Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:33:19 (3452897): wrapper (7.7.26015): starting
19:33:19 (3452897): wrapper: running run_atlas (--nthreads 9)
[2026-02-10 19:33:19] Arguments: --nthreads 9
[2026-02-10 19:33:19] Threads: 9
[2026-02-10 19:33:19] Checking for CVMFS
[2026-02-10 19:33:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 19:33:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 19:33:19] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 19:33:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 19:33:19] 2.13.3.0 12846 140168 231612 156097 2 236 23882278 32935937 27672 16776704 0 641752418 99.512 871383214 37665 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-10 19:33:19] CVMFS is ok
[2026-02-10 19:33:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-10 19:33:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-10 19:33:19] Further information can be found at the LHC@home message board.
[2026-02-10 19:33:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 19:33:19] Checking for apptainer binary...
[2026-02-10 19:33:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 19:33:19] Running /usr/bin/apptainer --version
[2026-02-10 19:33:19] apptainer version 1.4.5-2.el9
[2026-02-10 19:33:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 19:33:20] c7-16-9.aglt2.org
[2026-02-10 19:33:20] apptainer works
[2026-02-10 19:33:20] Set ATHENA_PROC_NUMBER=9
[2026-02-10 19:33:20] Set ATHENA_CORE_NUMBER=9
[2026-02-10 19:33:20] Starting ATLAS job with PandaID=7011001803
[2026-02-10 19:33:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-10 23:22:20]  *** The last 200 lines of the pilot log: ***
[2026-02-10 23:22:20] 2026-02-11 04:21:19,783 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7011001803/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 23:22:20] 2026-02-11 04:21:19,784 | INFO     | extracted standard info from prmon json
[2026-02-10 23:22:20] 2026-02-11 04:21:19,784 | INFO     | extracted standard memory fields from prmon json
[2026-02-10 23:22:20] 2026-02-11 04:21:19,784 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-10 23:22:20] 2026-02-11 04:21:19,785 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-10 23:22:20] 2026-02-11 04:21:19,785 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-10 23:22:20] 2026-02-11 04:21:19,788 | INFO     | fitting pss+swap vs Time
[2026-02-10 23:22:20] 2026-02-11 04:21:19,789 | INFO     | sum of square deviations: 3438627602.2062736
[2026-02-10 23:22:20] 2026-02-11 04:21:19,790 | INFO     | sum of deviations: 54890138528.26012
[2026-02-10 23:22:20] 2026-02-11 04:21:19,791 | INFO     | mean x: 1770776877.0896862
[2026-02-10 23:22:20] 2026-02-11 04:21:19,791 | INFO     | mean y: 2542668.2869955157
[2026-02-10 23:22:20] 2026-02-11 04:21:19,791 | INFO     | intersect: -28264021592.32934
[2026-02-10 23:22:20] 2026-02-11 04:21:19,791 | INFO     | chi2: 4.9694514510986565
[2026-02-10 23:22:20] 2026-02-11 04:21:19,791 | INFO     | sum of square deviations: 3212480624.6651497
[2026-02-10 23:22:20] 2026-02-11 04:21:19,793 | INFO     | sum of deviations: 83358533156.77063
[2026-02-10 23:22:20] 2026-02-11 04:21:19,793 | INFO     | mean x: 1770776724.5917432
[2026-02-10 23:22:20] 2026-02-11 04:21:19,793 | INFO     | mean y: 2561590.76146789
[2026-02-10 23:22:20] 2026-02-11 04:21:19,793 | INFO     | intersect: -45946151430.81651
[2026-02-10 23:22:20] 2026-02-11 04:21:19,793 | INFO     | chi2: 3.5192771244582794
[2026-02-10 23:22:20] 2026-02-11 04:21:19,793 | INFO     | current chi2=3.5192771244582794 (change=29.18177873173043 %)
[2026-02-10 23:22:20] 2026-02-11 04:21:19,794 | INFO     | sum of square deviations: 2996473372.1220555
[2026-02-10 23:22:20] 2026-02-11 04:21:19,795 | INFO     | sum of deviations: 81269847747.09853
[2026-02-10 23:22:20] 2026-02-11 04:21:19,795 | INFO     | mean x: 1770776572.0938966
[2026-02-10 23:22:20] 2026-02-11 04:21:19,795 | INFO     | mean y: 2560115.8450704226
[2026-02-10 23:22:20] 2026-02-11 04:21:19,795 | INFO     | intersect: -48024144792.35996
[2026-02-10 23:22:20] 2026-02-11 04:21:19,796 | INFO     | chi2: 3.521613986321312
[2026-02-10 23:22:20] 2026-02-11 04:21:19,796 | INFO     | current chi2=3.521613986321312 (change=-0.066401757531167 %)
[2026-02-10 23:22:20] 2026-02-11 04:21:19,796 | INFO     | right removable region: 212
[2026-02-10 23:22:20] 2026-02-11 04:21:19,796 | INFO     | sum of square deviations: 3212468424.6651497
[2026-02-10 23:22:20] 2026-02-11 04:21:19,797 | INFO     | sum of deviations: -9520908304.050467
[2026-02-10 23:22:20] 2026-02-11 04:21:19,797 | INFO     | mean x: 1770777029.5917432
[2026-02-10 23:22:20] 2026-02-11 04:21:19,798 | INFO     | mean y: 2585987.527522936
[2026-02-10 23:22:20] 2026-02-11 04:21:19,798 | INFO     | intersect: 5250701609.837236
[2026-02-10 23:22:20] 2026-02-11 04:21:19,798 | INFO     | chi2: 1.9489598686886702
[2026-02-10 23:22:20] 2026-02-11 04:21:19,798 | INFO     | current chi2=1.9489598686886702 (change=60.78118706124415 %)
[2026-02-10 23:22:20] 2026-02-11 04:21:19,798 | INFO     | sum of square deviations: 2996448972.1220555
[2026-02-10 23:22:20] 2026-02-11 04:21:19,800 | INFO     | sum of deviations: -29950067068.507042
[2026-02-10 23:22:20] 2026-02-11 04:21:19,800 | INFO     | mean x: 1770777182.0938966
[2026-02-10 23:22:20] 2026-02-11 04:21:19,800 | INFO     | mean y: 2600388.2253521127
[2026-02-10 23:22:20] 2026-02-11 04:21:19,800 | INFO     | intersect: 17701849019.025604
[2026-02-10 23:22:20] 2026-02-11 04:21:19,800 | INFO     | chi2: 1.6480014920887034
[2026-02-10 23:22:20] 2026-02-11 04:21:19,800 | INFO     | current chi2=1.6480014920887034 (change=15.44199967557374 %)
[2026-02-10 23:22:20] 2026-02-11 04:21:19,800 | INFO     | left removable region: 20
[2026-02-10 23:22:20] 2026-02-11 04:21:19,801 | INFO     | sum of square deviations: 2194671437.91666
[2026-02-10 23:22:20] 2026-02-11 04:21:19,802 | INFO     | sum of deviations: -9494575256.208332
[2026-02-10 23:22:20] 2026-02-11 04:21:19,802 | INFO     | mean x: 1770777151.6041667
[2026-02-10 23:22:20] 2026-02-11 04:21:19,802 | INFO     | mean y: 2628453.2604166665
[2026-02-10 23:22:20] 2026-02-11 04:21:19,802 | INFO     | intersect: 7663354627.30672
[2026-02-10 23:22:20] 2026-02-11 04:21:19,802 | INFO     | chi2: 0.04216298232088059
[2026-02-10 23:22:20] 2026-02-11 04:21:19,802 | INFO     | current memory leak: -4.33 B/s (using 192 data points, chi2=0.04)
[2026-02-10 23:22:20] 2026-02-11 04:21:19,806 | INFO     | could have reported an average CPU frequency of 3156 MHz (11 samples)
[2026-02-10 23:22:20] 2026-02-11 04:21:19,806 | INFO     | ..............................
[2026-02-10 23:22:20] 2026-02-11 04:21:19,806 | INFO     | . Timing measurements:
[2026-02-10 23:22:20] 2026-02-11 04:21:19,806 | INFO     | . get job = 0 s
[2026-02-10 23:22:20] 2026-02-11 04:21:19,806 | INFO     | . initial setup = 12 s
[2026-02-10 23:22:20] 2026-02-11 04:21:19,806 | INFO     | . payload setup = 36 s
[2026-02-10 23:22:20] 2026-02-11 04:21:19,806 | INFO     | . stage-in = 0 s
[2026-02-10 23:22:20] 2026-02-11 04:21:19,806 | INFO     | . payload execution = 13587 s
[2026-02-10 23:22:20] 2026-02-11 04:21:19,807 | INFO     | . stage-out = 5 s
[2026-02-10 23:22:20] 2026-02-11 04:21:19,807 | INFO     | . log creation = 0 s
[2026-02-10 23:22:20] 2026-02-11 04:21:19,807 | INFO     | ..............................
[2026-02-10 23:22:20] 2026-02-11 04:21:19,906 | INFO     | 
[2026-02-10 23:22:20] 2026-02-11 04:21:19,908 | INFO     | job summary report
[2026-02-10 23:22:20] 2026-02-11 04:21:19,908 | INFO     | --------------------------------------------------
[2026-02-10 23:22:20] 2026-02-11 04:21:19,909 | INFO     | PanDA job id: 7011001803
[2026-02-10 23:22:20] 2026-02-11 04:21:19,909 | INFO     | task id: 48431096
[2026-02-10 23:22:20] 2026-02-11 04:21:19,909 | INFO     | errors: (none)
[2026-02-10 23:22:20] 2026-02-11 04:21:19,909 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-10 23:22:20] 2026-02-11 04:21:19,909 | INFO     | pilot state: finished 
[2026-02-10 23:22:20] 2026-02-11 04:21:19,909 | INFO     | transexitcode: 0
[2026-02-10 23:22:20] 2026-02-11 04:21:19,910 | INFO     | exeerrorcode: 0
[2026-02-10 23:22:20] 2026-02-11 04:21:19,910 | INFO     | exeerrordiag: 
[2026-02-10 23:22:20] 2026-02-11 04:21:19,910 | INFO     | exitcode: 0
[2026-02-10 23:22:20] 2026-02-11 04:21:19,910 | INFO     | exitmsg: OK
[2026-02-10 23:22:20] 2026-02-11 04:21:19,910 | INFO     | cpuconsumptiontime: 45728 s
[2026-02-10 23:22:20] 2026-02-11 04:21:19,910 | INFO     | nevents: 400
[2026-02-10 23:22:20] 2026-02-11 04:21:19,910 | INFO     | neventsw: 0
[2026-02-10 23:22:20] 2026-02-11 04:21:19,910 | INFO     | pid: 3462083
[2026-02-10 23:22:20] 2026-02-11 04:21:19,911 | INFO     | pgrp: 3462083
[2026-02-10 23:22:20] 2026-02-11 04:21:19,911 | INFO     | corecount: 9
[2026-02-10 23:22:20] 2026-02-11 04:21:19,911 | INFO     | event service: False
[2026-02-10 23:22:20] 2026-02-11 04:21:19,911 | INFO     | sizes: {0: 2281780, 1: 2282241, 12: 2282241, 13628: 2312453, 13629: 2312452, 13636: 2321506, 13639: 2321690, 13640: 2321884}
[2026-02-10 23:22:20] 2026-02-11 04:21:19,911 | INFO     | --------------------------------------------------
[2026-02-10 23:22:20] 2026-02-11 04:21:19,911 | INFO     | 
[2026-02-10 23:22:20] 2026-02-11 04:21:19,911 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-02-10 23:22:20] 2026-02-11 04:21:19,960 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-10 23:22:20] 2026-02-11 04:21:19,961 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-10 23:22:20] 2026-02-11 04:21:19,961 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-10 23:22:20] 2026-02-11 04:21:19,961 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-10 23:22:20] 2026-02-11 04:21:19,961 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-10 23:22:20] 2026-02-11 04:21:19,961 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-10 23:22:20] 2026-02-11 04:21:19,962 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-10 23:22:20] 2026-02-11 04:21:19,962 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-10 23:22:20] 2026-02-11 04:21:19,962 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-10 23:22:20] 2026-02-11 04:21:19,965 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-10 23:22:20] 2026-02-11 04:21:19,965 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-10 23:22:20] 2026-02-11 04:21:19,965 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-10 23:22:20] 2026-02-11 04:21:19,965 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-10 23:22:20] 2026-02-11 04:21:19,965 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-10 23:22:20] 2026-02-11 04:21:19,965 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-10 23:22:20] 2026-02-11 04:21:19,965 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-10 23:22:20] 2026-02-11 04:21:19,965 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-10 23:22:20] 2026-02-11 04:21:19,965 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-10 23:22:20] 2026-02-11 04:21:19,966 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-10 23:22:20] 2026-02-11 04:21:19,966 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-10 23:22:20] 2026-02-11 04:21:19,966 | INFO     | job 7011001803 has completed (purged errors)
[2026-02-10 23:22:20] 2026-02-11 04:21:19,966 | INFO     | overall cleanup function is called
[2026-02-10 23:22:20] 2026-02-11 04:21:20,352 | INFO     | PID=3456641 has CPU usage=15.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-10 23:22:20] 2026-02-11 04:21:20,352 | INFO     | .. there are 36 such processes running
[2026-02-10 23:22:20] 2026-02-11 04:21:20,982 | INFO     | --- collectZombieJob: --- 10, [3462083]
[2026-02-10 23:22:20] 2026-02-11 04:21:20,982 | INFO     | zombie collector waiting for pid 3462083
[2026-02-10 23:22:20] 2026-02-11 04:21:20,982 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-10 23:22:20] 2026-02-11 04:21:20,982 | INFO     | collected zombie processes
[2026-02-10 23:22:20] 2026-02-11 04:21:20,982 | INFO     | will attempt to kill all subprocesses of pid=3462083
[2026-02-10 23:22:20] 2026-02-11 04:21:22,418 | INFO     | process IDs to be killed: [3462083] (in reverse order)
[2026-02-10 23:22:20] 2026-02-11 04:21:22,841 | WARNING  | found no corresponding commands to process id(s)
[2026-02-10 23:22:20] 2026-02-11 04:21:22,842 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-10 23:22:20] 2026-02-11 04:21:22,890 | INFO     | did not find any defunct processes belonging to 3462083
[2026-02-10 23:22:20] 2026-02-11 04:21:23,021 | INFO     | did not find any defunct processes belonging to 3462083
[2026-02-10 23:22:20] 2026-02-11 04:21:23,021 | INFO     | ready for new job
[2026-02-10 23:22:20] 2026-02-11 04:21:23,021 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-10 23:22:20] 2026-02-11 04:21:23,042 | INFO     | **************************************
[2026-02-10 23:22:20] 2026-02-11 04:21:23,043 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-10 23:22:20] 2026-02-11 04:21:23,043 | INFO     | **************************************
[2026-02-10 23:22:20] 2026-02-11 04:21:23,043 | INFO     | 
[2026-02-10 23:22:20] 2026-02-11 04:21:23,068 | INFO     | architecture information:
[2026-02-10 23:22:20] 2026-02-11 04:21:23,095 | INFO     | executing command: cat /etc/os-release
[2026-02-10 23:22:20] 2026-02-11 04:21:23,132 | INFO     | cat /etc/os-release:
[2026-02-10 23:22:20] NAME="CentOS Linux"
[2026-02-10 23:22:20] VERSION="7 (Core)"
[2026-02-10 23:22:20] ID="centos"
[2026-02-10 23:22:20] ID_LIKE="rhel fedora"
[2026-02-10 23:22:20] VERSION_ID="7"
[2026-02-10 23:22:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-10 23:22:20] ANSI_COLOR="0;31"
[2026-02-10 23:22:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-10 23:22:20] HOME_URL="https://www.centos.org/"
[2026-02-10 23:22:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-10 23:22:20] 
[2026-02-10 23:22:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-10 23:22:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-10 23:22:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-10 23:22:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-10 23:22:20] 
[2026-02-10 23:22:20] 2026-02-11 04:21:23,132 | INFO     | **************************************
[2026-02-10 23:22:20] 2026-02-11 04:21:23,636 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-02-10 23:22:20] 2026-02-11 04:21:23,686 | INFO     | sufficient remaining disk space (70476890112 B)
[2026-02-10 23:22:20] 2026-02-11 04:21:23,686 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-10 23:22:20] 2026-02-11 04:21:23,686 | INFO     | current server update state: UPDATING_FINAL
[2026-02-10 23:22:20] 2026-02-11 04:21:23,686 | INFO     | update_server=False
[2026-02-10 23:22:20] 2026-02-11 04:21:23,686 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-10 23:22:20] 2026-02-11 04:21:23,689 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-10 23:22:20] 2026-02-11 04:21:23,689 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-10 23:22:20] 2026-02-11 04:21:23,689 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-10 23:22:20] 2026-02-11 04:21:23,689 | INFO     | will abort loop
[2026-02-10 23:22:20] 2026-02-11 04:21:23,921 | INFO     | all job control threads have been joined
[2026-02-10 23:22:20] 2026-02-11 04:21:24,068 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-10 23:22:20] 2026-02-11 04:21:24,224 | INFO     | all data control threads have been joined
[2026-02-10 23:22:20] 2026-02-11 04:21:24,579 | INFO     | all payload control threads have been joined
[2026-02-10 23:22:20] 2026-02-11 04:21:24,691 | INFO     | [job] retrieve thread has finished
[2026-02-10 23:22:20] 2026-02-11 04:21:24,700 | INFO     | [job] job monitor thread has finished
[2026-02-10 23:22:20] 2026-02-11 04:21:24,754 | INFO     | [payload] execute_payloads thread has finished
[2026-02-10 23:22:20] 2026-02-11 04:21:24,853 | INFO     | [payload] validate_pre thread has finished
[2026-02-10 23:22:20] 2026-02-11 04:21:24,914 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-10 23:22:20] 2026-02-11 04:21:24,942 | INFO     | [job] control thread has finished
[2026-02-10 23:22:20] 2026-02-11 04:21:24,980 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-10 23:22:20] 2026-02-11 04:21:24,987 | INFO     | [job] validate thread has finished
[2026-02-10 23:22:20] 2026-02-11 04:21:25,222 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-10 23:22:20] 2026-02-11 04:21:25,229 | INFO     | [data] control thread has finished
[2026-02-10 23:22:20] 2026-02-11 04:21:25,550 | INFO     | [job] create_data_payload thread has finished
[2026-02-10 23:22:20] 2026-02-11 04:21:25,586 | INFO     | [payload] control thread has finished
[2026-02-10 23:22:20] 2026-02-11 04:21:25,629 | INFO     | [payload] failed_post thread has finished
[2026-02-10 23:22:20] 2026-02-11 04:21:25,920 | INFO     | [job] queue monitor thread has finished
[2026-02-10 23:22:20] 2026-02-11 04:21:25,963 | INFO     | [data] copytool_in thread has finished
[2026-02-10 23:22:20] 2026-02-11 04:21:26,079 | INFO     | [data] copytool_out thread has finished
[2026-02-10 23:22:20] 2026-02-11 04:21:26,279 | INFO     | [payload] validate_post thread has finished
[2026-02-10 23:22:20] 2026-02-11 04:21:29,264 | INFO     | [data] queue_monitor thread has finished
[2026-02-10 23:22:20] 2026-02-11 04:21:55,200 | INFO     | PID=3456641 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-10 23:22:20] 2026-02-11 04:21:55,200 | INFO     | .. there are 36 such processes running
[2026-02-10 23:22:20] 2026-02-11 04:21:55,201 | INFO     | found 0 job(s) in 20 queues
[2026-02-10 23:22:20] 2026-02-11 04:21:55,201 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-10 23:22:20] 2026-02-11 04:21:55,201 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-10 23:22:20] 2026-02-11 04:22:11,668 | INFO     | [monitor] cgroup control has ended
[2026-02-10 23:22:20] 2026-02-11 04:22:13,128 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140475720677184)>', '<ExcThread(monitor, started 140475084302080)>']
[2026-02-10 23:22:20] 2026-02-11 04:22:13,374 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-10 23:22:20] 2026-02-11 04:22:13,374 | INFO     | [monitor] control thread has ended
[2026-02-10 23:22:20] 2026-02-11 04:22:18,154 | INFO     | all workflow threads have been joined
[2026-02-10 23:22:20] 2026-02-11 04:22:18,154 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-10 23:22:20] 2026-02-11 04:22:18,154 | INFO     | traces error code: 0
[2026-02-10 23:22:20] 2026-02-11 04:22:18,154 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-10 23:22:20] 2026-02-11 04:22:19,153 [wrapper] ==== pilot stdout END ====
[2026-02-10 23:22:20] 2026-02-11 04:22:19,198 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-10 23:22:20] 2026-02-11 04:22:19,227 [wrapper] pilotpid: 3456641
[2026-02-10 23:22:20] 2026-02-11 04:22:19,259 [wrapper] Pilot exit status: 0
[2026-02-10 23:22:20] 2026-02-11 04:22:19,336 [wrapper] pandaids: 7011001803
[2026-02-10 23:22:20] 2026-02-11 04:22:19,824 [wrapper] cleanup supervisor_pilot  200120 3456642
[2026-02-10 23:22:20] 2026-02-11 04:22:19,846 [wrapper] Test setup, not cleaning
[2026-02-10 23:22:20] 2026-02-11 04:22:19,849 [wrapper] apfmon messages muted
[2026-02-10 23:22:20] 2026-02-11 04:22:19,868 [wrapper] ==== wrapper stdout END ====
[2026-02-10 23:22:20] 2026-02-11 04:22:19,872 [wrapper] ==== wrapper stderr END ====
[2026-02-10 23:22:20]  *** Error codes and diagnostics ***
[2026-02-10 23:22:20]     "exeErrorCode": 0,
[2026-02-10 23:22:20]     "exeErrorDiag": "",
[2026-02-10 23:22:20]     "pilotErrorCode": 0,
[2026-02-10 23:22:20]     "pilotErrorDiag": "",
[2026-02-10 23:22:20]  *** Listing of results directory ***
[2026-02-10 23:22:20] total 941420
[2026-02-10 23:22:20] -rw-r--r--. 1 boincer umatlas    584627 Feb 10 14:02 pilot3.tar.gz
[2026-02-10 23:22:20] -rwx------. 1 boincer umatlas     36322 Feb 10 14:02 runpilot2-wrapper.sh
[2026-02-10 23:22:20] -rw-r--r--. 1 boincer umatlas      5111 Feb 10 14:03 queuedata.json
[2026-02-10 23:22:20] -rw-r--r--. 1 boincer umatlas       100 Feb 10 19:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-10 23:22:20] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 10 19:33 run_atlas
[2026-02-10 23:22:20] -rw-r--r--. 1 boincer umatlas       105 Feb 10 19:33 job.xml
[2026-02-10 23:22:20] -rw-r--r--. 2 boincer umatlas 678094626 Feb 10 19:33 EVNT.48431094._000537.pool.root.1
[2026-02-10 23:22:20] -rw-r--r--. 2 boincer umatlas     15845 Feb 10 19:33 start_atlas.sh
[2026-02-10 23:22:20] drwxrwx--x. 2 boincer umatlas      4096 Feb 10 19:33 shared
[2026-02-10 23:22:20] -rw-r--r--. 2 boincer umatlas    597963 Feb 10 19:33 input.tar.gz
[2026-02-10 23:22:20] -rw-r--r--. 1 boincer umatlas         0 Feb 10 19:33 boinc_lockfile
[2026-02-10 23:22:20] -rw-r--r--. 1 boincer umatlas      2555 Feb 10 19:33 pandaJob.out
[2026-02-10 23:22:20] -rw-------. 1 boincer umatlas        57 Feb 10 19:33 setup.sh.local
[2026-02-10 23:22:20] -rw-------. 1 boincer umatlas   1009649 Feb 10 19:33 agis_schedconf.cvmfs.json
[2026-02-10 23:22:20] -rw-------. 1 boincer umatlas       429 Feb 10 19:33 workernode_map.json
[2026-02-10 23:22:20] drwx------. 5 boincer umatlas      4096 Feb 10 19:33 pilot3
[2026-02-10 23:22:20] -rw-------. 1 boincer umatlas 277662333 Feb 10 23:18 HITS.48431096._024969.pool.root.1
[2026-02-10 23:22:20] -rw-r--r--. 1 boincer umatlas       531 Feb 10 23:18 boinc_task_state.xml
[2026-02-10 23:22:20] -rw-r--r--. 1 boincer umatlas      6946 Feb 10 23:20 init_data.xml
[2026-02-10 23:22:20] -rw-------. 1 boincer umatlas      1045 Feb 10 23:21 memory_monitor_summary.json
[2026-02-10 23:22:20] -rw-------. 1 boincer umatlas   1512955 Feb 10 23:21 agis_ddmendpoints.agis.ALL.json
[2026-02-10 23:22:20] -rw-------. 1 boincer umatlas    461069 Feb 10 23:21 log.48431096._024969.job.log.tgz.1
[2026-02-10 23:22:20] -rw-------. 1 boincer umatlas      6351 Feb 10 23:21 heartbeat.json
[2026-02-10 23:22:20] -rw-------. 1 boincer umatlas        95 Feb 10 23:21 pilot_heartbeat.json
[2026-02-10 23:22:20] -rw-r--r--. 1 boincer umatlas        28 Feb 10 23:22 wrapper_checkpoint.txt
[2026-02-10 23:22:20] -rw-r--r--. 1 boincer umatlas      8192 Feb 10 23:22 boinc_mmap_file
[2026-02-10 23:22:20] -rw-------. 1 boincer umatlas      5006 Feb 10 23:22 pilotlog.txt
[2026-02-10 23:22:20] -rw-------. 1 boincer umatlas   1696111 Feb 10 23:22 log.48431096._024969.job.log.1
[2026-02-10 23:22:20] -rw-------. 1 boincer umatlas       357 Feb 10 23:22 output.list
[2026-02-10 23:22:20] -rw-r--r--. 1 boincer umatlas       620 Feb 10 23:22 runtime_log
[2026-02-10 23:22:20] -rw-------. 1 boincer umatlas   2170880 Feb 10 23:22 result.tar.gz
[2026-02-10 23:22:20] -rw-------. 1 boincer umatlas       658 Feb 10 23:22 YcoNDmnB898nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmEgiKDmklp8Jo.diag
[2026-02-10 23:22:20] -rw-r--r--. 1 boincer umatlas      9337 Feb 10 23:22 runtime_log.err
[2026-02-10 23:22:20] -rw-r--r--. 1 boincer umatlas     21263 Feb 10 23:22 stderr.txt
[2026-02-10 23:22:20] HITS file was successfully produced:
[2026-02-10 23:22:20] -rw-------. 1 boincer umatlas 277662333 Feb 10 23:18 shared/HITS.pool.root.1
[2026-02-10 23:22:20]  *** Contents of shared directory: ***
[2026-02-10 23:22:20] total 936088
[2026-02-10 23:22:20] -rw-r--r--. 2 boincer umatlas 678094626 Feb 10 19:33 ATLAS.root_0
[2026-02-10 23:22:20] -rw-r--r--. 2 boincer umatlas     15845 Feb 10 19:33 start_atlas.sh
[2026-02-10 23:22:20] -rw-r--r--. 2 boincer umatlas    597963 Feb 10 19:33 input.tar.gz
[2026-02-10 23:22:20] -rw-------. 1 boincer umatlas 277662333 Feb 10 23:18 HITS.pool.root.1
[2026-02-10 23:22:20] -rw-------. 1 boincer umatlas   2170880 Feb 10 23:22 result.tar.gz
23:22:21 (3452897): run_atlas exited; CPU time 46251.736353
23:22:21 (3452897): called boinc_finish(0)

</stderr_txt>
]]>

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