Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
00:14:17 (3623344): wrapper (7.7.26015): starting
00:14:17 (3623344): wrapper: running run_atlas (--nthreads 12)
[2026-02-12 00:14:17] Arguments: --nthreads 12
[2026-02-12 00:14:17] Threads: 12
[2026-02-12 00:14:17] Checking for CVMFS
[2026-02-12 00:14:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 00:14:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 00:14:22] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 00:14:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 00:14:22] 2.12.7.0 2640442 1421 46864 156132 2 50 3316825 6144000 0 130560 0 1688422 99.993 53813 568 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-12 00:14:22] CVMFS is ok
[2026-02-12 00:14:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-12 00:14:22] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-12 00:14:22] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-12 00:14:22] Further information can be found at the LHC@home message board.
[2026-02-12 00:14:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 00:14:22] Checking for apptainer binary...
[2026-02-12 00:14:22] apptainer is not installed, using version from CVMFS
[2026-02-12 00:14:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 00:14:23] biggy
[2026-02-12 00:14:23] apptainer works
[2026-02-12 00:14:23] Set ATHENA_PROC_NUMBER=12
[2026-02-12 00:14:23] Set ATHENA_CORE_NUMBER=12
[2026-02-12 00:14:23] Starting ATLAS job with PandaID=7004482961
[2026-02-12 00:14:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/single_8TB/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 00:40:53]  *** The last 200 lines of the pilot log: ***
[2026-02-12 00:40:53]  is_tar=False
[2026-02-12 00:40:53]  lfn=log.48442031._006390.job.log.tgz.1
[2026-02-12 00:40:53]  mtime=0
[2026-02-12 00:40:53]  protocol_id=None
[2026-02-12 00:40:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-12 00:40:53]  replicas=None
[2026-02-12 00:40:53]  scope=mc23_13p6TeV
[2026-02-12 00:40:53]  status=None
[2026-02-12 00:40:53]  status_code=0
[2026-02-12 00:40:53]  storage_token=
[2026-02-12 00:40:53]  surl=/single_8TB/boinc-client/slots/0/PanDA_Pilot-7004482961/log.48442031._006390.job.log.tgz.1
[2026-02-12 00:40:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/40/fb/log.48442031._006390.job.log.tgz.1
[2026-02-12 00:40:53]  workdir=None
[2026-02-12 00:40:53] ]
[2026-02-12 00:40:53] 2026-02-11 23:40:17,460 | INFO     | transferring file log.48442031._006390.job.log.tgz.1 from /single_8TB/boinc-client/slots/0/PanDA_Pilot-7004482961/log.48442031._006390.job.log.tgz.1 to /single_8TB
[2026-02-12 00:40:53] 2026-02-11 23:40:17,460 | INFO     | executing command: /usr/bin/env mv /single_8TB/boinc-client/slots/0/PanDA_Pilot-7004482961/log.48442031._006390.job.log.tgz.1 /single_8TB/boinc-client/slots/0/log.
[2026-02-12 00:40:53] 2026-02-11 23:40:17,467 | INFO     | adding to output.list: log.48442031._006390.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/40/fb/log.48442031._006390.job.log.tg
[2026-02-12 00:40:53] 2026-02-11 23:40:17,467 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-12 00:40:53] 2026-02-11 23:40:17,467 | INFO     | summary of transferred files:
[2026-02-12 00:40:53] 2026-02-11 23:40:17,467 | INFO     |  -- lfn=log.48442031._006390.job.log.tgz.1, status_code=0, status=transferred
[2026-02-12 00:40:53] 2026-02-11 23:40:17,467 | INFO     | stage-out finished correctly
[2026-02-12 00:40:53] 2026-02-11 23:40:17,816 | INFO     | monitor loop #120: job 0:7004482961 is in state 'finished'
[2026-02-12 00:40:53] 2026-02-11 23:40:17,816 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-12 00:40:53] 2026-02-11 23:40:17,860 | INFO     | time since job start (1545s) is within the limit (349056.0s)
[2026-02-12 00:40:53] 2026-02-11 23:40:18,325 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-12 00:40:53] 2026-02-11 23:40:19,865 | INFO     | time since job start (1547s) is within the limit (349056.0s)
[2026-02-12 00:40:53] 2026-02-11 23:40:20,232 | INFO     | job 7004482961 has state=finished
[2026-02-12 00:40:53] 2026-02-11 23:40:20,232 | INFO     | preparing for final server update for job 7004482961 in state='finished'
[2026-02-12 00:40:53] 2026-02-11 23:40:20,319 | INFO     | monitor loop #121: job 0:7004482961 is in state 'finished'
[2026-02-12 00:40:53] 2026-02-11 23:40:20,319 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-12 00:40:53] 2026-02-11 23:40:20,755 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-12 00:40:53] 2026-02-11 23:40:20,755 | INFO     | reading metadata from: /single_8TB/boinc-client/slots/0/PanDA_Pilot-7004482961/jobReport.json
[2026-02-12 00:40:53] 2026-02-11 23:40:20,756 | INFO     | added worker_node to metadata from /single_8TB/boinc-client/slots/0/workernode_map.json
[2026-02-12 00:40:53] 2026-02-11 23:40:20,756 | INFO     | this job has now completed (state=finished)
[2026-02-12 00:40:53] 2026-02-11 23:40:20,756 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-12 00:40:53] 2026-02-11 23:40:20,756 | INFO     | log transfer has been attempted: DONE
[2026-02-12 00:40:53] 2026-02-11 23:40:20,756 | INFO     | job 7004482961 has finished - writing final server update
[2026-02-12 00:40:53] 2026-02-11 23:40:20,756 | INFO     | total number of processed events: 400 (read)
[2026-02-12 00:40:53] 2026-02-11 23:40:20,758 | INFO     | using path: /single_8TB/boinc-client/slots/0/PanDA_Pilot-7004482961/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 00:40:53] 2026-02-11 23:40:20,758 | INFO     | extracted standard info from prmon json
[2026-02-12 00:40:53] 2026-02-11 23:40:20,759 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 00:40:53] 2026-02-11 23:40:20,759 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 00:40:53] 2026-02-11 23:40:20,759 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 00:40:53] 2026-02-11 23:40:20,759 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 00:40:53] 2026-02-11 23:40:20,759 | INFO     | fitting pss+swap vs Time
[2026-02-12 00:40:53] 2026-02-11 23:40:20,759 | INFO     | sum of square deviations: 2120970.0
[2026-02-12 00:40:53] 2026-02-11 23:40:20,759 | INFO     | sum of deviations: 77692589.00000001
[2026-02-12 00:40:53] 2026-02-11 23:40:20,759 | INFO     | mean x: 1770852540.0
[2026-02-12 00:40:53] 2026-02-11 23:40:20,759 | INFO     | mean y: 2720004.736842105
[2026-02-12 00:40:53] 2026-02-11 23:40:20,759 | INFO     | intersect: -64864825773.7636
[2026-02-12 00:40:53] 2026-02-11 23:40:20,759 | INFO     | chi2: 9.505387222222739e-05
[2026-02-12 00:40:53] 2026-02-11 23:40:20,759 | INFO     | current memory leak: 36.63 B/s (using 19 data points, chi2=0.00)
[2026-02-12 00:40:53] 2026-02-11 23:40:20,760 | INFO     | could have reported an average CPU frequency of 5048 MHz (4 samples)
[2026-02-12 00:40:53] 2026-02-11 23:40:20,760 | INFO     | ..............................
[2026-02-12 00:40:53] 2026-02-11 23:40:20,760 | INFO     | . Timing measurements:
[2026-02-12 00:40:53] 2026-02-11 23:40:20,760 | INFO     | . get job = 0 s
[2026-02-12 00:40:53] 2026-02-11 23:40:20,760 | INFO     | . initial setup = 2 s
[2026-02-12 00:40:53] 2026-02-11 23:40:20,760 | INFO     | . payload setup = 1 s
[2026-02-12 00:40:53] 2026-02-11 23:40:20,760 | INFO     | . stage-in = 0 s
[2026-02-12 00:40:53] 2026-02-11 23:40:20,760 | INFO     | . payload execution = 1528 s
[2026-02-12 00:40:53] 2026-02-11 23:40:20,760 | INFO     | . stage-out = 0 s
[2026-02-12 00:40:53] 2026-02-11 23:40:20,760 | INFO     | . log creation = 0 s
[2026-02-12 00:40:53] 2026-02-11 23:40:20,760 | INFO     | ..............................
[2026-02-12 00:40:53] 2026-02-11 23:40:20,781 | INFO     | 
[2026-02-12 00:40:53] 2026-02-11 23:40:20,781 | INFO     | job summary report
[2026-02-12 00:40:53] 2026-02-11 23:40:20,781 | INFO     | --------------------------------------------------
[2026-02-12 00:40:53] 2026-02-11 23:40:20,781 | INFO     | PanDA job id: 7004482961
[2026-02-12 00:40:53] 2026-02-11 23:40:20,781 | INFO     | task id: 48442031
[2026-02-12 00:40:53] 2026-02-11 23:40:20,781 | INFO     | errors: (none)
[2026-02-12 00:40:53] 2026-02-11 23:40:20,781 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 00:40:53] 2026-02-11 23:40:20,781 | INFO     | pilot state: finished 
[2026-02-12 00:40:53] 2026-02-11 23:40:20,781 | INFO     | transexitcode: 0
[2026-02-12 00:40:53] 2026-02-11 23:40:20,781 | INFO     | exeerrorcode: 0
[2026-02-12 00:40:53] 2026-02-11 23:40:20,781 | INFO     | exeerrordiag: 
[2026-02-12 00:40:53] 2026-02-11 23:40:20,781 | INFO     | exitcode: 0
[2026-02-12 00:40:53] 2026-02-11 23:40:20,781 | INFO     | exitmsg: OK
[2026-02-12 00:40:53] 2026-02-11 23:40:20,781 | INFO     | cpuconsumptiontime: 16835 s
[2026-02-12 00:40:53] 2026-02-11 23:40:20,781 | INFO     | nevents: 400
[2026-02-12 00:40:53] 2026-02-11 23:40:20,781 | INFO     | neventsw: 0
[2026-02-12 00:40:53] 2026-02-11 23:40:20,781 | INFO     | pid: 3631964
[2026-02-12 00:40:53] 2026-02-11 23:40:20,781 | INFO     | pgrp: 3631964
[2026-02-12 00:40:53] 2026-02-11 23:40:20,781 | INFO     | corecount: 12
[2026-02-12 00:40:53] 2026-02-11 23:40:20,781 | INFO     | event service: False
[2026-02-12 00:40:53] 2026-02-11 23:40:20,782 | INFO     | sizes: {0: 2282184, 11: 2282184, 1533: 2306985, 1534: 2316003, 1535: 2316059, 1538: 2316253}
[2026-02-12 00:40:53] 2026-02-11 23:40:20,782 | INFO     | --------------------------------------------------
[2026-02-12 00:40:53] 2026-02-11 23:40:20,782 | INFO     | 
[2026-02-12 00:40:53] 2026-02-11 23:40:20,782 | INFO     | executing command: ls -lF /single_8TB/boinc-client/slots/0
[2026-02-12 00:40:53] 2026-02-11 23:40:20,791 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 00:40:53] 2026-02-11 23:40:20,791 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 00:40:53] 2026-02-11 23:40:20,792 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 00:40:53] 2026-02-11 23:40:20,792 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 00:40:53] 2026-02-11 23:40:20,792 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 00:40:53] 2026-02-11 23:40:20,792 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 00:40:53] 2026-02-11 23:40:20,792 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 00:40:53] 2026-02-11 23:40:20,792 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 00:40:53] 2026-02-11 23:40:20,792 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 00:40:53] 2026-02-11 23:40:20,792 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 00:40:53] 2026-02-11 23:40:20,792 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 00:40:53] 2026-02-11 23:40:20,792 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 00:40:53] 2026-02-11 23:40:20,792 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 00:40:53] 2026-02-11 23:40:20,792 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 00:40:53] 2026-02-11 23:40:20,792 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 00:40:53] 2026-02-11 23:40:20,792 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 00:40:53] 2026-02-11 23:40:20,792 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 00:40:53] 2026-02-11 23:40:20,792 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 00:40:53] 2026-02-11 23:40:20,792 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 00:40:53] 2026-02-11 23:40:20,792 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 00:40:53] 2026-02-11 23:40:20,792 | INFO     | job 7004482961 has completed (purged errors)
[2026-02-12 00:40:53] 2026-02-11 23:40:20,792 | INFO     | overall cleanup function is called
[2026-02-12 00:40:53] 2026-02-11 23:40:21,794 | INFO     | --- collectZombieJob: --- 10, [3631964]
[2026-02-12 00:40:53] 2026-02-11 23:40:21,794 | INFO     | zombie collector waiting for pid 3631964
[2026-02-12 00:40:53] 2026-02-11 23:40:21,794 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 00:40:53] 2026-02-11 23:40:21,794 | INFO     | collected zombie processes
[2026-02-12 00:40:53] 2026-02-11 23:40:21,795 | INFO     | will attempt to kill all subprocesses of pid=3631964
[2026-02-12 00:40:53] 2026-02-11 23:40:21,872 | INFO     | process IDs to be killed: [3631964] (in reverse order)
[2026-02-12 00:40:53] 2026-02-11 23:40:21,907 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 00:40:53] 2026-02-11 23:40:21,907 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 00:40:53] 2026-02-11 23:40:21,911 | INFO     | did not find any defunct processes belonging to 3631964
[2026-02-12 00:40:53] 2026-02-11 23:40:21,913 | INFO     | did not find any defunct processes belonging to 3631964
[2026-02-12 00:40:53] 2026-02-11 23:40:21,914 | INFO     | ready for new job
[2026-02-12 00:40:53] 2026-02-11 23:40:21,914 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 00:40:53] 2026-02-11 23:40:21,914 | INFO     | **************************************
[2026-02-12 00:40:53] 2026-02-11 23:40:21,914 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 00:40:53] 2026-02-11 23:40:21,914 | INFO     | **************************************
[2026-02-12 00:40:53] 2026-02-11 23:40:21,914 | INFO     | 
[2026-02-12 00:40:53] 2026-02-11 23:40:21,915 | INFO     | architecture information:
[2026-02-12 00:40:53] 2026-02-11 23:40:21,915 | INFO     | executing command: cat /etc/os-release
[2026-02-12 00:40:53] 2026-02-11 23:40:21,921 | INFO     | cat /etc/os-release:
[2026-02-12 00:40:53] NAME="CentOS Linux"
[2026-02-12 00:40:53] VERSION="7 (Core)"
[2026-02-12 00:40:53] ID="centos"
[2026-02-12 00:40:53] ID_LIKE="rhel fedora"
[2026-02-12 00:40:53] VERSION_ID="7"
[2026-02-12 00:40:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 00:40:53] ANSI_COLOR="0;31"
[2026-02-12 00:40:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 00:40:53] HOME_URL="https://www.centos.org/"
[2026-02-12 00:40:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 00:40:53] 
[2026-02-12 00:40:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 00:40:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 00:40:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 00:40:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 00:40:53] 
[2026-02-12 00:40:53] 2026-02-11 23:40:21,921 | INFO     | **************************************
[2026-02-12 00:40:53] 2026-02-11 23:40:22,423 | INFO     | executing command: df -mP /single_8TB/boinc-client/slots/0
[2026-02-12 00:40:53] 2026-02-11 23:40:22,431 | INFO     | sufficient remaining disk space (3316385841152 B)
[2026-02-12 00:40:53] 2026-02-11 23:40:22,431 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 00:40:53] 2026-02-11 23:40:22,431 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 00:40:53] 2026-02-11 23:40:22,431 | INFO     | update_server=False
[2026-02-12 00:40:53] 2026-02-11 23:40:22,432 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 00:40:53] 2026-02-11 23:40:22,432 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 00:40:53] 2026-02-11 23:40:22,819 | INFO     | job.realtimelogging is not enabled
[2026-02-12 00:40:53] 2026-02-11 23:40:22,822 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-12 00:40:53] 2026-02-11 23:40:22,822 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-12 00:40:53] 2026-02-11 23:40:22,822 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 00:40:53] 2026-02-11 23:40:22,822 | INFO     | will abort loop
[2026-02-12 00:40:53] 2026-02-11 23:40:22,865 | INFO     | all job control threads have been joined
[2026-02-12 00:40:53] 2026-02-11 23:40:22,994 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 00:40:53] 2026-02-11 23:40:23,066 | INFO     | all data control threads have been joined
[2026-02-12 00:40:53] 2026-02-11 23:40:23,436 | INFO     | [job] queue monitor thread has finished
[2026-02-12 00:40:53] 2026-02-11 23:40:23,436 | INFO     | [job] retrieve thread has finished
[2026-02-12 00:40:53] 2026-02-11 23:40:23,443 | INFO     | [data] copytool_in thread has finished
[2026-02-12 00:40:53] 2026-02-11 23:40:23,681 | INFO     | all payload control threads have been joined
[2026-02-12 00:40:53] 2026-02-11 23:40:23,824 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 00:40:53] 2026-02-11 23:40:23,827 | INFO     | [job] job monitor thread has finished
[2026-02-12 00:40:53] 2026-02-11 23:40:23,870 | INFO     | [job] control thread has finished
[2026-02-12 00:40:53] 2026-02-11 23:40:24,071 | INFO     | [data] control thread has finished
[2026-02-12 00:40:53] 2026-02-11 23:40:24,272 | INFO     | [payload] failed_post thread has finished
[2026-02-12 00:40:53] 2026-02-11 23:40:24,350 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 00:40:53] 2026-02-11 23:40:24,395 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 00:40:53] 2026-02-11 23:40:24,686 | INFO     | [payload] control thread has finished
[2026-02-12 00:40:53] 2026-02-11 23:40:24,749 | INFO     | [job] validate thread has finished
[2026-02-12 00:40:53] 2026-02-11 23:40:24,853 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 00:40:53] 2026-02-11 23:40:24,875 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 00:40:53] 2026-02-11 23:40:24,921 | INFO     | [payload] validate_post thread has finished
[2026-02-12 00:40:53] 2026-02-11 23:40:25,000 | INFO     | [data] copytool_out thread has finished
[2026-02-12 00:40:53] 2026-02-11 23:40:28,356 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 00:40:53] 2026-02-11 23:40:33,987 | INFO     | [monitor] cgroup control has ended
[2026-02-12 00:40:53] 2026-02-11 23:40:35,441 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127960938334016)>', '<ExcThread(monitor, started 127959809644288)>']
[2026-02-12 00:40:53] 2026-02-11 23:40:40,456 | INFO     | all workflow threads have been joined
[2026-02-12 00:40:53] 2026-02-11 23:40:40,456 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 00:40:53] 2026-02-11 23:40:40,456 | INFO     | traces error code: 0
[2026-02-12 00:40:53] 2026-02-11 23:40:40,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 00:40:53] 2026-02-11 23:40:53,020 | INFO     | PID=3627468 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-12 00:40:53] 2026-02-11 23:40:53,020 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 00:40:53] 2026-02-11 23:40:53,020 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 00:40:53] 2026-02-11 23:40:53,020 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 00:40:53] 2026-02-11 23:40:53,020 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 00:40:53] 2026-02-11 23:40:53,020 | INFO     | [monitor] control thread has ended
[2026-02-12 00:40:53] 2026-02-11 23:40:53,055 [wrapper] ==== pilot stdout END ====
[2026-02-12 00:40:53] 2026-02-11 23:40:53,056 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 00:40:53] 2026-02-11 23:40:53,057 [wrapper] pilotpid: 3627468
[2026-02-12 00:40:53] 2026-02-11 23:40:53,057 [wrapper] Pilot exit status: 0
[2026-02-12 00:40:53] 2026-02-11 23:40:53,061 [wrapper] pandaids: 7004482961
[2026-02-12 00:40:53] 2026-02-11 23:40:53,085 [wrapper] cleanup supervisor_pilot 3641741 3627469
[2026-02-12 00:40:53] 2026-02-11 23:40:53,086 [wrapper] Test setup, not cleaning
[2026-02-12 00:40:53] 2026-02-11 23:40:53,087 [wrapper] apfmon messages muted
[2026-02-12 00:40:53] 2026-02-11 23:40:53,087 [wrapper] ==== wrapper stdout END ====
[2026-02-12 00:40:53] 2026-02-11 23:40:53,088 [wrapper] ==== wrapper stderr END ====
[2026-02-12 00:40:53]  *** Error codes and diagnostics ***
[2026-02-12 00:40:53]     "exeErrorCode": 0,
[2026-02-12 00:40:53]     "exeErrorDiag": "",
[2026-02-12 00:40:53]     "pilotErrorCode": 0,
[2026-02-12 00:40:53]     "pilotErrorDiag": "",
[2026-02-12 00:40:53]  *** Listing of results directory ***
[2026-02-12 00:40:53] total 671376
[2026-02-12 00:40:53] -rw-r--r-- 1 boinc boinc    584627 Feb  8 10:40 pilot3.tar.gz
[2026-02-12 00:40:53] -rwx------ 1 boinc boinc     36322 Feb  8 10:41 runpilot2-wrapper.sh
[2026-02-12 00:40:53] -rw-r--r-- 1 boinc boinc      5111 Feb  8 10:41 queuedata.json
[2026-02-12 00:40:53] -rw-r--r-- 1 boinc boinc       100 Feb 12 00:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 00:40:53] -rw-r--r-- 1 boinc boinc       105 Feb 12 00:14 job.xml
[2026-02-12 00:40:53] -rwxr-xr-x 1 boinc boinc      7986 Feb 12 00:14 run_atlas
[2026-02-12 00:40:53] -rw-r--r-- 2 boinc boinc 496360561 Feb 12 00:14 EVNT.48442027._000186.pool.root.1
[2026-02-12 00:40:53] -rw-r--r-- 2 boinc boinc     15845 Feb 12 00:14 start_atlas.sh
[2026-02-12 00:40:53] -rw-r--r-- 2 boinc boinc    597948 Feb 12 00:14 input.tar.gz
[2026-02-12 00:40:53] -rw-r--r-- 1 boinc boinc         0 Feb 12 00:14 boinc_setup_complete
[2026-02-12 00:40:53] drwxrwx--x 2 boinc boinc         5 Feb 12 00:14 shared
[2026-02-12 00:40:53] -rw-r--r-- 1 boinc boinc     12895 Feb 12 00:14 init_data.xml
[2026-02-12 00:40:53] -rw-r--r-- 1 boinc boinc         0 Feb 12 00:14 boinc_lockfile
[2026-02-12 00:40:53] -rw-r--r-- 1 boinc boinc      2529 Feb 12 00:14 pandaJob.out
[2026-02-12 00:40:53] -rw------- 1 boinc boinc   1005065 Feb 12 00:14 agis_schedconf.cvmfs.json
[2026-02-12 00:40:53] -rw------- 1 boinc boinc   1512955 Feb 12 00:14 agis_ddmendpoints.agis.ALL.json
[2026-02-12 00:40:53] -rw------- 1 boinc boinc       421 Feb 12 00:14 workernode_map.json
[2026-02-12 00:40:53] drwx------ 5 boinc boinc        22 Feb 12 00:14 pilot3
[2026-02-12 00:40:53] -rw------- 1 boinc boinc 185896879 Feb 12 00:39 HITS.48442031._006390.pool.root.1
[2026-02-12 00:40:53] -rw------- 1 boinc boinc      1045 Feb 12 00:40 memory_monitor_summary.json
[2026-02-12 00:40:53] -rw-r--r-- 1 boinc boinc       530 Feb 12 00:40 boinc_task_state.xml
[2026-02-12 00:40:53] -rw------- 1 boinc boinc    381045 Feb 12 00:40 log.48442031._006390.job.log.tgz.1
[2026-02-12 00:40:53] -rw------- 1 boinc boinc      6289 Feb 12 00:40 heartbeat.json
[2026-02-12 00:40:53] -rw-r--r-- 1 boinc boinc      8192 Feb 12 00:40 boinc_mmap_file
[2026-02-12 00:40:53] -rw-r--r-- 1 boinc boinc        27 Feb 12 00:40 wrapper_checkpoint.txt
[2026-02-12 00:40:53] -rw------- 1 boinc boinc       747 Feb 12 00:40 pilotlog.txt
[2026-02-12 00:40:53] -rw------- 1 boinc boinc        95 Feb 12 00:40 pilot_heartbeat.json
[2026-02-12 00:40:53] -rw------- 1 boinc boinc    262404 Feb 12 00:40 log.48442031._006390.job.log.1
[2026-02-12 00:40:53] -rw------- 1 boinc boinc       357 Feb 12 00:40 output.list
[2026-02-12 00:40:53] -rw------- 1 boinc boinc    665600 Feb 12 00:40 result.tar.gz
[2026-02-12 00:40:53] -rw-r--r-- 1 boinc boinc       620 Feb 12 00:40 runtime_log
[2026-02-12 00:40:53] -rw------- 1 boinc boinc       651 Feb 12 00:40 Ng8KDmHTG98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmbOdKDmmtwyjn.diag
[2026-02-12 00:40:53] -rw-r--r-- 1 boinc boinc      8940 Feb 12 00:40 runtime_log.err
[2026-02-12 00:40:53] -rw-r--r-- 1 boinc boinc     21699 Feb 12 00:40 stderr.txt
[2026-02-12 00:40:53] HITS file was successfully produced:
[2026-02-12 00:40:53] -rw------- 1 boinc boinc 185896879 Feb 12 00:39 shared/HITS.pool.root.1
[2026-02-12 00:40:53]  *** Contents of shared directory: ***
[2026-02-12 00:40:53] total 667432
[2026-02-12 00:40:53] -rw-r--r-- 2 boinc boinc 496360561 Feb 12 00:14 ATLAS.root_0
[2026-02-12 00:40:53] -rw-r--r-- 2 boinc boinc     15845 Feb 12 00:14 start_atlas.sh
[2026-02-12 00:40:53] -rw-r--r-- 2 boinc boinc    597948 Feb 12 00:14 input.tar.gz
[2026-02-12 00:40:53] -rw------- 1 boinc boinc 185896879 Feb 12 00:39 HITS.pool.root.1
[2026-02-12 00:40:53] -rw------- 1 boinc boinc    665600 Feb 12 00:40 result.tar.gz
00:40:54 (3623344): run_atlas exited; CPU time 16839.414696
00:40:54 (3623344): called boinc_finish(0)

</stderr_txt>
]]>

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