Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:30:05 (402617): wrapper (7.7.26015): starting
17:30:05 (402617): wrapper: running run_atlas (--nthreads 12)
[2026-02-11 17:30:05] Arguments: --nthreads 12
[2026-02-11 17:30:05] Threads: 12
[2026-02-11 17:30:05] Checking for CVMFS
[2026-02-11 17:30:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 17:30:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 17:54:15] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 17:54:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 17:54:16] 2.13.3.0 8767 1907 159444 156122 3 819 43127099 46080000 50465 130560 0 8352058 99.333 11731565 23797 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-02-11 17:54:16] CVMFS is ok
[2026-02-11 17:54:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-11 17:54:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-11 17:54:16] Further information can be found at the LHC@home message board.
[2026-02-11 17:54:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 17:54:16] Checking for apptainer binary...
[2026-02-11 17:54:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-11 17:54:16] Running /usr/bin/apptainer --version
[2026-02-11 17:54:17] apptainer version 1.4.5-2.el9
[2026-02-11 17:54:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 17:54:18] mff2102.farm.particle.cz
[2026-02-11 17:54:18] apptainer works
[2026-02-11 17:54:18] Set ATHENA_PROC_NUMBER=12
[2026-02-11 17:54:18] Set ATHENA_CORE_NUMBER=12
[2026-02-11 17:54:18] Starting ATLAS job with PandaID=7007443907
[2026-02-11 17:54:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-11 19:39:15]  *** The last 200 lines of the pilot log: ***
[2026-02-11 19:39:15]  protocol_id=None
[2026-02-11 19:39:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-11 19:39:15]  replicas=None
[2026-02-11 19:39:15]  scope=mc23_13p6TeV
[2026-02-11 19:39:15]  status=None
[2026-02-11 19:39:15]  status_code=0
[2026-02-11 19:39:15]  storage_token=
[2026-02-11 19:39:15]  surl=/scratch/.boinc/slots/6/PanDA_Pilot-7007443907/log.48442031._007842.job.log.tgz.1
[2026-02-11 19:39:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7b/d4/log.48442031._007842.job.log.tgz.1
[2026-02-11 19:39:15]  workdir=None
[2026-02-11 19:39:15] ]
[2026-02-11 19:39:15] 2026-02-11 18:38:29,962 | INFO     | transferring file log.48442031._007842.job.log.tgz.1 from /scratch/.boinc/slots/6/PanDA_Pilot-7007443907/log.48442031._007842.job.log.tgz.1 to /scratch/.boinc/slot
[2026-02-11 19:39:15] 2026-02-11 18:38:29,962 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/6/PanDA_Pilot-7007443907/log.48442031._007842.job.log.tgz.1 /scratch/.boinc/slots/6/log.48442031._007842.j
[2026-02-11 19:39:15] 2026-02-11 18:38:30,062 | WARNING  | process 453443 can no longer be monitored (due to stat problems) - aborting
[2026-02-11 19:39:15] 2026-02-11 18:38:30,063 | INFO     | using path: /scratch/.boinc/slots/6/PanDA_Pilot-7007443907/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 19:39:15] 2026-02-11 18:38:30,120 | INFO     | adding to output.list: log.48442031._007842.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7b/d4/log.48442031._007842.job.log.tg
[2026-02-11 19:39:15] 2026-02-11 18:38:30,121 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-11 19:39:15] 2026-02-11 18:38:30,121 | INFO     | summary of transferred files:
[2026-02-11 19:39:15] 2026-02-11 18:38:30,121 | INFO     |  -- lfn=log.48442031._007842.job.log.tgz.1, status_code=0, status=transferred
[2026-02-11 19:39:15] 2026-02-11 18:38:30,121 | INFO     | stage-out finished correctly
[2026-02-11 19:39:15] 2026-02-11 18:38:31,169 | INFO     | number of running child processes to parent process 453443: 1
[2026-02-11 19:39:15] 2026-02-11 18:38:31,169 | INFO     | maximum number of monitored processes: 7
[2026-02-11 19:39:15] 2026-02-11 18:38:31,424 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-11 19:39:15] 2026-02-11 18:38:31,641 | INFO     | time since job start (6121s) is within the limit (349056.0s)
[2026-02-11 19:39:15] 2026-02-11 18:38:33,686 | INFO     | monitor loop #418: job 0:7007443907 is in state 'finished'
[2026-02-11 19:39:15] 2026-02-11 18:38:33,686 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-11 19:39:15] 2026-02-11 18:38:34,071 | INFO     | PID=447596 has CPU usage=19.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-11 19:39:15] 2026-02-11 18:38:34,071 | INFO     | .. there are 61 such processes running
[2026-02-11 19:39:15] 2026-02-11 18:38:34,148 | INFO     | job 7007443907 has state=finished
[2026-02-11 19:39:15] 2026-02-11 18:38:34,149 | INFO     | preparing for final server update for job 7007443907 in state='finished'
[2026-02-11 19:39:15] 2026-02-11 18:38:34,149 | INFO     | reading metadata from: /scratch/.boinc/slots/6/PanDA_Pilot-7007443907/jobReport.json
[2026-02-11 19:39:15] 2026-02-11 18:38:34,151 | INFO     | added worker_node to metadata from /scratch/.boinc/slots/6/workernode_map.json
[2026-02-11 19:39:15] 2026-02-11 18:38:34,151 | INFO     | this job has now completed (state=finished)
[2026-02-11 19:39:15] 2026-02-11 18:38:34,151 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-11 19:39:15] 2026-02-11 18:38:34,152 | INFO     | log transfer has been attempted: DONE
[2026-02-11 19:39:15] 2026-02-11 18:38:34,152 | INFO     | job 7007443907 has finished - writing final server update
[2026-02-11 19:39:15] 2026-02-11 18:38:34,152 | INFO     | total number of processed events: 400 (read)
[2026-02-11 19:39:15] 2026-02-11 18:38:34,192 | INFO     | using path: /scratch/.boinc/slots/6/PanDA_Pilot-7007443907/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 19:39:15] 2026-02-11 18:38:34,200 | INFO     | extracted standard info from prmon json
[2026-02-11 19:39:15] 2026-02-11 18:38:34,200 | INFO     | extracted standard memory fields from prmon json
[2026-02-11 19:39:15] 2026-02-11 18:38:34,200 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-11 19:39:15] 2026-02-11 18:38:34,200 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-11 19:39:15] 2026-02-11 18:38:34,201 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-11 19:39:15] 2026-02-11 18:38:34,203 | INFO     | fitting pss+swap vs Time
[2026-02-11 19:39:15] 2026-02-11 18:38:34,203 | INFO     | sum of square deviations: 241429643.0
[2026-02-11 19:39:15] 2026-02-11 18:38:34,210 | INFO     | sum of deviations: 19173522684.0
[2026-02-11 19:39:15] 2026-02-11 18:38:34,211 | INFO     | mean x: 1770832179.5
[2026-02-11 19:39:15] 2026-02-11 18:38:34,211 | INFO     | mean y: 2603448.717391304
[2026-02-11 19:39:15] 2026-02-11 18:38:34,211 | INFO     | intersect: -140630876936.2924
[2026-02-11 19:39:15] 2026-02-11 18:38:34,211 | INFO     | chi2: 1.0637428206743655
[2026-02-11 19:39:15] 2026-02-11 18:38:34,211 | INFO     | current memory leak: 79.42 B/s (using 92 data points, chi2=1.06)
[2026-02-11 19:39:15] 2026-02-11 18:38:34,212 | INFO     | could have reported an average CPU frequency of 2725 MHz (7 samples)
[2026-02-11 19:39:15] 2026-02-11 18:38:34,212 | INFO     | ..............................
[2026-02-11 19:39:15] 2026-02-11 18:38:34,212 | INFO     | . Timing measurements:
[2026-02-11 19:39:15] 2026-02-11 18:38:34,212 | INFO     | . get job = 0 s
[2026-02-11 19:39:15] 2026-02-11 18:38:34,212 | INFO     | . initial setup = 50 s
[2026-02-11 19:39:15] 2026-02-11 18:38:34,212 | INFO     | . payload setup = 65 s
[2026-02-11 19:39:15] 2026-02-11 18:38:34,212 | INFO     | . stage-in = 0 s
[2026-02-11 19:39:15] 2026-02-11 18:38:34,212 | INFO     | . payload execution = 6044 s
[2026-02-11 19:39:15] 2026-02-11 18:38:34,213 | INFO     | . stage-out = 1 s
[2026-02-11 19:39:15] 2026-02-11 18:38:34,213 | INFO     | . log creation = 0 s
[2026-02-11 19:39:15] 2026-02-11 18:38:34,213 | INFO     | ..............................
[2026-02-11 19:39:15] 2026-02-11 18:38:34,512 | INFO     | 
[2026-02-11 19:39:15] 2026-02-11 18:38:34,513 | INFO     | job summary report
[2026-02-11 19:39:15] 2026-02-11 18:38:34,513 | INFO     | --------------------------------------------------
[2026-02-11 19:39:15] 2026-02-11 18:38:34,513 | INFO     | PanDA job id: 7007443907
[2026-02-11 19:39:15] 2026-02-11 18:38:34,513 | INFO     | task id: 48442031
[2026-02-11 19:39:15] 2026-02-11 18:38:34,513 | INFO     | errors: (none)
[2026-02-11 19:39:15] 2026-02-11 18:38:34,513 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-11 19:39:15] 2026-02-11 18:38:34,513 | INFO     | pilot state: finished 
[2026-02-11 19:39:15] 2026-02-11 18:38:34,513 | INFO     | transexitcode: 0
[2026-02-11 19:39:15] 2026-02-11 18:38:34,513 | INFO     | exeerrorcode: 0
[2026-02-11 19:39:15] 2026-02-11 18:38:34,513 | INFO     | exeerrordiag: 
[2026-02-11 19:39:15] 2026-02-11 18:38:34,514 | INFO     | exitcode: 0
[2026-02-11 19:39:15] 2026-02-11 18:38:34,514 | INFO     | exitmsg: OK
[2026-02-11 19:39:15] 2026-02-11 18:38:34,514 | INFO     | cpuconsumptiontime: 39522 s
[2026-02-11 19:39:15] 2026-02-11 18:38:34,514 | INFO     | nevents: 400
[2026-02-11 19:39:15] 2026-02-11 18:38:34,514 | INFO     | neventsw: 0
[2026-02-11 19:39:15] 2026-02-11 18:38:34,514 | INFO     | pid: 453443
[2026-02-11 19:39:15] 2026-02-11 18:38:34,514 | INFO     | pgrp: 453443
[2026-02-11 19:39:15] 2026-02-11 18:38:34,514 | INFO     | corecount: 12
[2026-02-11 19:39:15] 2026-02-11 18:38:34,514 | INFO     | event service: False
[2026-02-11 19:39:15] 2026-02-11 18:38:34,514 | INFO     | sizes: {0: 2281686, 1: 2261612, 2: 2282231, 6114: 2309203, 6117: 2318203, 6119: 2318259, 6121: 2318581}
[2026-02-11 19:39:15] 2026-02-11 18:38:34,514 | INFO     | --------------------------------------------------
[2026-02-11 19:39:15] 2026-02-11 18:38:34,514 | INFO     | 
[2026-02-11 19:39:15] 2026-02-11 18:38:34,514 | INFO     | executing command: ls -lF /scratch/.boinc/slots/6
[2026-02-11 19:39:15] 2026-02-11 18:38:34,775 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-11 19:39:15] 2026-02-11 18:38:34,775 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-11 19:39:15] 2026-02-11 18:38:34,775 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-11 19:39:15] 2026-02-11 18:38:34,775 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-11 19:39:15] 2026-02-11 18:38:34,775 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-11 19:39:15] 2026-02-11 18:38:34,776 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-11 19:39:15] 2026-02-11 18:38:34,776 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-11 19:39:15] 2026-02-11 18:38:34,776 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-11 19:39:15] 2026-02-11 18:38:34,776 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-11 19:39:15] 2026-02-11 18:38:34,776 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-11 19:39:15] 2026-02-11 18:38:34,776 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-11 19:39:15] 2026-02-11 18:38:34,776 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-11 19:39:15] 2026-02-11 18:38:34,776 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-11 19:39:15] 2026-02-11 18:38:34,776 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-11 19:39:15] 2026-02-11 18:38:34,776 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-11 19:39:15] 2026-02-11 18:38:34,776 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-11 19:39:15] 2026-02-11 18:38:34,776 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-11 19:39:15] 2026-02-11 18:38:34,776 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-11 19:39:15] 2026-02-11 18:38:34,777 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-11 19:39:15] 2026-02-11 18:38:34,777 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-11 19:39:15] 2026-02-11 18:38:34,777 | INFO     | job 7007443907 has completed (purged errors)
[2026-02-11 19:39:15] 2026-02-11 18:38:34,777 | INFO     | overall cleanup function is called
[2026-02-11 19:39:15] 2026-02-11 18:38:35,799 | INFO     | --- collectZombieJob: --- 10, [453443]
[2026-02-11 19:39:15] 2026-02-11 18:38:35,800 | INFO     | zombie collector waiting for pid 453443
[2026-02-11 19:39:15] 2026-02-11 18:38:35,800 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-11 19:39:15] 2026-02-11 18:38:35,800 | INFO     | collected zombie processes
[2026-02-11 19:39:15] 2026-02-11 18:38:35,800 | INFO     | will attempt to kill all subprocesses of pid=453443
[2026-02-11 19:39:15] 2026-02-11 18:38:37,168 | INFO     | process IDs to be killed: [453443] (in reverse order)
[2026-02-11 19:39:15] 2026-02-11 18:38:37,660 | WARNING  | found no corresponding commands to process id(s)
[2026-02-11 19:39:15] 2026-02-11 18:38:37,661 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-11 19:39:15] 2026-02-11 18:38:37,729 | INFO     | did not find any defunct processes belonging to 453443
[2026-02-11 19:39:15] 2026-02-11 18:38:37,782 | INFO     | did not find any defunct processes belonging to 453443
[2026-02-11 19:39:15] 2026-02-11 18:38:37,782 | INFO     | ready for new job
[2026-02-11 19:39:15] 2026-02-11 18:38:37,782 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-11 19:39:15] 2026-02-11 18:38:37,788 | INFO     | **************************************
[2026-02-11 19:39:15] 2026-02-11 18:38:37,788 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-11 19:39:15] 2026-02-11 18:38:37,788 | INFO     | **************************************
[2026-02-11 19:39:15] 2026-02-11 18:38:37,789 | INFO     | 
[2026-02-11 19:39:15] 2026-02-11 18:38:37,799 | INFO     | architecture information:
[2026-02-11 19:39:15] 2026-02-11 18:38:37,799 | INFO     | executing command: cat /etc/os-release
[2026-02-11 19:39:15] 2026-02-11 18:38:37,895 | INFO     | cat /etc/os-release:
[2026-02-11 19:39:15] NAME="CentOS Linux"
[2026-02-11 19:39:15] VERSION="7 (Core)"
[2026-02-11 19:39:15] ID="centos"
[2026-02-11 19:39:15] ID_LIKE="rhel fedora"
[2026-02-11 19:39:15] VERSION_ID="7"
[2026-02-11 19:39:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-11 19:39:15] ANSI_COLOR="0;31"
[2026-02-11 19:39:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-11 19:39:15] HOME_URL="https://www.centos.org/"
[2026-02-11 19:39:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-11 19:39:15] 
[2026-02-11 19:39:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-11 19:39:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-11 19:39:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-11 19:39:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-11 19:39:15] 
[2026-02-11 19:39:15] 2026-02-11 18:38:37,895 | INFO     | **************************************
[2026-02-11 19:39:15] 2026-02-11 18:38:38,398 | INFO     | executing command: df -mP /scratch/.boinc/slots/6
[2026-02-11 19:39:15] 2026-02-11 18:38:38,508 | INFO     | sufficient remaining disk space (1248863453184 B)
[2026-02-11 19:39:15] 2026-02-11 18:38:38,508 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-11 19:39:15] 2026-02-11 18:38:38,509 | INFO     | current server update state: UPDATING_FINAL
[2026-02-11 19:39:15] 2026-02-11 18:38:38,509 | INFO     | update_server=False
[2026-02-11 19:39:15] 2026-02-11 18:38:38,509 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-11 19:39:15] 2026-02-11 18:38:38,509 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-11 19:39:15] 2026-02-11 18:38:38,509 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-11 19:39:15] 2026-02-11 18:38:38,703 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-11 19:39:15] 2026-02-11 18:38:38,704 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-11 19:39:15] 2026-02-11 18:38:38,704 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-11 19:39:15] 2026-02-11 18:38:38,704 | INFO     | will abort loop
[2026-02-11 19:39:15] 2026-02-11 18:38:39,056 | INFO     | all payload control threads have been joined
[2026-02-11 19:39:15] 2026-02-11 18:38:39,189 | INFO     | all data control threads have been joined
[2026-02-11 19:39:15] 2026-02-11 18:38:39,384 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-11 19:39:15] 2026-02-11 18:38:39,513 | INFO     | [job] retrieve thread has finished
[2026-02-11 19:39:15] 2026-02-11 18:38:39,676 | INFO     | [payload] validate_post thread has finished
[2026-02-11 19:39:15] 2026-02-11 18:38:39,677 | INFO     | [payload] failed_post thread has finished
[2026-02-11 19:39:15] 2026-02-11 18:38:39,710 | INFO     | [job] job monitor thread has finished
[2026-02-11 19:39:15] 2026-02-11 18:38:39,827 | INFO     | all job control threads have been joined
[2026-02-11 19:39:15] 2026-02-11 18:38:39,919 | INFO     | [job] create_data_payload thread has finished
[2026-02-11 19:39:15] 2026-02-11 18:38:40,063 | INFO     | [payload] control thread has finished
[2026-02-11 19:39:15] 2026-02-11 18:38:40,072 | INFO     | [data] copytool_in thread has finished
[2026-02-11 19:39:15] 2026-02-11 18:38:40,077 | INFO     | [monitor] cgroup control has ended
[2026-02-11 19:39:15] 2026-02-11 18:38:40,197 | INFO     | [data] control thread has finished
[2026-02-11 19:39:15] 2026-02-11 18:38:40,258 | INFO     | [payload] execute_payloads thread has finished
[2026-02-11 19:39:15] 2026-02-11 18:38:40,266 | INFO     | [job] validate thread has finished
[2026-02-11 19:39:15] 2026-02-11 18:38:40,391 | INFO     | [job] queue monitor thread has finished
[2026-02-11 19:39:15] 2026-02-11 18:38:40,473 | INFO     | [payload] validate_pre thread has finished
[2026-02-11 19:39:15] 2026-02-11 18:38:40,516 | INFO     | [data] copytool_out thread has finished
[2026-02-11 19:39:15] 2026-02-11 18:38:40,834 | INFO     | [job] control thread has finished
[2026-02-11 19:39:15] 2026-02-11 18:38:42,524 | INFO     | [data] queue_monitor thread has finished
[2026-02-11 19:39:15] 2026-02-11 18:38:48,694 | INFO     | job.realtimelogging is not enabled
[2026-02-11 19:39:15] 2026-02-11 18:38:49,706 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-11 19:39:15] 2026-02-11 18:38:50,516 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140525364328256)>', '<ExcThread(monitor, started 140524971333376)>']
[2026-02-11 19:39:15] 2026-02-11 18:38:55,542 | INFO     | all workflow threads have been joined
[2026-02-11 19:39:15] 2026-02-11 18:38:55,543 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-11 19:39:15] 2026-02-11 18:38:55,543 | INFO     | traces error code: 0
[2026-02-11 19:39:15] 2026-02-11 18:38:55,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-11 19:39:15] 2026-02-11 18:39:07,566 | INFO     | PID=447596 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-11 19:39:15] 2026-02-11 18:39:07,567 | INFO     | .. there are 61 such processes running
[2026-02-11 19:39:15] 2026-02-11 18:39:07,568 | INFO     | found 0 job(s) in 20 queues
[2026-02-11 19:39:15] 2026-02-11 18:39:07,568 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-11 19:39:15] 2026-02-11 18:39:07,568 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-11 19:39:15] 2026-02-11 18:39:07,568 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-11 19:39:15] 2026-02-11 18:39:07,568 | INFO     | [monitor] control thread has ended
[2026-02-11 19:39:15] 2026-02-11 18:39:08,138 [wrapper] ==== pilot stdout END ====
[2026-02-11 19:39:15] 2026-02-11 18:39:08,170 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-11 19:39:15] 2026-02-11 18:39:08,210 [wrapper] pilotpid: 447596
[2026-02-11 19:39:15] 2026-02-11 18:39:08,251 [wrapper] Pilot exit status: 0
[2026-02-11 19:39:15] 2026-02-11 18:39:08,382 [wrapper] pandaids: 7007443907
[2026-02-11 19:39:15] 2026-02-11 18:39:08,689 [wrapper] cleanup supervisor_pilot  771889 447597
[2026-02-11 19:39:15] 2026-02-11 18:39:08,741 [wrapper] Test setup, not cleaning
[2026-02-11 19:39:15] 2026-02-11 18:39:08,787 [wrapper] apfmon messages muted
[2026-02-11 19:39:15] 2026-02-11 18:39:08,820 [wrapper] ==== wrapper stdout END ====
[2026-02-11 19:39:15] 2026-02-11 18:39:08,855 [wrapper] ==== wrapper stderr END ====
[2026-02-11 19:39:15]  *** Error codes and diagnostics ***
[2026-02-11 19:39:15]     "exeErrorCode": 0,
[2026-02-11 19:39:15]     "exeErrorDiag": "",
[2026-02-11 19:39:15]     "pilotErrorCode": 0,
[2026-02-11 19:39:15]     "pilotErrorDiag": "",
[2026-02-11 19:39:15]  *** Listing of results directory ***
[2026-02-11 19:39:15] total 674372
[2026-02-11 19:39:15] -rw-r--r-- 1 boinc boinc    584627 Feb 10 11:23 pilot3.tar.gz
[2026-02-11 19:39:15] -rw-r--r-- 1 boinc boinc      5111 Feb 10 11:23 queuedata.json
[2026-02-11 19:39:15] -rwx------ 1 boinc boinc     36322 Feb 10 11:24 runpilot2-wrapper.sh
[2026-02-11 19:39:15] -rw-r--r-- 1 boinc boinc       100 Feb 11 17:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-11 19:39:15] -rwxr-xr-x 1 boinc boinc      7986 Feb 11 17:30 run_atlas
[2026-02-11 19:39:15] -rw-r--r-- 1 boinc boinc       105 Feb 11 17:30 job.xml
[2026-02-11 19:39:15] -rw-r--r-- 2 boinc boinc 501959856 Feb 11 17:30 EVNT.48442027._000133.pool.root.1
[2026-02-11 19:39:15] -rw-r--r-- 1 boinc boinc      6676 Feb 11 17:30 init_data.xml
[2026-02-11 19:39:15] drwxrwx--x 2 boinc boinc      4096 Feb 11 17:30 shared
[2026-02-11 19:39:15] -rw-r--r-- 2 boinc boinc    597961 Feb 11 17:30 input.tar.gz
[2026-02-11 19:39:15] -rw-r--r-- 2 boinc boinc     15845 Feb 11 17:30 start_atlas.sh
[2026-02-11 19:39:15] -rw-r--r-- 1 boinc boinc         0 Feb 11 17:30 boinc_lockfile
[2026-02-11 19:39:15] -rw-r--r-- 1 boinc boinc      2529 Feb 11 17:54 pandaJob.out
[2026-02-11 19:39:15] -rw------- 1 boinc boinc   1008160 Feb 11 17:55 agis_schedconf.cvmfs.json
[2026-02-11 19:39:15] -rw------- 1 boinc boinc   1512955 Feb 11 17:55 agis_ddmendpoints.agis.ALL.json
[2026-02-11 19:39:15] -rw------- 1 boinc boinc       436 Feb 11 17:56 workernode_map.json
[2026-02-11 19:39:15] drwx------ 5 boinc boinc      4096 Feb 11 17:56 pilot3
[2026-02-11 19:39:15] -rw------- 1 boinc boinc 182120052 Feb 11 19:37 HITS.48442031._007842.pool.root.1
[2026-02-11 19:39:15] -rw-r--r-- 1 boinc boinc       529 Feb 11 19:37 boinc_task_state.xml
[2026-02-11 19:39:15] -rw------- 1 boinc boinc      1038 Feb 11 19:38 memory_monitor_summary.json
[2026-02-11 19:39:15] -rw------- 1 boinc boinc    433926 Feb 11 19:38 log.48442031._007842.job.log.tgz.1
[2026-02-11 19:39:15] -rw------- 1 boinc boinc      6362 Feb 11 19:38 heartbeat.json
[2026-02-11 19:39:15] -rw------- 1 boinc boinc       822 Feb 11 19:39 pilotlog.txt
[2026-02-11 19:39:15] -rw------- 1 boinc boinc        95 Feb 11 19:39 pilot_heartbeat.json
[2026-02-11 19:39:15] -rw------- 1 boinc boinc    837838 Feb 11 19:39 log.48442031._007842.job.log.1
[2026-02-11 19:39:15] -rw------- 1 boinc boinc       357 Feb 11 19:39 output.list
[2026-02-11 19:39:15] -rw-r--r-- 1 boinc boinc       620 Feb 11 19:39 runtime_log
[2026-02-11 19:39:15] -rw------- 1 boinc boinc   1290240 Feb 11 19:39 result.tar.gz
[2026-02-11 19:39:15] -rw-r--r-- 1 boinc boinc      8879 Feb 11 19:39 runtime_log.err
[2026-02-11 19:39:15] -rw------- 1 boinc boinc       665 Feb 11 19:39 hMaLDmf5z98n9Rq4apOajLDm4fhM0noT9bVooX4SDmg9gKDm0in6kn.diag
[2026-02-11 19:39:15] -rw-r--r-- 1 boinc boinc        26 Feb 11 19:39 wrapper_checkpoint.txt
[2026-02-11 19:39:15] -rw-r--r-- 1 boinc boinc      8192 Feb 11 19:39 boinc_mmap_file
[2026-02-11 19:39:15] -rw-r--r-- 1 boinc boinc     21892 Feb 11 19:39 stderr.txt
[2026-02-11 19:39:15] HITS file was successfully produced:
[2026-02-11 19:39:15] -rw------- 1 boinc boinc 182120052 Feb 11 19:37 shared/HITS.pool.root.1
[2026-02-11 19:39:15]  *** Contents of shared directory: ***
[2026-02-11 19:39:15] total 669916
[2026-02-11 19:39:15] -rw-r--r-- 2 boinc boinc 501959856 Feb 11 17:30 ATLAS.root_0
[2026-02-11 19:39:15] -rw-r--r-- 2 boinc boinc    597961 Feb 11 17:30 input.tar.gz
[2026-02-11 19:39:15] -rw-r--r-- 2 boinc boinc     15845 Feb 11 17:30 start_atlas.sh
[2026-02-11 19:39:15] -rw------- 1 boinc boinc 182120052 Feb 11 19:37 HITS.pool.root.1
[2026-02-11 19:39:15] -rw------- 1 boinc boinc   1290240 Feb 11 19:39 result.tar.gz
19:39:17 (402617): run_atlas exited; CPU time 39805.171778
19:39:17 (402617): called boinc_finish(0)

</stderr_txt>
]]>

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