Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:18:25 (19523): wrapper (7.7.26015): starting
20:18:25 (19523): wrapper: running run_atlas (--nthreads 12)
[2026-02-10 20:18:25] Arguments: --nthreads 12
[2026-02-10 20:18:25] Threads: 12
[2026-02-10 20:18:25] Checking for CVMFS
[2026-02-10 20:18:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 20:18:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 20:18:25] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 20:18:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 20:18:25] 2.11.2.0 2913 397892 98068 156097 1 50 16562388 20275201 1 130560 1 171772723 99.946 24304573 16822 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-10 20:18:25] CVMFS is ok
[2026-02-10 20:18:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-10 20:18:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-10 20:18:25] Further information can be found at the LHC@home message board.
[2026-02-10 20:18:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 20:18:25] Checking for apptainer binary...
[2026-02-10 20:18:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 20:18:25] Running /usr/bin/apptainer --version
[2026-02-10 20:18:25] apptainer version 1.3.2-1.el7
[2026-02-10 20:18:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 20:18:27] c-205-6.aglt2.org
[2026-02-10 20:18:27] apptainer works
[2026-02-10 20:18:27] Set ATHENA_PROC_NUMBER=12
[2026-02-10 20:18:27] Set ATHENA_CORE_NUMBER=12
[2026-02-10 20:18:27] Starting ATLAS job with PandaID=7008106111
[2026-02-10 20:18:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-10 21:33:01]  *** The last 200 lines of the pilot log: ***
[2026-02-10 21:33:01]  filetype=log
[2026-02-10 21:33:01]  guid=cee611af-6762-4ec1-9652-5dd689580940
[2026-02-10 21:33:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-10 21:33:01]  is_altstaged=None
[2026-02-10 21:33:01]  is_tar=False
[2026-02-10 21:33:01]  lfn=log.48318034._015263.job.log.tgz.1
[2026-02-10 21:33:01]  mtime=0
[2026-02-10 21:33:01]  protocol_id=None
[2026-02-10 21:33:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-10 21:33:01]  replicas=None
[2026-02-10 21:33:01]  scope=mc23_13p6TeV
[2026-02-10 21:33:01]  status=None
[2026-02-10 21:33:01]  status_code=0
[2026-02-10 21:33:01]  storage_token=
[2026-02-10 21:33:01]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7008106111/log.48318034._015263.job.log.tgz.1
[2026-02-10 21:33:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/6d/log.48318034._015263.job.log.tgz.1
[2026-02-10 21:33:01]  workdir=None
[2026-02-10 21:33:01] ]
[2026-02-10 21:33:01] 2026-02-11 02:31:53,916 | INFO     | transferring file log.48318034._015263.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7008106111/log.48318034._015263.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-10 21:33:01] 2026-02-11 02:31:53,916 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7008106111/log.48318034._015263.job.log.tgz.1 /tmp/boinchome/slots/0/log.48318034._015263.job
[2026-02-10 21:33:01] 2026-02-11 02:31:53,936 | INFO     | adding to output.list: log.48318034._015263.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/6d/log.48318034._015263.job.log.tg
[2026-02-10 21:33:01] 2026-02-11 02:31:53,937 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-10 21:33:01] 2026-02-11 02:31:53,937 | INFO     | summary of transferred files:
[2026-02-10 21:33:01] 2026-02-11 02:31:53,938 | INFO     |  -- lfn=log.48318034._015263.job.log.tgz.1, status_code=0, status=transferred
[2026-02-10 21:33:01] 2026-02-11 02:31:53,938 | INFO     | stage-out finished correctly
[2026-02-10 21:33:01] 2026-02-11 02:31:54,022 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-10 21:33:01] 2026-02-11 02:31:54,103 | INFO     | job 7008106111 has state=finished
[2026-02-10 21:33:01] 2026-02-11 02:31:54,104 | INFO     | preparing for final server update for job 7008106111 in state='finished'
[2026-02-10 21:33:01] 2026-02-11 02:31:54,104 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7008106111/jobReport.json
[2026-02-10 21:33:01] 2026-02-11 02:31:54,107 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-10 21:33:01] 2026-02-11 02:31:54,107 | INFO     | this job has now completed (state=finished)
[2026-02-10 21:33:01] 2026-02-11 02:31:54,108 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-10 21:33:01] 2026-02-11 02:31:54,108 | INFO     | log transfer has been attempted: DONE
[2026-02-10 21:33:01] 2026-02-11 02:31:54,108 | INFO     | job 7008106111 has finished - writing final server update
[2026-02-10 21:33:01] 2026-02-11 02:31:54,109 | INFO     | total number of processed events: 400 (read)
[2026-02-10 21:33:01] 2026-02-11 02:31:54,111 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7008106111/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 21:33:01] 2026-02-11 02:31:54,112 | INFO     | extracted standard info from prmon json
[2026-02-10 21:33:01] 2026-02-11 02:31:54,112 | INFO     | extracted standard memory fields from prmon json
[2026-02-10 21:33:01] 2026-02-11 02:31:54,112 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-10 21:33:01] 2026-02-11 02:31:54,112 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-10 21:33:01] 2026-02-11 02:31:54,112 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-10 21:33:01] 2026-02-11 02:31:54,114 | INFO     | fitting pss+swap vs Time
[2026-02-10 21:33:01] 2026-02-11 02:31:54,114 | INFO     | sum of square deviations: 85136480.0
[2026-02-10 21:33:01] 2026-02-11 02:31:54,115 | INFO     | sum of deviations: 847939161.9999999
[2026-02-10 21:33:01] 2026-02-11 02:31:54,115 | INFO     | mean x: 1770775008.0
[2026-02-10 21:33:01] 2026-02-11 02:31:54,115 | INFO     | mean y: 2733669.892307692
[2026-02-10 21:33:01] 2026-02-11 02:31:54,115 | INFO     | intersect: -17633765705.86369
[2026-02-10 21:33:01] 2026-02-11 02:31:54,115 | INFO     | chi2: 0.0466210763966093
[2026-02-10 21:33:01] 2026-02-11 02:31:54,115 | INFO     | current memory leak: 9.96 B/s (using 65 data points, chi2=0.05)
[2026-02-10 21:33:01] 2026-02-11 02:31:54,116 | INFO     | could have reported an average CPU frequency of 1773 MHz (6 samples)
[2026-02-10 21:33:01] 2026-02-11 02:31:54,116 | INFO     | ..............................
[2026-02-10 21:33:01] 2026-02-11 02:31:54,116 | INFO     | . Timing measurements:
[2026-02-10 21:33:01] 2026-02-11 02:31:54,116 | INFO     | . get job = 0 s
[2026-02-10 21:33:01] 2026-02-11 02:31:54,117 | INFO     | . initial setup = 7 s
[2026-02-10 21:33:01] 2026-02-11 02:31:54,117 | INFO     | . payload setup = 6 s
[2026-02-10 21:33:01] 2026-02-11 02:31:54,117 | INFO     | . stage-in = 0 s
[2026-02-10 21:33:01] 2026-02-11 02:31:54,117 | INFO     | . payload execution = 4362 s
[2026-02-10 21:33:01] 2026-02-11 02:31:54,117 | INFO     | . stage-out = 0 s
[2026-02-10 21:33:01] 2026-02-11 02:31:54,117 | INFO     | . log creation = 0 s
[2026-02-10 21:33:01] 2026-02-11 02:31:54,118 | INFO     | ..............................
[2026-02-10 21:33:01] 2026-02-11 02:31:54,195 | INFO     | 
[2026-02-10 21:33:01] 2026-02-11 02:31:54,196 | INFO     | job summary report
[2026-02-10 21:33:01] 2026-02-11 02:31:54,196 | INFO     | --------------------------------------------------
[2026-02-10 21:33:01] 2026-02-11 02:31:54,196 | INFO     | PanDA job id: 7008106111
[2026-02-10 21:33:01] 2026-02-11 02:31:54,196 | INFO     | task id: 48318034
[2026-02-10 21:33:01] 2026-02-11 02:31:54,197 | INFO     | errors: (none)
[2026-02-10 21:33:01] 2026-02-11 02:31:54,197 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-10 21:33:01] 2026-02-11 02:31:54,197 | INFO     | pilot state: finished 
[2026-02-10 21:33:01] 2026-02-11 02:31:54,197 | INFO     | transexitcode: 0
[2026-02-10 21:33:01] 2026-02-11 02:31:54,198 | INFO     | exeerrorcode: 0
[2026-02-10 21:33:01] 2026-02-11 02:31:54,198 | INFO     | exeerrordiag: 
[2026-02-10 21:33:01] 2026-02-11 02:31:54,198 | INFO     | exitcode: 0
[2026-02-10 21:33:01] 2026-02-11 02:31:54,199 | INFO     | exitmsg: OK
[2026-02-10 21:33:01] 2026-02-11 02:31:54,199 | INFO     | cpuconsumptiontime: 47289 s
[2026-02-10 21:33:01] 2026-02-11 02:31:54,200 | INFO     | nevents: 400
[2026-02-10 21:33:01] 2026-02-11 02:31:54,200 | INFO     | neventsw: 0
[2026-02-10 21:33:01] 2026-02-11 02:31:54,200 | INFO     | pid: 27921
[2026-02-10 21:33:01] 2026-02-11 02:31:54,200 | INFO     | pgrp: 27921
[2026-02-10 21:33:01] 2026-02-11 02:31:54,201 | INFO     | corecount: 12
[2026-02-10 21:33:01] 2026-02-11 02:31:54,201 | INFO     | event service: False
[2026-02-10 21:33:01] 2026-02-11 02:31:54,201 | INFO     | sizes: {0: 2281750, 1: 2282211, 11: 2282211, 4373: 2308257, 4375: 2317449}
[2026-02-10 21:33:01] 2026-02-11 02:31:54,201 | INFO     | --------------------------------------------------
[2026-02-10 21:33:01] 2026-02-11 02:31:54,202 | INFO     | 
[2026-02-10 21:33:01] 2026-02-11 02:31:54,202 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-10 21:33:01] 2026-02-11 02:31:54,222 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-10 21:33:01] 2026-02-11 02:31:54,223 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-10 21:33:01] 2026-02-11 02:31:54,223 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-10 21:33:01] 2026-02-11 02:31:54,223 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-10 21:33:01] 2026-02-11 02:31:54,223 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-10 21:33:01] 2026-02-11 02:31:54,223 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-10 21:33:01] 2026-02-11 02:31:54,223 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-10 21:33:01] 2026-02-11 02:31:54,224 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-10 21:33:01] 2026-02-11 02:31:54,224 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-10 21:33:01] 2026-02-11 02:31:54,224 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-10 21:33:01] 2026-02-11 02:31:54,224 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-10 21:33:01] 2026-02-11 02:31:54,224 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-10 21:33:01] 2026-02-11 02:31:54,224 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-10 21:33:01] 2026-02-11 02:31:54,225 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-10 21:33:01] 2026-02-11 02:31:54,225 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-10 21:33:01] 2026-02-11 02:31:54,225 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-10 21:33:01] 2026-02-11 02:31:54,225 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-10 21:33:01] 2026-02-11 02:31:54,225 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-10 21:33:01] 2026-02-11 02:31:54,226 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-10 21:33:01] 2026-02-11 02:31:54,226 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-10 21:33:01] 2026-02-11 02:31:54,226 | INFO     | job 7008106111 has completed (purged errors)
[2026-02-10 21:33:01] 2026-02-11 02:31:54,226 | INFO     | overall cleanup function is called
[2026-02-10 21:33:01] 2026-02-11 02:31:54,278 | WARNING  | process 27921 can no longer be monitored (due to stat problems) - aborting
[2026-02-10 21:33:01] 2026-02-11 02:31:54,348 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 21:33:01] 2026-02-11 02:31:54,429 | INFO     | number of running child processes to parent process 27921: 1
[2026-02-10 21:33:01] 2026-02-11 02:31:54,430 | INFO     | maximum number of monitored processes: 6
[2026-02-10 21:33:01] 2026-02-11 02:31:54,430 | INFO     | aborting job monitoring since job object (job id=7008106111) has expired
[2026-02-10 21:33:01] 2026-02-11 02:31:55,233 | INFO     | --- collectZombieJob: --- 10, [27921]
[2026-02-10 21:33:01] 2026-02-11 02:31:55,233 | INFO     | zombie collector waiting for pid 27921
[2026-02-10 21:33:01] 2026-02-11 02:31:55,233 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-10 21:33:01] 2026-02-11 02:31:55,233 | INFO     | collected zombie processes
[2026-02-10 21:33:01] 2026-02-11 02:31:55,233 | INFO     | will attempt to kill all subprocesses of pid=27921
[2026-02-10 21:33:01] 2026-02-11 02:31:55,318 | INFO     | process IDs to be killed: [27921] (in reverse order)
[2026-02-10 21:33:01] 2026-02-11 02:31:55,369 | WARNING  | found no corresponding commands to process id(s)
[2026-02-10 21:33:01] 2026-02-11 02:31:55,370 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-10 21:33:01] 2026-02-11 02:31:55,374 | INFO     | did not find any defunct processes belonging to 27921
[2026-02-10 21:33:01] 2026-02-11 02:31:55,377 | INFO     | did not find any defunct processes belonging to 27921
[2026-02-10 21:33:01] 2026-02-11 02:31:55,377 | INFO     | ready for new job
[2026-02-10 21:33:01] 2026-02-11 02:31:55,378 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-10 21:33:01] 2026-02-11 02:31:55,379 | INFO     | **************************************
[2026-02-10 21:33:01] 2026-02-11 02:31:55,379 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-10 21:33:01] 2026-02-11 02:31:55,379 | INFO     | **************************************
[2026-02-10 21:33:01] 2026-02-11 02:31:55,379 | INFO     | 
[2026-02-10 21:33:01] 2026-02-11 02:31:55,380 | INFO     | architecture information:
[2026-02-10 21:33:01] 2026-02-11 02:31:55,380 | INFO     | executing command: cat /etc/os-release
[2026-02-10 21:33:01] 2026-02-11 02:31:55,395 | INFO     | cat /etc/os-release:
[2026-02-10 21:33:01] NAME="CentOS Linux"
[2026-02-10 21:33:01] VERSION="7 (Core)"
[2026-02-10 21:33:01] ID="centos"
[2026-02-10 21:33:01] ID_LIKE="rhel fedora"
[2026-02-10 21:33:01] VERSION_ID="7"
[2026-02-10 21:33:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-10 21:33:01] ANSI_COLOR="0;31"
[2026-02-10 21:33:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-10 21:33:01] HOME_URL="https://www.centos.org/"
[2026-02-10 21:33:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-10 21:33:01] 
[2026-02-10 21:33:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-10 21:33:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-10 21:33:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-10 21:33:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-10 21:33:01] 
[2026-02-10 21:33:01] 2026-02-11 02:31:55,396 | INFO     | **************************************
[2026-02-10 21:33:01] 2026-02-11 02:31:55,899 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-10 21:33:01] 2026-02-11 02:31:55,915 | INFO     | sufficient remaining disk space (28791799808 B)
[2026-02-10 21:33:01] 2026-02-11 02:31:55,915 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-10 21:33:01] 2026-02-11 02:31:55,915 | INFO     | current server update state: UPDATING_FINAL
[2026-02-10 21:33:01] 2026-02-11 02:31:55,916 | INFO     | update_server=False
[2026-02-10 21:33:01] 2026-02-11 02:31:55,916 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-10 21:33:01] 2026-02-11 02:31:55,916 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-10 21:33:01] 2026-02-11 02:31:55,916 | INFO     | aborting loop
[2026-02-10 21:33:01] 2026-02-11 02:31:55,916 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-10 21:33:01] 2026-02-11 02:31:55,917 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-10 21:33:01] 2026-02-11 02:31:56,275 | INFO     | all data control threads have been joined
[2026-02-10 21:33:01] 2026-02-11 02:31:56,921 | INFO     | [job] retrieve thread has finished
[2026-02-10 21:33:01] 2026-02-11 02:31:56,922 | INFO     | [job] job monitor thread has finished
[2026-02-10 21:33:01] 2026-02-11 02:31:56,922 | INFO     | [job] queue monitor thread has finished
[2026-02-10 21:33:01] 2026-02-11 02:31:57,027 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-10 21:33:01] 2026-02-11 02:31:57,053 | INFO     | all job control threads have been joined
[2026-02-10 21:33:01] 2026-02-11 02:31:57,141 | INFO     | [job] create_data_payload thread has finished
[2026-02-10 21:33:01] 2026-02-11 02:31:57,147 | INFO     | [data] copytool_in thread has finished
[2026-02-10 21:33:01] 2026-02-11 02:31:57,150 | INFO     | [payload] validate_pre thread has finished
[2026-02-10 21:33:01] 2026-02-11 02:31:57,274 | INFO     | all payload control threads have been joined
[2026-02-10 21:33:01] 2026-02-11 02:31:57,276 | INFO     | [data] control thread has finished
[2026-02-10 21:33:01] 2026-02-11 02:31:57,516 | INFO     | job.realtimelogging is not enabled
[2026-02-10 21:33:01] 2026-02-11 02:31:57,646 | INFO     | [payload] execute_payloads thread has finished
[2026-02-10 21:33:01] 2026-02-11 02:31:58,033 | INFO     | [payload] validate_post thread has finished
[2026-02-10 21:33:01] 2026-02-11 02:31:58,058 | INFO     | [job] control thread has finished
[2026-02-10 21:33:01] 2026-02-11 02:31:58,074 | INFO     | [job] validate thread has finished
[2026-02-10 21:33:01] 2026-02-11 02:31:58,280 | INFO     | [payload] control thread has finished
[2026-02-10 21:33:01] 2026-02-11 02:31:58,447 | INFO     | [payload] failed_post thread has finished
[2026-02-10 21:33:01] 2026-02-11 02:31:58,518 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-10 21:33:01] 2026-02-11 02:31:59,033 | INFO     | [data] copytool_out thread has finished
[2026-02-10 21:33:01] 2026-02-11 02:31:59,922 | INFO     | [data] queue_monitor thread has finished
[2026-02-10 21:33:01] 2026-02-11 02:32:26,352 | INFO     | PID=23500 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-10 21:33:01] 2026-02-11 02:32:26,352 | INFO     | found 0 job(s) in 20 queues
[2026-02-10 21:33:01] 2026-02-11 02:32:26,353 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-10 21:33:01] 2026-02-11 02:32:26,353 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-10 21:33:01] 2026-02-11 02:32:54,431 | INFO     | [monitor] cgroup control has ended
[2026-02-10 21:33:01] 2026-02-11 02:32:56,538 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139703026214720)>', '<ExcThread(monitor, started 139702434772736)>']
[2026-02-10 21:33:01] 2026-02-11 02:32:57,479 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-10 21:33:01] 2026-02-11 02:32:57,479 | INFO     | [monitor] control thread has ended
[2026-02-10 21:33:01] 2026-02-11 02:33:01,552 | INFO     | all workflow threads have been joined
[2026-02-10 21:33:01] 2026-02-11 02:33:01,552 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-10 21:33:01] 2026-02-11 02:33:01,563 | INFO     | traces error code: 0
[2026-02-10 21:33:01] 2026-02-11 02:33:01,563 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-10 21:33:01] 2026-02-11 02:33:01,669 [wrapper] ==== pilot stdout END ====
[2026-02-10 21:33:01] 2026-02-11 02:33:01,673 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-10 21:33:01] 2026-02-11 02:33:01,677 [wrapper] pilotpid: 23500
[2026-02-10 21:33:01] 2026-02-11 02:33:01,681 [wrapper] Pilot exit status: 0
[2026-02-10 21:33:01] 2026-02-11 02:33:01,695 [wrapper] pandaids: 7008106111
[2026-02-10 21:33:01] 2026-02-11 02:33:01,737 [wrapper] cleanup supervisor_pilot 14033 23501
[2026-02-10 21:33:01] 2026-02-11 02:33:01,740 [wrapper] Test setup, not cleaning
[2026-02-10 21:33:01] 2026-02-11 02:33:01,744 [wrapper] apfmon messages muted
[2026-02-10 21:33:01] 2026-02-11 02:33:01,747 [wrapper] ==== wrapper stdout END ====
[2026-02-10 21:33:01] 2026-02-11 02:33:01,751 [wrapper] ==== wrapper stderr END ====
[2026-02-10 21:33:01]  *** Error codes and diagnostics ***
[2026-02-10 21:33:01]     "exeErrorCode": 0,
[2026-02-10 21:33:01]     "exeErrorDiag": "",
[2026-02-10 21:33:01]     "pilotErrorCode": 0,
[2026-02-10 21:33:01]     "pilotErrorDiag": "",
[2026-02-10 21:33:01]  *** Listing of results directory ***
[2026-02-10 21:33:01] total 670728
[2026-02-10 21:33:01] -rw-r--r-- 1 boincer umatlas    584627 Feb 10 14:02 pilot3.tar.gz
[2026-02-10 21:33:01] -rwx------ 1 boincer umatlas     36322 Feb 10 14:04 runpilot2-wrapper.sh
[2026-02-10 21:33:01] -rw-r--r-- 1 boincer umatlas      5111 Feb 10 14:06 queuedata.json
[2026-02-10 21:33:01] -rw-r--r-- 1 boincer umatlas       100 Feb 10 20:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-10 21:33:01] -rwxr-xr-x 1 boincer umatlas      7986 Feb 10 20:18 run_atlas
[2026-02-10 21:33:01] -rw-r--r-- 1 boincer umatlas       105 Feb 10 20:18 job.xml
[2026-02-10 21:33:01] -rw-r--r-- 2 boincer umatlas 499440017 Feb 10 20:18 EVNT.48318032._000271.pool.root.1
[2026-02-10 21:33:01] -rw-r--r-- 2 boincer umatlas     15845 Feb 10 20:18 start_atlas.sh
[2026-02-10 21:33:01] drwxrwx--x 2 boincer umatlas      4096 Feb 10 20:18 shared
[2026-02-10 21:33:01] -rw-r--r-- 2 boincer umatlas    597964 Feb 10 20:18 input.tar.gz
[2026-02-10 21:33:01] -rw-r--r-- 1 boincer umatlas         0 Feb 10 20:18 boinc_lockfile
[2026-02-10 21:33:01] -rw-r--r-- 1 boincer umatlas      2537 Feb 10 20:18 pandaJob.out
[2026-02-10 21:33:01] -rw------- 1 boincer umatlas        57 Feb 10 20:18 setup.sh.local
[2026-02-10 21:33:01] -rw------- 1 boincer umatlas   1009649 Feb 10 20:18 agis_schedconf.cvmfs.json
[2026-02-10 21:33:01] -rw------- 1 boincer umatlas   1512955 Feb 10 20:18 agis_ddmendpoints.agis.ALL.json
[2026-02-10 21:33:01] -rw------- 1 boincer umatlas       444 Feb 10 20:18 workernode_map.json
[2026-02-10 21:33:01] drwx------ 5 boincer umatlas      4096 Feb 10 20:18 pilot3
[2026-02-10 21:33:01] -rw-r--r-- 1 boincer umatlas      5952 Feb 10 21:29 init_data.xml
[2026-02-10 21:33:01] -rw------- 1 boincer umatlas 181385937 Feb 10 21:31 HITS.48318034._015263.pool.root.1
[2026-02-10 21:33:01] -rw------- 1 boincer umatlas        95 Feb 10 21:31 pilot_heartbeat.json
[2026-02-10 21:33:01] -rw-r--r-- 1 boincer umatlas       531 Feb 10 21:31 boinc_task_state.xml
[2026-02-10 21:33:01] -rw------- 1 boincer umatlas      1044 Feb 10 21:31 memory_monitor_summary.json
[2026-02-10 21:33:01] -rw------- 1 boincer umatlas    388416 Feb 10 21:31 log.48318034._015263.job.log.tgz.1
[2026-02-10 21:33:01] -rw------- 1 boincer umatlas      6411 Feb 10 21:31 heartbeat.json
[2026-02-10 21:33:01] -rw-r--r-- 1 boincer umatlas        27 Feb 10 21:32 wrapper_checkpoint.txt
[2026-02-10 21:33:01] -rw-r--r-- 1 boincer umatlas      8192 Feb 10 21:32 boinc_mmap_file
[2026-02-10 21:33:01] -rw------- 1 boincer umatlas      4814 Feb 10 21:33 pilotlog.txt
[2026-02-10 21:33:01] -rw------- 1 boincer umatlas    640004 Feb 10 21:33 log.48318034._015263.job.log.1
[2026-02-10 21:33:01] -rw------- 1 boincer umatlas       357 Feb 10 21:33 output.list
[2026-02-10 21:33:01] -rw-r--r-- 1 boincer umatlas       620 Feb 10 21:33 runtime_log
[2026-02-10 21:33:01] -rw------- 1 boincer umatlas   1044480 Feb 10 21:33 result.tar.gz
[2026-02-10 21:33:01] -rw-r--r-- 1 boincer umatlas      9338 Feb 10 21:33 runtime_log.err
[2026-02-10 21:33:01] -rw------- 1 boincer umatlas       658 Feb 10 21:33 3mrMDmDD898n9Rq4apOajLDm4fhM0noT9bVooX4SDmQzhKDmikHsln.diag
[2026-02-10 21:33:01] -rw-r--r-- 1 boincer umatlas     21252 Feb 10 21:33 stderr.txt
[2026-02-10 21:33:01] HITS file was successfully produced:
[2026-02-10 21:33:01] -rw------- 1 boincer umatlas 181385937 Feb 10 21:31 shared/HITS.pool.root.1
[2026-02-10 21:33:01]  *** Contents of shared directory: ***
[2026-02-10 21:33:01] total 666500
[2026-02-10 21:33:01] -rw-r--r-- 2 boincer umatlas 499440017 Feb 10 20:18 ATLAS.root_0
[2026-02-10 21:33:01] -rw-r--r-- 2 boincer umatlas     15845 Feb 10 20:18 start_atlas.sh
[2026-02-10 21:33:01] -rw-r--r-- 2 boincer umatlas    597964 Feb 10 20:18 input.tar.gz
[2026-02-10 21:33:01] -rw------- 1 boincer umatlas 181385937 Feb 10 21:31 HITS.pool.root.1
[2026-02-10 21:33:01] -rw------- 1 boincer umatlas   1044480 Feb 10 21:33 result.tar.gz
21:33:03 (19523): run_atlas exited; CPU time 47270.786934
21:33:03 (19523): called boinc_finish(0)

</stderr_txt>
]]>

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