Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
13:17:57 (1683098): wrapper (7.7.26015): starting
13:17:57 (1683098): wrapper: running run_atlas (--nthreads 4)
[2026-02-11 13:17:57] Arguments: --nthreads 4
[2026-02-11 13:17:57] Threads: 4
[2026-02-11 13:17:57] Checking for CVMFS
[2026-02-11 13:17:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 13:17:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 13:17:58] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 13:17:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 13:17:58] 2.13.1.0 3622786 7640 74116 156114 2 188 5430291 10240001 911 130560 0 5629001 99.991 258365 311 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-02-11 13:17:58] CVMFS is ok
[2026-02-11 13:17:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 13:17:58] Checking for apptainer binary...
[2026-02-11 13:17:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-11 13:17:58] Running /usr/bin/apptainer --version
[2026-02-11 13:17:58] apptainer version 1.4.5
[2026-02-11 13:17:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 13:17:58] atlas7l1
[2026-02-11 13:17:58] apptainer works
[2026-02-11 13:17:58] Set ATHENA_PROC_NUMBER=4
[2026-02-11 13:17:58] Set ATHENA_CORE_NUMBER=4
[2026-02-11 13:17:58] Starting ATLAS job with PandaID=6995304254
[2026-02-11 13:17:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-11 14:52:22]  *** The last 200 lines of the pilot log: ***
[2026-02-11 14:52:22]  guid=4fc54ce8-980d-4848-a4c5-e881eb96eb43
[2026-02-11 14:52:22]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-11 14:52:22]  is_altstaged=None
[2026-02-11 14:52:22]  is_tar=False
[2026-02-11 14:52:22]  lfn=log.48318034._008022.job.log.tgz.1
[2026-02-11 14:52:22]  mtime=0
[2026-02-11 14:52:22]  protocol_id=None
[2026-02-11 14:52:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-11 14:52:22]  replicas=None
[2026-02-11 14:52:22]  scope=mc23_13p6TeV
[2026-02-11 14:52:22]  status=None
[2026-02-11 14:52:22]  status_code=0
[2026-02-11 14:52:22]  storage_token=
[2026-02-11 14:52:22]  surl=/var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6995304254/log.48318034._008022.job.log.tgz.1
[2026-02-11 14:52:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a2/12/log.48318034._008022.job.log.tgz.1
[2026-02-11 14:52:22]  workdir=None
[2026-02-11 14:52:22] ]
[2026-02-11 14:52:22] 2026-02-11 13:51:51,336 | INFO     | transferring file log.48318034._008022.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6995304254/log.48318034._008022.job.log.tgz.1 to /var/li
[2026-02-11 14:52:22] 2026-02-11 13:51:51,336 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6995304254/log.48318034._008022.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2026-02-11 14:52:22] 2026-02-11 13:51:51,357 | INFO     | adding to output.list: log.48318034._008022.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a2/12/log.48318034._008022.job.log.tg
[2026-02-11 14:52:22] 2026-02-11 13:51:51,359 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-11 14:52:22] 2026-02-11 13:51:51,359 | INFO     | summary of transferred files:
[2026-02-11 14:52:22] 2026-02-11 13:51:51,359 | INFO     |  -- lfn=log.48318034._008022.job.log.tgz.1, status_code=0, status=transferred
[2026-02-11 14:52:22] 2026-02-11 13:51:51,359 | INFO     | stage-out finished correctly
[2026-02-11 14:52:22] 2026-02-11 13:51:51,410 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-11 14:52:22] 2026-02-11 13:51:51,942 | WARNING  | process 1691565 can no longer be monitored (due to stat problems) - aborting
[2026-02-11 14:52:22] 2026-02-11 13:51:51,942 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6995304254/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 14:52:22] 2026-02-11 13:51:52,030 | INFO     | number of running child processes to parent process 1691565: 1
[2026-02-11 14:52:22] 2026-02-11 13:51:52,030 | INFO     | maximum number of monitored processes: 6
[2026-02-11 14:52:22] 2026-02-11 13:51:52,128 | INFO     | time since job start (5624s) is within the limit (349056.0s)
[2026-02-11 14:52:22] 2026-02-11 13:51:54,118 | INFO     | job 6995304254 has state=finished
[2026-02-11 14:52:22] 2026-02-11 13:51:54,118 | INFO     | preparing for final server update for job 6995304254 in state='finished'
[2026-02-11 14:52:22] 2026-02-11 13:51:54,118 | INFO     | reading metadata from: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6995304254/jobReport.json
[2026-02-11 14:52:22] 2026-02-11 13:51:54,119 | INFO     | added worker_node to metadata from /var/lib/boinc_data/boinc-01/slots/0/workernode_map.json
[2026-02-11 14:52:22] 2026-02-11 13:51:54,120 | INFO     | this job has now completed (state=finished)
[2026-02-11 14:52:22] 2026-02-11 13:51:54,120 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-11 14:52:22] 2026-02-11 13:51:54,120 | INFO     | log transfer has been attempted: DONE
[2026-02-11 14:52:22] 2026-02-11 13:51:54,120 | INFO     | job 6995304254 has finished - writing final server update
[2026-02-11 14:52:22] 2026-02-11 13:51:54,120 | INFO     | total number of processed events: 400 (read)
[2026-02-11 14:52:22] 2026-02-11 13:51:54,121 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6995304254/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 14:52:22] 2026-02-11 13:51:54,121 | INFO     | extracted standard info from prmon json
[2026-02-11 14:52:22] 2026-02-11 13:51:54,121 | INFO     | extracted standard memory fields from prmon json
[2026-02-11 14:52:22] 2026-02-11 13:51:54,121 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-11 14:52:22] 2026-02-11 13:51:54,122 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-11 14:52:22] 2026-02-11 13:51:54,122 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-11 14:52:22] 2026-02-11 13:51:54,123 | INFO     | fitting pss+swap vs Time
[2026-02-11 14:52:22] 2026-02-11 13:51:54,123 | INFO     | sum of square deviations: 190403570.0
[2026-02-11 14:52:22] 2026-02-11 13:51:54,123 | INFO     | sum of deviations: -5001650896.999998
[2026-02-11 14:52:22] 2026-02-11 13:51:54,123 | INFO     | mean x: 1770815174.0
[2026-02-11 14:52:22] 2026-02-11 13:51:54,123 | INFO     | mean y: 2370257.6705882354
[2026-02-11 14:52:22] 2026-02-11 13:51:54,123 | INFO     | intersect: 46519351548.82131
[2026-02-11 14:52:22] 2026-02-11 13:51:54,123 | INFO     | chi2: 0.04393979423043282
[2026-02-11 14:52:22] 2026-02-11 13:51:54,123 | INFO     | current memory leak: -26.27 B/s (using 85 data points, chi2=0.04)
[2026-02-11 14:52:22] 2026-02-11 13:51:54,123 | INFO     | could have reported an average CPU frequency of 2400 MHz (7 samples)
[2026-02-11 14:52:22] 2026-02-11 13:51:54,123 | INFO     | ..............................
[2026-02-11 14:52:22] 2026-02-11 13:51:54,123 | INFO     | . Timing measurements:
[2026-02-11 14:52:22] 2026-02-11 13:51:54,124 | INFO     | . get job = 0 s
[2026-02-11 14:52:22] 2026-02-11 13:51:54,124 | INFO     | . initial setup = 3 s
[2026-02-11 14:52:22] 2026-02-11 13:51:54,124 | INFO     | . payload setup = 4 s
[2026-02-11 14:52:22] 2026-02-11 13:51:54,124 | INFO     | . stage-in = 0 s
[2026-02-11 14:52:22] 2026-02-11 13:51:54,124 | INFO     | . payload execution = 5602 s
[2026-02-11 14:52:22] 2026-02-11 13:51:54,124 | INFO     | . stage-out = 0 s
[2026-02-11 14:52:22] 2026-02-11 13:51:54,124 | INFO     | . log creation = 0 s
[2026-02-11 14:52:22] 2026-02-11 13:51:54,124 | INFO     | ..............................
[2026-02-11 14:52:22] 2026-02-11 13:51:54,139 | INFO     | time since job start (5626s) is within the limit (349056.0s)
[2026-02-11 14:52:22] 2026-02-11 13:51:54,181 | INFO     | 
[2026-02-11 14:52:22] 2026-02-11 13:51:54,182 | INFO     | job summary report
[2026-02-11 14:52:22] 2026-02-11 13:51:54,182 | INFO     | --------------------------------------------------
[2026-02-11 14:52:22] 2026-02-11 13:51:54,182 | INFO     | PanDA job id: 6995304254
[2026-02-11 14:52:22] 2026-02-11 13:51:54,182 | INFO     | task id: 48318034
[2026-02-11 14:52:22] 2026-02-11 13:51:54,182 | INFO     | errors: (none)
[2026-02-11 14:52:22] 2026-02-11 13:51:54,183 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-11 14:52:22] 2026-02-11 13:51:54,183 | INFO     | pilot state: finished 
[2026-02-11 14:52:22] 2026-02-11 13:51:54,183 | INFO     | transexitcode: 0
[2026-02-11 14:52:22] 2026-02-11 13:51:54,183 | INFO     | exeerrorcode: 0
[2026-02-11 14:52:22] 2026-02-11 13:51:54,183 | INFO     | exeerrordiag: 
[2026-02-11 14:52:22] 2026-02-11 13:51:54,183 | INFO     | exitcode: 0
[2026-02-11 14:52:22] 2026-02-11 13:51:54,183 | INFO     | exitmsg: OK
[2026-02-11 14:52:22] 2026-02-11 13:51:54,183 | INFO     | cpuconsumptiontime: 21308 s
[2026-02-11 14:52:22] 2026-02-11 13:51:54,183 | INFO     | nevents: 400
[2026-02-11 14:52:22] 2026-02-11 13:51:54,184 | INFO     | neventsw: 0
[2026-02-11 14:52:22] 2026-02-11 13:51:54,184 | INFO     | pid: 1691565
[2026-02-11 14:52:22] 2026-02-11 13:51:54,184 | INFO     | pgrp: 1691565
[2026-02-11 14:52:22] 2026-02-11 13:51:54,184 | INFO     | corecount: 4
[2026-02-11 14:52:22] 2026-02-11 13:51:54,184 | INFO     | event service: False
[2026-02-11 14:52:22] 2026-02-11 13:51:54,184 | INFO     | sizes: {0: 2282195, 11: 2282195, 5610: 2308939, 5611: 2317965, 5612: 2318021, 5614: 2318215}
[2026-02-11 14:52:22] 2026-02-11 13:51:54,184 | INFO     | --------------------------------------------------
[2026-02-11 14:52:22] 2026-02-11 13:51:54,184 | INFO     | 
[2026-02-11 14:52:22] 2026-02-11 13:51:54,185 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/0
[2026-02-11 14:52:22] 2026-02-11 13:51:54,206 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-11 14:52:22] 2026-02-11 13:51:54,206 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-11 14:52:22] 2026-02-11 13:51:54,206 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-11 14:52:22] 2026-02-11 13:51:54,206 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-11 14:52:22] 2026-02-11 13:51:54,206 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-11 14:52:22] 2026-02-11 13:51:54,206 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-11 14:52:22] 2026-02-11 13:51:54,206 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-11 14:52:22] 2026-02-11 13:51:54,206 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-11 14:52:22] 2026-02-11 13:51:54,206 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-11 14:52:22] 2026-02-11 13:51:54,206 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-11 14:52:22] 2026-02-11 13:51:54,206 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-11 14:52:22] 2026-02-11 13:51:54,206 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-11 14:52:22] 2026-02-11 13:51:54,206 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-11 14:52:22] 2026-02-11 13:51:54,206 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-11 14:52:22] 2026-02-11 13:51:54,206 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-11 14:52:22] 2026-02-11 13:51:54,206 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-11 14:52:22] 2026-02-11 13:51:54,206 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-11 14:52:22] 2026-02-11 13:51:54,206 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-11 14:52:22] 2026-02-11 13:51:54,207 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-11 14:52:22] 2026-02-11 13:51:54,207 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-11 14:52:22] 2026-02-11 13:51:54,207 | INFO     | job 6995304254 has completed (purged errors)
[2026-02-11 14:52:22] 2026-02-11 13:51:54,207 | INFO     | overall cleanup function is called
[2026-02-11 14:52:22] 2026-02-11 13:51:55,213 | INFO     | --- collectZombieJob: --- 10, [1691565]
[2026-02-11 14:52:22] 2026-02-11 13:51:55,214 | INFO     | zombie collector waiting for pid 1691565
[2026-02-11 14:52:22] 2026-02-11 13:51:55,214 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-11 14:52:22] 2026-02-11 13:51:55,214 | INFO     | collected zombie processes
[2026-02-11 14:52:22] 2026-02-11 13:51:55,214 | INFO     | will attempt to kill all subprocesses of pid=1691565
[2026-02-11 14:52:22] 2026-02-11 13:51:55,298 | INFO     | process IDs to be killed: [1691565] (in reverse order)
[2026-02-11 14:52:22] 2026-02-11 13:51:55,334 | WARNING  | found no corresponding commands to process id(s)
[2026-02-11 14:52:22] 2026-02-11 13:51:55,334 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-11 14:52:22] 2026-02-11 13:51:55,337 | INFO     | did not find any defunct processes belonging to 1691565
[2026-02-11 14:52:22] 2026-02-11 13:51:55,339 | INFO     | did not find any defunct processes belonging to 1691565
[2026-02-11 14:52:22] 2026-02-11 13:51:55,339 | INFO     | ready for new job
[2026-02-11 14:52:22] 2026-02-11 13:51:55,339 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-11 14:52:22] 2026-02-11 13:51:55,340 | INFO     | **************************************
[2026-02-11 14:52:22] 2026-02-11 13:51:55,340 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-11 14:52:22] 2026-02-11 13:51:55,340 | INFO     | **************************************
[2026-02-11 14:52:22] 2026-02-11 13:51:55,340 | INFO     | 
[2026-02-11 14:52:22] 2026-02-11 13:51:55,341 | INFO     | pilot is running in a VM
[2026-02-11 14:52:22] 2026-02-11 13:51:55,341 | INFO     | architecture information:
[2026-02-11 14:52:22] 2026-02-11 13:51:55,341 | INFO     | executing command: cat /etc/os-release
[2026-02-11 14:52:22] 2026-02-11 13:51:55,355 | INFO     | cat /etc/os-release:
[2026-02-11 14:52:22] NAME="CentOS Linux"
[2026-02-11 14:52:22] VERSION="7 (Core)"
[2026-02-11 14:52:22] ID="centos"
[2026-02-11 14:52:22] ID_LIKE="rhel fedora"
[2026-02-11 14:52:22] VERSION_ID="7"
[2026-02-11 14:52:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-11 14:52:22] ANSI_COLOR="0;31"
[2026-02-11 14:52:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-11 14:52:22] HOME_URL="https://www.centos.org/"
[2026-02-11 14:52:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-11 14:52:22] 
[2026-02-11 14:52:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-11 14:52:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-11 14:52:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-11 14:52:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-11 14:52:22] 
[2026-02-11 14:52:22] 2026-02-11 13:51:55,355 | INFO     | **************************************
[2026-02-11 14:52:22] 2026-02-11 13:51:55,858 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/0
[2026-02-11 14:52:22] 2026-02-11 13:51:55,872 | INFO     | sufficient remaining disk space (149165178880 B)
[2026-02-11 14:52:22] 2026-02-11 13:51:55,873 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-11 14:52:22] 2026-02-11 13:51:55,873 | INFO     | current server update state: UPDATING_FINAL
[2026-02-11 14:52:22] 2026-02-11 13:51:55,873 | INFO     | update_server=False
[2026-02-11 14:52:22] 2026-02-11 13:51:55,874 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-11 14:52:22] 2026-02-11 13:51:55,874 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-11 14:52:22] 2026-02-11 13:51:55,875 | INFO     | found 0 job(s) in 20 queues
[2026-02-11 14:52:22] 2026-02-11 13:51:55,875 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-11 14:52:22] 2026-02-11 13:51:55,875 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-11 14:52:22] 2026-02-11 13:51:55,875 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-11 14:52:22] 2026-02-11 13:51:55,876 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-11 14:52:22] 2026-02-11 13:51:55,876 | INFO     | aborting loop
[2026-02-11 14:52:22] 2026-02-11 13:51:56,217 | INFO     | all data control threads have been joined
[2026-02-11 14:52:22] 2026-02-11 13:51:56,427 | INFO     | all payload control threads have been joined
[2026-02-11 14:52:22] 2026-02-11 13:51:56,878 | INFO     | [job] retrieve thread has finished
[2026-02-11 14:52:22] 2026-02-11 13:51:56,879 | INFO     | [job] job monitor thread has finished
[2026-02-11 14:52:22] 2026-02-11 13:51:56,882 | INFO     | [job] queue monitor thread has finished
[2026-02-11 14:52:22] 2026-02-11 13:51:56,903 | INFO     | [job] validate thread has finished
[2026-02-11 14:52:22] 2026-02-11 13:51:56,904 | INFO     | [job] create_data_payload thread has finished
[2026-02-11 14:52:22] 2026-02-11 13:51:56,916 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-11 14:52:22] 2026-02-11 13:51:57,052 | INFO     | [payload] execute_payloads thread has finished
[2026-02-11 14:52:22] 2026-02-11 13:51:57,135 | INFO     | [payload] validate_pre thread has finished
[2026-02-11 14:52:22] 2026-02-11 13:51:57,177 | INFO     | [data] copytool_in thread has finished
[2026-02-11 14:52:22] 2026-02-11 13:51:57,223 | INFO     | [data] control thread has finished
[2026-02-11 14:52:22] 2026-02-11 13:51:57,262 | INFO     | all job control threads have been joined
[2026-02-11 14:52:22] 2026-02-11 13:51:57,404 | INFO     | [payload] failed_post thread has finished
[2026-02-11 14:52:22] 2026-02-11 13:51:57,432 | INFO     | [payload] control thread has finished
[2026-02-11 14:52:22] 2026-02-11 13:51:57,458 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-11 14:52:22] 2026-02-11 13:51:57,513 | INFO     | [payload] validate_post thread has finished
[2026-02-11 14:52:22] 2026-02-11 13:51:57,837 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-11 14:52:22] 2026-02-11 13:51:58,264 | INFO     | [job] control thread has finished
[2026-02-11 14:52:22] 2026-02-11 13:51:58,921 | INFO     | [data] copytool_out thread has finished
[2026-02-11 14:52:22] 2026-02-11 13:52:01,465 | INFO     | [data] queue_monitor thread has finished
[2026-02-11 14:52:22] 2026-02-11 13:52:17,056 | INFO     | [monitor] cgroup control has ended
[2026-02-11 14:52:22] 2026-02-11 13:52:17,323 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131164249786176)>', '<ExcThread(monitor, started 131163897177856)>']
[2026-02-11 14:52:22] 2026-02-11 13:52:17,967 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-11 14:52:22] 2026-02-11 13:52:17,967 | INFO     | [monitor] control thread has ended
[2026-02-11 14:52:22] 2026-02-11 13:52:22,339 | INFO     | all workflow threads have been joined
[2026-02-11 14:52:22] 2026-02-11 13:52:22,339 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-11 14:52:22] 2026-02-11 13:52:22,339 | INFO     | traces error code: 0
[2026-02-11 14:52:22] 2026-02-11 13:52:22,340 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-11 14:52:22] 2026-02-11 13:52:22,410 [wrapper] ==== pilot stdout END ====
[2026-02-11 14:52:22] 2026-02-11 13:52:22,413 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-11 14:52:22] 2026-02-11 13:52:22,417 [wrapper] pilotpid: 1687076
[2026-02-11 14:52:22] 2026-02-11 13:52:22,420 [wrapper] Pilot exit status: 0
[2026-02-11 14:52:22] 2026-02-11 13:52:22,435 [wrapper] pandaids: 6995304254
[2026-02-11 14:52:22] 2026-02-11 13:52:22,461 [wrapper] cleanup supervisor_pilot 1702148 1687077
[2026-02-11 14:52:22] 2026-02-11 13:52:22,463 [wrapper] Test setup, not cleaning
[2026-02-11 14:52:22] 2026-02-11 13:52:22,465 [wrapper] apfmon messages muted
[2026-02-11 14:52:22] 2026-02-11 13:52:22,466 [wrapper] ==== wrapper stdout END ====
[2026-02-11 14:52:22] 2026-02-11 13:52:22,468 [wrapper] ==== wrapper stderr END ====
[2026-02-11 14:52:22]  *** Error codes and diagnostics ***
[2026-02-11 14:52:22]     "exeErrorCode": 0,
[2026-02-11 14:52:22]     "exeErrorDiag": "",
[2026-02-11 14:52:22]     "pilotErrorCode": 0,
[2026-02-11 14:52:22]     "pilotErrorDiag": "",
[2026-02-11 14:52:22]  *** Listing of results directory ***
[2026-02-11 14:52:22] insgesamt 674052
[2026-02-11 14:52:22] -rw-r--r-- 1 yeti boinc    584422 Feb  4 04:08 pilot3.tar.gz
[2026-02-11 14:52:22] -rwx------ 1 yeti boinc     36322 Feb  4 04:09 runpilot2-wrapper.sh
[2026-02-11 14:52:22] -rw-r--r-- 1 yeti boinc      5111 Feb  4 04:09 queuedata.json
[2026-02-11 14:52:22] -rw-r--r-- 1 yeti boinc       100 Feb 11 13:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-11 14:52:22] -rwxr-xr-x 1 yeti boinc      7986 Feb 11 13:17 run_atlas
[2026-02-11 14:52:22] -rw-r--r-- 1 yeti boinc       105 Feb 11 13:17 job.xml
[2026-02-11 14:52:22] drwxrwx--x 2 yeti boinc      4096 Feb 11 13:17 shared
[2026-02-11 14:52:22] -rw-r--r-- 2 yeti boinc    597769 Feb 11 13:17 input.tar.gz
[2026-02-11 14:52:22] -rw-r--r-- 2 yeti boinc 500432324 Feb 11 13:17 EVNT.48318032._000168.pool.root.1
[2026-02-11 14:52:22] -rw-r--r-- 2 yeti boinc     15845 Feb 11 13:17 start_atlas.sh
[2026-02-11 14:52:22] -rw-r--r-- 1 yeti boinc      6618 Feb 11 13:17 init_data.xml
[2026-02-11 14:52:22] -rw-r--r-- 1 yeti boinc         0 Feb 11 13:17 boinc_setup_complete
[2026-02-11 14:52:22] -rw-r--r-- 1 yeti boinc         0 Feb 11 13:17 boinc_lockfile
[2026-02-11 14:52:22] -rw-r--r-- 1 yeti boinc      2536 Feb 11 13:17 pandaJob.out
[2026-02-11 14:52:22] -rw------- 1 yeti boinc        52 Feb 11 13:17 setup.sh.local
[2026-02-11 14:52:22] -rw------- 1 yeti boinc   1009239 Feb 11 13:18 agis_schedconf.cvmfs.json
[2026-02-11 14:52:22] -rw------- 1 yeti boinc   1512955 Feb 11 13:18 agis_ddmendpoints.agis.ALL.json
[2026-02-11 14:52:22] -rw------- 1 yeti boinc       419 Feb 11 13:18 workernode_map.json
[2026-02-11 14:52:22] drwx------ 5 yeti boinc      4096 Feb 11 13:18 pilot3
[2026-02-11 14:52:22] -rw-r--r-- 1 yeti boinc       530 Feb 11 14:51 boinc_task_state.xml
[2026-02-11 14:52:22] -rw------- 1 yeti boinc 183555168 Feb 11 14:51 HITS.48318034._008022.pool.root.1
[2026-02-11 14:52:22] -rw------- 1 yeti boinc      1027 Feb 11 14:51 memory_monitor_summary.json
[2026-02-11 14:52:22] -rw------- 1 yeti boinc        95 Feb 11 14:51 pilot_heartbeat.json
[2026-02-11 14:52:22] -rw------- 1 yeti boinc    304535 Feb 11 14:51 log.48318034._008022.job.log.tgz.1
[2026-02-11 14:52:22] -rw------- 1 yeti boinc      6315 Feb 11 14:51 heartbeat.json
[2026-02-11 14:52:22] -rw-r--r-- 1 yeti boinc      8192 Feb 11 14:52 boinc_mmap_file
[2026-02-11 14:52:22] -rw-r--r-- 1 yeti boinc        27 Feb 11 14:52 wrapper_checkpoint.txt
[2026-02-11 14:52:22] -rw------- 1 yeti boinc      4625 Feb 11 14:52 pilotlog.txt
[2026-02-11 14:52:22] -rw------- 1 yeti boinc    841108 Feb 11 14:52 log.48318034._008022.job.log.1
[2026-02-11 14:52:22] -rw------- 1 yeti boinc       357 Feb 11 14:52 output.list
[2026-02-11 14:52:22] -rw-r--r-- 1 yeti boinc       620 Feb 11 14:52 runtime_log
[2026-02-11 14:52:22] -rw------- 1 yeti boinc   1167360 Feb 11 14:52 result.tar.gz
[2026-02-11 14:52:22] -rw-r--r-- 1 yeti boinc      9544 Feb 11 14:52 runtime_log.err
[2026-02-11 14:52:22] -rw------- 1 yeti boinc       639 Feb 11 14:52 NvQKDmiRi78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm9ZWKDmrb9yzn.diag
[2026-02-11 14:52:22] -rw-r--r-- 1 yeti boinc     21100 Feb 11 14:52 stderr.txt
[2026-02-11 14:52:22] HITS file was successfully produced:
[2026-02-11 14:52:22] -rw------- 1 yeti boinc 183555168 Feb 11 14:51 shared/HITS.pool.root.1
[2026-02-11 14:52:22]  *** Contents of shared directory: ***
[2026-02-11 14:52:22] insgesamt 669708
[2026-02-11 14:52:22] -rw-r--r-- 2 yeti boinc    597769 Feb 11 13:17 input.tar.gz
[2026-02-11 14:52:22] -rw-r--r-- 2 yeti boinc 500432324 Feb 11 13:17 ATLAS.root_0
[2026-02-11 14:52:22] -rw-r--r-- 2 yeti boinc     15845 Feb 11 13:17 start_atlas.sh
[2026-02-11 14:52:22] -rw------- 1 yeti boinc 183555168 Feb 11 14:51 HITS.pool.root.1
[2026-02-11 14:52:22] -rw------- 1 yeti boinc   1167360 Feb 11 14:52 result.tar.gz
14:52:23 (1683098): run_atlas exited; CPU time 21379.593857
14:52:23 (1683098): called boinc_finish(0)

</stderr_txt>
]]>

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