Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
16:09:06 (2042001): wrapper (7.7.26015): starting
16:09:06 (2042001): wrapper: running run_atlas (--nthreads 12)
[2026-02-11 16:09:06] Arguments: --nthreads 12
[2026-02-11 16:09:06] Threads: 12
[2026-02-11 16:09:06] Checking for CVMFS
[2026-02-11 16:09:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 16:09:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 16:09:08] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 16:09:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 16:09:39] 2.12.7.0 5265 2937 73072 156128 2 188 3756697 4194305 1834 130560 0 4120470 99.995 89645 105 http://s1unl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-02-11 16:09:39] CVMFS is ok
[2026-02-11 16:09:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 16:09:39] Checking for apptainer binary...
[2026-02-11 16:09:39] apptainer is not installed, using version from CVMFS
[2026-02-11 16:09:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 16:09:39] Trebeth
[2026-02-11 16:09:39] apptainer works
[2026-02-11 16:09:39] Set ATHENA_PROC_NUMBER=12
[2026-02-11 16:09:39] Set ATHENA_CORE_NUMBER=12
[2026-02-11 16:09:39] Starting ATLAS job with PandaID=7000018630
[2026-02-11 16:09:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-11 17:21:31]  *** The last 200 lines of the pilot log: ***
[2026-02-11 17:21:31]  lfn=log.48317892._012997.job.log.tgz.1
[2026-02-11 17:21:31]  mtime=0
[2026-02-11 17:21:31]  protocol_id=None
[2026-02-11 17:21:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-11 17:21:31]  replicas=None
[2026-02-11 17:21:31]  scope=mc23_13p6TeV
[2026-02-11 17:21:31]  status=None
[2026-02-11 17:21:31]  status_code=0
[2026-02-11 17:21:31]  storage_token=
[2026-02-11 17:21:31]  surl=/var/lib/boinc-client/slots/6/PanDA_Pilot-7000018630/log.48317892._012997.job.log.tgz.1
[2026-02-11 17:21:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/5d/log.48317892._012997.job.log.tgz.1
[2026-02-11 17:21:31]  workdir=None
[2026-02-11 17:21:31] ]
[2026-02-11 17:21:31] 2026-02-11 22:20:55,428 | INFO     | transferring file log.48317892._012997.job.log.tgz.1 from /var/lib/boinc-client/slots/6/PanDA_Pilot-7000018630/log.48317892._012997.job.log.tgz.1 to /var/lib/boinc
[2026-02-11 17:21:31] 2026-02-11 22:20:55,429 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/6/PanDA_Pilot-7000018630/log.48317892._012997.job.log.tgz.1 /var/lib/boinc-client/slots/6/log.483178
[2026-02-11 17:21:31] 2026-02-11 22:20:55,446 | INFO     | adding to output.list: log.48317892._012997.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/5d/log.48317892._012997.job.log.tg
[2026-02-11 17:21:31] 2026-02-11 22:20:55,447 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-11 17:21:31] 2026-02-11 22:20:55,447 | INFO     | summary of transferred files:
[2026-02-11 17:21:31] 2026-02-11 22:20:55,447 | INFO     |  -- lfn=log.48317892._012997.job.log.tgz.1, status_code=0, status=transferred
[2026-02-11 17:21:31] 2026-02-11 22:20:55,447 | INFO     | stage-out finished correctly
[2026-02-11 17:21:31] 2026-02-11 22:20:55,872 | INFO     | time since job start (4255s) is within the limit (349056.0s)
[2026-02-11 17:21:31] 2026-02-11 22:20:56,907 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-11 17:21:31] 2026-02-11 22:20:57,877 | INFO     | time since job start (4257s) is within the limit (349056.0s)
[2026-02-11 17:21:31] 2026-02-11 22:20:59,027 | WARNING  | process 2051345 can no longer be monitored (due to stat problems) - aborting
[2026-02-11 17:21:31] 2026-02-11 22:20:59,027 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-7000018630/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 17:21:31] 2026-02-11 22:20:59,202 | INFO     | number of running child processes to parent process 2051345: 1
[2026-02-11 17:21:31] 2026-02-11 22:20:59,202 | INFO     | maximum number of monitored processes: 6
[2026-02-11 17:21:31] 2026-02-11 22:20:59,550 | INFO     | job 7000018630 has state=finished
[2026-02-11 17:21:31] 2026-02-11 22:20:59,551 | INFO     | preparing for final server update for job 7000018630 in state='finished'
[2026-02-11 17:21:31] 2026-02-11 22:20:59,551 | INFO     | reading metadata from: /var/lib/boinc-client/slots/6/PanDA_Pilot-7000018630/jobReport.json
[2026-02-11 17:21:31] 2026-02-11 22:20:59,554 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/6/workernode_map.json
[2026-02-11 17:21:31] 2026-02-11 22:20:59,554 | INFO     | this job has now completed (state=finished)
[2026-02-11 17:21:31] 2026-02-11 22:20:59,554 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-11 17:21:31] 2026-02-11 22:20:59,554 | INFO     | log transfer has been attempted: DONE
[2026-02-11 17:21:31] 2026-02-11 22:20:59,555 | INFO     | job 7000018630 has finished - writing final server update
[2026-02-11 17:21:31] 2026-02-11 22:20:59,555 | INFO     | total number of processed events: 400 (read)
[2026-02-11 17:21:31] 2026-02-11 22:20:59,584 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-7000018630/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 17:21:31] 2026-02-11 22:20:59,585 | INFO     | extracted standard info from prmon json
[2026-02-11 17:21:31] 2026-02-11 22:20:59,585 | INFO     | extracted standard memory fields from prmon json
[2026-02-11 17:21:31] 2026-02-11 22:20:59,585 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-11 17:21:31] 2026-02-11 22:20:59,586 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-11 17:21:31] 2026-02-11 22:20:59,586 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-11 17:21:31] 2026-02-11 22:20:59,588 | INFO     | fitting pss+swap vs Time
[2026-02-11 17:21:31] 2026-02-11 22:20:59,588 | INFO     | sum of square deviations: 77515872.0
[2026-02-11 17:21:31] 2026-02-11 22:20:59,588 | INFO     | sum of deviations: 3713300275.0
[2026-02-11 17:21:31] 2026-02-11 22:20:59,588 | INFO     | mean x: 1770846415.0
[2026-02-11 17:21:31] 2026-02-11 22:20:59,589 | INFO     | mean y: 2679550.746031746
[2026-02-11 17:21:31] 2026-02-11 22:20:59,589 | INFO     | intersect: -84827488905.62202
[2026-02-11 17:21:31] 2026-02-11 22:20:59,589 | INFO     | chi2: 0.15536377485380304
[2026-02-11 17:21:31] 2026-02-11 22:20:59,589 | INFO     | current memory leak: 47.90 B/s (using 63 data points, chi2=0.16)
[2026-02-11 17:21:31] 2026-02-11 22:20:59,589 | INFO     | could have reported an average CPU frequency of 2963 MHz (6 samples)
[2026-02-11 17:21:31] 2026-02-11 22:20:59,590 | INFO     | ..............................
[2026-02-11 17:21:31] 2026-02-11 22:20:59,590 | INFO     | . Timing measurements:
[2026-02-11 17:21:31] 2026-02-11 22:20:59,590 | INFO     | . get job = 0 s
[2026-02-11 17:21:31] 2026-02-11 22:20:59,590 | INFO     | . initial setup = 5 s
[2026-02-11 17:21:31] 2026-02-11 22:20:59,590 | INFO     | . payload setup = 4 s
[2026-02-11 17:21:31] 2026-02-11 22:20:59,590 | INFO     | . stage-in = 0 s
[2026-02-11 17:21:31] 2026-02-11 22:20:59,590 | INFO     | . payload execution = 4234 s
[2026-02-11 17:21:31] 2026-02-11 22:20:59,590 | INFO     | . stage-out = 0 s
[2026-02-11 17:21:31] 2026-02-11 22:20:59,590 | INFO     | . log creation = 0 s
[2026-02-11 17:21:31] 2026-02-11 22:20:59,591 | INFO     | ..............................
[2026-02-11 17:21:31] 2026-02-11 22:20:59,676 | INFO     | 
[2026-02-11 17:21:31] 2026-02-11 22:20:59,676 | INFO     | job summary report
[2026-02-11 17:21:31] 2026-02-11 22:20:59,676 | INFO     | --------------------------------------------------
[2026-02-11 17:21:31] 2026-02-11 22:20:59,676 | INFO     | PanDA job id: 7000018630
[2026-02-11 17:21:31] 2026-02-11 22:20:59,676 | INFO     | task id: 48317892
[2026-02-11 17:21:31] 2026-02-11 22:20:59,677 | INFO     | errors: (none)
[2026-02-11 17:21:31] 2026-02-11 22:20:59,677 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-11 17:21:31] 2026-02-11 22:20:59,677 | INFO     | pilot state: finished 
[2026-02-11 17:21:31] 2026-02-11 22:20:59,677 | INFO     | transexitcode: 0
[2026-02-11 17:21:31] 2026-02-11 22:20:59,677 | INFO     | exeerrorcode: 0
[2026-02-11 17:21:31] 2026-02-11 22:20:59,677 | INFO     | exeerrordiag: 
[2026-02-11 17:21:31] 2026-02-11 22:20:59,677 | INFO     | exitcode: 0
[2026-02-11 17:21:31] 2026-02-11 22:20:59,677 | INFO     | exitmsg: OK
[2026-02-11 17:21:31] 2026-02-11 22:20:59,677 | INFO     | cpuconsumptiontime: 44246 s
[2026-02-11 17:21:31] 2026-02-11 22:20:59,677 | INFO     | nevents: 400
[2026-02-11 17:21:31] 2026-02-11 22:20:59,677 | INFO     | neventsw: 0
[2026-02-11 17:21:31] 2026-02-11 22:20:59,678 | INFO     | pid: 2051345
[2026-02-11 17:21:31] 2026-02-11 22:20:59,678 | INFO     | pgrp: 2051345
[2026-02-11 17:21:31] 2026-02-11 22:20:59,678 | INFO     | corecount: 12
[2026-02-11 17:21:31] 2026-02-11 22:20:59,678 | INFO     | event service: False
[2026-02-11 17:21:31] 2026-02-11 22:20:59,678 | INFO     | sizes: {0: 2282177, 11: 2282177, 4242: 2308169, 4244: 2317181, 4245: 2317237, 4248: 2317431}
[2026-02-11 17:21:31] 2026-02-11 22:20:59,678 | INFO     | --------------------------------------------------
[2026-02-11 17:21:31] 2026-02-11 22:20:59,678 | INFO     | 
[2026-02-11 17:21:31] 2026-02-11 22:20:59,678 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2026-02-11 17:21:31] 2026-02-11 22:20:59,700 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-11 17:21:31] 2026-02-11 22:20:59,701 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-11 17:21:31] 2026-02-11 22:20:59,701 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-11 17:21:31] 2026-02-11 22:20:59,701 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-11 17:21:31] 2026-02-11 22:20:59,701 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-11 17:21:31] 2026-02-11 22:20:59,701 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-11 17:21:31] 2026-02-11 22:20:59,701 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-11 17:21:31] 2026-02-11 22:20:59,701 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-11 17:21:31] 2026-02-11 22:20:59,701 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-11 17:21:31] 2026-02-11 22:20:59,701 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-11 17:21:31] 2026-02-11 22:20:59,701 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-11 17:21:31] 2026-02-11 22:20:59,701 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-11 17:21:31] 2026-02-11 22:20:59,701 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-11 17:21:31] 2026-02-11 22:20:59,701 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-11 17:21:31] 2026-02-11 22:20:59,701 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-11 17:21:31] 2026-02-11 22:20:59,701 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-11 17:21:31] 2026-02-11 22:20:59,702 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-11 17:21:31] 2026-02-11 22:20:59,702 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-11 17:21:31] 2026-02-11 22:20:59,702 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-11 17:21:31] 2026-02-11 22:20:59,702 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-11 17:21:31] 2026-02-11 22:20:59,702 | INFO     | job 7000018630 has completed (purged errors)
[2026-02-11 17:21:31] 2026-02-11 22:20:59,702 | INFO     | overall cleanup function is called
[2026-02-11 17:21:31] 2026-02-11 22:21:00,710 | INFO     | --- collectZombieJob: --- 10, [2051345]
[2026-02-11 17:21:31] 2026-02-11 22:21:00,710 | INFO     | zombie collector waiting for pid 2051345
[2026-02-11 17:21:31] 2026-02-11 22:21:00,711 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-11 17:21:31] 2026-02-11 22:21:00,711 | INFO     | collected zombie processes
[2026-02-11 17:21:31] 2026-02-11 22:21:00,711 | INFO     | will attempt to kill all subprocesses of pid=2051345
[2026-02-11 17:21:31] 2026-02-11 22:21:00,888 | INFO     | process IDs to be killed: [2051345] (in reverse order)
[2026-02-11 17:21:31] 2026-02-11 22:21:00,948 | WARNING  | found no corresponding commands to process id(s)
[2026-02-11 17:21:31] 2026-02-11 22:21:00,948 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-11 17:21:31] 2026-02-11 22:21:00,952 | INFO     | did not find any defunct processes belonging to 2051345
[2026-02-11 17:21:31] 2026-02-11 22:21:00,957 | INFO     | did not find any defunct processes belonging to 2051345
[2026-02-11 17:21:31] 2026-02-11 22:21:00,957 | INFO     | ready for new job
[2026-02-11 17:21:31] 2026-02-11 22:21:00,957 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-11 17:21:31] 2026-02-11 22:21:00,959 | INFO     | **************************************
[2026-02-11 17:21:31] 2026-02-11 22:21:00,959 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-11 17:21:31] 2026-02-11 22:21:00,959 | INFO     | **************************************
[2026-02-11 17:21:31] 2026-02-11 22:21:00,959 | INFO     | 
[2026-02-11 17:21:31] 2026-02-11 22:21:00,981 | INFO     | architecture information:
[2026-02-11 17:21:31] 2026-02-11 22:21:00,981 | INFO     | executing command: cat /etc/os-release
[2026-02-11 17:21:31] 2026-02-11 22:21:00,992 | INFO     | cat /etc/os-release:
[2026-02-11 17:21:31] NAME="CentOS Linux"
[2026-02-11 17:21:31] VERSION="7 (Core)"
[2026-02-11 17:21:31] ID="centos"
[2026-02-11 17:21:31] ID_LIKE="rhel fedora"
[2026-02-11 17:21:31] VERSION_ID="7"
[2026-02-11 17:21:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-11 17:21:31] ANSI_COLOR="0;31"
[2026-02-11 17:21:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-11 17:21:31] HOME_URL="https://www.centos.org/"
[2026-02-11 17:21:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-11 17:21:31] 
[2026-02-11 17:21:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-11 17:21:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-11 17:21:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-11 17:21:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-11 17:21:31] 
[2026-02-11 17:21:31] 2026-02-11 22:21:00,992 | INFO     | **************************************
[2026-02-11 17:21:31] 2026-02-11 22:21:01,494 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2026-02-11 17:21:31] 2026-02-11 22:21:01,507 | INFO     | sufficient remaining disk space (379124187136 B)
[2026-02-11 17:21:31] 2026-02-11 22:21:01,508 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-11 17:21:31] 2026-02-11 22:21:01,508 | INFO     | current server update state: UPDATING_FINAL
[2026-02-11 17:21:31] 2026-02-11 22:21:01,508 | INFO     | update_server=False
[2026-02-11 17:21:31] 2026-02-11 22:21:01,508 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-11 17:21:31] 2026-02-11 22:21:01,508 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-11 17:21:31] 2026-02-11 22:21:01,508 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-11 17:21:31] 2026-02-11 22:21:01,706 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-11 17:21:31] 2026-02-11 22:21:01,706 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-11 17:21:31] 2026-02-11 22:21:01,706 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-11 17:21:31] 2026-02-11 22:21:01,706 | INFO     | will abort loop
[2026-02-11 17:21:31] 2026-02-11 22:21:01,946 | INFO     | all data control threads have been joined
[2026-02-11 17:21:31] 2026-02-11 22:21:02,390 | INFO     | all payload control threads have been joined
[2026-02-11 17:21:31] 2026-02-11 22:21:02,510 | INFO     | [job] queue monitor thread has finished
[2026-02-11 17:21:31] 2026-02-11 22:21:02,511 | INFO     | [job] retrieve thread has finished
[2026-02-11 17:21:31] 2026-02-11 22:21:02,566 | INFO     | [payload] validate_post thread has finished
[2026-02-11 17:21:31] 2026-02-11 22:21:02,712 | INFO     | [job] job monitor thread has finished
[2026-02-11 17:21:31] 2026-02-11 22:21:02,794 | INFO     | [payload] failed_post thread has finished
[2026-02-11 17:21:31] 2026-02-11 22:21:02,950 | INFO     | [data] control thread has finished
[2026-02-11 17:21:31] 2026-02-11 22:21:02,989 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-11 17:21:31] 2026-02-11 22:21:03,106 | INFO     | all job control threads have been joined
[2026-02-11 17:21:31] 2026-02-11 22:21:03,118 | INFO     | [job] validate thread has finished
[2026-02-11 17:21:31] 2026-02-11 22:21:03,174 | INFO     | [job] create_data_payload thread has finished
[2026-02-11 17:21:31] 2026-02-11 22:21:03,286 | INFO     | [payload] validate_pre thread has finished
[2026-02-11 17:21:31] 2026-02-11 22:21:03,394 | INFO     | [payload] control thread has finished
[2026-02-11 17:21:31] 2026-02-11 22:21:03,454 | INFO     | [payload] execute_payloads thread has finished
[2026-02-11 17:21:31] 2026-02-11 22:21:03,510 | INFO     | [data] copytool_out thread has finished
[2026-02-11 17:21:31] 2026-02-11 22:21:03,574 | INFO     | [data] copytool_in thread has finished
[2026-02-11 17:21:31] 2026-02-11 22:21:04,110 | INFO     | [job] control thread has finished
[2026-02-11 17:21:31] 2026-02-11 22:21:06,778 | INFO     | [monitor] cgroup control has ended
[2026-02-11 17:21:31] 2026-02-11 22:21:06,995 | INFO     | [data] queue_monitor thread has finished
[2026-02-11 17:21:31] 2026-02-11 22:21:11,840 | INFO     | job.realtimelogging is not enabled
[2026-02-11 17:21:31] 2026-02-11 22:21:12,842 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-11 17:21:31] 2026-02-11 22:21:13,780 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139959798314816)>', '<ExcThread(monitor, started 139959571494656)>']
[2026-02-11 17:21:31] 2026-02-11 22:21:18,802 | INFO     | all workflow threads have been joined
[2026-02-11 17:21:31] 2026-02-11 22:21:18,803 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-11 17:21:31] 2026-02-11 22:21:18,803 | INFO     | traces error code: 0
[2026-02-11 17:21:31] 2026-02-11 22:21:18,803 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-11 17:21:31] 2026-02-11 22:21:29,912 | INFO     | 4265s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-02-11 17:21:31] 2026-02-11 22:21:31,143 | INFO     | PID=2046529 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-11 17:21:31] 2026-02-11 22:21:31,143 | INFO     | .. there are 3 such processes running
[2026-02-11 17:21:31] 2026-02-11 22:21:31,143 | INFO     | found 0 job(s) in 20 queues
[2026-02-11 17:21:31] 2026-02-11 22:21:31,144 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-11 17:21:31] 2026-02-11 22:21:31,144 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-11 17:21:31] 2026-02-11 22:21:31,144 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-11 17:21:31] 2026-02-11 22:21:31,144 | INFO     | [monitor] control thread has ended
[2026-02-11 17:21:31] 2026-02-11 22:21:31,242 [wrapper] ==== pilot stdout END ====
[2026-02-11 17:21:31] 2026-02-11 22:21:31,244 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-11 17:21:31] 2026-02-11 22:21:31,246 [wrapper] pilotpid: 2046529
[2026-02-11 17:21:31] 2026-02-11 22:21:31,248 [wrapper] Pilot exit status: 0
[2026-02-11 17:21:31] 2026-02-11 22:21:31,255 [wrapper] pandaids: 7000018630
[2026-02-11 17:21:31] 2026-02-11 22:21:31,286 [wrapper] cleanup supervisor_pilot 2095154 2046530
[2026-02-11 17:21:31] 2026-02-11 22:21:31,288 [wrapper] Test setup, not cleaning
[2026-02-11 17:21:31] 2026-02-11 22:21:31,290 [wrapper] apfmon messages muted
[2026-02-11 17:21:31] 2026-02-11 22:21:31,292 [wrapper] ==== wrapper stdout END ====
[2026-02-11 17:21:31] 2026-02-11 22:21:31,294 [wrapper] ==== wrapper stderr END ====
[2026-02-11 17:21:31]  *** Error codes and diagnostics ***
[2026-02-11 17:21:31]     "exeErrorCode": 0,
[2026-02-11 17:21:31]     "exeErrorDiag": "",
[2026-02-11 17:21:31]     "pilotErrorCode": 0,
[2026-02-11 17:21:31]     "pilotErrorDiag": "",
[2026-02-11 17:21:31]  *** Listing of results directory ***
[2026-02-11 17:21:31] total 673640
[2026-02-11 17:21:31] -rwx------ 1 boinc boinc     36322 Feb  3 15:02 runpilot2-wrapper.sh
[2026-02-11 17:21:31] -rw-r--r-- 1 boinc boinc      5111 Feb  3 15:04 queuedata.json
[2026-02-11 17:21:31] -rw-r--r-- 1 boinc boinc    584422 Feb  3 15:04 pilot3.tar.gz
[2026-02-11 17:21:31] -rw-r--r-- 1 boinc boinc       100 Feb 11 16:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-11 17:21:31] -rwxr-xr-x 1 boinc boinc      7986 Feb 11 16:09 run_atlas
[2026-02-11 17:21:31] -rw-r--r-- 1 boinc boinc       105 Feb 11 16:09 job.xml
[2026-02-11 17:21:31] -rw-r--r-- 2 boinc boinc     15845 Feb 11 16:09 start_atlas.sh
[2026-02-11 17:21:31] drwxrwx--x 2 boinc boinc      4096 Feb 11 16:09 shared
[2026-02-11 17:21:31] -rw-r--r-- 2 boinc boinc    597750 Feb 11 16:09 input.tar.gz
[2026-02-11 17:21:31] -rw-r--r-- 1 boinc boinc      7579 Feb 11 16:09 init_data.xml
[2026-02-11 17:21:31] -rw-r--r-- 2 boinc boinc 497001346 Feb 11 16:09 EVNT.48317889._000248.pool.root.1
[2026-02-11 17:21:31] -rw-r--r-- 1 boinc boinc         0 Feb 11 16:09 boinc_lockfile
[2026-02-11 17:21:31] -rw-r--r-- 1 boinc boinc      2523 Feb 11 16:09 pandaJob.out
[2026-02-11 17:21:31] -rw------- 1 boinc boinc        50 Feb 11 16:09 setup.sh.local
[2026-02-11 17:21:31] -rw------- 1 boinc boinc   1005065 Feb 11 16:09 agis_schedconf.cvmfs.json
[2026-02-11 17:21:31] -rw------- 1 boinc boinc   1512955 Feb 11 16:09 agis_ddmendpoints.agis.ALL.json
[2026-02-11 17:21:31] -rw------- 1 boinc boinc       429 Feb 11 16:09 workernode_map.json
[2026-02-11 17:21:31] drwx------ 5 boinc boinc      4096 Feb 11 16:10 pilot3
[2026-02-11 17:21:31] -rw-r--r-- 1 boinc boinc       531 Feb 11 17:20 boinc_task_state.xml
[2026-02-11 17:21:31] -rw------- 1 boinc boinc 186786608 Feb 11 17:20 HITS.48317892._012997.pool.root.1
[2026-02-11 17:21:31] -rw------- 1 boinc boinc      1030 Feb 11 17:20 memory_monitor_summary.json
[2026-02-11 17:21:31] -rw------- 1 boinc boinc        95 Feb 11 17:20 pilot_heartbeat.json
[2026-02-11 17:21:31] -rw------- 1 boinc boinc    399235 Feb 11 17:20 log.48317892._012997.job.log.tgz.1
[2026-02-11 17:21:31] -rw------- 1 boinc boinc      6336 Feb 11 17:20 heartbeat.json
[2026-02-11 17:21:31] -rw-r--r-- 1 boinc boinc      8192 Feb 11 17:21 boinc_mmap_file
[2026-02-11 17:21:31] -rw-r--r-- 1 boinc boinc        27 Feb 11 17:21 wrapper_checkpoint.txt
[2026-02-11 17:21:31] -rw------- 1 boinc boinc       937 Feb 11 17:21 pilotlog.txt
[2026-02-11 17:21:31] -rw------- 1 boinc boinc    640530 Feb 11 17:21 log.48317892._012997.job.log.1
[2026-02-11 17:21:31] -rw------- 1 boinc boinc       357 Feb 11 17:21 output.list
[2026-02-11 17:21:31] -rw-r--r-- 1 boinc boinc       620 Feb 11 17:21 runtime_log
[2026-02-11 17:21:31] -rw------- 1 boinc boinc   1054720 Feb 11 17:21 result.tar.gz
[2026-02-11 17:21:31] -rw-r--r-- 1 boinc boinc      9403 Feb 11 17:21 runtime_log.err
[2026-02-11 17:21:31] -rw------- 1 boinc boinc       650 Feb 11 17:21 h61MDmImb78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmymVKDm3OnrVo.diag
[2026-02-11 17:21:31] -rw-r--r-- 1 boinc boinc     21392 Feb 11 17:21 stderr.txt
[2026-02-11 17:21:31] HITS file was successfully produced:
[2026-02-11 17:21:31] -rw------- 1 boinc boinc 186786608 Feb 11 17:20 shared/HITS.pool.root.1
[2026-02-11 17:21:31]  *** Contents of shared directory: ***
[2026-02-11 17:21:31] total 669408
[2026-02-11 17:21:31] -rw-r--r-- 2 boinc boinc     15845 Feb 11 16:09 start_atlas.sh
[2026-02-11 17:21:31] -rw-r--r-- 2 boinc boinc    597750 Feb 11 16:09 input.tar.gz
[2026-02-11 17:21:31] -rw-r--r-- 2 boinc boinc 497001346 Feb 11 16:09 ATLAS.root_0
[2026-02-11 17:21:31] -rw------- 1 boinc boinc 186786608 Feb 11 17:20 HITS.pool.root.1
[2026-02-11 17:21:31] -rw------- 1 boinc boinc   1054720 Feb 11 17:21 result.tar.gz
17:21:32 (2042001): run_atlas exited; CPU time 44323.526028
17:21:32 (2042001): called boinc_finish(0)

</stderr_txt>
]]>

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