Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-11 15:22:24 (34212): vboxwrapper version 26210
2026-02-11 15:22:24 (34212): BOINC client version: 8.2.8
2026-02-11 15:22:25 (34212): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-02-11 15:22:25 (34212): Successfully copied 'init_data.xml' to the shared directory.
2026-02-11 15:22:25 (34212): Create VM. (boinc_49cfb861a67fe986, slot#13)
2026-02-11 15:22:26 (34212): Setting Memory Size for VM. (4096MB)
2026-02-11 15:22:26 (34212): Setting CPU Count for VM. (1)
2026-02-11 15:22:26 (34212): Setting Chipset Options for VM.
2026-02-11 15:22:27 (34212): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-11 15:22:27 (34212): Setting Boot Options for VM.
2026-02-11 15:22:27 (34212): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-11 15:22:28 (34212): Enabling VM Network Access.
2026-02-11 15:22:28 (34212): Disabling USB Support for VM.
2026-02-11 15:22:28 (34212): Disabling COM Port Support for VM.
2026-02-11 15:22:28 (34212): Disabling LPT Port Support for VM.
2026-02-11 15:22:29 (34212): Disabling Audio Support for VM.
2026-02-11 15:22:29 (34212): Disabling Clipboard Support for VM.
2026-02-11 15:22:29 (34212): Disabling Drag and Drop Support for VM.
2026-02-11 15:22:29 (34212): Adding storage controller(s) to VM.
2026-02-11 15:22:30 (34212): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-11 15:22:30 (34212): Adding VirtualBox Guest Additions to VM.
2026-02-11 15:22:30 (34212): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-11 15:22:31 (34212): forwarding host port 60669 to guest port 80
2026-02-11 15:22:31 (34212): Enabling remote desktop for VM.
2026-02-11 15:22:31 (34212): Required extension pack not installed, remote desktop not enabled.
2026-02-11 15:22:31 (34212): Enabling shared directory for VM.
2026-02-11 15:22:32 (34212): Starting VM using VBoxManage interface. (boinc_49cfb861a67fe986, slot#13)
2026-02-11 15:22:36 (34212): Successfully started VM. (PID = '30380')
2026-02-11 15:22:36 (34212): Reporting VM Process ID to BOINC.
2026-02-11 15:22:36 (34212): Guest Log: BIOS: VirtualBox 7.2.6
2026-02-11 15:22:36 (34212): Guest Log: CPUID EDX: 0x178bfbff
2026-02-11 15:22:36 (34212): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-11 15:22:36 (34212): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-11 15:22:36 (34212): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-11 15:22:36 (34212): Detected: Web Application Enabled (http://localhost:60669)
2026-02-11 15:22:36 (34212): Preference change detected
2026-02-11 15:22:36 (34212): Setting CPU throttle for VM. (100%)
2026-02-11 15:22:36 (34212): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-11 15:22:38 (34212): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-11 15:22:38 (34212): Guest Log: BIOS: Booting from Hard Disk...
2026-02-11 15:22:40 (34212): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-11 15:22:40 (34212): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-11 15:22:40 (34212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-11 15:22:43 (34212): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-11 15:22:43 (34212): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-11 15:22:48 (34212): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-11 15:22:48 (34212): Guest Log: 00:00:00.000089 main     Log opened 2026-02-11T15:22:46.113176000Z
2026-02-11 15:22:48 (34212): Guest Log: 00:00:00.000173 main     OS Product: Linux
2026-02-11 15:22:48 (34212): Guest Log: 00:00:00.000186 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-11 15:22:48 (34212): Guest Log: 00:00:00.000194 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-11 15:22:48 (34212): Guest Log: 00:00:00.000202 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-11 15:22:48 (34212): Guest Log: 00:00:00.000202 main     Process ID: 1241
2026-02-11 15:22:48 (34212): Guest Log: 00:00:00.000203 main     Package type: LINUX_64BITS_GENERIC
2026-02-11 15:22:48 (34212): Guest Log: 00:00:00.000698 main     5.2.32 r132073 started. Verbose level = 0
2026-02-11 15:22:48 (34212): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-11 15:22:48 (34212): Guest Log: [INFO] Mounting shared directory
2026-02-11 15:22:48 (34212): Guest Log: [INFO] Checking for init_data.xml
2026-02-11 15:22:49 (34212): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-11 15:22:49 (34212): Guest Log: [INFO] Detected branch: prod
2026-02-11 15:22:49 (34212): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-11 15:22:49 (34212): Guest Log: Copying input files
2026-02-11 15:22:52 (34212): Guest Log: Copied input files into RunAtlas.
2026-02-11 15:22:52 (34212): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2026-02-11 15:22:58 (34212): Guest Log: 00:00:10.013158 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 721 498 000ns (GuestNow=1 770 819 777 403 346 000 ns GuestLast=1 770 823 366 124 844 000 ns fSetTimeLastLoop=true )
2026-02-11 15:22:58 (34212): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-11 15:22:58 (34212): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-11 15:22:58 (34212): Guest Log: 2.6.3.0 1511 0 31556 156118 3 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2026-02-11 15:22:58 (34212): Guest Log: copied the webapp to /var/www
2026-02-11 15:22:58 (34212): Guest Log: core_number=1
2026-02-11 15:22:59 (34212): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-11 15:22:59 (34212): Guest Log:  *** Starting ATLAS job. (PandaID=7011163045 taskID=48431096) ***
2026-02-11 17:02:39 (34212): Status Report: Elapsed Time: '6000.000000'
2026-02-11 17:02:39 (34212): Status Report: CPU Time: '5934.937500'
2026-02-11 18:42:42 (34212): Status Report: Elapsed Time: '12000.000000'
2026-02-11 18:42:42 (34212): Status Report: CPU Time: '11899.640625'
2026-02-11 20:22:45 (34212): Status Report: Elapsed Time: '18000.000000'
2026-02-11 20:22:45 (34212): Status Report: CPU Time: '17861.703125'
2026-02-11 22:02:48 (34212): Status Report: Elapsed Time: '24000.000000'
2026-02-11 22:02:48 (34212): Status Report: CPU Time: '23819.156250'
2026-02-11 23:42:51 (34212): Status Report: Elapsed Time: '30000.000000'
2026-02-11 23:42:51 (34212): Status Report: CPU Time: '29778.218750'
2026-02-12 00:38:02 (34212): Guest Log:  *** Job finished ***
2026-02-12 00:38:02 (34212): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-12 00:38:02 (34212): Guest Log: 2026-02-11 23:37:44,346 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-12 00:38:02 (34212): Guest Log: 2026-02-11 23:37:44,346 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-12 00:38:02 (34212): Guest Log: 2026-02-11 23:37:44,395 | INFO     | [monitor] cgroup control has ended
2026-02-12 00:38:02 (34212): Guest Log: 2026-02-11 23:37:44,592 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139879910553408)>', '<ExcThread(monitor, started 139879459563264)>']
2026-02-12 00:38:02 (34212): Guest Log: 2026-02-11 23:37:45,348 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-12 00:38:02 (34212): Guest Log: 2026-02-11 23:37:45,348 | INFO     | [monitor] control thread has ended
2026-02-12 00:38:02 (34212): Guest Log: 2026-02-11 23:37:49,598 | INFO     | all workflow threads have been joined
2026-02-12 00:38:02 (34212): Guest Log: 2026-02-11 23:37:49,598 | INFO     | end of generic workflow (traces error code: 0)
2026-02-12 00:38:02 (34212): Guest Log: 2026-02-11 23:37:49,598 | INFO     | traces error code: 0
2026-02-12 00:38:02 (34212): Guest Log: 2026-02-11 23:37:49,598 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-12 00:38:02 (34212): Guest Log: 2026-02-11 23:37:49,718 [wrapper] ==== pilot stdout END ====
2026-02-12 00:38:02 (34212): Guest Log: 2026-02-11 23:37:49,720 [wrapper] ==== wrapper stdout RESUME ====
2026-02-12 00:38:02 (34212): Guest Log: 2026-02-11 23:37:49,721 [wrapper] pilotpid: 5854
2026-02-12 00:38:02 (34212): Guest Log: 2026-02-11 23:37:49,722 [wrapper] Pilot exit status: 0
2026-02-12 00:38:02 (34212): Guest Log: 2026-02-11 23:37:49,735 [wrapper] pandaids: 7011163045
2026-02-12 00:38:02 (34212): Guest Log: 2026-02-11 23:37:49,743 [wrapper] cleanup supervisor_pilot   819 5855
2026-02-12 00:38:02 (34212): Guest Log: 2026-02-11 23:37:49,745 [wrapper] Test setup, not cleaning
2026-02-12 00:38:02 (34212): Guest Log: 2026-02-11 23:37:49,746 [wrapper] apfmon messages muted
2026-02-12 00:38:02 (34212): Guest Log: 2026-02-11 23:37:49,748 [wrapper] ==== wrapper stdout END ====
2026-02-12 00:38:02 (34212): Guest Log: 2026-02-11 23:37:49,750 [wrapper] ==== wrapper stderr END ====
2026-02-12 00:38:02 (34212): Guest Log:  *** Error codes and diagnostics ***
2026-02-12 00:38:02 (34212): Guest Log:     "exeErrorCode": 0,
2026-02-12 00:38:02 (34212): Guest Log:     "exeErrorDiag": "",
2026-02-12 00:38:02 (34212): Guest Log:     "pilotErrorCode": 0,
2026-02-12 00:38:02 (34212): Guest Log:     "pilotErrorDiag": "",
2026-02-12 00:38:02 (34212): Guest Log:  *** Listing of results directory ***
2026-02-12 00:38:02 (34212): Guest Log: total 287380
2026-02-12 00:38:02 (34212): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb 10 21:52 queuedata.json
2026-02-12 00:38:02 (34212): Guest Log: -rwx------. 1 atlas atlas     36322 Feb 10 21:52 runpilot2-wrapper.sh
2026-02-12 00:38:02 (34212): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb 10 21:52 pilot3.tar.gz
2026-02-12 00:38:02 (34212): Guest Log: -rwxr-xr-x. 1 atlas atlas      9356 Feb 11 14:22 init_data.xml
2026-02-12 00:38:02 (34212): Guest Log: -rwxr-xr-x. 1 atlas atlas    597950 Feb 11 14:22 input.tar.gz
2026-02-12 00:38:02 (34212): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb 11 14:22 start_atlas.sh
2026-02-12 00:38:02 (34212): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 11 14:22 EVNT.48431094._000541.pool.root.1 -> /data/./ATLAS.root_0
2026-02-12 00:38:02 (34212): Guest Log: -rw-r--r--. 1 atlas atlas      2555 Feb 11 14:22 pandaJob.out
2026-02-12 00:38:02 (34212): Guest Log: -rw-------. 1 atlas atlas        50 Feb 11 14:22 setup.sh.local
2026-02-12 00:38:02 (34212): Guest Log: -rw-------. 1 atlas atlas   1008965 Feb 11 14:23 agis_schedconf.cvmfs.json
2026-02-12 00:38:02 (34212): Guest Log: -rw-------. 1 atlas atlas       424 Feb 11 14:23 workernode_map.json
2026-02-12 00:38:02 (34212): Guest Log: drwx------. 5 atlas atlas      4096 Feb 11 14:23 pilot3
2026-02-12 00:38:02 (34212): Guest Log: -rw-------. 1 atlas atlas 279868022 Feb 11 23:36 HITS.48431096._025206.pool.root.1
2026-02-12 00:38:02 (34212): Guest Log: -rw-------. 1 atlas atlas        95 Feb 11 23:37 pilot_heartbeat.json
2026-02-12 00:38:02 (34212): Guest Log: -rw-------. 1 atlas atlas      1023 Feb 11 23:37 memory_monitor_summary.json
2026-02-12 00:38:02 (34212): Guest Log: -rw-------. 1 atlas atlas   1512955 Feb 11 23:37 agis_ddmendpoints.agis.ALL.json
2026-02-12 00:38:02 (34212): Guest Log: -rw-------. 1 atlas atlas    624654 Feb 11 23:37 log.48431096._025206.job.log.tgz.1
2026-02-12 00:38:02 (34212): Guest Log: -rw-------. 1 atlas atlas      6356 Feb 11 23:37 heartbeat.json
2026-02-12 00:38:02 (34212): Guest Log: -rw-------. 1 atlas atlas      4801 Feb 11 23:37 pilotlog.txt
2026-02-12 00:38:02 (34212): Guest Log: -rw-------. 1 atlas atlas   4641632 Feb 11 23:37 log.48431096._025206.job.log.1
2026-02-12 00:38:02 (34212): Guest Log: -rw-------. 1 atlas atlas       357 Feb 11 23:37 output.list
2026-02-12 00:38:02 (34212): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 11 23:37 runtime_log
2026-02-12 00:38:02 (34212): Guest Log: -rw-------. 1 atlas atlas   5283840 Feb 11 23:37 result.tar.gz
2026-02-12 00:38:02 (34212): Guest Log: -rw-r--r--. 1 atlas atlas      9114 Feb 11 23:37 runtime_log.err
2026-02-12 00:38:02 (34212): Guest Log: -rw-------. 1 atlas atlas       656 Feb 11 23:37 b0vKDm4pAA9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmBriKDmxPQsAn.diag
2026-02-12 00:38:02 (34212): Guest Log: Looking for outputfile HITS.48431096._025206.pool.root.1
2026-02-12 00:38:02 (34212): Guest Log: HITS file was successfully produced
2026-02-12 00:38:02 (34212): Guest Log: -rw-------. 1 atlas atlas 279868022 Feb 11 23:36 /home/atlas/RunAtlas/HITS.48431096._025206.pool.root.1
2026-02-12 00:38:03 (34212): Guest Log: Successfully finished the ATLAS job!
2026-02-12 00:38:03 (34212): Guest Log: Copying the results back to the shared directory!
2026-02-12 00:38:03 (34212): Guest Log:  *** Contents of shared directory: ***
2026-02-12 00:38:03 (34212): Guest Log: total 939092
2026-02-12 00:38:03 (34212): Guest Log: -rwxrwxrwx. 1 root root 675845958 Feb 11 14:22 ATLAS.root_0
2026-02-12 00:38:03 (34212): Guest Log: -rwxrwxrwx. 1 root root 279868022 Feb 11  2026 HITS.pool.root.1
2026-02-12 00:38:03 (34212): Guest Log: -rwxrwxrwx. 1 root root      9356 Feb 11 14:22 init_data.xml
2026-02-12 00:38:03 (34212): Guest Log: -rwxrwxrwx. 1 root root    597950 Feb 11 02:00 input.tar.gz
2026-02-12 00:38:03 (34212): Guest Log: -rwxrwxrwx. 1 root root   5283840 Feb 11  2026 result.tar.gz
2026-02-12 00:38:03 (34212): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb 11 02:00 start_atlas.sh
2026-02-12 00:38:03 (34212): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-12 00:38:03 (34212): VM Completion File Detected.
2026-02-12 00:38:03 (34212): Powering off VM.
2026-02-12 00:38:03 (34212): Successfully stopped VM.
2026-02-12 00:38:03 (34212): Deregistering VM. (boinc_49cfb861a67fe986, slot#13)
2026-02-12 00:38:03 (34212): Removing network bandwidth throttle group from VM.
2026-02-12 00:38:04 (34212): Removing VM from VirtualBox.
2026-02-12 00:38:09 (34212): called boinc_finish(0)

</stderr_txt>
]]>

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