Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:43:01 (23631): wrapper (7.7.26015): starting
19:43:01 (23631): wrapper: running run_atlas (--nthreads 8)
[2026-02-11 19:43:01] Arguments: --nthreads 8
[2026-02-11 19:43:01] Threads: 8
[2026-02-11 19:43:01] Checking for CVMFS
[2026-02-11 19:43:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 19:43:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 19:43:03] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 19:43:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 19:43:04] 2.11.2.0 7073 47812 109456 156125 1 249 24049704 25165824 4765 130560 0 16523286 99.762 19016731 3383 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-11 19:43:04] CVMFS is ok
[2026-02-11 19:43:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 19:43:04] Checking for apptainer binary...
[2026-02-11 19:43:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-11 19:43:04] Running /usr/bin/apptainer --version
[2026-02-11 19:43:04] apptainer version 1.3.2-1.el7
[2026-02-11 19:43:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 19:43:30] cg-vwn391.simple-grid.lan
[2026-02-11 19:43:30] apptainer works
[2026-02-11 19:43:30] Set ATHENA_PROC_NUMBER=8
[2026-02-11 19:43:30] Set ATHENA_CORE_NUMBER=8
[2026-02-11 19:43:30] Starting ATLAS job with PandaID=7011510943
[2026-02-11 19:43:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/27 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 01:59:11]  *** The last 200 lines of the pilot log: ***
[2026-02-12 01:59:11] 2026-02-12 00:58:12,464 | INFO     | using path: /var/lib/boinc/slots/27/PanDA_Pilot-7011510943/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 01:59:11] 2026-02-12 00:58:12,465 | INFO     | extracted standard info from prmon json
[2026-02-12 01:59:11] 2026-02-12 00:58:12,465 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 01:59:11] 2026-02-12 00:58:12,465 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 01:59:11] 2026-02-12 00:58:12,465 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 01:59:11] 2026-02-12 00:58:12,466 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 01:59:11] 2026-02-12 00:58:12,486 | INFO     | fitting pss+swap vs Time
[2026-02-12 01:59:11] 2026-02-12 00:58:12,487 | INFO     | sum of square deviations: 14467136370.0
[2026-02-12 01:59:11] 2026-02-12 00:58:12,491 | INFO     | sum of deviations: 160312798931.0
[2026-02-12 01:59:11] 2026-02-12 00:58:12,491 | INFO     | mean x: 1770846872.5
[2026-02-12 01:59:11] 2026-02-12 00:58:12,491 | INFO     | mean y: 2518255.8722222224
[2026-02-12 01:59:11] 2026-02-12 00:58:12,491 | INFO     | intersect: -19620537153.861412
[2026-02-12 01:59:11] 2026-02-12 00:58:12,492 | INFO     | chi2: 5.715968604480787
[2026-02-12 01:59:11] 2026-02-12 00:58:12,493 | INFO     | sum of square deviations: 13872669410.0
[2026-02-12 01:59:11] 2026-02-12 00:58:12,497 | INFO     | sum of deviations: 183248059916.00003
[2026-02-12 01:59:11] 2026-02-12 00:58:12,497 | INFO     | mean x: 1770846720.0
[2026-02-12 01:59:11] 2026-02-12 00:58:12,497 | INFO     | mean y: 2524066.574647887
[2026-02-12 01:59:11] 2026-02-12 00:58:12,497 | INFO     | intersect: -23389096987.603718
[2026-02-12 01:59:11] 2026-02-12 00:58:12,498 | INFO     | chi2: 4.920051775677128
[2026-02-12 01:59:11] 2026-02-12 00:58:12,498 | INFO     | current chi2=4.920051775677128 (change=13.924443674860894 %)
[2026-02-12 01:59:11] 2026-02-12 00:58:12,498 | INFO     | right removable region: 354
[2026-02-12 01:59:11] 2026-02-12 00:58:12,498 | INFO     | sum of square deviations: 13872669410.0
[2026-02-12 01:59:11] 2026-02-12 00:58:12,509 | INFO     | sum of deviations: 37843640245.0
[2026-02-12 01:59:11] 2026-02-12 00:58:12,509 | INFO     | mean x: 1770847025.0
[2026-02-12 01:59:11] 2026-02-12 00:58:12,509 | INFO     | mean y: 2549650.509859155
[2026-02-12 01:59:11] 2026-02-12 00:58:12,509 | INFO     | intersect: -4828193140.399661
[2026-02-12 01:59:11] 2026-02-12 00:58:12,510 | INFO     | chi2: 1.5680015835536096
[2026-02-12 01:59:11] 2026-02-12 00:58:12,510 | INFO     | current chi2=1.5680015835536096 (change=72.56805115541674 %)
[2026-02-12 01:59:11] 2026-02-12 00:58:12,511 | INFO     | sum of square deviations: 13294714387.5
[2026-02-12 01:59:11] 2026-02-12 00:58:12,515 | INFO     | sum of deviations: -4345075109.499996
[2026-02-12 01:59:11] 2026-02-12 00:58:12,515 | INFO     | mean x: 1770847177.5
[2026-02-12 01:59:11] 2026-02-12 00:58:12,515 | INFO     | mean y: 2560721.522857143
[2026-02-12 01:59:11] 2026-02-12 00:58:12,515 | INFO     | intersect: 581321856.9194992
[2026-02-12 01:59:11] 2026-02-12 00:58:12,516 | INFO     | chi2: 0.8766418061712478
[2026-02-12 01:59:11] 2026-02-12 00:58:12,516 | INFO     | current chi2=0.8766418061712478 (change=44.091778007998705 %)
[2026-02-12 01:59:11] 2026-02-12 00:58:12,516 | INFO     | sum of square deviations: 12733038740.0
[2026-02-12 01:59:11] 2026-02-12 00:58:12,520 | INFO     | sum of deviations: -5221020988.0
[2026-02-12 01:59:11] 2026-02-12 00:58:12,521 | INFO     | mean x: 1770847330.0
[2026-02-12 01:59:11] 2026-02-12 00:58:12,521 | INFO     | mean y: 2560944.188405797
[2026-02-12 01:59:11] 2026-02-12 00:58:12,521 | INFO     | intersect: 728674424.6594282
[2026-02-12 01:59:11] 2026-02-12 00:58:12,521 | INFO     | chi2: 0.8600688707344988
[2026-02-12 01:59:11] 2026-02-12 00:58:12,521 | INFO     | current chi2=0.8600688707344988 (change=1.8905025199666943 %)
[2026-02-12 01:59:11] 2026-02-12 00:58:12,521 | INFO     | left removable region: 30
[2026-02-12 01:59:11] 2026-02-12 00:58:12,522 | INFO     | sum of square deviations: 10546523325.0
[2026-02-12 01:59:11] 2026-02-12 00:58:12,530 | INFO     | sum of deviations: 12109351956.499998
[2026-02-12 01:59:11] 2026-02-12 00:58:12,530 | INFO     | mean x: 1770847604.5
[2026-02-12 01:59:11] 2026-02-12 00:58:12,530 | INFO     | mean y: 2569713.577160494
[2026-02-12 01:59:11] 2026-02-12 00:58:12,530 | INFO     | intersect: -2030689612.117775
[2026-02-12 01:59:11] 2026-02-12 00:58:12,531 | INFO     | chi2: 0.0030779644287157724
[2026-02-12 01:59:11] 2026-02-12 00:58:12,531 | INFO     | current memory leak: 1.15 B/s (using 324 data points, chi2=0.00)
[2026-02-12 01:59:11] 2026-02-12 00:58:12,532 | INFO     | could have reported an average CPU frequency of 1999 MHz (16 samples)
[2026-02-12 01:59:11] 2026-02-12 00:58:12,532 | INFO     | ..............................
[2026-02-12 01:59:11] 2026-02-12 00:58:12,532 | INFO     | . Timing measurements:
[2026-02-12 01:59:11] 2026-02-12 00:58:12,532 | INFO     | . get job = 0 s
[2026-02-12 01:59:11] 2026-02-12 00:58:12,532 | INFO     | . initial setup = 103 s
[2026-02-12 01:59:11] 2026-02-12 00:58:12,532 | INFO     | . payload setup = 98 s
[2026-02-12 01:59:11] 2026-02-12 00:58:12,532 | INFO     | . stage-in = 0 s
[2026-02-12 01:59:11] 2026-02-12 00:58:12,533 | INFO     | . payload execution = 22077 s
[2026-02-12 01:59:11] 2026-02-12 00:58:12,533 | INFO     | . stage-out = 5 s
[2026-02-12 01:59:11] 2026-02-12 00:58:12,533 | INFO     | . log creation = 1 s
[2026-02-12 01:59:11] 2026-02-12 00:58:12,533 | INFO     | ..............................
[2026-02-12 01:59:11] 2026-02-12 00:58:12,534 | INFO     | time since job start (22190s) is within the limit (349056.0s)
[2026-02-12 01:59:11] 2026-02-12 00:58:12,650 | INFO     | 
[2026-02-12 01:59:11] 2026-02-12 00:58:12,650 | INFO     | job summary report
[2026-02-12 01:59:11] 2026-02-12 00:58:12,650 | INFO     | --------------------------------------------------
[2026-02-12 01:59:11] 2026-02-12 00:58:12,650 | INFO     | PanDA job id: 7011510943
[2026-02-12 01:59:11] 2026-02-12 00:58:12,650 | INFO     | task id: 48431096
[2026-02-12 01:59:11] 2026-02-12 00:58:12,650 | INFO     | errors: (none)
[2026-02-12 01:59:11] 2026-02-12 00:58:12,650 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 01:59:11] 2026-02-12 00:58:12,650 | INFO     | pilot state: finished 
[2026-02-12 01:59:11] 2026-02-12 00:58:12,651 | INFO     | transexitcode: 0
[2026-02-12 01:59:11] 2026-02-12 00:58:12,651 | INFO     | exeerrorcode: 0
[2026-02-12 01:59:11] 2026-02-12 00:58:12,651 | INFO     | exeerrordiag: 
[2026-02-12 01:59:11] 2026-02-12 00:58:12,651 | INFO     | exitcode: 0
[2026-02-12 01:59:11] 2026-02-12 00:58:12,651 | INFO     | exitmsg: OK
[2026-02-12 01:59:11] 2026-02-12 00:58:12,651 | INFO     | cpuconsumptiontime: 86690 s
[2026-02-12 01:59:11] 2026-02-12 00:58:12,651 | INFO     | nevents: 400
[2026-02-12 01:59:11] 2026-02-12 00:58:12,651 | INFO     | neventsw: 0
[2026-02-12 01:59:11] 2026-02-12 00:58:12,651 | INFO     | pid: 31897
[2026-02-12 01:59:11] 2026-02-12 00:58:12,651 | INFO     | pgrp: 31897
[2026-02-12 01:59:11] 2026-02-12 00:58:12,651 | INFO     | corecount: 8
[2026-02-12 01:59:11] 2026-02-12 00:58:12,652 | INFO     | event service: False
[2026-02-12 01:59:11] 2026-02-12 00:58:12,652 | INFO     | sizes: {0: 2281783, 1: 2282244, 2: 2282244, 22179: 2316211, 22180: 2316210, 22186: 2325266, 22187: 2325644}
[2026-02-12 01:59:11] 2026-02-12 00:58:12,652 | INFO     | --------------------------------------------------
[2026-02-12 01:59:11] 2026-02-12 00:58:12,652 | INFO     | 
[2026-02-12 01:59:11] 2026-02-12 00:58:12,652 | INFO     | executing command: ls -lF /var/lib/boinc/slots/27
[2026-02-12 01:59:11] 2026-02-12 00:58:12,874 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 01:59:11] 2026-02-12 00:58:12,875 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 01:59:11] 2026-02-12 00:58:12,875 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 01:59:11] 2026-02-12 00:58:12,875 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 01:59:11] 2026-02-12 00:58:12,875 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 01:59:11] 2026-02-12 00:58:12,875 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 01:59:11] 2026-02-12 00:58:12,875 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 01:59:11] 2026-02-12 00:58:12,875 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 01:59:11] 2026-02-12 00:58:12,876 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 01:59:11] 2026-02-12 00:58:12,876 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 01:59:11] 2026-02-12 00:58:12,876 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 01:59:11] 2026-02-12 00:58:12,876 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 01:59:11] 2026-02-12 00:58:12,876 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 01:59:11] 2026-02-12 00:58:12,876 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 01:59:11] 2026-02-12 00:58:12,876 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 01:59:11] 2026-02-12 00:58:12,876 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 01:59:11] 2026-02-12 00:58:12,877 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 01:59:11] 2026-02-12 00:58:12,877 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 01:59:11] 2026-02-12 00:58:12,877 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 01:59:11] 2026-02-12 00:58:12,877 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 01:59:11] 2026-02-12 00:58:12,877 | INFO     | job 7011510943 has completed (purged errors)
[2026-02-12 01:59:11] 2026-02-12 00:58:12,877 | INFO     | overall cleanup function is called
[2026-02-12 01:59:11] 2026-02-12 00:58:13,886 | INFO     | --- collectZombieJob: --- 10, [31897]
[2026-02-12 01:59:11] 2026-02-12 00:58:13,886 | INFO     | zombie collector waiting for pid 31897
[2026-02-12 01:59:11] 2026-02-12 00:58:13,886 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 01:59:11] 2026-02-12 00:58:13,886 | INFO     | collected zombie processes
[2026-02-12 01:59:11] 2026-02-12 00:58:13,886 | INFO     | will attempt to kill all subprocesses of pid=31897
[2026-02-12 01:59:11] 2026-02-12 00:58:13,994 | INFO     | process IDs to be killed: [31897] (in reverse order)
[2026-02-12 01:59:11] 2026-02-12 00:58:14,433 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 01:59:11] 2026-02-12 00:58:14,434 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 01:59:11] 2026-02-12 00:58:14,437 | INFO     | did not find any defunct processes belonging to 31897
[2026-02-12 01:59:11] 2026-02-12 00:58:14,440 | INFO     | did not find any defunct processes belonging to 31897
[2026-02-12 01:59:11] 2026-02-12 00:58:14,440 | INFO     | ready for new job
[2026-02-12 01:59:11] 2026-02-12 00:58:14,440 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 01:59:11] 2026-02-12 00:58:14,442 | INFO     | **************************************
[2026-02-12 01:59:11] 2026-02-12 00:58:14,443 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 01:59:11] 2026-02-12 00:58:14,443 | INFO     | **************************************
[2026-02-12 01:59:11] 2026-02-12 00:58:14,443 | INFO     | 
[2026-02-12 01:59:11] 2026-02-12 00:58:14,443 | INFO     | pilot is running in a VM
[2026-02-12 01:59:11] 2026-02-12 00:58:14,444 | INFO     | architecture information:
[2026-02-12 01:59:11] 2026-02-12 00:58:14,451 | INFO     | executing command: cat /etc/os-release
[2026-02-12 01:59:11] 2026-02-12 00:58:14,645 | INFO     | cat /etc/os-release:
[2026-02-12 01:59:11] NAME="CentOS Linux"
[2026-02-12 01:59:11] VERSION="7 (Core)"
[2026-02-12 01:59:11] ID="centos"
[2026-02-12 01:59:11] ID_LIKE="rhel fedora"
[2026-02-12 01:59:11] VERSION_ID="7"
[2026-02-12 01:59:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 01:59:11] ANSI_COLOR="0;31"
[2026-02-12 01:59:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 01:59:11] HOME_URL="https://www.centos.org/"
[2026-02-12 01:59:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 01:59:11] 
[2026-02-12 01:59:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 01:59:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 01:59:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 01:59:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 01:59:11] 
[2026-02-12 01:59:11] 2026-02-12 00:58:14,645 | INFO     | **************************************
[2026-02-12 01:59:11] 2026-02-12 00:58:15,149 | INFO     | executing command: df -mP /var/lib/boinc/slots/27
[2026-02-12 01:59:11] 2026-02-12 00:58:15,326 | INFO     | sufficient remaining disk space (494747516928 B)
[2026-02-12 01:59:11] 2026-02-12 00:58:15,326 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 01:59:11] 2026-02-12 00:58:15,326 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 01:59:11] 2026-02-12 00:58:15,326 | INFO     | update_server=False
[2026-02-12 01:59:11] 2026-02-12 00:58:15,326 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 01:59:11] 2026-02-12 00:58:15,758 | INFO     | all data control threads have been joined
[2026-02-12 01:59:11] 2026-02-12 00:58:15,827 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-12 01:59:11] 2026-02-12 00:58:15,827 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-12 01:59:11] 2026-02-12 00:58:15,827 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 01:59:11] 2026-02-12 00:58:15,827 | INFO     | will abort loop
[2026-02-12 01:59:11] 2026-02-12 00:58:16,221 | INFO     | all job control threads have been joined
[2026-02-12 01:59:11] 2026-02-12 00:58:16,332 | INFO     | [job] retrieve thread has finished
[2026-02-12 01:59:11] 2026-02-12 00:58:16,590 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 01:59:11] 2026-02-12 00:58:16,607 | INFO     | [data] copytool_in thread has finished
[2026-02-12 01:59:11] 2026-02-12 00:58:16,762 | INFO     | [payload] failed_post thread has finished
[2026-02-12 01:59:11] 2026-02-12 00:58:16,764 | INFO     | [data] control thread has finished
[2026-02-12 01:59:11] 2026-02-12 00:58:16,797 | INFO     | all payload control threads have been joined
[2026-02-12 01:59:11] 2026-02-12 00:58:16,832 | INFO     | [job] job monitor thread has finished
[2026-02-12 01:59:11] 2026-02-12 00:58:16,992 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 01:59:11] 2026-02-12 00:58:17,042 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 01:59:11] 2026-02-12 00:58:17,227 | INFO     | [job] control thread has finished
[2026-02-12 01:59:11] 2026-02-12 00:58:17,307 | INFO     | [payload] validate_post thread has finished
[2026-02-12 01:59:11] 2026-02-12 00:58:17,322 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 01:59:11] 2026-02-12 00:58:17,335 | INFO     | [job] validate thread has finished
[2026-02-12 01:59:11] 2026-02-12 00:58:17,510 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 01:59:11] 2026-02-12 00:58:17,667 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 01:59:11] 2026-02-12 00:58:17,803 | INFO     | [payload] control thread has finished
[2026-02-12 01:59:11] 2026-02-12 00:58:18,472 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 01:59:11] 2026-02-12 00:58:18,597 | INFO     | [data] copytool_out thread has finished
[2026-02-12 01:59:11] 2026-02-12 00:58:18,672 | INFO     | [job] queue monitor thread has finished
[2026-02-12 01:59:11] 2026-02-12 00:58:22,481 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 01:59:11] 2026-02-12 00:58:45,715 | INFO     | PID=27408 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-12 01:59:11] 2026-02-12 00:58:45,715 | INFO     | .. there are 9 such processes running
[2026-02-12 01:59:11] 2026-02-12 00:58:45,716 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 01:59:11] 2026-02-12 00:58:45,716 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 01:59:11] 2026-02-12 00:58:45,716 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 01:59:11] 2026-02-12 00:59:00,078 | INFO     | [monitor] cgroup control has ended
[2026-02-12 01:59:11] 2026-02-12 00:59:01,705 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140254080247616)>', '<ExcThread(monitor, started 140253398546176)>']
[2026-02-12 01:59:11] 2026-02-12 00:59:01,812 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 01:59:11] 2026-02-12 00:59:01,812 | INFO     | [monitor] control thread has ended
[2026-02-12 01:59:11] 2026-02-12 00:59:06,731 | INFO     | all workflow threads have been joined
[2026-02-12 01:59:11] 2026-02-12 00:59:06,731 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 01:59:11] 2026-02-12 00:59:06,731 | INFO     | traces error code: 0
[2026-02-12 01:59:11] 2026-02-12 00:59:06,731 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 01:59:11] 2026-02-12 00:59:07,053 [wrapper] ==== pilot stdout END ====
[2026-02-12 01:59:11] 2026-02-12 00:59:07,132 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 01:59:11] 2026-02-12 00:59:07,163 [wrapper] pilotpid: 27408
[2026-02-12 01:59:11] 2026-02-12 00:59:07,249 [wrapper] Pilot exit status: 0
[2026-02-12 01:59:11] 2026-02-12 00:59:07,729 [wrapper] pandaids: 7011510943
[2026-02-12 01:59:11] 2026-02-12 00:59:08,847 [wrapper] cleanup supervisor_pilot  9460 27409
[2026-02-12 01:59:11] 2026-02-12 00:59:08,932 [wrapper] Test setup, not cleaning
[2026-02-12 01:59:11] 2026-02-12 00:59:09,014 [wrapper] apfmon messages muted
[2026-02-12 01:59:11] 2026-02-12 00:59:09,140 [wrapper] ==== wrapper stdout END ====
[2026-02-12 01:59:11] 2026-02-12 00:59:09,240 [wrapper] ==== wrapper stderr END ====
[2026-02-12 01:59:11]  *** Error codes and diagnostics ***
[2026-02-12 01:59:11]     "exeErrorCode": 0,
[2026-02-12 01:59:11]     "exeErrorDiag": "",
[2026-02-12 01:59:11]     "pilotErrorCode": 0,
[2026-02-12 01:59:11]     "pilotErrorDiag": "",
[2026-02-12 01:59:11]  *** Listing of results directory ***
[2026-02-12 01:59:12] total 954284
[2026-02-12 01:59:12] -rw-r--r--. 1 boinc boinc    584627 Feb 11 04:39 pilot3.tar.gz
[2026-02-12 01:59:12] -rw-r--r--. 1 boinc boinc      5111 Feb 11 04:40 queuedata.json
[2026-02-12 01:59:12] -rwx------. 1 boinc boinc     36322 Feb 11 04:40 runpilot2-wrapper.sh
[2026-02-12 01:59:12] -rw-r--r--. 1 boinc boinc       100 Feb 11 19:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 01:59:12] -rwxr-xr-x. 1 boinc boinc      7986 Feb 11 19:43 run_atlas
[2026-02-12 01:59:12] -rw-r--r--. 1 boinc boinc       105 Feb 11 19:43 job.xml
[2026-02-12 01:59:12] -rw-r--r--. 1 boinc boinc      6392 Feb 11 19:43 init_data.xml
[2026-02-12 01:59:12] -rw-r--r--. 2 boinc boinc 680214772 Feb 11 19:43 EVNT.48431094._000634.pool.root.1
[2026-02-12 01:59:12] -rw-r--r--. 2 boinc boinc     15845 Feb 11 19:43 start_atlas.sh
[2026-02-12 01:59:12] drwxrwx--x. 2 boinc boinc        68 Feb 11 19:43 shared
[2026-02-12 01:59:12] -rw-r--r--. 2 boinc boinc    597957 Feb 11 19:43 input.tar.gz
[2026-02-12 01:59:12] -rw-r--r--. 1 boinc boinc         0 Feb 11 19:43 boinc_lockfile
[2026-02-12 01:59:12] -rw-r--r--. 1 boinc boinc      2556 Feb 11 19:43 pandaJob.out
[2026-02-12 01:59:12] -rw-------. 1 boinc boinc       415 Feb 11 19:48 workernode_map.json
[2026-02-12 01:59:12] -rw-------. 1 boinc boinc   1008152 Feb 11 19:48 agis_schedconf.cvmfs.json
[2026-02-12 01:59:12] drwx------. 5 boinc boinc      4096 Feb 11 19:48 pilot3
[2026-02-12 01:59:12] -rw-------. 1 boinc boinc 285639057 Feb 12 01:56 HITS.48431096._027427.pool.root.1
[2026-02-12 01:59:12] -rw-r--r--. 1 boinc boinc       531 Feb 12 01:56 boinc_task_state.xml
[2026-02-12 01:59:12] -rw-------. 1 boinc boinc      1012 Feb 12 01:58 memory_monitor_summary.json
[2026-02-12 01:59:12] -rw-------. 1 boinc boinc   1512955 Feb 12 01:58 agis_ddmendpoints.agis.ALL.json
[2026-02-12 01:59:12] -rw-------. 1 boinc boinc    595576 Feb 12 01:58 log.48431096._027427.job.log.tgz.1
[2026-02-12 01:59:12] -rw-------. 1 boinc boinc      6315 Feb 12 01:58 heartbeat.json
[2026-02-12 01:59:12] -rw-r--r--. 1 boinc boinc      8192 Feb 12 01:58 boinc_mmap_file
[2026-02-12 01:59:12] -rw-r--r--. 1 boinc boinc        28 Feb 12 01:58 wrapper_checkpoint.txt
[2026-02-12 01:59:12] -rw-------. 1 boinc boinc        95 Feb 12 01:58 pilot_heartbeat.json
[2026-02-12 01:59:12] -rw-------. 1 boinc boinc      5067 Feb 12 01:59 pilotlog.txt
[2026-02-12 01:59:12] -rw-------. 1 boinc boinc   3101935 Feb 12 01:59 log.48431096._027427.job.log.1
[2026-02-12 01:59:12] -rw-------. 1 boinc boinc       357 Feb 12 01:59 output.list
[2026-02-12 01:59:12] -rw-r--r--. 1 boinc boinc       620 Feb 12 01:59 runtime_log
[2026-02-12 01:59:12] -rw-------. 1 boinc boinc   3717120 Feb 12 01:59 result.tar.gz
[2026-02-12 01:59:12] -rw-------. 1 boinc boinc       657 Feb 12 01:59 VsoLDmnGGA9n9Rq4apOajLDm4fhM0noT9bVooX4SDmegiKDmRGFHGo.diag
[2026-02-12 01:59:12] -rw-r--r--. 1 boinc boinc      8832 Feb 12 01:59 runtime_log.err
[2026-02-12 01:59:12] -rw-r--r--. 1 boinc boinc     20734 Feb 12 01:59 stderr.txt
[2026-02-12 01:59:12] HITS file was successfully produced:
[2026-02-12 01:59:12] -rw-------. 1 boinc boinc 285639057 Feb 12 01:56 shared/HITS.pool.root.1
[2026-02-12 01:59:12]  *** Contents of shared directory: ***
[2026-02-12 01:59:12] total 947456
[2026-02-12 01:59:12] -rw-r--r--. 2 boinc boinc 680214772 Feb 11 19:43 ATLAS.root_0
[2026-02-12 01:59:12] -rw-r--r--. 2 boinc boinc     15845 Feb 11 19:43 start_atlas.sh
[2026-02-12 01:59:12] -rw-r--r--. 2 boinc boinc    597957 Feb 11 19:43 input.tar.gz
[2026-02-12 01:59:12] -rw-------. 1 boinc boinc 285639057 Feb 12 01:56 HITS.pool.root.1
[2026-02-12 01:59:12] -rw-------. 1 boinc boinc   3717120 Feb 12 01:59 result.tar.gz
01:59:13 (23631): run_atlas exited; CPU time 87042.270248
01:59:13 (23631): called boinc_finish(0)

</stderr_txt>
]]>

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