Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:28:07 (14212): wrapper (7.7.26015): starting
13:28:07 (14212): wrapper: running run_atlas (--nthreads 4)
[2026-02-11 13:28:07] Arguments: --nthreads 4
[2026-02-11 13:28:07] Threads: 4
[2026-02-11 13:28:07] Checking for CVMFS
[2026-02-11 13:28:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 13:28:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 13:28:07] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 13:28:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 13:28:07] 2.9.2.0 3050 3 44992 156114 0 184 30877869 36864000 0 130560 0 26760 99.996 0 0 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-11 13:28:07] CVMFS is ok
[2026-02-11 13:28:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-11 13:28:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-11 13:28:07] Further information can be found at the LHC@home message board.
[2026-02-11 13:28:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 13:28:07] Checking for apptainer binary...
[2026-02-11 13:28:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-11 13:28:07] Running /usr/bin/apptainer --version
[2026-02-11 13:28:07] apptainer version 1.4.1-1.1
[2026-02-11 13:28:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 13:28:07] thA373a
[2026-02-11 13:28:07] apptainer works
[2026-02-11 13:28:07] Set ATHENA_PROC_NUMBER=4
[2026-02-11 13:28:07] Set ATHENA_CORE_NUMBER=4
[2026-02-11 13:28:07] Starting ATLAS job with PandaID=7008401914
[2026-02-11 13:28:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-11 14:38:30]  *** The last 200 lines of the pilot log: ***
[2026-02-11 14:38:30] 2026-02-11 13:37:48,600 | INFO     | current server update state: UPDATING_FINAL
[2026-02-11 14:38:30] 2026-02-11 13:37:48,600 | INFO     | update_server=False
[2026-02-11 14:38:30] 2026-02-11 13:37:48,600 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-11 14:38:30] 2026-02-11 13:37:48,600 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-11 14:38:30] 2026-02-11 13:37:48,600 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-11 14:38:30] 2026-02-11 13:37:48,600 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-11 14:38:30] 2026-02-11 13:37:48,600 | INFO     | aborting loop
[2026-02-11 14:38:30] 2026-02-11 13:37:48,600 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-11 14:38:30] 2026-02-11 13:37:48,887 | INFO     | all data control threads have been joined
[2026-02-11 14:38:30] 2026-02-11 13:37:49,278 | INFO     | all payload control threads have been joined
[2026-02-11 14:38:30] 2026-02-11 13:37:49,604 | INFO     | [job] job monitor thread has finished
[2026-02-11 14:38:30] 2026-02-11 13:37:49,605 | INFO     | [job] queue monitor thread has finished
[2026-02-11 14:38:30] 2026-02-11 13:37:49,606 | INFO     | [job] retrieve thread has finished
[2026-02-11 14:38:30] 2026-02-11 13:37:49,782 | INFO     | all job control threads have been joined
[2026-02-11 14:38:30] 2026-02-11 13:37:49,893 | INFO     | [data] control thread has finished
[2026-02-11 14:38:30] 2026-02-11 13:37:50,088 | INFO     | [job] validate thread has finished
[2026-02-11 14:38:30] 2026-02-11 13:37:50,180 | INFO     | [payload] execute_payloads thread has finished
[2026-02-11 14:38:30] 2026-02-11 13:37:50,194 | INFO     | [job] create_data_payload thread has finished
[2026-02-11 14:38:30] 2026-02-11 13:37:50,262 | INFO     | [payload] validate_pre thread has finished
[2026-02-11 14:38:30] 2026-02-11 13:37:50,284 | INFO     | [payload] control thread has finished
[2026-02-11 14:38:30] 2026-02-11 13:37:50,404 | INFO     | [data] copytool_in thread has finished
[2026-02-11 14:38:30] 2026-02-11 13:37:50,515 | INFO     | [payload] validate_post thread has finished
[2026-02-11 14:38:30] 2026-02-11 13:37:50,606 | INFO     | [data] copytool_out thread has finished
[2026-02-11 14:38:30] 2026-02-11 13:37:50,788 | INFO     | [job] control thread has finished
[2026-02-11 14:38:30] 2026-02-11 13:37:51,083 | INFO     | [payload] failed_post thread has finished
[2026-02-11 14:38:30] 2026-02-11 13:37:51,274 | INFO     | job.realtimelogging is not enabled
[2026-02-11 14:38:30] 2026-02-11 13:37:52,279 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-11 14:38:30] 2026-02-11 13:37:52,607 | INFO     | [data] queue_monitor thread has finished
[2026-02-11 14:38:30] 2026-02-11 13:38:18,607 | INFO     | PID=18001 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-11 14:38:30] 2026-02-11 13:38:18,607 | INFO     | found 0 job(s) in 20 queues
[2026-02-11 14:38:30] 2026-02-11 13:38:18,607 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-11 14:38:30] 2026-02-11 13:38:18,607 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-11 14:38:30] 2026-02-11 13:38:24,099 | INFO     | [monitor] cgroup control has ended
[2026-02-11 14:38:30] 2026-02-11 13:38:25,752 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140401020639040)>', '<ExcThread(monitor, started 140400366958336)>']
[2026-02-11 14:38:30] 2026-02-11 13:38:26,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-11 14:38:30] 2026-02-11 13:38:26,650 | INFO     | [monitor] control thread has ended
[2026-02-11 14:38:30] 2026-02-11 13:38:30,778 | INFO     | all workflow threads have been joined
[2026-02-11 14:38:30] 2026-02-11 13:38:30,778 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-11 14:38:30] 2026-02-11 13:38:30,779 | INFO     | traces error code: 0
[2026-02-11 14:38:30] 2026-02-11 13:38:30,779 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-11 14:38:30] 2026-02-11 13:38:30,859 [wrapper] ==== pilot stdout END ====
[2026-02-11 14:38:30] 2026-02-11 13:38:30,863 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-11 14:38:30] 2026-02-11 13:38:30,867 [wrapper] pilotpid: 18001
[2026-02-11 14:38:30] 2026-02-11 13:38:30,871 [wrapper] Pilot exit status: 0
[2026-02-11 14:38:30] 2026-02-11 13:38:30,883 [wrapper] pandaids: 7008401914
[2026-02-11 14:38:30] 2026-02-11 13:38:30,905 [wrapper] cleanup supervisor_pilot   27583 18002
[2026-02-11 14:38:30] 2026-02-11 13:38:30,909 [wrapper] Test setup, not cleaning
[2026-02-11 14:38:30] 2026-02-11 13:38:30,913 [wrapper] apfmon messages muted
[2026-02-11 14:38:30] 2026-02-11 13:38:30,917 [wrapper] ==== wrapper stdout END ====
[2026-02-11 14:38:30] 2026-02-11 13:38:30,921 [wrapper] ==== wrapper stderr END ====
[2026-02-11 14:38:30]  *** Error codes and diagnostics ***
[2026-02-11 14:38:30]     "exeErrorCode": 0,
[2026-02-11 14:38:30]     "exeErrorDiag": "",
[2026-02-11 14:38:30]     "pilotErrorCode": 0,
[2026-02-11 14:38:30]     "pilotErrorDiag": "",
[2026-02-11 14:38:30]  *** Listing of results directory ***
[2026-02-11 14:38:30] total 664628
[2026-02-11 14:38:30] -rw-r--r-- 1 boinc boinc    584627 Feb 11 02:48 pilot3.tar.gz
[2026-02-11 14:38:30] -rwx------ 1 boinc boinc     36322 Feb 11 02:50 runpilot2-wrapper.sh
[2026-02-11 14:38:30] -rw-r--r-- 1 boinc boinc      5111 Feb 11 02:52 queuedata.json
[2026-02-11 14:38:30] -rw-r--r-- 1 boinc boinc       100 Feb 11 13:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-11 14:38:30] -rwxr-xr-x 1 boinc boinc      7986 Feb 11 13:28 run_atlas
[2026-02-11 14:38:30] -rw-r--r-- 1 boinc boinc       105 Feb 11 13:28 job.xml
[2026-02-11 14:38:30] -rw-r--r-- 2 boinc boinc 493711256 Feb 11 13:28 EVNT.48442027._000164.pool.root.1
[2026-02-11 14:38:30] drwxrwx--x 2 boinc boinc      4096 Feb 11 13:28 shared
[2026-02-11 14:38:30] -rw-r--r-- 2 boinc boinc    597956 Feb 11 13:28 input.tar.gz
[2026-02-11 14:38:30] -rw-r--r-- 2 boinc boinc     15845 Feb 11 13:28 start_atlas.sh
[2026-02-11 14:38:30] -rw-r--r-- 1 boinc boinc         0 Feb 11 13:28 boinc_setup_complete
[2026-02-11 14:38:30] -rw-r--r-- 1 boinc boinc         0 Feb 11 13:28 boinc_lockfile
[2026-02-11 14:38:30] -rw-r--r-- 1 boinc boinc      2529 Feb 11 13:28 pandaJob.out
[2026-02-11 14:38:30] -rw------- 1 boinc boinc   1009239 Feb 11 13:28 agis_schedconf.cvmfs.json
[2026-02-11 14:38:30] -rw------- 1 boinc boinc   1512955 Feb 11 13:28 agis_ddmendpoints.agis.ALL.json
[2026-02-11 14:38:30] -rw------- 1 boinc boinc       428 Feb 11 13:28 workernode_map.json
[2026-02-11 14:38:30] drwx------ 5 boinc boinc      4096 Feb 11 13:28 pilot3
[2026-02-11 14:38:30] -rw-r--r-- 1 boinc boinc      6383 Feb 11 13:51 init_data.xml
[2026-02-11 14:38:30] -rw------- 1 boinc boinc 181118633 Feb 11 14:37 HITS.48442031._009516.pool.root.1
[2026-02-11 14:38:30] -rw-r--r-- 1 boinc boinc       530 Feb 11 14:37 boinc_task_state.xml
[2026-02-11 14:38:30] -rw------- 1 boinc boinc        95 Feb 11 14:37 pilot_heartbeat.json
[2026-02-11 14:38:30] -rw------- 1 boinc boinc      1021 Feb 11 14:37 memory_monitor_summary.json
[2026-02-11 14:38:30] -rw------- 1 boinc boinc    294529 Feb 11 14:37 log.48442031._009516.job.log.tgz.1
[2026-02-11 14:38:30] -rw------- 1 boinc boinc      6323 Feb 11 14:37 heartbeat.json
[2026-02-11 14:38:30] -rw-r--r-- 1 boinc boinc        27 Feb 11 14:38 wrapper_checkpoint.txt
[2026-02-11 14:38:30] -rw-r--r-- 1 boinc boinc      8192 Feb 11 14:38 boinc_mmap_file
[2026-02-11 14:38:30] -rw------- 1 boinc boinc      4818 Feb 11 14:38 pilotlog.txt
[2026-02-11 14:38:30] -rw------- 1 boinc boinc    617553 Feb 11 14:38 log.48442031._009516.job.log.1
[2026-02-11 14:38:30] -rw------- 1 boinc boinc       357 Feb 11 14:38 output.list
[2026-02-11 14:38:30] -rw-r--r-- 1 boinc boinc       620 Feb 11 14:38 runtime_log
[2026-02-11 14:38:30] -rw------- 1 boinc boinc    931840 Feb 11 14:38 result.tar.gz
[2026-02-11 14:38:30] -rw-r--r-- 1 boinc boinc      8901 Feb 11 14:38 runtime_log.err
[2026-02-11 14:38:30] -rw------- 1 boinc boinc       658 Feb 11 14:38 4bOMDmoXEA9n9Rq4apOajLDm4fhM0noT9bVooX4SDmyXiKDmPmasUn.diag
[2026-02-11 14:38:30] -rw-r--r-- 1 boinc boinc      7590 Feb 11 14:38 stderr.txt
[2026-02-11 14:38:30] HITS file was successfully produced:
[2026-02-11 14:38:30] -rw------- 1 boinc boinc 181118633 Feb 11 14:37 shared/HITS.pool.root.1
[2026-02-11 14:38:30]  *** Contents of shared directory: ***
[2026-02-11 14:38:30] total 660536
[2026-02-11 14:38:30] -rw-r--r-- 2 boinc boinc 493711256 Feb 11 13:28 ATLAS.root_0
[2026-02-11 14:38:30] -rw-r--r-- 2 boinc boinc    597956 Feb 11 13:28 input.tar.gz
[2026-02-11 14:38:30] -rw-r--r-- 2 boinc boinc     15845 Feb 11 13:28 start_atlas.sh
[2026-02-11 14:38:30] -rw------- 1 boinc boinc 181118633 Feb 11 14:37 HITS.pool.root.1
[2026-02-11 14:38:30] -rw------- 1 boinc boinc    931840 Feb 11 14:38 result.tar.gz
14:38:32 (14212): run_atlas exited; CPU time 15652.338374
14:38:32 (14212): called boinc_finish(0)

</stderr_txt>
]]>

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