Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
04:40:49 (3006113): wrapper (7.7.26015): starting
04:40:49 (3006113): wrapper: running run_atlas (--nthreads 12)
[2026-02-11 04:40:49] Arguments: --nthreads 12
[2026-02-11 04:40:49] Threads: 12
[2026-02-11 04:40:49] Checking for CVMFS
[2026-02-11 04:40:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 04:40:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 04:40:49] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 04:40:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 04:40:49] 2.13.2.0 2657 5287 57556 156112 2 50 10038194 16777216 916 130560 0 8787719 99.996 139118 747 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2026-02-11 04:40:49] CVMFS is ok
[2026-02-11 04:40:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 04:40:49] Checking for apptainer binary...
[2026-02-11 04:40:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-11 04:40:49] Running /usr/bin/apptainer --version
[2026-02-11 04:40:50] apptainer version 1.3.0-bp160.1.36
[2026-02-11 04:40:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 04:40:50] boinc-runner
[2026-02-11 04:40:50] apptainer works
[2026-02-11 04:40:50] Set ATHENA_PROC_NUMBER=12
[2026-02-11 04:40:50] Set ATHENA_CORE_NUMBER=12
[2026-02-11 04:40:50] Starting ATLAS job with PandaID=7010053166
[2026-02-11 04:40:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-11 05:18:13]  *** The last 200 lines of the pilot log: ***
[2026-02-11 05:18:13]  workdir=None
[2026-02-11 05:18:13] ]
[2026-02-11 05:18:13] 2026-02-11 11:17:52,600 | INFO     | transferring file log.48431096._023182.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-7010053166/log.48431096._023182.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-02-11 05:18:13] 2026-02-11 11:17:52,600 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-7010053166/log.48431096._023182.job.log.tgz.1 /var/lib/boinc/slots/2/log.48431096._023182.job
[2026-02-11 05:18:13] 2026-02-11 11:17:52,607 | INFO     | adding to output.list: log.48431096._023182.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/52/log.48431096._023182.job.log.tg
[2026-02-11 05:18:13] 2026-02-11 11:17:52,608 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-11 05:18:13] 2026-02-11 11:17:52,608 | INFO     | summary of transferred files:
[2026-02-11 05:18:13] 2026-02-11 11:17:52,608 | INFO     |  -- lfn=log.48431096._023182.job.log.tgz.1, status_code=0, status=transferred
[2026-02-11 05:18:13] 2026-02-11 11:17:52,608 | INFO     | stage-out finished correctly
[2026-02-11 05:18:13] 2026-02-11 11:17:54,066 | WARNING  | process 3014532 can no longer be monitored (due to stat problems) - aborting
[2026-02-11 05:18:13] 2026-02-11 11:17:54,066 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-7010053166/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 05:18:13] 2026-02-11 11:17:54,067 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-7010053166/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 05:18:13] 2026-02-11 11:17:54,067 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-11 05:18:13] 2026-02-11 11:17:54,067 | WARNING  | maxPSS not found in memory monitor output
[2026-02-11 05:18:13] 2026-02-11 11:17:54,067 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 5530947 B
[2026-02-11 05:18:13] 2026-02-11 11:17:54,067 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16807 B
[2026-02-11 05:18:13] 2026-02-11 11:17:54,067 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-02-11 05:18:13] 2026-02-11 11:17:54,072 | INFO     | sufficient remaining disk space (3858677891072 B)
[2026-02-11 05:18:13] 2026-02-11 11:17:54,073 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-02-11 05:18:13] 2026-02-11 11:17:54,073 | INFO     | size of work directory /var/lib/boinc/slots/2/PanDA_Pilot-7010053166: 5814575 B (within 5033164800 B limit)
[2026-02-11 05:18:13] 2026-02-11 11:17:54,073 | INFO     | pfn file=/var/lib/boinc/slots/2/PanDA_Pilot-7010053166/HITS.48431096._023182.pool.root.1 does not exist (skip from workdir size calculation)
[2026-02-11 05:18:13] 2026-02-11 11:17:54,073 | INFO     | total size of present files: 0 B (workdir size: 5814575 B)
[2026-02-11 05:18:13] 2026-02-11 11:17:54,073 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/2/PanDA_Pilot-7010053166/HITS.48431096._023182.pool.root.1 since it does not exist
[2026-02-11 05:18:13] 2026-02-11 11:17:54,114 | INFO     | number of running child processes to parent process 3014532: 1
[2026-02-11 05:18:13] 2026-02-11 11:17:54,115 | INFO     | maximum number of monitored processes: 6
[2026-02-11 05:18:13] 2026-02-11 11:17:54,484 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-11 05:18:13] 2026-02-11 11:17:54,533 | INFO     | time since job start (2213s) is within the limit (349056.0s)
[2026-02-11 05:18:13] 2026-02-11 11:17:54,750 | INFO     | job 7010053166 has state=finished
[2026-02-11 05:18:13] 2026-02-11 11:17:54,750 | INFO     | preparing for final server update for job 7010053166 in state='finished'
[2026-02-11 05:18:13] 2026-02-11 11:17:54,750 | INFO     | reading metadata from: /var/lib/boinc/slots/2/PanDA_Pilot-7010053166/jobReport.json
[2026-02-11 05:18:13] 2026-02-11 11:17:54,752 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/2/workernode_map.json
[2026-02-11 05:18:13] 2026-02-11 11:17:54,752 | INFO     | this job has now completed (state=finished)
[2026-02-11 05:18:13] 2026-02-11 11:17:54,752 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-11 05:18:13] 2026-02-11 11:17:54,752 | INFO     | log transfer has been attempted: DONE
[2026-02-11 05:18:13] 2026-02-11 11:17:54,752 | INFO     | job 7010053166 has finished - writing final server update
[2026-02-11 05:18:13] 2026-02-11 11:17:54,752 | INFO     | total number of processed events: 400 (read)
[2026-02-11 05:18:13] 2026-02-11 11:17:54,755 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-7010053166/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 05:18:13] 2026-02-11 11:17:54,755 | INFO     | extracted standard info from prmon json
[2026-02-11 05:18:13] 2026-02-11 11:17:54,755 | INFO     | extracted standard memory fields from prmon json
[2026-02-11 05:18:13] 2026-02-11 11:17:54,755 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-11 05:18:13] 2026-02-11 11:17:54,755 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-11 05:18:13] 2026-02-11 11:17:54,755 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-11 05:18:13] 2026-02-11 11:17:54,756 | INFO     | fitting pss+swap vs Time
[2026-02-11 05:18:13] 2026-02-11 11:17:54,756 | INFO     | sum of square deviations: 7553630.0
[2026-02-11 05:18:13] 2026-02-11 11:17:54,756 | INFO     | sum of deviations: -1037519476.0000001
[2026-02-11 05:18:13] 2026-02-11 11:17:54,756 | INFO     | mean x: 1770807636.0
[2026-02-11 05:18:13] 2026-02-11 11:17:54,756 | INFO     | mean y: 2971534.827586207
[2026-02-11 05:18:13] 2026-02-11 11:17:54,756 | INFO     | intersect: 243230057134.66754
[2026-02-11 05:18:13] 2026-02-11 11:17:54,756 | INFO     | chi2: 0.010398826696340933
[2026-02-11 05:18:13] 2026-02-11 11:17:54,756 | INFO     | current memory leak: -137.35 B/s (using 29 data points, chi2=0.01)
[2026-02-11 05:18:13] 2026-02-11 11:17:54,756 | INFO     | could have reported an average CPU frequency of 4296 MHz (5 samples)
[2026-02-11 05:18:13] 2026-02-11 11:17:54,756 | INFO     | ..............................
[2026-02-11 05:18:13] 2026-02-11 11:17:54,756 | INFO     | . Timing measurements:
[2026-02-11 05:18:13] 2026-02-11 11:17:54,757 | INFO     | . get job = 0 s
[2026-02-11 05:18:13] 2026-02-11 11:17:54,757 | INFO     | . initial setup = 5 s
[2026-02-11 05:18:13] 2026-02-11 11:17:54,757 | INFO     | . payload setup = 2 s
[2026-02-11 05:18:13] 2026-02-11 11:17:54,757 | INFO     | . stage-in = 0 s
[2026-02-11 05:18:13] 2026-02-11 11:17:54,757 | INFO     | . payload execution = 2196 s
[2026-02-11 05:18:13] 2026-02-11 11:17:54,757 | INFO     | . stage-out = 0 s
[2026-02-11 05:18:13] 2026-02-11 11:17:54,757 | INFO     | . log creation = 0 s
[2026-02-11 05:18:13] 2026-02-11 11:17:54,757 | INFO     | ..............................
[2026-02-11 05:18:13] 2026-02-11 11:17:54,796 | INFO     | 
[2026-02-11 05:18:13] 2026-02-11 11:17:54,796 | INFO     | job summary report
[2026-02-11 05:18:13] 2026-02-11 11:17:54,796 | INFO     | --------------------------------------------------
[2026-02-11 05:18:13] 2026-02-11 11:17:54,796 | INFO     | PanDA job id: 7010053166
[2026-02-11 05:18:13] 2026-02-11 11:17:54,796 | INFO     | task id: 48431096
[2026-02-11 05:18:13] 2026-02-11 11:17:54,796 | INFO     | errors: (none)
[2026-02-11 05:18:13] 2026-02-11 11:17:54,796 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-11 05:18:13] 2026-02-11 11:17:54,796 | INFO     | pilot state: finished 
[2026-02-11 05:18:13] 2026-02-11 11:17:54,796 | INFO     | transexitcode: 0
[2026-02-11 05:18:13] 2026-02-11 11:17:54,796 | INFO     | exeerrorcode: 0
[2026-02-11 05:18:13] 2026-02-11 11:17:54,796 | INFO     | exeerrordiag: 
[2026-02-11 05:18:13] 2026-02-11 11:17:54,796 | INFO     | exitcode: 0
[2026-02-11 05:18:13] 2026-02-11 11:17:54,796 | INFO     | exitmsg: OK
[2026-02-11 05:18:13] 2026-02-11 11:17:54,796 | INFO     | cpuconsumptiontime: 24438 s
[2026-02-11 05:18:13] 2026-02-11 11:17:54,796 | INFO     | nevents: 400
[2026-02-11 05:18:13] 2026-02-11 11:17:54,796 | INFO     | neventsw: 0
[2026-02-11 05:18:13] 2026-02-11 11:17:54,796 | INFO     | pid: 3014532
[2026-02-11 05:18:13] 2026-02-11 11:17:54,796 | INFO     | pgrp: 3014532
[2026-02-11 05:18:13] 2026-02-11 11:17:54,796 | INFO     | corecount: 12
[2026-02-11 05:18:13] 2026-02-11 11:17:54,796 | INFO     | event service: False
[2026-02-11 05:18:13] 2026-02-11 11:17:54,796 | INFO     | sizes: {0: 2282215, 10: 2282215, 2198: 2307347, 2200: 2316345, 2201: 2316429, 2202: 2316655}
[2026-02-11 05:18:13] 2026-02-11 11:17:54,796 | INFO     | --------------------------------------------------
[2026-02-11 05:18:13] 2026-02-11 11:17:54,796 | INFO     | 
[2026-02-11 05:18:13] 2026-02-11 11:17:54,797 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-02-11 05:18:13] 2026-02-11 11:17:54,806 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-11 05:18:13] 2026-02-11 11:17:54,807 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-11 05:18:13] 2026-02-11 11:17:54,807 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-11 05:18:13] 2026-02-11 11:17:54,807 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-11 05:18:13] 2026-02-11 11:17:54,807 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-11 05:18:13] 2026-02-11 11:17:54,807 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-11 05:18:13] 2026-02-11 11:17:54,807 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-11 05:18:13] 2026-02-11 11:17:54,807 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-11 05:18:13] 2026-02-11 11:17:54,807 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-11 05:18:13] 2026-02-11 11:17:54,807 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-11 05:18:13] 2026-02-11 11:17:54,807 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-11 05:18:13] 2026-02-11 11:17:54,807 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-11 05:18:13] 2026-02-11 11:17:54,807 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-11 05:18:13] 2026-02-11 11:17:54,807 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-11 05:18:13] 2026-02-11 11:17:54,807 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-11 05:18:13] 2026-02-11 11:17:54,807 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-11 05:18:13] 2026-02-11 11:17:54,807 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-11 05:18:13] 2026-02-11 11:17:54,807 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-11 05:18:13] 2026-02-11 11:17:54,807 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-11 05:18:13] 2026-02-11 11:17:54,807 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-11 05:18:13] 2026-02-11 11:17:54,807 | INFO     | job 7010053166 has completed (purged errors)
[2026-02-11 05:18:13] 2026-02-11 11:17:54,807 | INFO     | overall cleanup function is called
[2026-02-11 05:18:13] 2026-02-11 11:17:55,592 | INFO     | PID=3009965 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-11 05:18:13] 2026-02-11 11:17:55,592 | INFO     | .. there are 2 such processes running
[2026-02-11 05:18:13] 2026-02-11 11:17:55,814 | INFO     | --- collectZombieJob: --- 10, [3014532]
[2026-02-11 05:18:13] 2026-02-11 11:17:55,814 | INFO     | zombie collector waiting for pid 3014532
[2026-02-11 05:18:13] 2026-02-11 11:17:55,814 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-11 05:18:13] 2026-02-11 11:17:55,814 | INFO     | collected zombie processes
[2026-02-11 05:18:13] 2026-02-11 11:17:55,814 | INFO     | will attempt to kill all subprocesses of pid=3014532
[2026-02-11 05:18:13] 2026-02-11 11:17:55,855 | INFO     | process IDs to be killed: [3014532] (in reverse order)
[2026-02-11 05:18:13] 2026-02-11 11:17:55,878 | WARNING  | found no corresponding commands to process id(s)
[2026-02-11 05:18:13] 2026-02-11 11:17:55,879 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-11 05:18:13] 2026-02-11 11:17:55,880 | INFO     | did not find any defunct processes belonging to 3014532
[2026-02-11 05:18:13] 2026-02-11 11:17:55,882 | INFO     | did not find any defunct processes belonging to 3014532
[2026-02-11 05:18:13] 2026-02-11 11:17:55,882 | INFO     | ready for new job
[2026-02-11 05:18:13] 2026-02-11 11:17:55,882 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-11 05:18:13] 2026-02-11 11:17:55,883 | INFO     | **************************************
[2026-02-11 05:18:13] 2026-02-11 11:17:55,883 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-11 05:18:13] 2026-02-11 11:17:55,883 | INFO     | **************************************
[2026-02-11 05:18:13] 2026-02-11 11:17:55,883 | INFO     | 
[2026-02-11 05:18:13] 2026-02-11 11:17:55,884 | INFO     | architecture information:
[2026-02-11 05:18:13] 2026-02-11 11:17:55,884 | INFO     | executing command: cat /etc/os-release
[2026-02-11 05:18:13] 2026-02-11 11:17:55,888 | INFO     | cat /etc/os-release:
[2026-02-11 05:18:13] NAME="CentOS Linux"
[2026-02-11 05:18:13] VERSION="7 (Core)"
[2026-02-11 05:18:13] ID="centos"
[2026-02-11 05:18:13] ID_LIKE="rhel fedora"
[2026-02-11 05:18:13] VERSION_ID="7"
[2026-02-11 05:18:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-11 05:18:13] ANSI_COLOR="0;31"
[2026-02-11 05:18:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-11 05:18:13] HOME_URL="https://www.centos.org/"
[2026-02-11 05:18:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-11 05:18:13] 
[2026-02-11 05:18:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-11 05:18:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-11 05:18:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-11 05:18:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-11 05:18:13] 
[2026-02-11 05:18:13] 2026-02-11 11:17:55,888 | INFO     | **************************************
[2026-02-11 05:18:13] 2026-02-11 11:17:56,391 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-02-11 05:18:13] 2026-02-11 11:17:56,396 | INFO     | sufficient remaining disk space (3858677891072 B)
[2026-02-11 05:18:13] 2026-02-11 11:17:56,397 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-11 05:18:13] 2026-02-11 11:17:56,397 | INFO     | current server update state: UPDATING_FINAL
[2026-02-11 05:18:13] 2026-02-11 11:17:56,397 | INFO     | update_server=False
[2026-02-11 05:18:13] 2026-02-11 11:17:56,397 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-11 05:18:13] 2026-02-11 11:17:56,397 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-11 05:18:13] 2026-02-11 11:17:56,397 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-11 05:18:13] 2026-02-11 11:17:56,397 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-11 05:18:13] 2026-02-11 11:17:56,397 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-11 05:18:13] 2026-02-11 11:17:56,397 | INFO     | found 0 job(s) in 20 queues
[2026-02-11 05:18:13] 2026-02-11 11:17:56,398 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-11 05:18:13] 2026-02-11 11:17:56,398 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-11 05:18:13] 2026-02-11 11:17:56,617 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-11 05:18:13] 2026-02-11 11:17:56,617 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-11 05:18:13] 2026-02-11 11:17:56,618 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-11 05:18:13] 2026-02-11 11:17:56,618 | INFO     | will abort loop
[2026-02-11 05:18:13] 2026-02-11 11:17:56,978 | INFO     | all payload control threads have been joined
[2026-02-11 05:18:13] 2026-02-11 11:17:57,159 | INFO     | all data control threads have been joined
[2026-02-11 05:18:13] 2026-02-11 11:17:57,401 | INFO     | [job] retrieve thread has finished
[2026-02-11 05:18:13] 2026-02-11 11:17:57,403 | INFO     | [job] queue monitor thread has finished
[2026-02-11 05:18:13] 2026-02-11 11:17:57,622 | INFO     | [payload] failed_post thread has finished
[2026-02-11 05:18:13] 2026-02-11 11:17:57,623 | INFO     | [job] job monitor thread has finished
[2026-02-11 05:18:13] 2026-02-11 11:17:57,711 | INFO     | all job control threads have been joined
[2026-02-11 05:18:13] 2026-02-11 11:17:57,982 | INFO     | [payload] control thread has finished
[2026-02-11 05:18:13] 2026-02-11 11:17:58,164 | INFO     | [data] control thread has finished
[2026-02-11 05:18:13] 2026-02-11 11:17:58,402 | INFO     | [data] copytool_out thread has finished
[2026-02-11 05:18:13] 2026-02-11 11:17:58,422 | INFO     | [payload] execute_payloads thread has finished
[2026-02-11 05:18:13] 2026-02-11 11:17:58,599 | INFO     | [job] validate thread has finished
[2026-02-11 05:18:13] 2026-02-11 11:17:58,634 | INFO     | [job] create_data_payload thread has finished
[2026-02-11 05:18:13] 2026-02-11 11:17:58,686 | INFO     | [payload] validate_pre thread has finished
[2026-02-11 05:18:13] 2026-02-11 11:17:58,713 | INFO     | [job] control thread has finished
[2026-02-11 05:18:13] 2026-02-11 11:17:58,844 | INFO     | [payload] validate_post thread has finished
[2026-02-11 05:18:13] 2026-02-11 11:17:58,845 | INFO     | [data] copytool_in thread has finished
[2026-02-11 05:18:13] 2026-02-11 11:18:00,403 | INFO     | [data] queue_monitor thread has finished
[2026-02-11 05:18:13] 2026-02-11 11:18:04,824 | INFO     | [monitor] cgroup control has ended
[2026-02-11 05:18:13] 2026-02-11 11:18:06,484 | INFO     | job.realtimelogging is not enabled
[2026-02-11 05:18:13] 2026-02-11 11:18:07,490 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-11 05:18:13] 2026-02-11 11:18:07,890 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140571648759616)>', '<ExcThread(monitor, started 140571293234944)>']
[2026-02-11 05:18:13] 2026-02-11 11:18:08,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-11 05:18:13] 2026-02-11 11:18:08,457 | INFO     | [monitor] control thread has ended
[2026-02-11 05:18:13] 2026-02-11 11:18:12,915 | INFO     | all workflow threads have been joined
[2026-02-11 05:18:13] 2026-02-11 11:18:12,915 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-11 05:18:13] 2026-02-11 11:18:12,915 | INFO     | traces error code: 0
[2026-02-11 05:18:13] 2026-02-11 11:18:12,916 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-11 05:18:13] 2026-02-11 11:18:12,959 [wrapper] ==== pilot stdout END ====
[2026-02-11 05:18:13] 2026-02-11 11:18:12,960 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-11 05:18:13] 2026-02-11 11:18:12,961 [wrapper] pilotpid: 3009965
[2026-02-11 05:18:13] 2026-02-11 11:18:12,962 [wrapper] Pilot exit status: 0
[2026-02-11 05:18:13] 2026-02-11 11:18:12,965 [wrapper] pandaids: 7010053166
[2026-02-11 05:18:13] 2026-02-11 11:18:12,980 [wrapper] cleanup supervisor_pilot 3032461 3009966
[2026-02-11 05:18:13] 2026-02-11 11:18:12,981 [wrapper] Test setup, not cleaning
[2026-02-11 05:18:13] 2026-02-11 11:18:12,982 [wrapper] apfmon messages muted
[2026-02-11 05:18:13] 2026-02-11 11:18:12,983 [wrapper] ==== wrapper stdout END ====
[2026-02-11 05:18:13] 2026-02-11 11:18:12,984 [wrapper] ==== wrapper stderr END ====
[2026-02-11 05:18:13]  *** Error codes and diagnostics ***
[2026-02-11 05:18:13]     "exeErrorCode": 0,
[2026-02-11 05:18:13]     "exeErrorDiag": "",
[2026-02-11 05:18:13]     "pilotErrorCode": 0,
[2026-02-11 05:18:13]     "pilotErrorDiag": "",
[2026-02-11 05:18:13]  *** Listing of results directory ***
[2026-02-11 05:18:13] total 942352
[2026-02-11 05:18:13] -rw-r--r--. 1 boinc boinc    584627 Feb 10 01:15 pilot3.tar.gz
[2026-02-11 05:18:13] -rwx------. 1 boinc boinc     36322 Feb 10 01:19 runpilot2-wrapper.sh
[2026-02-11 05:18:13] -rw-r--r--. 1 boinc boinc      5111 Feb 10 01:21 queuedata.json
[2026-02-11 05:18:13] -rw-r--r--. 1 boinc boinc       100 Feb 11 04:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-11 05:18:13] -rwxr-xr-x. 1 boinc boinc      7986 Feb 11 04:40 run_atlas
[2026-02-11 05:18:13] -rw-r--r--. 1 boinc boinc       105 Feb 11 04:40 job.xml
[2026-02-11 05:18:13] -rw-r--r--. 2 boinc boinc    597964 Feb 11 04:40 input.tar.gz
[2026-02-11 05:18:13] -rw-r--r--. 2 boinc boinc 683362611 Feb 11 04:40 EVNT.48431094._000507.pool.root.1
[2026-02-11 05:18:13] -rw-r--r--. 2 boinc boinc     15845 Feb 11 04:40 start_atlas.sh
[2026-02-11 05:18:13] drwxrwx--x. 1 boinc boinc        76 Feb 11 04:40 shared
[2026-02-11 05:18:13] -rw-r--r--. 1 boinc boinc     10049 Feb 11 04:40 init_data.xml
[2026-02-11 05:18:13] -rw-r--r--. 1 boinc boinc         0 Feb 11 04:40 boinc_setup_complete
[2026-02-11 05:18:13] -rw-r--r--. 1 boinc boinc         0 Feb 11 04:40 boinc_lockfile
[2026-02-11 05:18:13] -rw-r--r--. 1 boinc boinc      2556 Feb 11 04:40 pandaJob.out
[2026-02-11 05:18:13] -rw-------. 1 boinc boinc        63 Feb 11 04:40 setup.sh.local
[2026-02-11 05:18:13] -rw-------. 1 boinc boinc   1009625 Feb 11 04:40 agis_schedconf.cvmfs.json
[2026-02-11 05:18:13] -rw-------. 1 boinc boinc   1512955 Feb 11 04:40 agis_ddmendpoints.agis.ALL.json
[2026-02-11 05:18:13] -rw-------. 1 boinc boinc       431 Feb 11 04:41 workernode_map.json
[2026-02-11 05:18:13] drwx------. 1 boinc boinc       414 Feb 11 04:41 pilot3
[2026-02-11 05:18:13] -rw-------. 1 boinc boinc        95 Feb 11 05:17 pilot_heartbeat.json
[2026-02-11 05:18:13] -rw-------. 1 boinc boinc 276169710 Feb 11 05:17 HITS.48431096._023182.pool.root.1
[2026-02-11 05:18:13] -rw-r--r--. 1 boinc boinc       530 Feb 11 05:17 boinc_task_state.xml
[2026-02-11 05:18:13] -rw-------. 1 boinc boinc      1034 Feb 11 05:17 memory_monitor_summary.json
[2026-02-11 05:18:13] -rw-------. 1 boinc boinc    390097 Feb 11 05:17 log.48431096._023182.job.log.tgz.1
[2026-02-11 05:18:13] -rw-------. 1 boinc boinc      6353 Feb 11 05:17 heartbeat.json
[2026-02-11 05:18:13] -rw-r--r--. 1 boinc boinc      8192 Feb 11 05:18 boinc_mmap_file
[2026-02-11 05:18:13] -rw-r--r--. 1 boinc boinc        27 Feb 11 05:18 wrapper_checkpoint.txt
[2026-02-11 05:18:13] -rw-------. 1 boinc boinc      4808 Feb 11 05:18 pilotlog.txt
[2026-02-11 05:18:13] -rw-------. 1 boinc boinc    361187 Feb 11 05:18 log.48431096._023182.job.log.1
[2026-02-11 05:18:13] -rw-------. 1 boinc boinc       357 Feb 11 05:18 output.list
[2026-02-11 05:18:13] -rw-r--r--. 1 boinc boinc       620 Feb 11 05:18 runtime_log
[2026-02-11 05:18:13] -rw-------. 1 boinc boinc    768000 Feb 11 05:18 result.tar.gz
[2026-02-11 05:18:13] -rw-r--r--. 1 boinc boinc      9395 Feb 11 05:18 runtime_log.err
[2026-02-11 05:18:13] -rw-------. 1 boinc boinc       652 Feb 11 05:18 hdBMDmiCx98n9Rq4apOajLDm4fhM0noT9bVooX4SDmT3gKDmbRlaBo.diag
[2026-02-11 05:18:13] -rw-r--r--. 1 boinc boinc     22267 Feb 11 05:18 stderr.txt
[2026-02-11 05:18:13] HITS file was successfully produced:
[2026-02-11 05:18:13] -rw-------. 1 boinc boinc 276169710 Feb 11 05:17 shared/HITS.pool.root.1
[2026-02-11 05:18:13]  *** Contents of shared directory: ***
[2026-02-11 05:18:13] total 938400
[2026-02-11 05:18:13] -rw-r--r--. 2 boinc boinc    597964 Feb 11 04:40 input.tar.gz
[2026-02-11 05:18:13] -rw-r--r--. 2 boinc boinc 683362611 Feb 11 04:40 ATLAS.root_0
[2026-02-11 05:18:13] -rw-r--r--. 2 boinc boinc     15845 Feb 11 04:40 start_atlas.sh
[2026-02-11 05:18:13] -rw-------. 1 boinc boinc 276169710 Feb 11 05:17 HITS.pool.root.1
[2026-02-11 05:18:13] -rw-------. 1 boinc boinc    768000 Feb 11 05:18 result.tar.gz
05:18:14 (3006113): run_atlas exited; CPU time 24444.965454
05:18:14 (3006113): called boinc_finish(0)

</stderr_txt>
]]>

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