Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:32:29 (427761): wrapper (7.7.26015): starting
03:32:29 (427761): wrapper: running run_atlas (--nthreads 4)
[2026-02-11 03:32:29] Arguments: --nthreads 4
[2026-02-11 03:32:29] Threads: 4
[2026-02-11 03:32:29] Checking for CVMFS
[2026-02-11 03:32:29] No cvmfs_config command found, will try listing directly
[2026-02-11 03:32:29] CVMFS is ok
[2026-02-11 03:32:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-11 03:32:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-11 03:32:29] Further information can be found at the LHC@home message board.
[2026-02-11 03:32:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 03:32:29] Checking for apptainer binary...
[2026-02-11 03:32:29] which: no apptainer in ((null))
[2026-02-11 03:32:29] apptainer is not installed, using version from CVMFS
[2026-02-11 03:32:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 03:32:29] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-02-11 03:32:29] apptainer works
[2026-02-11 03:32:29] Set ATHENA_PROC_NUMBER=4
[2026-02-11 03:32:29] Set ATHENA_CORE_NUMBER=4
[2026-02-11 03:32:29] Starting ATLAS job with PandaID=7008106521
[2026-02-11 03:32:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-11 05:03:55]  *** The last 200 lines of the pilot log: ***
[2026-02-11 05:03:55]  filesize=318711
[2026-02-11 05:03:55]  filetype=log
[2026-02-11 05:03:55]  guid=91e8966d-c8ac-4c5f-afe0-a2da9bfc6b49
[2026-02-11 05:03:55]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-11 05:03:55]  is_altstaged=None
[2026-02-11 05:03:55]  is_tar=False
[2026-02-11 05:03:55]  lfn=log.48318034._015545.job.log.tgz.1
[2026-02-11 05:03:55]  mtime=0
[2026-02-11 05:03:55]  protocol_id=None
[2026-02-11 05:03:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-11 05:03:55]  replicas=None
[2026-02-11 05:03:55]  scope=mc23_13p6TeV
[2026-02-11 05:03:55]  status=None
[2026-02-11 05:03:55]  status_code=0
[2026-02-11 05:03:55]  storage_token=
[2026-02-11 05:03:55]  surl=/scratch/boinc/var/slot52/slots/0/PanDA_Pilot-7008106521/log.48318034._015545.job.log.tgz.1
[2026-02-11 05:03:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/03/log.48318034._015545.job.log.tgz.1
[2026-02-11 05:03:55]  workdir=None
[2026-02-11 05:03:55] ]
[2026-02-11 05:03:55] 2026-02-11 04:03:12,954 | INFO     | transferring file log.48318034._015545.job.log.tgz.1 from /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-7008106521/log.48318034._015545.job.log.tgz.1 to /scratch/b
[2026-02-11 05:03:55] 2026-02-11 04:03:12,954 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-7008106521/log.48318034._015545.job.log.tgz.1 /scratch/boinc/var/slot52/slots/0/lo
[2026-02-11 05:03:55] 2026-02-11 04:03:12,973 | INFO     | adding to output.list: log.48318034._015545.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/03/log.48318034._015545.job.log.tg
[2026-02-11 05:03:55] 2026-02-11 04:03:12,974 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-11 05:03:55] 2026-02-11 04:03:12,974 | INFO     | summary of transferred files:
[2026-02-11 05:03:55] 2026-02-11 04:03:12,974 | INFO     |  -- lfn=log.48318034._015545.job.log.tgz.1, status_code=0, status=transferred
[2026-02-11 05:03:55] 2026-02-11 04:03:12,974 | INFO     | stage-out finished correctly
[2026-02-11 05:03:55] 2026-02-11 04:03:14,212 | INFO     | time since job start (5433s) is within the limit (349056.0s)
[2026-02-11 05:03:55] 2026-02-11 04:03:14,289 | INFO     | monitor loop #403: job 0:7008106521 is in state 'finished'
[2026-02-11 05:03:55] 2026-02-11 04:03:14,289 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-11 05:03:55] 2026-02-11 04:03:14,713 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-11 05:03:55] 2026-02-11 04:03:15,785 | INFO     | job 7008106521 has state=finished
[2026-02-11 05:03:55] 2026-02-11 04:03:15,786 | INFO     | preparing for final server update for job 7008106521 in state='finished'
[2026-02-11 05:03:55] 2026-02-11 04:03:15,786 | INFO     | reading metadata from: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-7008106521/jobReport.json
[2026-02-11 05:03:55] 2026-02-11 04:03:15,788 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot52/slots/0/workernode_map.json
[2026-02-11 05:03:55] 2026-02-11 04:03:15,788 | INFO     | this job has now completed (state=finished)
[2026-02-11 05:03:55] 2026-02-11 04:03:15,789 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-11 05:03:55] 2026-02-11 04:03:15,789 | INFO     | log transfer has been attempted: DONE
[2026-02-11 05:03:55] 2026-02-11 04:03:15,789 | INFO     | job 7008106521 has finished - writing final server update
[2026-02-11 05:03:55] 2026-02-11 04:03:15,789 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_8130/.job.ad'
[2026-02-11 05:03:55] 2026-02-11 04:03:15,789 | INFO     | total number of processed events: 400 (read)
[2026-02-11 05:03:55] 2026-02-11 04:03:15,808 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-7008106521/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 05:03:55] 2026-02-11 04:03:15,809 | INFO     | extracted standard info from prmon json
[2026-02-11 05:03:55] 2026-02-11 04:03:15,809 | INFO     | extracted standard memory fields from prmon json
[2026-02-11 05:03:55] 2026-02-11 04:03:15,809 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-11 05:03:55] 2026-02-11 04:03:15,809 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-11 05:03:55] 2026-02-11 04:03:15,809 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-11 05:03:55] 2026-02-11 04:03:15,810 | INFO     | fitting pss+swap vs Time
[2026-02-11 05:03:55] 2026-02-11 04:03:15,810 | INFO     | sum of square deviations: 170944600.5
[2026-02-11 05:03:55] 2026-02-11 04:03:15,811 | INFO     | sum of deviations: -1386341845.5
[2026-02-11 05:03:55] 2026-02-11 04:03:15,811 | INFO     | mean x: 1770779957.5
[2026-02-11 05:03:55] 2026-02-11 04:03:15,811 | INFO     | mean y: 2360195.8902439023
[2026-02-11 05:03:55] 2026-02-11 04:03:15,811 | INFO     | intersect: 14363190237.169971
[2026-02-11 05:03:55] 2026-02-11 04:03:15,811 | INFO     | chi2: 0.005198587571821765
[2026-02-11 05:03:55] 2026-02-11 04:03:15,811 | INFO     | current memory leak: -8.11 B/s (using 82 data points, chi2=0.01)
[2026-02-11 05:03:55] 2026-02-11 04:03:15,811 | INFO     | could have reported an average CPU frequency of 2996 MHz (7 samples)
[2026-02-11 05:03:55] 2026-02-11 04:03:15,811 | INFO     | ..............................
[2026-02-11 05:03:55] 2026-02-11 04:03:15,811 | INFO     | . Timing measurements:
[2026-02-11 05:03:55] 2026-02-11 04:03:15,812 | INFO     | . get job = 0 s
[2026-02-11 05:03:55] 2026-02-11 04:03:15,812 | INFO     | . initial setup = 5 s
[2026-02-11 05:03:55] 2026-02-11 04:03:15,812 | INFO     | . payload setup = 4 s
[2026-02-11 05:03:55] 2026-02-11 04:03:15,812 | INFO     | . stage-in = 0 s
[2026-02-11 05:03:55] 2026-02-11 04:03:15,812 | INFO     | . payload execution = 5411 s
[2026-02-11 05:03:55] 2026-02-11 04:03:15,812 | INFO     | . stage-out = 0 s
[2026-02-11 05:03:55] 2026-02-11 04:03:15,812 | INFO     | . log creation = 0 s
[2026-02-11 05:03:55] 2026-02-11 04:03:15,812 | INFO     | ..............................
[2026-02-11 05:03:55] 2026-02-11 04:03:15,868 | INFO     | 
[2026-02-11 05:03:55] 2026-02-11 04:03:15,869 | INFO     | job summary report
[2026-02-11 05:03:55] 2026-02-11 04:03:15,869 | INFO     | --------------------------------------------------
[2026-02-11 05:03:55] 2026-02-11 04:03:15,869 | INFO     | PanDA job id: 7008106521
[2026-02-11 05:03:55] 2026-02-11 04:03:15,869 | INFO     | task id: 48318034
[2026-02-11 05:03:55] 2026-02-11 04:03:15,869 | INFO     | errors: (none)
[2026-02-11 05:03:55] 2026-02-11 04:03:15,869 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-11 05:03:55] 2026-02-11 04:03:15,869 | INFO     | pilot state: finished 
[2026-02-11 05:03:55] 2026-02-11 04:03:15,869 | INFO     | transexitcode: 0
[2026-02-11 05:03:55] 2026-02-11 04:03:15,869 | INFO     | exeerrorcode: 0
[2026-02-11 05:03:55] 2026-02-11 04:03:15,869 | INFO     | exeerrordiag: 
[2026-02-11 05:03:55] 2026-02-11 04:03:15,869 | INFO     | exitcode: 0
[2026-02-11 05:03:55] 2026-02-11 04:03:15,869 | INFO     | exitmsg: OK
[2026-02-11 05:03:55] 2026-02-11 04:03:15,869 | INFO     | cpuconsumptiontime: 20675 s
[2026-02-11 05:03:55] 2026-02-11 04:03:15,869 | INFO     | nevents: 400
[2026-02-11 05:03:55] 2026-02-11 04:03:15,870 | INFO     | neventsw: 0
[2026-02-11 05:03:55] 2026-02-11 04:03:15,870 | INFO     | pid: 472815
[2026-02-11 05:03:55] 2026-02-11 04:03:15,870 | INFO     | pgrp: 472815
[2026-02-11 05:03:55] 2026-02-11 04:03:15,870 | INFO     | corecount: 4
[2026-02-11 05:03:55] 2026-02-11 04:03:15,870 | INFO     | event service: False
[2026-02-11 05:03:55] 2026-02-11 04:03:15,870 | INFO     | sizes: {0: 2282196, 11: 2282196, 5419: 2308909, 5420: 2317929, 5422: 2317985, 5423: 2318179}
[2026-02-11 05:03:55] 2026-02-11 04:03:15,870 | INFO     | --------------------------------------------------
[2026-02-11 05:03:55] 2026-02-11 04:03:15,870 | INFO     | 
[2026-02-11 05:03:55] 2026-02-11 04:03:15,870 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2026-02-11 05:03:55] 2026-02-11 04:03:15,891 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-11 05:03:55] 2026-02-11 04:03:15,892 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-11 05:03:55] 2026-02-11 04:03:15,892 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-11 05:03:55] 2026-02-11 04:03:15,892 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-11 05:03:55] 2026-02-11 04:03:15,892 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-11 05:03:55] 2026-02-11 04:03:15,892 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-11 05:03:55] 2026-02-11 04:03:15,892 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-11 05:03:55] 2026-02-11 04:03:15,892 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-11 05:03:55] 2026-02-11 04:03:15,892 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-11 05:03:55] 2026-02-11 04:03:15,892 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-11 05:03:55] 2026-02-11 04:03:15,892 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-11 05:03:55] 2026-02-11 04:03:15,892 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-11 05:03:55] 2026-02-11 04:03:15,893 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-11 05:03:55] 2026-02-11 04:03:15,893 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-11 05:03:55] 2026-02-11 04:03:15,893 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-11 05:03:55] 2026-02-11 04:03:15,893 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-11 05:03:55] 2026-02-11 04:03:15,893 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-11 05:03:55] 2026-02-11 04:03:15,893 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-11 05:03:55] 2026-02-11 04:03:15,893 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-11 05:03:55] 2026-02-11 04:03:15,893 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-11 05:03:55] 2026-02-11 04:03:15,893 | INFO     | job 7008106521 has completed (purged errors)
[2026-02-11 05:03:55] 2026-02-11 04:03:15,893 | INFO     | overall cleanup function is called
[2026-02-11 05:03:55] 2026-02-11 04:03:16,902 | INFO     | --- collectZombieJob: --- 10, [472815]
[2026-02-11 05:03:55] 2026-02-11 04:03:16,902 | INFO     | zombie collector waiting for pid 472815
[2026-02-11 05:03:55] 2026-02-11 04:03:16,902 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-11 05:03:55] 2026-02-11 04:03:16,902 | INFO     | collected zombie processes
[2026-02-11 05:03:55] 2026-02-11 04:03:16,903 | INFO     | will attempt to kill all subprocesses of pid=472815
[2026-02-11 05:03:55] 2026-02-11 04:03:17,232 | INFO     | process IDs to be killed: [472815] (in reverse order)
[2026-02-11 05:03:55] 2026-02-11 04:03:17,369 | WARNING  | found no corresponding commands to process id(s)
[2026-02-11 05:03:55] 2026-02-11 04:03:17,369 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-11 05:03:55] 2026-02-11 04:03:17,383 | INFO     | did not find any defunct processes belonging to 472815
[2026-02-11 05:03:55] 2026-02-11 04:03:17,393 | INFO     | did not find any defunct processes belonging to 472815
[2026-02-11 05:03:55] 2026-02-11 04:03:17,393 | INFO     | ready for new job
[2026-02-11 05:03:55] 2026-02-11 04:03:17,393 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-11 05:03:55] 2026-02-11 04:03:17,395 | INFO     | **************************************
[2026-02-11 05:03:55] 2026-02-11 04:03:17,395 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-11 05:03:55] 2026-02-11 04:03:17,395 | INFO     | **************************************
[2026-02-11 05:03:55] 2026-02-11 04:03:17,395 | INFO     | 
[2026-02-11 05:03:55] 2026-02-11 04:03:17,400 | INFO     | architecture information:
[2026-02-11 05:03:55] 2026-02-11 04:03:17,400 | INFO     | executing command: cat /etc/os-release
[2026-02-11 05:03:55] 2026-02-11 04:03:17,414 | INFO     | cat /etc/os-release:
[2026-02-11 05:03:55] NAME="CentOS Linux"
[2026-02-11 05:03:55] VERSION="7 (Core)"
[2026-02-11 05:03:55] ID="centos"
[2026-02-11 05:03:55] ID_LIKE="rhel fedora"
[2026-02-11 05:03:55] VERSION_ID="7"
[2026-02-11 05:03:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-11 05:03:55] ANSI_COLOR="0;31"
[2026-02-11 05:03:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-11 05:03:55] HOME_URL="https://www.centos.org/"
[2026-02-11 05:03:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-11 05:03:55] 
[2026-02-11 05:03:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-11 05:03:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-11 05:03:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-11 05:03:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-11 05:03:55] 
[2026-02-11 05:03:55] 2026-02-11 04:03:17,415 | INFO     | **************************************
[2026-02-11 05:03:55] 2026-02-11 04:03:17,918 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2026-02-11 05:03:55] 2026-02-11 04:03:17,934 | INFO     | sufficient remaining disk space (3237565431808 B)
[2026-02-11 05:03:55] 2026-02-11 04:03:17,934 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-11 05:03:55] 2026-02-11 04:03:17,934 | INFO     | current server update state: UPDATING_FINAL
[2026-02-11 05:03:55] 2026-02-11 04:03:17,934 | INFO     | update_server=False
[2026-02-11 05:03:55] 2026-02-11 04:03:17,934 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-11 05:03:55] 2026-02-11 04:03:17,935 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-11 05:03:55] 2026-02-11 04:03:17,935 | INFO     | aborting loop
[2026-02-11 05:03:55] 2026-02-11 04:03:18,140 | INFO     | all data control threads have been joined
[2026-02-11 05:03:55] 2026-02-11 04:03:18,540 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-11 05:03:55] 2026-02-11 04:03:18,578 | INFO     | all payload control threads have been joined
[2026-02-11 05:03:55] 2026-02-11 04:03:18,939 | INFO     | [job] retrieve thread has finished
[2026-02-11 05:03:55] 2026-02-11 04:03:18,940 | INFO     | [job] job monitor thread has finished
[2026-02-11 05:03:55] 2026-02-11 04:03:18,963 | INFO     | [payload] failed_post thread has finished
[2026-02-11 05:03:55] 2026-02-11 04:03:18,967 | INFO     | all job control threads have been joined
[2026-02-11 05:03:55] 2026-02-11 04:03:19,145 | INFO     | [data] control thread has finished
[2026-02-11 05:03:55] 2026-02-11 04:03:19,342 | INFO     | [payload] execute_payloads thread has finished
[2026-02-11 05:03:55] 2026-02-11 04:03:19,583 | INFO     | [payload] control thread has finished
[2026-02-11 05:03:55] 2026-02-11 04:03:19,762 | INFO     | [job] validate thread has finished
[2026-02-11 05:03:55] 2026-02-11 04:03:19,784 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-11 05:03:55] 2026-02-11 04:03:19,828 | INFO     | [payload] validate_post thread has finished
[2026-02-11 05:03:55] 2026-02-11 04:03:19,959 | INFO     | [job] create_data_payload thread has finished
[2026-02-11 05:03:55] 2026-02-11 04:03:19,972 | INFO     | [job] control thread has finished
[2026-02-11 05:03:55] 2026-02-11 04:03:20,045 | INFO     | [payload] validate_pre thread has finished
[2026-02-11 05:03:55] 2026-02-11 04:03:20,370 | INFO     | [data] copytool_in thread has finished
[2026-02-11 05:03:55] 2026-02-11 04:03:20,545 | INFO     | [data] copytool_out thread has finished
[2026-02-11 05:03:55] 2026-02-11 04:03:20,779 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-11 05:03:55] 2026-02-11 04:03:20,879 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-11 05:03:55] 2026-02-11 04:03:21,884 | INFO     | [job] queue monitor thread has finished
[2026-02-11 05:03:55] 2026-02-11 04:03:24,785 | INFO     | [data] queue_monitor thread has finished
[2026-02-11 05:03:55] 2026-02-11 04:03:47,762 | INFO     | PID=440980 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-11 05:03:55] 2026-02-11 04:03:47,762 | INFO     | .. there are 11 such processes running
[2026-02-11 05:03:55] 2026-02-11 04:03:47,763 | INFO     | found 0 job(s) in 20 queues
[2026-02-11 05:03:55] 2026-02-11 04:03:47,763 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-11 05:03:55] 2026-02-11 04:03:47,763 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-11 05:03:55] 2026-02-11 04:03:48,552 | INFO     | [monitor] cgroup control has ended
[2026-02-11 05:03:55] 2026-02-11 04:03:49,789 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23257829746496)>', '<ExcThread(monitor, started 23257586865920)>']
[2026-02-11 05:03:55] 2026-02-11 04:03:50,778 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-11 05:03:55] 2026-02-11 04:03:50,778 | INFO     | [monitor] control thread has ended
[2026-02-11 05:03:55] 2026-02-11 04:03:54,806 | INFO     | all workflow threads have been joined
[2026-02-11 05:03:55] 2026-02-11 04:03:54,806 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-11 05:03:55] 2026-02-11 04:03:54,806 | INFO     | traces error code: 0
[2026-02-11 05:03:55] 2026-02-11 04:03:54,806 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-11 05:03:55] 2026-02-11 04:03:54,919 [wrapper] ==== pilot stdout END ====
[2026-02-11 05:03:55] 2026-02-11 04:03:54,922 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-11 05:03:55] 2026-02-11 04:03:54,924 [wrapper] pilotpid: 440980
[2026-02-11 05:03:55] 2026-02-11 04:03:54,927 [wrapper] Pilot exit status: 0
[2026-02-11 05:03:55] 2026-02-11 04:03:54,937 [wrapper] pandaids: 7008106521
[2026-02-11 05:03:55] 2026-02-11 04:03:55,028 [wrapper] cleanup supervisor_pilot  688694 440981
[2026-02-11 05:03:55] 2026-02-11 04:03:55,031 [wrapper] Test setup, not cleaning
[2026-02-11 05:03:55] 2026-02-11 04:03:55,033 [wrapper] apfmon messages muted
[2026-02-11 05:03:55] 2026-02-11 04:03:55,036 [wrapper] ==== wrapper stdout END ====
[2026-02-11 05:03:55] 2026-02-11 04:03:55,039 [wrapper] ==== wrapper stderr END ====
[2026-02-11 05:03:55]  *** Error codes and diagnostics ***
[2026-02-11 05:03:55]     "exeErrorCode": 0,
[2026-02-11 05:03:55]     "exeErrorDiag": "",
[2026-02-11 05:03:55]     "pilotErrorCode": 0,
[2026-02-11 05:03:55]     "pilotErrorDiag": "",
[2026-02-11 05:03:55]  *** Listing of results directory ***
[2026-02-11 05:03:55] total 669924
[2026-02-11 05:03:55] -rw-r--r-- 1 boinc boinc      5111 Feb 10 22:52 queuedata.json
[2026-02-11 05:03:55] -rw-r--r-- 1 boinc boinc    584627 Feb 10 22:52 pilot3.tar.gz
[2026-02-11 05:03:55] -rwx------ 1 boinc boinc     36322 Feb 10 22:52 runpilot2-wrapper.sh
[2026-02-11 05:03:55] -rw-r--r-- 1 boinc boinc       100 Feb 11 03:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-11 05:03:55] -rwxr-xr-x 1 boinc boinc      7986 Feb 11 03:32 run_atlas
[2026-02-11 05:03:55] -rw-r--r-- 1 boinc boinc       105 Feb 11 03:32 job.xml
[2026-02-11 05:03:55] -rw-r--r-- 1 boinc boinc      6694 Feb 11 03:32 init_data.xml
[2026-02-11 05:03:55] -rw-r--r-- 2 boinc boinc 498120733 Feb 11 03:32 EVNT.48318032._000276.pool.root.1
[2026-02-11 05:03:55] -rw-r--r-- 2 boinc boinc     15845 Feb 11 03:32 start_atlas.sh
[2026-02-11 05:03:55] drwxrwx--x 2 boinc boinc      4096 Feb 11 03:32 shared
[2026-02-11 05:03:55] -rw-r--r-- 2 boinc boinc    597962 Feb 11 03:32 input.tar.gz
[2026-02-11 05:03:55] -rw-r--r-- 1 boinc boinc         0 Feb 11 03:32 boinc_lockfile
[2026-02-11 05:03:55] -rw-r--r-- 1 boinc boinc      2538 Feb 11 03:32 pandaJob.out
[2026-02-11 05:03:55] -rw------- 1 boinc boinc   1009649 Feb 11 03:32 agis_schedconf.cvmfs.json
[2026-02-11 05:03:55] -rw------- 1 boinc boinc   1512955 Feb 11 03:32 agis_ddmendpoints.agis.ALL.json
[2026-02-11 05:03:55] -rw------- 1 boinc boinc       440 Feb 11 03:32 workernode_map.json
[2026-02-11 05:03:55] drwx------ 5 boinc boinc      4096 Feb 11 03:32 pilot3
[2026-02-11 05:03:55] -rw-r--r-- 1 boinc boinc       530 Feb 11 05:02 boinc_task_state.xml
[2026-02-11 05:03:55] -rw------- 1 boinc boinc 181706287 Feb 11 05:02 HITS.48318034._015545.pool.root.1
[2026-02-11 05:03:55] -rw------- 1 boinc boinc      1023 Feb 11 05:03 memory_monitor_summary.json
[2026-02-11 05:03:55] -rw------- 1 boinc boinc    318711 Feb 11 05:03 log.48318034._015545.job.log.tgz.1
[2026-02-11 05:03:55] -rw------- 1 boinc boinc      6344 Feb 11 05:03 heartbeat.json
[2026-02-11 05:03:55] -rw------- 1 boinc boinc        95 Feb 11 05:03 pilot_heartbeat.json
[2026-02-11 05:03:55] -rw-r--r-- 1 boinc boinc        27 Feb 11 05:03 wrapper_checkpoint.txt
[2026-02-11 05:03:55] -rw-r--r-- 1 boinc boinc      8192 Feb 11 05:03 boinc_mmap_file
[2026-02-11 05:03:55] -rw------- 1 boinc boinc      4830 Feb 11 05:03 pilotlog.txt
[2026-02-11 05:03:55] -rw------- 1 boinc boinc    796632 Feb 11 05:03 log.48318034._015545.job.log.1
[2026-02-11 05:03:55] -rw------- 1 boinc boinc       357 Feb 11 05:03 output.list
[2026-02-11 05:03:55] -rw-r--r-- 1 boinc boinc       620 Feb 11 05:03 runtime_log
[2026-02-11 05:03:55] -rw------- 1 boinc boinc   1136640 Feb 11 05:03 result.tar.gz
[2026-02-11 05:03:55] -rw-r--r-- 1 boinc boinc      9204 Feb 11 05:03 runtime_log.err
[2026-02-11 05:03:55] -rw------- 1 boinc boinc       660 Feb 11 05:03 rYLLDmQqAA9n9Rq4apOajLDm4fhM0noT9bVooX4SDmo6hKDmL04aqm.diag
[2026-02-11 05:03:55] -rw-r--r-- 1 boinc boinc     21075 Feb 11 05:03 stderr.txt
[2026-02-11 05:03:55] HITS file was successfully produced:
[2026-02-11 05:03:55] -rw------- 1 boinc boinc 181706287 Feb 11 05:02 shared/HITS.pool.root.1
[2026-02-11 05:03:55]  *** Contents of shared directory: ***
[2026-02-11 05:03:55] total 665616
[2026-02-11 05:03:55] -rw-r--r-- 2 boinc boinc 498120733 Feb 11 03:32 ATLAS.root_0
[2026-02-11 05:03:55] -rw-r--r-- 2 boinc boinc     15845 Feb 11 03:32 start_atlas.sh
[2026-02-11 05:03:55] -rw-r--r-- 2 boinc boinc    597962 Feb 11 03:32 input.tar.gz
[2026-02-11 05:03:55] -rw------- 1 boinc boinc 181706287 Feb 11 05:02 HITS.pool.root.1
[2026-02-11 05:03:55] -rw------- 1 boinc boinc   1136640 Feb 11 05:03 result.tar.gz
05:03:56 (427761): run_atlas exited; CPU time 20830.406937
05:03:56 (427761): called boinc_finish(0)

</stderr_txt>
]]>

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