Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
12:28:09 (8359): wrapper (7.7.26015): starting
12:28:09 (8359): wrapper: running run_atlas (--nthreads 8)
[2026-02-11 12:28:09] Arguments: --nthreads 8
[2026-02-11 12:28:09] Threads: 8
[2026-02-11 12:28:09] Checking for CVMFS
[2026-02-11 12:28:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 12:28:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 12:28:09] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 12:28:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 12:28:09] 2.11.0.0 24859 176503 90388 156114 1 188 3549217 4096001 908 130560 7 18687764 99.700 11147425 446 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-02-11 12:28:09] CVMFS is ok
[2026-02-11 12:28:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-11 12:28:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-11 12:28:09] Further information can be found at the LHC@home message board.
[2026-02-11 12:28:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 12:28:09] Checking for apptainer binary...
[2026-02-11 12:28:09] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-02-11 12:28:09] apptainer is not installed, using version from CVMFS
[2026-02-11 12:28:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 12:28:09] WARNING: Environment variable TMPDIR already has value [/tmp/job_11088095/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node313
[2026-02-11 12:28:09] apptainer works
[2026-02-11 12:28:09] Set ATHENA_PROC_NUMBER=8
[2026-02-11 12:28:09] Set ATHENA_CORE_NUMBER=8
[2026-02-11 12:28:09] Starting ATLAS job with PandaID=7007444528
[2026-02-11 12:28:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11088095/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-11 13:13:29]  *** The last 200 lines of the pilot log: ***
[2026-02-11 13:13:29]  is_altstaged=None
[2026-02-11 13:13:29]  is_tar=False
[2026-02-11 13:13:29]  lfn=log.48442031._008282.job.log.tgz.1
[2026-02-11 13:13:29]  mtime=0
[2026-02-11 13:13:29]  protocol_id=None
[2026-02-11 13:13:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-11 13:13:29]  replicas=None
[2026-02-11 13:13:29]  scope=mc23_13p6TeV
[2026-02-11 13:13:29]  status=None
[2026-02-11 13:13:29]  status_code=0
[2026-02-11 13:13:29]  storage_token=
[2026-02-11 13:13:29]  surl=/tmp/job_11088095/atlas/pilot/slots/0/PanDA_Pilot-7007444528/log.48442031._008282.job.log.tgz.1
[2026-02-11 13:13:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/3c/log.48442031._008282.job.log.tgz.1
[2026-02-11 13:13:29]  workdir=None
[2026-02-11 13:13:29] ]
[2026-02-11 13:13:29] 2026-02-11 12:12:23,972 | INFO     | transferring file log.48442031._008282.job.log.tgz.1 from /tmp/job_11088095/atlas/pilot/slots/0/PanDA_Pilot-7007444528/log.48442031._008282.job.log.tgz.1 to /tmp/j
[2026-02-11 13:13:29] 2026-02-11 12:12:23,972 | INFO     | executing command: /usr/bin/env mv /tmp/job_11088095/atlas/pilot/slots/0/PanDA_Pilot-7007444528/log.48442031._008282.job.log.tgz.1 /tmp/job_11088095/atlas/pilot/sl
[2026-02-11 13:13:29] 2026-02-11 12:12:23,979 | INFO     | adding to output.list: log.48442031._008282.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/3c/log.48442031._008282.job.log.tg
[2026-02-11 13:13:29] 2026-02-11 12:12:23,979 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-11 13:13:29] 2026-02-11 12:12:23,979 | INFO     | summary of transferred files:
[2026-02-11 13:13:29] 2026-02-11 12:12:23,979 | INFO     |  -- lfn=log.48442031._008282.job.log.tgz.1, status_code=0, status=transferred
[2026-02-11 13:13:29] 2026-02-11 12:12:23,980 | INFO     | stage-out finished correctly
[2026-02-11 13:13:29] 2026-02-11 12:12:24,697 | INFO     | time since job start (2646s) is within the limit (349056.0s)
[2026-02-11 13:13:29] 2026-02-11 12:12:25,046 | INFO     | monitor loop #202: job 0:7007444528 is in state 'finished'
[2026-02-11 13:13:29] 2026-02-11 12:12:25,047 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-11 13:13:29] 2026-02-11 12:12:26,702 | INFO     | time since job start (2648s) is within the limit (349056.0s)
[2026-02-11 13:13:29] 2026-02-11 12:12:27,269 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-11 13:13:29] 2026-02-11 12:12:27,549 | INFO     | monitor loop #203: job 0:7007444528 is in state 'finished'
[2026-02-11 13:13:29] 2026-02-11 12:12:27,549 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-11 13:13:29] 2026-02-11 12:12:27,772 | INFO     | job 7007444528 has state=finished
[2026-02-11 13:13:29] 2026-02-11 12:12:27,772 | INFO     | preparing for final server update for job 7007444528 in state='finished'
[2026-02-11 13:13:29] 2026-02-11 12:12:27,772 | INFO     | reading metadata from: /tmp/job_11088095/atlas/pilot/slots/0/PanDA_Pilot-7007444528/jobReport.json
[2026-02-11 13:13:29] 2026-02-11 12:12:27,773 | INFO     | added worker_node to metadata from /tmp/job_11088095/atlas/pilot/slots/0/workernode_map.json
[2026-02-11 13:13:29] 2026-02-11 12:12:27,774 | INFO     | this job has now completed (state=finished)
[2026-02-11 13:13:29] 2026-02-11 12:12:27,774 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-11 13:13:29] 2026-02-11 12:12:27,774 | INFO     | log transfer has been attempted: DONE
[2026-02-11 13:13:29] 2026-02-11 12:12:27,774 | INFO     | job 7007444528 has finished - writing final server update
[2026-02-11 13:13:29] 2026-02-11 12:12:27,774 | INFO     | total number of processed events: 400 (read)
[2026-02-11 13:13:29] 2026-02-11 12:12:27,791 | INFO     | using path: /tmp/job_11088095/atlas/pilot/slots/0/PanDA_Pilot-7007444528/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 13:13:29] 2026-02-11 12:12:27,792 | INFO     | extracted standard info from prmon json
[2026-02-11 13:13:29] 2026-02-11 12:12:27,792 | INFO     | extracted standard memory fields from prmon json
[2026-02-11 13:13:29] 2026-02-11 12:12:27,792 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-11 13:13:29] 2026-02-11 12:12:27,792 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-11 13:13:29] 2026-02-11 12:12:27,792 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-11 13:13:29] 2026-02-11 12:12:27,792 | INFO     | fitting pss+swap vs Time
[2026-02-11 13:13:29] 2026-02-11 12:12:27,793 | INFO     | sum of square deviations: 15695178.0
[2026-02-11 13:13:29] 2026-02-11 12:12:27,793 | INFO     | sum of deviations: 174937752.00000003
[2026-02-11 13:13:29] 2026-02-11 12:12:27,793 | INFO     | mean x: 1770810718.0
[2026-02-11 13:13:29] 2026-02-11 12:12:27,793 | INFO     | mean y: 2666102.378378378
[2026-02-11 13:13:29] 2026-02-11 12:12:27,793 | INFO     | intersect: -19734710958.552437
[2026-02-11 13:13:29] 2026-02-11 12:12:27,793 | INFO     | chi2: 7.195441667050273e-05
[2026-02-11 13:13:29] 2026-02-11 12:12:27,793 | INFO     | current memory leak: 11.15 B/s (using 37 data points, chi2=0.00)
[2026-02-11 13:13:29] 2026-02-11 12:12:27,793 | INFO     | could have reported an average CPU frequency of 2396 MHz (5 samples)
[2026-02-11 13:13:29] 2026-02-11 12:12:27,793 | INFO     | ..............................
[2026-02-11 13:13:29] 2026-02-11 12:12:27,793 | INFO     | . Timing measurements:
[2026-02-11 13:13:29] 2026-02-11 12:12:27,793 | INFO     | . get job = 0 s
[2026-02-11 13:13:29] 2026-02-11 12:12:27,793 | INFO     | . initial setup = 2 s
[2026-02-11 13:13:29] 2026-02-11 12:12:27,793 | INFO     | . payload setup = 2 s
[2026-02-11 13:13:29] 2026-02-11 12:12:27,793 | INFO     | . stage-in = 0 s
[2026-02-11 13:13:29] 2026-02-11 12:12:27,793 | INFO     | . payload execution = 2627 s
[2026-02-11 13:13:29] 2026-02-11 12:12:27,793 | INFO     | . stage-out = 0 s
[2026-02-11 13:13:29] 2026-02-11 12:12:27,793 | INFO     | . log creation = 0 s
[2026-02-11 13:13:29] 2026-02-11 12:12:27,794 | INFO     | ..............................
[2026-02-11 13:13:29] 2026-02-11 12:12:27,841 | INFO     | 
[2026-02-11 13:13:29] 2026-02-11 12:12:27,841 | INFO     | job summary report
[2026-02-11 13:13:29] 2026-02-11 12:12:27,841 | INFO     | --------------------------------------------------
[2026-02-11 13:13:29] 2026-02-11 12:12:27,841 | INFO     | PanDA job id: 7007444528
[2026-02-11 13:13:29] 2026-02-11 12:12:27,841 | INFO     | task id: 48442031
[2026-02-11 13:13:29] 2026-02-11 12:12:27,841 | INFO     | errors: (none)
[2026-02-11 13:13:29] 2026-02-11 12:12:27,841 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-11 13:13:29] 2026-02-11 12:12:27,841 | INFO     | pilot state: finished 
[2026-02-11 13:13:29] 2026-02-11 12:12:27,841 | INFO     | transexitcode: 0
[2026-02-11 13:13:29] 2026-02-11 12:12:27,841 | INFO     | exeerrorcode: 0
[2026-02-11 13:13:29] 2026-02-11 12:12:27,841 | INFO     | exeerrordiag: 
[2026-02-11 13:13:29] 2026-02-11 12:12:27,841 | INFO     | exitcode: 0
[2026-02-11 13:13:29] 2026-02-11 12:12:27,842 | INFO     | exitmsg: OK
[2026-02-11 13:13:29] 2026-02-11 12:12:27,842 | INFO     | cpuconsumptiontime: 19243 s
[2026-02-11 13:13:29] 2026-02-11 12:12:27,842 | INFO     | nevents: 400
[2026-02-11 13:13:29] 2026-02-11 12:12:27,842 | INFO     | neventsw: 0
[2026-02-11 13:13:29] 2026-02-11 12:12:27,842 | INFO     | pid: 16679
[2026-02-11 13:13:29] 2026-02-11 12:12:27,842 | INFO     | pgrp: 16679
[2026-02-11 13:13:29] 2026-02-11 12:12:27,842 | INFO     | corecount: 8
[2026-02-11 13:13:29] 2026-02-11 12:12:27,842 | INFO     | event service: False
[2026-02-11 13:13:29] 2026-02-11 12:12:27,842 | INFO     | sizes: {0: 2252530, 1: 2282328, 11: 2282328, 2633: 2307642, 2634: 2316670, 2638: 2317080}
[2026-02-11 13:13:29] 2026-02-11 12:12:27,842 | INFO     | --------------------------------------------------
[2026-02-11 13:13:29] 2026-02-11 12:12:27,842 | INFO     | 
[2026-02-11 13:13:29] 2026-02-11 12:12:27,842 | INFO     | executing command: ls -lF /tmp/job_11088095/atlas/pilot/slots/0
[2026-02-11 13:13:29] 2026-02-11 12:12:27,851 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-11 13:13:29] 2026-02-11 12:12:27,851 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-11 13:13:29] 2026-02-11 12:12:27,851 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-11 13:13:29] 2026-02-11 12:12:27,851 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-11 13:13:29] 2026-02-11 12:12:27,852 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-11 13:13:29] 2026-02-11 12:12:27,852 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-11 13:13:29] 2026-02-11 12:12:27,852 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-11 13:13:29] 2026-02-11 12:12:27,852 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-11 13:13:29] 2026-02-11 12:12:27,852 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-11 13:13:29] 2026-02-11 12:12:27,852 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-11 13:13:29] 2026-02-11 12:12:27,852 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-11 13:13:29] 2026-02-11 12:12:27,852 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-11 13:13:29] 2026-02-11 12:12:27,852 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-11 13:13:29] 2026-02-11 12:12:27,852 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-11 13:13:29] 2026-02-11 12:12:27,852 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-11 13:13:29] 2026-02-11 12:12:27,852 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-11 13:13:29] 2026-02-11 12:12:27,852 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-11 13:13:29] 2026-02-11 12:12:27,852 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-11 13:13:29] 2026-02-11 12:12:27,852 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-11 13:13:29] 2026-02-11 12:12:27,852 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-11 13:13:29] 2026-02-11 12:12:27,852 | INFO     | job 7007444528 has completed (purged errors)
[2026-02-11 13:13:29] 2026-02-11 12:12:27,852 | INFO     | overall cleanup function is called
[2026-02-11 13:13:29] 2026-02-11 12:12:28,858 | INFO     | --- collectZombieJob: --- 10, [16679]
[2026-02-11 13:13:29] 2026-02-11 12:12:28,858 | INFO     | zombie collector waiting for pid 16679
[2026-02-11 13:13:29] 2026-02-11 12:12:28,858 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-11 13:13:29] 2026-02-11 12:12:28,859 | INFO     | collected zombie processes
[2026-02-11 13:13:29] 2026-02-11 12:12:28,859 | INFO     | will attempt to kill all subprocesses of pid=16679
[2026-02-11 13:13:29] 2026-02-11 12:12:28,955 | INFO     | process IDs to be killed: [16679] (in reverse order)
[2026-02-11 13:13:29] 2026-02-11 12:12:28,988 | WARNING  | found no corresponding commands to process id(s)
[2026-02-11 13:13:29] 2026-02-11 12:12:28,988 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-11 13:13:29] 2026-02-11 12:12:28,992 | INFO     | did not find any defunct processes belonging to 16679
[2026-02-11 13:13:29] 2026-02-11 12:12:28,995 | INFO     | did not find any defunct processes belonging to 16679
[2026-02-11 13:13:29] 2026-02-11 12:12:28,995 | INFO     | ready for new job
[2026-02-11 13:13:29] 2026-02-11 12:12:28,995 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-11 13:13:29] 2026-02-11 12:12:28,995 | INFO     | **************************************
[2026-02-11 13:13:29] 2026-02-11 12:12:28,995 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-11 13:13:29] 2026-02-11 12:12:28,996 | INFO     | **************************************
[2026-02-11 13:13:29] 2026-02-11 12:12:28,996 | INFO     | 
[2026-02-11 13:13:29] 2026-02-11 12:12:29,009 | INFO     | architecture information:
[2026-02-11 13:13:29] 2026-02-11 12:12:29,009 | INFO     | executing command: cat /etc/os-release
[2026-02-11 13:13:29] 2026-02-11 12:12:29,015 | INFO     | cat /etc/os-release:
[2026-02-11 13:13:29] NAME="CentOS Linux"
[2026-02-11 13:13:29] VERSION="7 (Core)"
[2026-02-11 13:13:29] ID="centos"
[2026-02-11 13:13:29] ID_LIKE="rhel fedora"
[2026-02-11 13:13:29] VERSION_ID="7"
[2026-02-11 13:13:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-11 13:13:29] ANSI_COLOR="0;31"
[2026-02-11 13:13:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-11 13:13:29] HOME_URL="https://www.centos.org/"
[2026-02-11 13:13:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-11 13:13:29] 
[2026-02-11 13:13:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-11 13:13:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-11 13:13:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-11 13:13:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-11 13:13:29] 
[2026-02-11 13:13:29] 2026-02-11 12:12:29,015 | INFO     | **************************************
[2026-02-11 13:13:29] 2026-02-11 12:12:29,518 | INFO     | executing command: df -mP /tmp/job_11088095/atlas/pilot/slots/0
[2026-02-11 13:13:29] 2026-02-11 12:12:29,523 | INFO     | sufficient remaining disk space (220629827584 B)
[2026-02-11 13:13:29] 2026-02-11 12:12:29,523 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-11 13:13:29] 2026-02-11 12:12:29,523 | INFO     | current server update state: UPDATING_FINAL
[2026-02-11 13:13:29] 2026-02-11 12:12:29,523 | INFO     | update_server=False
[2026-02-11 13:13:29] 2026-02-11 12:12:29,523 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-11 13:13:29] 2026-02-11 12:12:29,524 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-11 13:13:29] 2026-02-11 12:12:29,524 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-11 13:13:29] 2026-02-11 12:12:29,524 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-11 13:13:29] 2026-02-11 12:12:29,524 | INFO     | aborting loop
[2026-02-11 13:13:29] 2026-02-11 12:12:29,535 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-11 13:13:29] 2026-02-11 12:12:30,090 | INFO     | all payload control threads have been joined
[2026-02-11 13:13:29] 2026-02-11 12:12:30,145 | INFO     | all job control threads have been joined
[2026-02-11 13:13:29] 2026-02-11 12:12:30,502 | INFO     | all data control threads have been joined
[2026-02-11 13:13:29] 2026-02-11 12:12:30,529 | INFO     | [job] retrieve thread has finished
[2026-02-11 13:13:29] 2026-02-11 12:12:30,529 | INFO     | [job] queue monitor thread has finished
[2026-02-11 13:13:29] 2026-02-11 12:12:30,529 | INFO     | [job] job monitor thread has finished
[2026-02-11 13:13:29] 2026-02-11 12:12:30,931 | INFO     | [payload] failed_post thread has finished
[2026-02-11 13:13:29] 2026-02-11 12:12:31,095 | INFO     | [payload] control thread has finished
[2026-02-11 13:13:29] 2026-02-11 12:12:31,150 | INFO     | [job] control thread has finished
[2026-02-11 13:13:29] 2026-02-11 12:12:31,155 | INFO     | [payload] execute_payloads thread has finished
[2026-02-11 13:13:29] 2026-02-11 12:12:31,344 | INFO     | [job] validate thread has finished
[2026-02-11 13:13:29] 2026-02-11 12:12:31,489 | INFO     | [data] copytool_in thread has finished
[2026-02-11 13:13:29] 2026-02-11 12:12:31,489 | INFO     | [payload] validate_pre thread has finished
[2026-02-11 13:13:29] 2026-02-11 12:12:31,489 | INFO     | [job] create_data_payload thread has finished
[2026-02-11 13:13:29] 2026-02-11 12:12:31,507 | INFO     | [data] control thread has finished
[2026-02-11 13:13:29] 2026-02-11 12:12:31,540 | INFO     | [data] copytool_out thread has finished
[2026-02-11 13:13:29] 2026-02-11 12:12:31,967 | INFO     | [payload] validate_post thread has finished
[2026-02-11 13:13:29] 2026-02-11 12:12:33,530 | INFO     | [data] queue_monitor thread has finished
[2026-02-11 13:13:29] 2026-02-11 12:12:40,574 | INFO     | job.realtimelogging is not enabled
[2026-02-11 13:13:29] 2026-02-11 12:12:41,580 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-11 13:13:29] 2026-02-11 12:12:59,883 | INFO     | PID=12133 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-11 13:13:29] 2026-02-11 12:12:59,883 | INFO     | .. there are 3 such processes running
[2026-02-11 13:13:29] 2026-02-11 12:12:59,883 | INFO     | found 0 job(s) in 20 queues
[2026-02-11 13:13:29] 2026-02-11 12:12:59,883 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-11 13:13:29] 2026-02-11 12:12:59,883 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-11 13:13:29] 2026-02-11 12:13:16,257 [wrapper] supervise_pilot (15 min periods counter: 4)
[2026-02-11 13:13:29] 2026-02-11 12:13:22,780 | INFO     | [monitor] cgroup control has ended
[2026-02-11 13:13:29] 2026-02-11 12:13:24,298 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-02-11 13:13:29] 2026-02-11 12:13:25,007 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-11 13:13:29] 2026-02-11 12:13:25,007 | INFO     | [monitor] control thread has ended
[2026-02-11 13:13:29] 2026-02-11 12:13:29,300 | INFO     | all workflow threads have been joined
[2026-02-11 13:13:29] 2026-02-11 12:13:29,301 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-11 13:13:29] 2026-02-11 12:13:29,301 | INFO     | traces error code: 0
[2026-02-11 13:13:29] 2026-02-11 12:13:29,301 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-11 13:13:29] 2026-02-11 12:13:29,359 [wrapper] ==== pilot stdout END ====
[2026-02-11 13:13:29] 2026-02-11 12:13:29,360 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-11 13:13:29] 2026-02-11 12:13:29,361 [wrapper] pilotpid: 12133
[2026-02-11 13:13:29] 2026-02-11 12:13:29,362 [wrapper] Pilot exit status: 0
[2026-02-11 13:13:29] 2026-02-11 12:13:29,366 [wrapper] pandaids: 7007444528
[2026-02-11 13:13:29] 2026-02-11 12:13:29,391 [wrapper] cleanup supervisor_pilot 23142 12134
[2026-02-11 13:13:29] 2026-02-11 12:13:29,392 [wrapper] Test setup, not cleaning
[2026-02-11 13:13:29] 2026-02-11 12:13:29,394 [wrapper] apfmon messages muted
[2026-02-11 13:13:29] 2026-02-11 12:13:29,395 [wrapper] ==== wrapper stdout END ====
[2026-02-11 13:13:29] 2026-02-11 12:13:29,396 [wrapper] ==== wrapper stderr END ====
[2026-02-11 13:13:29]  *** Error codes and diagnostics ***
[2026-02-11 13:13:29]     "exeErrorCode": 0,
[2026-02-11 13:13:29]     "exeErrorDiag": "",
[2026-02-11 13:13:29]     "pilotErrorCode": 0,
[2026-02-11 13:13:29]     "pilotErrorDiag": "",
[2026-02-11 13:13:29]  *** Listing of results directory ***
[2026-02-11 13:13:29] total 672040
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user    584627 Feb 10 11:23 pilot3.tar.gz
[2026-02-11 13:13:29] -rwx------ 1 mf493845 unix-user     36322 Feb 10 11:24 runpilot2-wrapper.sh
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user      5111 Feb 10 11:25 queuedata.json
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user       100 Feb 11 10:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-11 13:13:29] -rwxr-xr-x 1 mf493845 unix-user      7986 Feb 11 10:21 run_atlas
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user       105 Feb 11 10:21 job.xml
[2026-02-11 13:13:29] -rw-r--r-- 2 mf493845 unix-user 499314127 Feb 11 12:28 EVNT.48442027._000142.pool.root.1
[2026-02-11 13:13:29] -rw-r--r-- 2 mf493845 unix-user     15845 Feb 11 12:28 start_atlas.sh
[2026-02-11 13:13:29] drwxrwx--x 2 mf493845 unix-user       100 Feb 11 12:28 shared
[2026-02-11 13:13:29] -rw-r--r-- 2 mf493845 unix-user    597957 Feb 11 12:28 input.tar.gz
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user      6389 Feb 11 12:28 init_data.xml
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user         0 Feb 11 12:28 boinc_setup_complete
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user      8192 Feb 11 12:28 boinc_mmap_file
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user         0 Feb 11 12:28 boinc_lockfile
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user      2529 Feb 11 12:28 pandaJob.out
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user   1009239 Feb 11 12:28 agis_schedconf.cvmfs.json
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user   1512955 Feb 11 12:28 agis_ddmendpoints.agis.ALL.json
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user       416 Feb 11 12:28 workernode_map.json
[2026-02-11 13:13:29] drwx------ 5 mf493845 unix-user       440 Feb 11 12:28 pilot3
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user 183465243 Feb 11 13:12 HITS.48442031._008282.pool.root.1
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user      1023 Feb 11 13:12 memory_monitor_summary.json
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user    313064 Feb 11 13:12 log.48442031._008282.job.log.tgz.1
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user      6296 Feb 11 13:12 heartbeat.json
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user        95 Feb 11 13:12 pilot_heartbeat.json
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user      4903 Feb 11 13:13 pilotlog.txt
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user    425730 Feb 11 13:13 log.48442031._008282.job.log.1
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user       357 Feb 11 13:13 output.list
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user       620 Feb 11 13:13 runtime_log
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user    757760 Feb 11 13:13 result.tar.gz
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user      9219 Feb 11 13:13 runtime_log.err
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user       638 Feb 11 13:13 lpGLDm65z98n9Rq4apOajLDm4fhM0noT9bVooX4SDmLBhKDmmq7v1m.diag
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user     21954 Feb 11 13:13 stderr.txt
[2026-02-11 13:13:29] HITS file was successfully produced:
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user 183465243 Feb 11 13:12 shared/HITS.pool.root.1
[2026-02-11 13:13:29]  *** Contents of shared directory: ***
[2026-02-11 13:13:29] total 668120
[2026-02-11 13:13:29] -rw-r--r-- 2 mf493845 unix-user 499314127 Feb 11 12:28 ATLAS.root_0
[2026-02-11 13:13:29] -rw-r--r-- 2 mf493845 unix-user     15845 Feb 11 12:28 start_atlas.sh
[2026-02-11 13:13:29] -rw-r--r-- 2 mf493845 unix-user    597957 Feb 11 12:28 input.tar.gz
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user 183465243 Feb 11 13:12 HITS.pool.root.1
[2026-02-11 13:13:29] -rw------- 1 mf493845 unix-user    757760 Feb 11 13:13 result.tar.gz
13:13:31 (8359): run_atlas exited; CPU time 19275.245693
13:13:31 (8359): called boinc_finish(0)

</stderr_txt>
]]>

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