to guest port 80
2026-02-11 18:37:31 (15356): Enabling remote desktop for VM.
2026-02-11 18:37:31 (15356): Required extension pack not installed, remote desktop not enabled.
2026-02-11 18:37:31 (15356): Enabling shared directory for VM.
2026-02-11 18:37:31 (15356): Starting VM using VBoxManage interface. (boinc_2446336c68cf32d9, slot#2)
2026-02-11 18:37:36 (15356): Successfully started VM. (PID = '6848')
2026-02-11 18:37:36 (15356): Reporting VM Process ID to BOINC.
2026-02-11 18:37:36 (15356): Guest Log: BIOS: VirtualBox 7.2.6
2026-02-11 18:37:36 (15356): Guest Log: CPUID EDX: 0x178bfbff
2026-02-11 18:37:36 (15356): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-11 18:37:36 (15356): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-11 18:37:36 (15356): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-11 18:37:36 (15356): Detected: Web Application Enabled (http://localhost:54929)
2026-02-11 18:37:36 (15356): Preference change detected
2026-02-11 18:37:36 (15356): Setting CPU throttle for VM. (100%)
2026-02-11 18:37:36 (15356): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-11 18:37:38 (15356): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-11 18:37:38 (15356): Guest Log: BIOS: Booting from Hard Disk...
2026-02-11 18:37:41 (15356): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-11 18:37:41 (15356): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-11 18:37:41 (15356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-11 18:37:45 (15356): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-11 18:37:45 (15356): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-11 18:37:49 (15356): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-11 18:37:49 (15356): Guest Log: 00:00:00.000099 main     Log opened 2026-02-11T18:37:47.823733000Z
2026-02-11 18:37:49 (15356): Guest Log: 00:00:00.000167 main     OS Product: Linux
2026-02-11 18:37:49 (15356): Guest Log: 00:00:00.000187 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-11 18:37:49 (15356): Guest Log: 00:00:00.000204 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-11 18:37:49 (15356): Guest Log: 00:00:00.000219 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-11 18:37:49 (15356): Guest Log: 00:00:00.000219 main     Process ID: 1376
2026-02-11 18:37:49 (15356): Guest Log: 00:00:00.000220 main     Package type: LINUX_64BITS_GENERIC
2026-02-11 18:37:49 (15356): Guest Log: 00:00:00.000978 main     5.2.32 r132073 started. Verbose level = 0
2026-02-11 18:37:50 (15356): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-11 18:37:50 (15356): Guest Log: [INFO] Mounting shared directory
2026-02-11 18:37:50 (15356): Guest Log: [INFO] Checking for init_data.xml
2026-02-11 18:37:59 (15356): Guest Log: 00:00:10.005357 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 239 121 000ns (GuestNow=1 770 831 479 586 417 000 ns GuestLast=1 770 835 067 825 538 000 ns fSetTimeLastLoop=true )
2026-02-11 18:38:14 (15356): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-11 18:38:14 (15356): Guest Log: [INFO] Detected branch: prod
2026-02-11 18:38:14 (15356): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-11 18:38:14 (15356): Guest Log: Copying input files
2026-02-11 18:38:16 (15356): Guest Log: Copied input files into RunAtlas.
2026-02-11 18:38:16 (15356): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-11 18:38:16 (15356): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-11 18:38:16 (15356): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-11 18:38:16 (15356): Guest Log: Further information can be found at the LHC@home message board.
2026-02-11 18:38:25 (15356): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-11 18:38:25 (15356): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-11 18:38:25 (15356): Guest Log: 2.6.3.0 1675 0 30152 156124 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-11 18:38:26 (15356): Guest Log: copied the webapp to /var/www
2026-02-11 18:38:26 (15356): Guest Log: ATHENA_PROC_NUMBER=8
2026-02-11 18:38:26 (15356): Guest Log: ATHENA_CORE_NUMBER=8
2026-02-11 18:38:26 (15356): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-11 18:38:26 (15356): Guest Log:  *** Starting ATLAS job. (PandaID=7007442559 taskID=48442098) ***
2026-02-11 19:49:10 (15356): Guest Log:  *** Job finished ***
2026-02-11 19:49:10 (15356): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-11 19:49:10 (15356): Guest Log: 2026-02-11 18:48:23,472 | INFO     | [data] copytool_out thread has finished
2026-02-11 19:49:10 (15356): Guest Log: 2026-02-11 18:48:24,326 | INFO     | [data] queue_monitor thread has finished
2026-02-11 19:49:10 (15356): Guest Log: 2026-02-11 18:49:01,642 | INFO     | [monitor] cgroup control has ended
2026-02-11 19:49:10 (15356): Guest Log: 2026-02-11 18:49:01,716 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139810732132160)>', '<ExcThread(monitor, started 139809641199360)>']
2026-02-11 19:49:10 (15356): Guest Log: 2026-02-11 18:49:01,903 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-11 19:49:10 (15356): Guest Log: 2026-02-11 18:49:01,904 | INFO     | [monitor] control thread has ended
2026-02-11 19:49:10 (15356): Guest Log: 2026-02-11 18:49:06,765 | INFO     | all workflow threads have been joined
2026-02-11 19:49:10 (15356): Guest Log: 2026-02-11 18:49:06,765 | INFO     | end of generic workflow (traces error code: 0)
2026-02-11 19:49:10 (15356): Guest Log: 2026-02-11 18:49:06,765 | INFO     | traces error code: 0
2026-02-11 19:49:10 (15356): Guest Log: 2026-02-11 18:49:06,765 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-11 19:49:10 (15356): Guest Log: 2026-02-11 18:49:06,821 [wrapper] ==== pilot stdout END ====
2026-02-11 19:49:10 (15356): Guest Log: 2026-02-11 18:49:06,824 [wrapper] ==== wrapper stdout RESUME ====
2026-02-11 19:49:10 (15356): Guest Log: 2026-02-11 18:49:06,826 [wrapper] pilotpid: 6093
2026-02-11 19:49:10 (15356): Guest Log: 2026-02-11 18:49:06,828 [wrapper] Pilot exit status: 0
2026-02-11 19:49:10 (15356): Guest Log: 2026-02-11 18:49:07,313 [wrapper] pandaids: 7007442559
2026-02-11 19:49:10 (15356): Guest Log: 2026-02-11 18:49:07,332 [wrapper] cleanup supervisor_pilot 25134 6094
2026-02-11 19:49:10 (15356): Guest Log: 2026-02-11 18:49:07,334 [wrapper] Test setup, not cleaning
2026-02-11 19:49:10 (15356): Guest Log: 2026-02-11 18:49:07,336 [wrapper] apfmon messages muted
2026-02-11 19:49:10 (15356): Guest Log: 2026-02-11 18:49:07,339 [wrapper] ==== wrapper stdout END ====
2026-02-11 19:49:10 (15356): Guest Log: 2026-02-11 18:49:07,341 [wrapper] ==== wrapper stderr END ====
2026-02-11 19:49:10 (15356): Guest Log:  *** Error codes and diagnostics ***
2026-02-11 19:49:10 (15356): Guest Log:     "exeErrorCode": 0,
2026-02-11 19:49:10 (15356): Guest Log:     "exeErrorDiag": "",
2026-02-11 19:49:10 (15356): Guest Log:     "pilotErrorCode": 0,
2026-02-11 19:49:10 (15356): Guest Log:     "pilotErrorDiag": "",
2026-02-11 19:49:10 (15356): Guest Log:  *** Listing of results directory ***
2026-02-11 19:49:10 (15356): Guest Log: total 181692
2026-02-11 19:49:10 (15356): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb 10 07:15 pilot3.tar.gz
2026-02-11 19:49:10 (15356): Guest Log: -rwx------. 1 atlas atlas     36322 Feb 10 07:17 runpilot2-wrapper.sh
2026-02-11 19:49:10 (15356): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb 10 07:19 queuedata.json
2026-02-11 19:49:10 (15356): Guest Log: -rwxr-xr-x. 1 atlas atlas    597955 Feb 11 17:38 input.tar.gz
2026-02-11 19:49:10 (15356): Guest Log: -rwxr-xr-x. 1 atlas atlas      8551 Feb 11 17:38 init_data.xml
2026-02-11 19:49:10 (15356): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb 11 17:38 start_atlas.sh
2026-02-11 19:49:10 (15356): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 11 17:38 EVNT.48442096._000100.pool.root.1 -> /data/./ATLAS.root_0
2026-02-11 19:49:10 (15356): Guest Log: -rw-r--r--. 1 atlas atlas      2528 Feb 11 17:38 pandaJob.out
2026-02-11 19:49:10 (15356): Guest Log: -rw-------. 1 atlas atlas   1008160 Feb 11 17:38 agis_schedconf.cvmfs.json
2026-02-11 19:49:10 (15356): Guest Log: -rw-------. 1 atlas atlas   1512955 Feb 11 17:38 agis_ddmendpoints.agis.ALL.json
2026-02-11 19:49:10 (15356): Guest Log: -rw-------. 1 atlas atlas       431 Feb 11 17:38 workernode_map.json
2026-02-11 19:49:10 (15356): Guest Log: drwx------. 5 atlas atlas      4096 Feb 11 17:38 pilot3
2026-02-11 19:49:10 (15356): Guest Log: -rw-------. 1 atlas atlas        95 Feb 11 18:47 pilot_heartbeat.json
2026-02-11 19:49:10 (15356): Guest Log: -rw-------. 1 atlas atlas 180315296 Feb 11 18:47 HITS.48442098._005778.pool.root.1
2026-02-11 19:49:10 (15356): Guest Log: -rw-------. 1 atlas atlas      1025 Feb 11 18:48 memory_monitor_summary.json
2026-02-11 19:49:10 (15356): Guest Log: -rw-------. 1 atlas atlas    322143 Feb 11 18:48 log.48442098._005778.job.log.tgz.1
2026-02-11 19:49:10 (15356): Guest Log: -rw-------. 1 atlas atlas      6335 Feb 11 18:48 heartbeat.json
2026-02-11 19:49:10 (15356): Guest Log: -rw-------. 1 atlas atlas      4680 Feb 11 18:49 pilotlog.txt
2026-02-11 19:49:10 (15356): Guest Log: -rw-------. 1 atlas atlas    608416 Feb 11 18:49 log.48442098._005778.job.log.1
2026-02-11 19:49:10 (15356): Guest Log: -rw-------. 1 atlas atlas       357 Feb 11 18:49 output.list
2026-02-11 19:49:10 (15356): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 11 18:49 runtime_log
2026-02-11 19:49:10 (15356): Guest Log: -rw-------. 1 atlas atlas    952320 Feb 11 18:49 result.tar.gz
2026-02-11 19:49:10 (15356): Guest Log: -rw-r--r--. 1 atlas atlas      8736 Feb 11 18:49 runtime_log.err
2026-02-11 19:49:10 (15356): Guest Log: -rw-------. 1 atlas atlas       648 Feb 11 18:49 EGlMDmyAx98n9Rq4apOajLDm4fhM0noT9bVooX4SDms0gKDmMrr6en.diag
2026-02-11 19:49:10 (15356): Guest Log: Looking for outputfile HITS.48442098._005778.pool.root.1
2026-02-11 19:49:10 (15356): Guest Log: HITS file was successfully produced
2026-02-11 19:49:10 (15356): Guest Log: -rw-------. 1 atlas atlas 180315296 Feb 11 18:47 /home/atlas/RunAtlas/HITS.48442098._005778.pool.root.1
2026-02-11 19:49:11 (15356): Guest Log: Successfully finished the ATLAS job!
2026-02-11 19:49:11 (15356): Guest Log: Copying the results back to the shared directory!
2026-02-11 19:49:11 (15356): Guest Log:  *** Contents of shared directory: ***
2026-02-11 19:49:11 (15356): Guest Log: total 661224
2026-02-11 19:49:11 (15356): Guest Log: -rwxrwxrwx. 1 root root 495192556 Feb 11 17:37 ATLAS.root_0
2026-02-11 19:49:11 (15356): Guest Log: -rwxrwxrwx. 1 root root 180315296 Feb 11  2026 HITS.pool.root.1
2026-02-11 19:49:11 (15356): Guest Log: -rwxrwxrwx. 1 root root      8551 Feb 11 17:37 init_data.xml
2026-02-11 19:49:11 (15356): Guest Log: -rwxrwxrwx. 1 root root    597955 Feb 11 08:42 input.tar.gz
2026-02-11 19:49:11 (15356): Guest Log: -rwxrwxrwx. 1 root root    952320 Feb 11  2026 result.tar.gz
2026-02-11 19:49:11 (15356): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb 11 08:42 start_atlas.sh
2026-02-11 19:49:11 (15356): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-11 19:49:11 (15356): VM Completion File Detected.
2026-02-11 19:49:11 (15356): Powering off VM.
2026-02-11 19:49:11 (15356): Successfully stopped VM.
2026-02-11 19:49:11 (15356): Deregistering VM. (boinc_2446336c68cf32d9, slot#2)
2026-02-11 19:49:11 (15356): Removing network bandwidth throttle group from VM.
2026-02-11 19:49:11 (15356): Removing VM from VirtualBox.
2026-02-11 19:49:17 (15356): called boinc_finish(0)

</stderr_txt>
]]>

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