Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:31:30 (606201): wrapper (7.7.26015): starting
19:31:30 (606201): wrapper: running run_atlas (--nthreads 8)
[2026-02-10 19:31:30] Arguments: --nthreads 8
[2026-02-10 19:31:30] Threads: 8
[2026-02-10 19:31:30] Checking for CVMFS
[2026-02-10 19:31:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 19:31:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 19:31:31] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 19:31:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 19:31:32] 2.13.3.0 9597 69461 174912 156097 0 192 37378333 40960001 32094 16776704 0 498577335 99.722 363998847 45965 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-10 19:31:32] CVMFS is ok
[2026-02-10 19:31:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-10 19:31:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-10 19:31:32] Further information can be found at the LHC@home message board.
[2026-02-10 19:31:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 19:31:32] Checking for apptainer binary...
[2026-02-10 19:31:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 19:31:32] Running /usr/bin/apptainer --version
[2026-02-10 19:31:32] apptainer version 1.4.5-2.el9
[2026-02-10 19:31:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 19:31:33] c-208-38.aglt2.org
[2026-02-10 19:31:33] apptainer works
[2026-02-10 19:31:33] Set ATHENA_PROC_NUMBER=8
[2026-02-10 19:31:33] Set ATHENA_CORE_NUMBER=8
[2026-02-10 19:31:33] Starting ATLAS job with PandaID=7008106233
[2026-02-10 19:31:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
20:40:13 (606201): BOINC client no longer exists - exiting
20:40:13 (606201): timer handler: client dead, exiting
20:45:41 (909367): wrapper (7.7.26015): starting
20:45:41 (909367): wrapper: running run_atlas (--nthreads 8)
[2026-02-10 20:45:41] Arguments: --nthreads 8
[2026-02-10 20:45:41] Threads: 8
[2026-02-10 20:45:41] This job has been restarted, cleaning up previous attempt
[2026-02-10 20:45:41] Checking for CVMFS
[2026-02-10 20:45:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 20:45:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 20:45:41] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 20:45:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 20:45:41] 2.13.3.0 9597 69535 189848 156098 2 503 38790217 40960001 26803 16776704 0 498892230 99.722 364296110 45958 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-10 20:45:41] CVMFS is ok
[2026-02-10 20:45:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-10 20:45:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-10 20:45:42] Further information can be found at the LHC@home message board.
[2026-02-10 20:45:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 20:45:42] Checking for apptainer binary...
[2026-02-10 20:45:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 20:45:42] Running /usr/bin/apptainer --version
[2026-02-10 20:45:42] apptainer version 1.4.5-2.el9
[2026-02-10 20:45:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 20:45:42] c-208-38.aglt2.org
[2026-02-10 20:45:42] apptainer works
[2026-02-10 20:45:42] Set ATHENA_PROC_NUMBER=8
[2026-02-10 20:45:42] Set ATHENA_CORE_NUMBER=8
[2026-02-10 20:45:42] Starting ATLAS job with PandaID=7008106233
[2026-02-10 20:45:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-10 22:56:22]  *** The last 200 lines of the pilot log: ***
[2026-02-10 22:56:22] 2026-02-11 03:55:31,037 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-10 22:56:22] 2026-02-11 03:55:31,895 | INFO     | time since job start (7771s) is within the limit (349056.0s)
[2026-02-10 22:56:22] 2026-02-11 03:55:32,557 | INFO     | job 7008106233 has state=finished
[2026-02-10 22:56:22] 2026-02-11 03:55:32,557 | INFO     | preparing for final server update for job 7008106233 in state='finished'
[2026-02-10 22:56:22] 2026-02-11 03:55:32,557 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7008106233/jobReport.json
[2026-02-10 22:56:22] 2026-02-11 03:55:32,559 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-02-10 22:56:22] 2026-02-11 03:55:32,559 | INFO     | this job has now completed (state=finished)
[2026-02-10 22:56:22] 2026-02-11 03:55:32,559 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-10 22:56:22] 2026-02-11 03:55:32,559 | INFO     | log transfer has been attempted: DONE
[2026-02-10 22:56:22] 2026-02-11 03:55:32,559 | INFO     | job 7008106233 has finished - writing final server update
[2026-02-10 22:56:22] 2026-02-11 03:55:32,559 | INFO     | total number of processed events: 400 (read)
[2026-02-10 22:56:22] 2026-02-11 03:55:32,574 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7008106233/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 22:56:22] 2026-02-11 03:55:32,574 | INFO     | extracted standard info from prmon json
[2026-02-10 22:56:22] 2026-02-11 03:55:32,574 | INFO     | extracted standard memory fields from prmon json
[2026-02-10 22:56:22] 2026-02-11 03:55:32,574 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-10 22:56:22] 2026-02-11 03:55:32,575 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-10 22:56:22] 2026-02-11 03:55:32,575 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-10 22:56:22] 2026-02-11 03:55:32,576 | INFO     | fitting pss+swap vs Time
[2026-02-10 22:56:22] 2026-02-11 03:55:32,576 | INFO     | sum of square deviations: 635115655.8740162
[2026-02-10 22:56:22] 2026-02-11 03:55:32,577 | INFO     | sum of deviations: 9128134794.496063
[2026-02-10 22:56:22] 2026-02-11 03:55:32,577 | INFO     | mean x: 1770778238.031496
[2026-02-10 22:56:22] 2026-02-11 03:55:32,577 | INFO     | mean y: 2476953.125984252
[2026-02-10 22:56:22] 2026-02-11 03:55:32,577 | INFO     | intersect: -25447852130.114346
[2026-02-10 22:56:22] 2026-02-11 03:55:32,577 | INFO     | chi2: 1.3814991863640147
[2026-02-10 22:56:22] 2026-02-11 03:55:32,577 | INFO     | sum of square deviations: 563013198.3688517
[2026-02-10 22:56:22] 2026-02-11 03:55:32,577 | INFO     | sum of deviations: 13059746078.967243
[2026-02-10 22:56:22] 2026-02-11 03:55:32,578 | INFO     | mean x: 1770778085.5327868
[2026-02-10 22:56:22] 2026-02-11 03:55:32,578 | INFO     | mean y: 2484974.5081967213
[2026-02-10 22:56:22] 2026-02-11 03:55:32,578 | INFO     | intersect: -41072772632.69848
[2026-02-10 22:56:22] 2026-02-11 03:55:32,578 | INFO     | chi2: 1.1762444240302246
[2026-02-10 22:56:22] 2026-02-11 03:55:32,578 | INFO     | current chi2=1.1762444240302246 (change=14.857392922105353 %)
[2026-02-10 22:56:22] 2026-02-11 03:55:32,578 | INFO     | right removable region: 121
[2026-02-10 22:56:22] 2026-02-11 03:55:32,578 | INFO     | sum of square deviations: 563010758.3688517
[2026-02-10 22:56:22] 2026-02-11 03:55:32,578 | INFO     | sum of deviations: -6159645428.081968
[2026-02-10 22:56:22] 2026-02-11 03:55:32,578 | INFO     | mean x: 1770778390.5327868
[2026-02-10 22:56:22] 2026-02-11 03:55:32,578 | INFO     | mean y: 2508610.770491803
[2026-02-10 22:56:22] 2026-02-11 03:55:32,578 | INFO     | intersect: 19375792078.731792
[2026-02-10 22:56:22] 2026-02-11 03:55:32,578 | INFO     | chi2: 0.21397920050976382
[2026-02-10 22:56:22] 2026-02-11 03:55:32,579 | INFO     | current chi2=0.21397920050976382 (change=84.51108747498155 %)
[2026-02-10 22:56:22] 2026-02-11 03:55:32,579 | INFO     | sum of square deviations: 496595145.9658112
[2026-02-10 22:56:22] 2026-02-11 03:55:32,579 | INFO     | sum of deviations: -6155847786.444445
[2026-02-10 22:56:22] 2026-02-11 03:55:32,579 | INFO     | mean x: 1770778543.0170941
[2026-02-10 22:56:22] 2026-02-11 03:55:32,579 | INFO     | mean y: 2508592.222222222
[2026-02-10 22:56:22] 2026-02-11 03:55:32,579 | INFO     | intersect: 21953273239.98132
[2026-02-10 22:56:22] 2026-02-11 03:55:32,579 | INFO     | chi2: 0.21306398023137532
[2026-02-10 22:56:22] 2026-02-11 03:55:32,579 | INFO     | current chi2=0.21306398023137532 (change=0.4277145985255421 %)
[2026-02-10 22:56:22] 2026-02-11 03:55:32,579 | INFO     | left removable region: 20
[2026-02-10 22:56:22] 2026-02-11 03:55:32,579 | INFO     | sum of square deviations: 319445289.96039516
[2026-02-10 22:56:22] 2026-02-11 03:55:32,580 | INFO     | sum of deviations: -1230818856.5940595
[2026-02-10 22:56:22] 2026-02-11 03:55:32,580 | INFO     | mean x: 1770778665.019802
[2026-02-10 22:56:22] 2026-02-11 03:55:32,580 | INFO     | mean y: 2516669.297029703
[2026-02-10 22:56:22] 2026-02-11 03:55:32,580 | INFO     | intersect: 6825305548.203471
[2026-02-10 22:56:22] 2026-02-11 03:55:32,580 | INFO     | chi2: 0.0037035173124546207
[2026-02-10 22:56:22] 2026-02-11 03:55:32,580 | INFO     | current memory leak: -3.85 B/s (using 101 data points, chi2=0.00)
[2026-02-10 22:56:22] 2026-02-11 03:55:32,580 | INFO     | could have reported an average CPU frequency of 3799 MHz (8 samples)
[2026-02-10 22:56:22] 2026-02-11 03:55:32,580 | INFO     | ..............................
[2026-02-10 22:56:22] 2026-02-11 03:55:32,580 | INFO     | . Timing measurements:
[2026-02-10 22:56:22] 2026-02-11 03:55:32,580 | INFO     | . get job = 0 s
[2026-02-10 22:56:22] 2026-02-11 03:55:32,581 | INFO     | . initial setup = 1 s
[2026-02-10 22:56:22] 2026-02-11 03:55:32,581 | INFO     | . payload setup = 10 s
[2026-02-10 22:56:22] 2026-02-11 03:55:32,581 | INFO     | . stage-in = 0 s
[2026-02-10 22:56:22] 2026-02-11 03:55:32,581 | INFO     | . payload execution = 7739 s
[2026-02-10 22:56:22] 2026-02-11 03:55:32,581 | INFO     | . stage-out = 2 s
[2026-02-10 22:56:22] 2026-02-11 03:55:32,581 | INFO     | . log creation = 0 s
[2026-02-10 22:56:22] 2026-02-11 03:55:32,581 | INFO     | ..............................
[2026-02-10 22:56:22] 2026-02-11 03:55:32,705 | INFO     | 
[2026-02-10 22:56:22] 2026-02-11 03:55:32,706 | INFO     | job summary report
[2026-02-10 22:56:22] 2026-02-11 03:55:32,706 | INFO     | --------------------------------------------------
[2026-02-10 22:56:22] 2026-02-11 03:55:32,706 | INFO     | PanDA job id: 7008106233
[2026-02-10 22:56:22] 2026-02-11 03:55:32,706 | INFO     | task id: 48318010
[2026-02-10 22:56:22] 2026-02-11 03:55:32,706 | INFO     | errors: (none)
[2026-02-10 22:56:22] 2026-02-11 03:55:32,706 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-10 22:56:22] 2026-02-11 03:55:32,706 | INFO     | pilot state: finished 
[2026-02-10 22:56:22] 2026-02-11 03:55:32,706 | INFO     | transexitcode: 0
[2026-02-10 22:56:22] 2026-02-11 03:55:32,706 | INFO     | exeerrorcode: 0
[2026-02-10 22:56:22] 2026-02-11 03:55:32,706 | INFO     | exeerrordiag: 
[2026-02-10 22:56:22] 2026-02-11 03:55:32,706 | INFO     | exitcode: 0
[2026-02-10 22:56:22] 2026-02-11 03:55:32,706 | INFO     | exitmsg: OK
[2026-02-10 22:56:22] 2026-02-11 03:55:32,706 | INFO     | cpuconsumptiontime: 22224 s
[2026-02-10 22:56:22] 2026-02-11 03:55:32,706 | INFO     | nevents: 400
[2026-02-10 22:56:22] 2026-02-11 03:55:32,706 | INFO     | neventsw: 0
[2026-02-10 22:56:22] 2026-02-11 03:55:32,706 | INFO     | pid: 953022
[2026-02-10 22:56:22] 2026-02-11 03:55:32,707 | INFO     | pgrp: 953022
[2026-02-10 22:56:22] 2026-02-11 03:55:32,707 | INFO     | corecount: 8
[2026-02-10 22:56:22] 2026-02-11 03:55:32,707 | INFO     | event service: False
[2026-02-10 22:56:22] 2026-02-11 03:55:32,707 | INFO     | sizes: {0: 2282223, 11: 2282223, 7754: 2309927, 7758: 2318925, 7759: 2318981, 7761: 2319175}
[2026-02-10 22:56:22] 2026-02-11 03:55:32,707 | INFO     | --------------------------------------------------
[2026-02-10 22:56:22] 2026-02-11 03:55:32,707 | INFO     | 
[2026-02-10 22:56:22] 2026-02-11 03:55:32,707 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-02-10 22:56:22] 2026-02-11 03:55:32,747 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-10 22:56:22] 2026-02-11 03:55:32,747 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-10 22:56:22] 2026-02-11 03:55:32,747 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-10 22:56:22] 2026-02-11 03:55:32,747 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-10 22:56:22] 2026-02-11 03:55:32,747 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-10 22:56:22] 2026-02-11 03:55:32,747 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-10 22:56:22] 2026-02-11 03:55:32,747 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-10 22:56:22] 2026-02-11 03:55:32,747 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-10 22:56:22] 2026-02-11 03:55:32,747 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-10 22:56:22] 2026-02-11 03:55:32,747 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-10 22:56:22] 2026-02-11 03:55:32,747 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-10 22:56:22] 2026-02-11 03:55:32,747 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-10 22:56:22] 2026-02-11 03:55:32,747 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-10 22:56:22] 2026-02-11 03:55:32,747 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-10 22:56:22] 2026-02-11 03:55:32,747 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-10 22:56:22] 2026-02-11 03:55:32,747 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-10 22:56:22] 2026-02-11 03:55:32,748 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-10 22:56:22] 2026-02-11 03:55:32,748 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-10 22:56:22] 2026-02-11 03:55:32,748 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-10 22:56:22] 2026-02-11 03:55:32,748 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-10 22:56:22] 2026-02-11 03:55:32,748 | INFO     | job 7008106233 has completed (purged errors)
[2026-02-10 22:56:22] 2026-02-11 03:55:32,748 | INFO     | overall cleanup function is called
[2026-02-10 22:56:22] 2026-02-11 03:55:33,759 | INFO     | --- collectZombieJob: --- 10, [953022]
[2026-02-10 22:56:22] 2026-02-11 03:55:33,759 | INFO     | zombie collector waiting for pid 953022
[2026-02-10 22:56:22] 2026-02-11 03:55:33,760 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-10 22:56:22] 2026-02-11 03:55:33,760 | INFO     | collected zombie processes
[2026-02-10 22:56:22] 2026-02-11 03:55:33,760 | INFO     | will attempt to kill all subprocesses of pid=953022
[2026-02-10 22:56:22] 2026-02-11 03:55:34,511 | INFO     | process IDs to be killed: [953022] (in reverse order)
[2026-02-10 22:56:22] 2026-02-11 03:55:34,688 | WARNING  | found no corresponding commands to process id(s)
[2026-02-10 22:56:22] 2026-02-11 03:55:34,688 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-10 22:56:22] 2026-02-11 03:55:34,713 | INFO     | did not find any defunct processes belonging to 953022
[2026-02-10 22:56:22] 2026-02-11 03:55:34,735 | INFO     | did not find any defunct processes belonging to 953022
[2026-02-10 22:56:22] 2026-02-11 03:55:34,736 | INFO     | ready for new job
[2026-02-10 22:56:22] 2026-02-11 03:55:34,736 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-10 22:56:22] 2026-02-11 03:55:34,737 | INFO     | **************************************
[2026-02-10 22:56:22] 2026-02-11 03:55:34,737 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-10 22:56:22] 2026-02-11 03:55:34,737 | INFO     | **************************************
[2026-02-10 22:56:22] 2026-02-11 03:55:34,737 | INFO     | 
[2026-02-10 22:56:22] 2026-02-11 03:55:34,742 | INFO     | architecture information:
[2026-02-10 22:56:22] 2026-02-11 03:55:34,742 | INFO     | executing command: cat /etc/os-release
[2026-02-10 22:56:22] 2026-02-11 03:55:34,777 | INFO     | cat /etc/os-release:
[2026-02-10 22:56:22] NAME="CentOS Linux"
[2026-02-10 22:56:22] VERSION="7 (Core)"
[2026-02-10 22:56:22] ID="centos"
[2026-02-10 22:56:22] ID_LIKE="rhel fedora"
[2026-02-10 22:56:22] VERSION_ID="7"
[2026-02-10 22:56:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-10 22:56:22] ANSI_COLOR="0;31"
[2026-02-10 22:56:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-10 22:56:22] HOME_URL="https://www.centos.org/"
[2026-02-10 22:56:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-10 22:56:22] 
[2026-02-10 22:56:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-10 22:56:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-10 22:56:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-10 22:56:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-10 22:56:22] 
[2026-02-10 22:56:22] 2026-02-11 03:55:34,777 | INFO     | **************************************
[2026-02-10 22:56:22] 2026-02-11 03:55:35,281 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-02-10 22:56:22] 2026-02-11 03:55:35,318 | INFO     | sufficient remaining disk space (163169959936 B)
[2026-02-10 22:56:22] 2026-02-11 03:55:35,319 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-10 22:56:22] 2026-02-11 03:55:35,319 | INFO     | current server update state: UPDATING_FINAL
[2026-02-10 22:56:22] 2026-02-11 03:55:35,319 | INFO     | update_server=False
[2026-02-10 22:56:22] 2026-02-11 03:55:35,319 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-10 22:56:22] 2026-02-11 03:55:35,319 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-10 22:56:22] 2026-02-11 03:55:35,319 | INFO     | aborting loop
[2026-02-10 22:56:22] 2026-02-11 03:55:35,323 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-10 22:56:22] 2026-02-11 03:55:36,076 | INFO     | all data control threads have been joined
[2026-02-10 22:56:22] 2026-02-11 03:55:36,324 | INFO     | [job] retrieve thread has finished
[2026-02-10 22:56:22] 2026-02-11 03:55:36,329 | INFO     | [job] job monitor thread has finished
[2026-02-10 22:56:22] 2026-02-11 03:55:36,387 | INFO     | all job control threads have been joined
[2026-02-10 22:56:22] 2026-02-11 03:55:36,419 | INFO     | [job] validate thread has finished
[2026-02-10 22:56:22] 2026-02-11 03:55:36,530 | INFO     | [payload] validate_post thread has finished
[2026-02-10 22:56:22] 2026-02-11 03:55:36,642 | INFO     | [data] copytool_in thread has finished
[2026-02-10 22:56:22] 2026-02-11 03:55:36,748 | INFO     | all payload control threads have been joined
[2026-02-10 22:56:22] 2026-02-11 03:55:36,814 | INFO     | [payload] failed_post thread has finished
[2026-02-10 22:56:22] 2026-02-11 03:55:37,000 | INFO     | [payload] validate_pre thread has finished
[2026-02-10 22:56:22] 2026-02-11 03:55:37,081 | INFO     | [data] control thread has finished
[2026-02-10 22:56:22] 2026-02-11 03:55:37,157 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-10 22:56:22] 2026-02-11 03:55:37,330 | INFO     | [data] copytool_out thread has finished
[2026-02-10 22:56:22] 2026-02-11 03:55:37,393 | INFO     | [job] control thread has finished
[2026-02-10 22:56:22] 2026-02-11 03:55:37,413 | INFO     | [payload] execute_payloads thread has finished
[2026-02-10 22:56:22] 2026-02-11 03:55:37,688 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-10 22:56:22] 2026-02-11 03:55:37,710 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-10 22:56:22] 2026-02-11 03:55:37,753 | INFO     | [payload] control thread has finished
[2026-02-10 22:56:22] 2026-02-11 03:55:37,778 | INFO     | [job] create_data_payload thread has finished
[2026-02-10 22:56:22] 2026-02-11 03:55:38,716 | INFO     | [job] queue monitor thread has finished
[2026-02-10 22:56:22] 2026-02-11 03:55:41,172 | INFO     | [data] queue_monitor thread has finished
[2026-02-10 22:56:22] 2026-02-11 03:56:06,873 | INFO     | PID=935314 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-10 22:56:22] 2026-02-11 03:56:06,873 | INFO     | .. there are 41 such processes running
[2026-02-10 22:56:22] 2026-02-11 03:56:06,886 | INFO     | found 0 job(s) in 20 queues
[2026-02-10 22:56:22] 2026-02-11 03:56:06,886 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-10 22:56:22] 2026-02-11 03:56:06,886 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-10 22:56:22] 2026-02-11 03:56:13,682 | INFO     | [monitor] cgroup control has ended
[2026-02-10 22:56:22] 2026-02-11 03:56:15,451 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140279215650624)>', '<ExcThread(monitor, started 140278849591040)>']
[2026-02-10 22:56:22] 2026-02-11 03:56:15,940 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-10 22:56:22] 2026-02-11 03:56:15,940 | INFO     | [monitor] control thread has ended
[2026-02-10 22:56:22] 2026-02-11 03:56:20,477 | INFO     | all workflow threads have been joined
[2026-02-10 22:56:22] 2026-02-11 03:56:20,487 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-10 22:56:22] 2026-02-11 03:56:20,487 | INFO     | traces error code: 0
[2026-02-10 22:56:22] 2026-02-11 03:56:20,487 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-10 22:56:22] 2026-02-11 03:56:20,755 [wrapper] ==== pilot stdout END ====
[2026-02-10 22:56:22] 2026-02-11 03:56:20,777 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-10 22:56:22] 2026-02-11 03:56:20,808 [wrapper] pilotpid: 935314
[2026-02-10 22:56:22] 2026-02-11 03:56:20,839 [wrapper] Pilot exit status: 0
[2026-02-10 22:56:22] 2026-02-11 03:56:20,959 [wrapper] pandaids: 7008106233 7008106233
[2026-02-10 22:56:22] 2026-02-11 03:56:21,299 [wrapper] cleanup supervisor_pilot 1676656 935315
[2026-02-10 22:56:22] 2026-02-11 03:56:21,337 [wrapper] Test setup, not cleaning
[2026-02-10 22:56:22] 2026-02-11 03:56:21,367 [wrapper] apfmon messages muted
[2026-02-10 22:56:22] 2026-02-11 03:56:21,394 [wrapper] ==== wrapper stdout END ====
[2026-02-10 22:56:22] 2026-02-11 03:56:21,410 [wrapper] ==== wrapper stderr END ====
[2026-02-10 22:56:22]  *** Error codes and diagnostics ***
[2026-02-10 22:56:22]     "exeErrorCode": 0,
[2026-02-10 22:56:22]     "exeErrorDiag": "",
[2026-02-10 22:56:22]     "pilotErrorCode": 0,
[2026-02-10 22:56:22]     "pilotErrorDiag": "",
[2026-02-10 22:56:22]  *** Listing of results directory ***
[2026-02-10 22:56:22] total 1148928
[2026-02-10 22:56:22] drwx------. 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-02-10 22:56:22] -rw-r--r--. 1 boincer umatlas    584627 Feb 10 14:02 pilot3.tar.gz
[2026-02-10 22:56:22] -rwx------. 1 boincer umatlas     36322 Feb 10 14:04 runpilot2-wrapper.sh
[2026-02-10 22:56:22] -rw-r--r--. 1 boincer umatlas      5111 Feb 10 14:04 queuedata.json
[2026-02-10 22:56:22] -rw-r--r--. 1 boincer umatlas       100 Feb 10 19:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-10 22:56:22] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 10 19:31 run_atlas
[2026-02-10 22:56:22] -rw-r--r--. 1 boincer umatlas       105 Feb 10 19:31 job.xml
[2026-02-10 22:56:22] -rw-r--r--. 3 boincer umatlas 494854514 Feb 10 19:31 EVNT.48318008._000330.pool.root.1
[2026-02-10 22:56:22] -rw-r--r--. 3 boincer umatlas 494854514 Feb 10 19:31 ATLAS.root_0
[2026-02-10 22:56:22] -rw-r--r--. 2 boincer umatlas     15845 Feb 10 19:31 start_atlas.sh
[2026-02-10 22:56:22] drwxrwx--x. 2 boincer umatlas      4096 Feb 10 19:31 shared
[2026-02-10 22:56:22] -rw-r--r--. 2 boincer umatlas    597944 Feb 10 19:31 input.tar.gz
[2026-02-10 22:56:22] -rw-r--r--. 1 boincer umatlas         0 Feb 10 19:31 boinc_lockfile
[2026-02-10 22:56:22] -rw-r--r--. 1 boincer umatlas      2527 Feb 10 20:45 pandaJob.out
[2026-02-10 22:56:22] -rw-------. 1 boincer umatlas        57 Feb 10 20:45 setup.sh.local
[2026-02-10 22:56:22] -rw-------. 1 boincer umatlas   1009649 Feb 10 20:45 agis_schedconf.cvmfs.json
[2026-02-10 22:56:22] -rw-------. 1 boincer umatlas       432 Feb 10 20:45 workernode_map.json
[2026-02-10 22:56:22] -rw-r--r--. 1 boincer umatlas      7185 Feb 10 22:46 init_data.xml
[2026-02-10 22:56:22] -rw-------. 1 boincer umatlas 180042483 Feb 10 22:54 HITS.48318010._018047.pool.root.1
[2026-02-10 22:56:22] -rw-r--r--. 1 boincer umatlas       531 Feb 10 22:54 boinc_task_state.xml
[2026-02-10 22:56:22] -rw-------. 1 boincer umatlas      1046 Feb 10 22:55 memory_monitor_summary.json
[2026-02-10 22:56:22] -rw-------. 1 boincer umatlas   1512955 Feb 10 22:55 agis_ddmendpoints.agis.ALL.json
[2026-02-10 22:56:22] -rw-------. 1 boincer umatlas    369426 Feb 10 22:55 log.48318010._018047.job.log.tgz.1
[2026-02-10 22:56:22] -rw-------. 1 boincer umatlas      6353 Feb 10 22:55 heartbeat.json
[2026-02-10 22:56:22] -rw-------. 1 boincer umatlas        96 Feb 10 22:56 pilot_heartbeat.json
[2026-02-10 22:56:22] -rw-------. 1 boincer umatlas      4820 Feb 10 22:56 pilotlog.txt
[2026-02-10 22:56:22] -rw-r--r--. 1 boincer umatlas        28 Feb 10 22:56 wrapper_checkpoint.txt
[2026-02-10 22:56:22] -rw-r--r--. 1 boincer umatlas      8192 Feb 10 22:56 boinc_mmap_file
[2026-02-10 22:56:22] -rw-------. 1 boincer umatlas   1029899 Feb 10 22:56 log.48318010._018047.job.log.1
[2026-02-10 22:56:22] -rw-------. 1 boincer umatlas       357 Feb 10 22:56 output.list
[2026-02-10 22:56:22] -rw-r--r--. 1 boincer umatlas       620 Feb 10 22:56 runtime_log
[2026-02-10 22:56:22] -rw-------. 1 boincer umatlas   1413120 Feb 10 22:56 result.tar.gz
[2026-02-10 22:56:22] -rw-r--r--. 1 boincer umatlas      9426 Feb 10 22:56 runtime_log.err
[2026-02-10 22:56:22] -rw-------. 1 boincer umatlas       782 Feb 10 22:56 0t8LDmzC898n9Rq4apOajLDm4fhM0noT9bVooX4SDmuwhKDm5PVj8n.diag
[2026-02-10 22:56:22] -rw-r--r--. 1 boincer umatlas     23601 Feb 10 22:56 stderr.txt
[2026-02-10 22:56:22] HITS file was successfully produced:
[2026-02-10 22:56:22] -rw-------. 1 boincer umatlas 180042483 Feb 10 22:54 shared/HITS.pool.root.1
[2026-02-10 22:56:22]  *** Contents of shared directory: ***
[2026-02-10 22:56:22] total 661072
[2026-02-10 22:56:22] -rw-r--r--. 3 boincer umatlas 494854514 Feb 10 19:31 ATLAS.root_0
[2026-02-10 22:56:22] -rw-r--r--. 2 boincer umatlas     15845 Feb 10 19:31 start_atlas.sh
[2026-02-10 22:56:22] -rw-r--r--. 2 boincer umatlas    597944 Feb 10 19:31 input.tar.gz
[2026-02-10 22:56:22] -rw-------. 1 boincer umatlas 180042483 Feb 10 22:54 HITS.pool.root.1
[2026-02-10 22:56:22] -rw-------. 1 boincer umatlas   1413120 Feb 10 22:56 result.tar.gz
22:56:24 (909367): run_atlas exited; CPU time 22498.324374
22:56:24 (909367): called boinc_finish(0)

</stderr_txt>
]]>

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