Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:14:33 (2256993): wrapper (7.7.26015): starting
23:14:33 (2256993): wrapper: running run_atlas (--nthreads 8)
[2026-02-10 23:14:33] Arguments: --nthreads 8
[2026-02-10 23:14:33] Threads: 8
[2026-02-10 23:14:33] Checking for CVMFS
[2026-02-10 23:14:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 23:14:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 23:14:33] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 23:14:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 23:14:33] 2.11.3.0 1348857 103860 212876 156108 2 16 44818653 45568000 16609 130560 0 598162503 99.809 333932748 19732 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-02-10 23:14:33] CVMFS is ok
[2026-02-10 23:14:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-10 23:14:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-10 23:14:33] Further information can be found at the LHC@home message board.
[2026-02-10 23:14:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 23:14:33] Checking for apptainer binary...
[2026-02-10 23:14:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 23:14:33] Running /usr/bin/apptainer --version
[2026-02-10 23:14:33] apptainer version 1.4.1-1.el9
[2026-02-10 23:14:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 23:14:33] wns0004.triumf.lcg
[2026-02-10 23:14:33] apptainer works
[2026-02-10 23:14:33] Set ATHENA_PROC_NUMBER=8
[2026-02-10 23:14:33] Set ATHENA_CORE_NUMBER=8
[2026-02-10 23:14:33] Starting ATLAS job with PandaID=7008399293
[2026-02-10 23:14:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-10 23:17:54]  *** The last 200 lines of the pilot log: ***
[2026-02-10 23:17:54] 2026-02-11 07:17:21,099 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-10 23:17:54] 2026-02-11 07:17:21,099 | INFO     | ..............................
[2026-02-10 23:17:54] 2026-02-11 07:17:21,099 | INFO     | . Timing measurements:
[2026-02-10 23:17:54] 2026-02-11 07:17:21,099 | INFO     | . get job = 0 s
[2026-02-10 23:17:54] 2026-02-11 07:17:21,099 | INFO     | . initial setup = 6 s
[2026-02-10 23:17:54] 2026-02-11 07:17:21,099 | INFO     | . payload setup = 4 s
[2026-02-10 23:17:54] 2026-02-11 07:17:21,100 | INFO     | . stage-in = 0 s
[2026-02-10 23:17:54] 2026-02-11 07:17:21,100 | INFO     | . payload execution = 17 s
[2026-02-10 23:17:54] 2026-02-11 07:17:21,100 | INFO     | . stage-out = 0 s
[2026-02-10 23:17:54] 2026-02-11 07:17:21,100 | INFO     | . log creation = 0 s
[2026-02-10 23:17:54] 2026-02-11 07:17:21,100 | INFO     | ..............................
[2026-02-10 23:17:54] 2026-02-11 07:17:21,100 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-10 23:17:54] 2026-02-11 07:17:21,100 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7008399293/pilotlog.txt
[2026-02-10 23:17:54] 2026-02-11 07:17:21,113 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-10 23:17:54] - Log from pilotlog.txt -
[2026-02-10 23:17:54] 2026-02-11 07:17:21,098 | INFO     | extracted standard memory fields from prmon json
[2026-02-10 23:17:54] 2026-02-11 07:17:21,098 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-10 23:17:54] 2026-02-11 07:17:21,098 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-10 23:17:54] 2026-02-11 07:17:21,098 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-10 23:17:54] 2026-02-11 07:17:21,098 | WARNING  | found no stored workdir sizes
[2026-02-10 23:17:54] 2026-02-11 07:17:21,098 | INFO     | will not add max space = 0 B to job metrics
[2026-02-10 23:17:54] 2026-02-11 07:17:21,099 | WARNING  | wrong length of table data, x=[1770794107.0], y=[778.0] (must be same and length>=4)
[2026-02-10 23:17:54] 2026-02-11 07:17:21,099 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-10 23:17:54] 2026-02-11 07:17:21,099 | INFO     | ..............................
[2026-02-10 23:17:54] 2026-02-11 07:17:21,099 | INFO     | . Timing measurements:
[2026-02-10 23:17:54] 2026-02-11 07:17:21,099 | INFO     | . get job = 0 s
[2026-02-10 23:17:54] 2026-02-11 07:17:21,099 | INFO     | . initial setup = 6 s
[2026-02-10 23:17:54] 2026-02-11 07:17:21,099 | INFO     | . payload setup = 4 s
[2026-02-10 23:17:54] 2026-02-11 07:17:21,100 | INFO     | . stage-in = 0 s
[2026-02-10 23:17:54] 2026-02-11 07:17:21,100 | INFO     | . payload execution = 17 s
[2026-02-10 23:17:54] 2026-02-11 07:17:21,100 | INFO     | . stage-out = 0 s
[2026-02-10 23:17:54] 2026-02-11 07:17:21,100 | INFO     | . log creation = 0 s
[2026-02-10 23:17:54] 2026-02-11 07:17:21,100 | INFO     | ..............................
[2026-02-10 23:17:54] 2026-02-11 07:17:21,100 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-10 23:17:54] 2026-02-11 07:17:21,100 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7008399293/pilotlog.txt
[2026-02-10 23:17:54] 2026-02-11 07:17:21,113 | WARNING  | 
[2026-02-10 23:17:54] [begin log extracts]
[2026-02-10 23:17:54] - Log from pilotlog.txt -
[2026-02-10 23:17:54] 2026-02-11 07:17:21,098 | INFO     | extracted standard memory fields from prmon json
[2026-02-10 23:17:54] 2026-02-11 07:17:21,098 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-10 23:17:54] 2026-02-11 07:17:21,098 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-10 23:17:54] 2026-02-11 07:17:21,098 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-10 23:17:54] 2026-02-11 07:17:21,098 | WARNING  | found no stored workdir sizes
[2026-02-10 23:17:54] 2026-02-11 07:17:21,098 | INFO     | will not add max space = 0 B to job metrics
[2026-02-10 23:17:54] 2026-02-11 07:17:21,099 | WARNING  | wrong length of table data, x=[1770794107.0], y=[778.0] (must be same and length>=4)
[2026-02-10 23:17:54] 2026-02-11 07:17:21,099 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-10 23:17:54] 2026-02-11 07:17:21,099 | INFO     | ..............................
[2026-02-10 23:17:54] 2026-02-11 07:17:21,099 | INFO     | . Timing measurements:
[2026-02-10 23:17:54] 2026-02-11 07:17:21,099 | INFO     | . get job = 0 s
[2026-02-10 23:17:54] 2026-02-11 07:17:21,099 | INFO     | . initial setup = 6 s
[2026-02-10 23:17:54] 2026-02-11 07:17:21,099 | INFO     | . payload setup = 4 s
[2026-02-10 23:17:54] 2026-02-11 07:17:21,100 | INFO     | . stage-in = 0 s
[2026-02-10 23:17:54] 2026-02-11 07:17:21,100 | INFO     | . payload execution = 17 s
[2026-02-10 23:17:54] 2026-02-11 07:17:21,100 | INFO     | . stage-out = 0 s
[2026-02-10 23:17:54] 2026-02-11 07:17:21,100 | INFO     | . log creation = 0 s
[2026-02-10 23:17:54] 2026-02-11 07:17:21,100 | INFO     | ..............................
[2026-02-10 23:17:54] 2026-02-11 07:17:21,100 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-10 23:17:54] 2026-02-11 07:17:21,100 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7008399293/pilotlog.txt
[2026-02-10 23:17:54] [end log extracts]
[2026-02-10 23:17:54] 2026-02-11 07:17:21,113 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-10 23:17:54] 2026-02-11 07:17:21,114 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-10 23:17:54] 2026-02-11 07:17:21,403 | INFO     | 
[2026-02-10 23:17:54] 2026-02-11 07:17:21,403 | INFO     | job summary report
[2026-02-10 23:17:54] 2026-02-11 07:17:21,403 | INFO     | --------------------------------------------------
[2026-02-10 23:17:54] 2026-02-11 07:17:21,403 | INFO     | PanDA job id: 7008399293
[2026-02-10 23:17:54] 2026-02-11 07:17:21,404 | INFO     | task id: 48442031
[2026-02-10 23:17:54] 2026-02-11 07:17:21,404 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-10 23:15:15,993 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-10 23:17:54] 2026-02-11 07:17:21,404 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-10 23:17:54] 2026-02-11 07:17:21,404 | INFO     | pilot state: failed 
[2026-02-10 23:17:54] 2026-02-11 07:17:21,404 | INFO     | transexitcode: 65
[2026-02-10 23:17:54] 2026-02-11 07:17:21,404 | INFO     | exeerrorcode: 65
[2026-02-10 23:17:54] 2026-02-11 07:17:21,404 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-10 23:17:54] 2026-02-11 07:17:21,404 | INFO     | exitcode: 65
[2026-02-10 23:17:54] 2026-02-11 07:17:21,404 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-10 23:17:54] 2026-02-11 07:17:21,404 | INFO     | cpuconsumptiontime: 15 s
[2026-02-10 23:17:54] 2026-02-11 07:17:21,404 | INFO     | nevents: 0
[2026-02-10 23:17:54] 2026-02-11 07:17:21,404 | INFO     | neventsw: 0
[2026-02-10 23:17:54] 2026-02-11 07:17:21,404 | INFO     | pid: 2265190
[2026-02-10 23:17:54] 2026-02-11 07:17:21,404 | INFO     | pgrp: 2265190
[2026-02-10 23:17:54] 2026-02-11 07:17:21,404 | INFO     | corecount: 8
[2026-02-10 23:17:54] 2026-02-11 07:17:21,405 | INFO     | event service: False
[2026-02-10 23:17:54] 2026-02-11 07:17:21,405 | INFO     | sizes: {0: 2281682, 1: 2282199, 11: 2282199, 26: 2309734, 27: 2309734, 144: 2309900}
[2026-02-10 23:17:54] 2026-02-11 07:17:21,405 | INFO     | --------------------------------------------------
[2026-02-10 23:17:54] 2026-02-11 07:17:21,405 | INFO     | 
[2026-02-10 23:17:54] 2026-02-11 07:17:21,405 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-10 23:17:54] 2026-02-11 07:17:21,421 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-10 23:17:54] 2026-02-11 07:17:21,421 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-10 23:17:54] 2026-02-11 07:17:21,421 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-10 23:17:54] 2026-02-11 07:17:21,421 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-10 23:17:54] 2026-02-11 07:17:21,421 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-10 23:17:54] 2026-02-11 07:17:21,421 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-10 23:17:54] 2026-02-11 07:17:21,421 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-10 23:17:54] 2026-02-11 07:17:21,422 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-10 23:17:54] 2026-02-11 07:17:21,422 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-10 23:17:54] 2026-02-11 07:17:21,422 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-10 23:17:54] 2026-02-11 07:17:21,422 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-10 23:17:54] 2026-02-11 07:17:21,422 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-10 23:17:54] 2026-02-11 07:17:21,422 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-10 23:17:54] 2026-02-11 07:17:21,422 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-10 23:17:54] 2026-02-11 07:17:21,422 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-10 23:17:54] 2026-02-11 07:17:21,422 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-10 23:17:54] 2026-02-11 07:17:21,422 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-10 23:17:54] 2026-02-11 07:17:21,422 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-10 23:17:54] 2026-02-11 07:17:21,422 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-10 23:17:54] 2026-02-11 07:17:21,422 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-10 23:17:54] 2026-02-11 07:17:21,423 | INFO     | job 7008399293 has completed (purged errors)
[2026-02-10 23:17:54] 2026-02-11 07:17:21,423 | INFO     | overall cleanup function is called
[2026-02-10 23:17:54] 2026-02-11 07:17:22,150 | INFO     | PID=2260670 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-10 23:17:54] 2026-02-11 07:17:22,151 | INFO     | .. there are 26 such processes running
[2026-02-10 23:17:54] 2026-02-11 07:17:22,429 | INFO     | --- collectZombieJob: --- 10, [2265190]
[2026-02-10 23:17:54] 2026-02-11 07:17:22,429 | INFO     | zombie collector waiting for pid 2265190
[2026-02-10 23:17:54] 2026-02-11 07:17:22,429 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-10 23:17:54] 2026-02-11 07:17:22,429 | INFO     | collected zombie processes
[2026-02-10 23:17:54] 2026-02-11 07:17:22,429 | INFO     | will attempt to kill all subprocesses of pid=2265190
[2026-02-10 23:17:54] 2026-02-11 07:17:22,614 | INFO     | process IDs to be killed: [2265190] (in reverse order)
[2026-02-10 23:17:54] 2026-02-11 07:17:22,673 | WARNING  | found no corresponding commands to process id(s)
[2026-02-10 23:17:54] 2026-02-11 07:17:22,673 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-10 23:17:54] 2026-02-11 07:17:22,679 | INFO     | did not find any defunct processes belonging to 2265190
[2026-02-10 23:17:54] 2026-02-11 07:17:22,686 | INFO     | did not find any defunct processes belonging to 2265190
[2026-02-10 23:17:54] 2026-02-11 07:17:22,686 | INFO     | ready for new job
[2026-02-10 23:17:54] 2026-02-11 07:17:22,686 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-10 23:17:54] 2026-02-11 07:17:22,687 | INFO     | **************************************
[2026-02-10 23:17:54] 2026-02-11 07:17:22,687 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-10 23:17:54] 2026-02-11 07:17:22,687 | INFO     | **************************************
[2026-02-10 23:17:54] 2026-02-11 07:17:22,687 | INFO     | 
[2026-02-10 23:17:54] 2026-02-11 07:17:22,689 | INFO     | architecture information:
[2026-02-10 23:17:54] 2026-02-11 07:17:22,689 | INFO     | executing command: cat /etc/os-release
[2026-02-10 23:17:54] 2026-02-11 07:17:22,700 | INFO     | cat /etc/os-release:
[2026-02-10 23:17:54] NAME="CentOS Linux"
[2026-02-10 23:17:54] VERSION="7 (Core)"
[2026-02-10 23:17:54] ID="centos"
[2026-02-10 23:17:54] ID_LIKE="rhel fedora"
[2026-02-10 23:17:54] VERSION_ID="7"
[2026-02-10 23:17:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-10 23:17:54] ANSI_COLOR="0;31"
[2026-02-10 23:17:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-10 23:17:54] HOME_URL="https://www.centos.org/"
[2026-02-10 23:17:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-10 23:17:54] 
[2026-02-10 23:17:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-10 23:17:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-10 23:17:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-10 23:17:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-10 23:17:54] 
[2026-02-10 23:17:54] 2026-02-11 07:17:22,700 | INFO     | **************************************
[2026-02-10 23:17:54] 2026-02-11 07:17:23,203 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-10 23:17:54] 2026-02-11 07:17:23,217 | INFO     | sufficient remaining disk space (1245697802240 B)
[2026-02-10 23:17:54] 2026-02-11 07:17:23,217 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-10 23:17:54] 2026-02-11 07:17:23,218 | INFO     | current server update state: UPDATING_FINAL
[2026-02-10 23:17:54] 2026-02-11 07:17:23,218 | INFO     | update_server=False
[2026-02-10 23:17:54] 2026-02-11 07:17:23,218 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-10 23:17:54] 2026-02-11 07:17:23,218 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-10 23:17:54] 2026-02-11 07:17:23,259 | INFO     | all job control threads have been joined
[2026-02-10 23:17:54] 2026-02-11 07:17:23,689 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-10 23:17:54] 2026-02-11 07:17:23,689 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-10 23:17:54] 2026-02-11 07:17:23,689 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-10 23:17:54] 2026-02-11 07:17:23,689 | INFO     | will abort loop
[2026-02-10 23:17:54] 2026-02-11 07:17:24,127 | INFO     | all data control threads have been joined
[2026-02-10 23:17:54] 2026-02-11 07:17:24,223 | INFO     | [job] retrieve thread has finished
[2026-02-10 23:17:54] 2026-02-11 07:17:24,227 | INFO     | all payload control threads have been joined
[2026-02-10 23:17:54] 2026-02-11 07:17:24,259 | INFO     | [job] control thread has finished
[2026-02-10 23:17:54] 2026-02-11 07:17:24,343 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-10 23:17:54] 2026-02-11 07:17:24,348 | INFO     | [payload] validate_pre thread has finished
[2026-02-10 23:17:54] 2026-02-11 07:17:24,351 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-10 23:17:54] 2026-02-11 07:17:24,509 | INFO     | [data] copytool_in thread has finished
[2026-02-10 23:17:54] 2026-02-11 07:17:24,688 | INFO     | [payload] failed_post thread has finished
[2026-02-10 23:17:54] 2026-02-11 07:17:24,694 | INFO     | [job] job monitor thread has finished
[2026-02-10 23:17:54] 2026-02-11 07:17:25,139 | INFO     | [data] control thread has finished
[2026-02-10 23:17:54] 2026-02-11 07:17:25,232 | INFO     | [payload] control thread has finished
[2026-02-10 23:17:54] 2026-02-11 07:17:25,483 | INFO     | [job] validate thread has finished
[2026-02-10 23:17:54] 2026-02-11 07:17:25,699 | INFO     | [payload] validate_post thread has finished
[2026-02-10 23:17:54] 2026-02-11 07:17:25,700 | INFO     | [job] create_data_payload thread has finished
[2026-02-10 23:17:54] 2026-02-11 07:17:25,711 | INFO     | [payload] execute_payloads thread has finished
[2026-02-10 23:17:54] 2026-02-11 07:17:26,197 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-10 23:17:54] 2026-02-11 07:17:26,356 | INFO     | [data] copytool_out thread has finished
[2026-02-10 23:17:54] 2026-02-11 07:17:27,202 | INFO     | [job] queue monitor thread has finished
[2026-02-10 23:17:54] 2026-02-11 07:17:27,223 | INFO     | [data] queue_monitor thread has finished
[2026-02-10 23:17:54] 2026-02-11 07:17:46,231 | INFO     | [monitor] cgroup control has ended
[2026-02-10 23:17:54] 2026-02-11 07:17:47,665 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140365716105024)>', '<ExcThread(monitor, started 140364950263552)>']
[2026-02-10 23:17:54] 2026-02-11 07:17:52,692 | INFO     | all workflow threads have been joined
[2026-02-10 23:17:54] 2026-02-11 07:17:52,692 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-10 23:17:54] 2026-02-11 07:17:52,692 | INFO     | traces error code: 0
[2026-02-10 23:17:54] 2026-02-11 07:17:52,693 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-10 23:17:54] 2026-02-11 07:17:54,420 | INFO     | PID=2260670 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-10 23:17:54] 2026-02-11 07:17:54,421 | INFO     | .. there are 26 such processes running
[2026-02-10 23:17:54] 2026-02-11 07:17:54,422 | INFO     | found 0 job(s) in 20 queues
[2026-02-10 23:17:54] 2026-02-11 07:17:54,422 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-10 23:17:54] 2026-02-11 07:17:54,422 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-10 23:17:54] 2026-02-11 07:17:54,422 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-10 23:17:54] 2026-02-11 07:17:54,422 | INFO     | [monitor] control thread has ended
[2026-02-10 23:17:54] 2026-02-11 07:17:54,546 [wrapper] ==== pilot stdout END ====
[2026-02-10 23:17:54] 2026-02-11 07:17:54,549 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-10 23:17:54] 2026-02-11 07:17:54,551 [wrapper] pilotpid: 2260670
[2026-02-10 23:17:54] 2026-02-11 07:17:54,553 [wrapper] Pilot exit status: 0
[2026-02-10 23:17:54] 2026-02-11 07:17:54,561 [wrapper] pandaids: 7008399293
[2026-02-10 23:17:54] 2026-02-11 07:17:54,597 [wrapper] cleanup supervisor_pilot 2260676 2260671
[2026-02-10 23:17:54] 2026-02-11 07:17:54,599 [wrapper] Test setup, not cleaning
[2026-02-10 23:17:54] 2026-02-11 07:17:54,601 [wrapper] apfmon messages muted
[2026-02-10 23:17:54] 2026-02-11 07:17:54,603 [wrapper] ==== wrapper stdout END ====
[2026-02-10 23:17:54] 2026-02-11 07:17:54,605 [wrapper] ==== wrapper stderr END ====
[2026-02-10 23:17:54]  *** Error codes and diagnostics ***
[2026-02-10 23:17:54]     "exeErrorCode": 65,
[2026-02-10 23:17:54]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-10 23:17:54]     "pilotErrorCode": 1305,
[2026-02-10 23:17:54]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-10 23:17:54]  *** Listing of results directory ***
[2026-02-10 23:17:54] total 491612
[2026-02-10 23:17:54] -rw-r--r--. 1 boinc boinc    584627 Feb 10 17:48 pilot3.tar.gz
[2026-02-10 23:17:54] -rwx------. 1 boinc boinc     36322 Feb 10 17:52 runpilot2-wrapper.sh
[2026-02-10 23:17:54] -rw-r--r--. 1 boinc boinc      5111 Feb 10 17:55 queuedata.json
[2026-02-10 23:17:54] -rw-r--r--. 1 boinc boinc       100 Feb 10 23:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-10 23:17:54] -rwxr-xr-x. 1 boinc boinc      7986 Feb 10 23:14 run_atlas
[2026-02-10 23:17:54] -rw-r--r--. 1 boinc boinc       105 Feb 10 23:14 job.xml
[2026-02-10 23:17:54] -rw-r--r--. 1 boinc boinc      6443 Feb 10 23:14 init_data.xml
[2026-02-10 23:17:54] -rw-r--r--. 2 boinc boinc 499269886 Feb 10 23:14 EVNT.48442027._000163.pool.root.1
[2026-02-10 23:17:54] -rw-r--r--. 2 boinc boinc     15845 Feb 10 23:14 start_atlas.sh
[2026-02-10 23:17:54] drwxrwx--x. 2 boinc boinc      4096 Feb 10 23:14 shared
[2026-02-10 23:17:54] -rw-r--r--. 2 boinc boinc    597955 Feb 10 23:14 input.tar.gz
[2026-02-10 23:17:54] -rw-r--r--. 1 boinc boinc         0 Feb 10 23:14 boinc_lockfile
[2026-02-10 23:17:54] -rw-r--r--. 1 boinc boinc      2529 Feb 10 23:14 pandaJob.out
[2026-02-10 23:17:54] -rw-------. 1 boinc boinc   1009633 Feb 10 23:14 agis_schedconf.cvmfs.json
[2026-02-10 23:17:54] -rw-------. 1 boinc boinc   1512955 Feb 10 23:14 agis_ddmendpoints.agis.ALL.json
[2026-02-10 23:17:54] -rw-------. 1 boinc boinc       435 Feb 10 23:14 workernode_map.json
[2026-02-10 23:17:54] drwx------. 5 boinc boinc      4096 Feb 10 23:14 pilot3
[2026-02-10 23:17:54] -rw-r--r--. 1 boinc boinc       522 Feb 10 23:15 boinc_task_state.xml
[2026-02-10 23:17:54] -rw-------. 1 boinc boinc       984 Feb 10 23:15 memory_monitor_summary.json
[2026-02-10 23:17:54] -rw-------. 1 boinc boinc     21034 Feb 10 23:15 log.48442031._009459.job.log.tgz.1
[2026-02-10 23:17:54] -rw-------. 1 boinc boinc      7032 Feb 10 23:17 heartbeat.json
[2026-02-10 23:17:54] -rw-r--r--. 1 boinc boinc      8192 Feb 10 23:17 boinc_mmap_file
[2026-02-10 23:17:54] -rw-r--r--. 1 boinc boinc        22 Feb 10 23:17 wrapper_checkpoint.txt
[2026-02-10 23:17:54] -rw-------. 1 boinc boinc        95 Feb 10 23:17 pilot_heartbeat.json
[2026-02-10 23:17:54] -rw-------. 1 boinc boinc       823 Feb 10 23:17 pilotlog.txt
[2026-02-10 23:17:54] -rw-------. 1 boinc boinc     80053 Feb 10 23:17 log.48442031._009459.job.log.1
[2026-02-10 23:17:54] -rw-------. 1 boinc boinc       188 Feb 10 23:17 output.list
[2026-02-10 23:17:54] -rw-r--r--. 1 boinc boinc       620 Feb 10 23:17 runtime_log
[2026-02-10 23:17:54] -rw-------. 1 boinc boinc    122880 Feb 10 23:17 result.tar.gz
[2026-02-10 23:17:54] -rw-r--r--. 1 boinc boinc      8633 Feb 10 23:17 runtime_log.err
[2026-02-10 23:17:54] -rw-------. 1 boinc boinc       646 Feb 10 23:17 jhCODmuZEA9n9Rq4apOajLDm4fhM0noT9bVooX4SDmldiKDmzm8ncn.diag
[2026-02-10 23:17:54] -rw-r--r--. 1 boinc boinc     21725 Feb 10 23:17 stderr.txt
[2026-02-10 23:17:54] No HITS result produced
[2026-02-10 23:17:54]  *** Contents of shared directory: ***
[2026-02-10 23:17:54] total 488296
[2026-02-10 23:17:54] -rw-r--r--. 2 boinc boinc 499269886 Feb 10 23:14 ATLAS.root_0
[2026-02-10 23:17:54] -rw-r--r--. 2 boinc boinc     15845 Feb 10 23:14 start_atlas.sh
[2026-02-10 23:17:54] -rw-r--r--. 2 boinc boinc    597955 Feb 10 23:14 input.tar.gz
[2026-02-10 23:17:54] -rw-------. 1 boinc boinc    122880 Feb 10 23:17 result.tar.gz
23:17:56 (2256993): run_atlas exited; CPU time 18.722742
23:17:56 (2256993): called boinc_finish(0)

</stderr_txt>
]]>

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