Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:19:53 (1069473): wrapper (7.7.26015): starting
18:19:53 (1069473): wrapper: running run_atlas (--nthreads 12)
[2026-02-10 18:19:53] Arguments: --nthreads 12
[2026-02-10 18:19:53] Threads: 12
[2026-02-10 18:19:53] Checking for CVMFS
[2026-02-10 18:19:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 18:19:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 18:19:54] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 18:19:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 18:19:54] 2.11.5.0 3459277 103463 252104 156098 3 231 29293792 45568000 23540 130560 0 893869318 99.801 555164364 19833 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-10 18:19:54] CVMFS is ok
[2026-02-10 18:19:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-10 18:19:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-10 18:19:54] Further information can be found at the LHC@home message board.
[2026-02-10 18:19:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 18:19:54] Checking for apptainer binary...
[2026-02-10 18:19:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 18:19:54] Running /usr/bin/apptainer --version
[2026-02-10 18:19:54] apptainer version 1.4.1-1.el9
[2026-02-10 18:19:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 18:19:55] wns0066.triumf.lcg
[2026-02-10 18:19:55] apptainer works
[2026-02-10 18:19:55] Set ATHENA_PROC_NUMBER=12
[2026-02-10 18:19:55] Set ATHENA_CORE_NUMBER=12
[2026-02-10 18:19:55] Starting ATLAS job with PandaID=7008106513
[2026-02-10 18:19:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-10 18:23:48]  *** The last 200 lines of the pilot log: ***
[2026-02-10 18:23:49] 2026-02-11 02:23:14,279 | WARNING  | wrong length of table data, x=[1770776455.0], y=[1801.0] (must be same and length>=4)
[2026-02-10 18:23:49] 2026-02-11 02:23:14,279 | INFO     | could have reported an average CPU frequency of 2718 MHz (4 samples)
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | ..............................
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | . Timing measurements:
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | . get job = 0 s
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | . initial setup = 13 s
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | . payload setup = 9 s
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | . stage-in = 0 s
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | . payload execution = 28 s
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | . stage-out = 0 s
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | . log creation = 0 s
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | ..............................
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7008106513/pilotlog.txt
[2026-02-10 18:23:49] 2026-02-11 02:23:14,358 | INFO     | monitor loop #54: job 0:7008106513 is in state 'failed'
[2026-02-10 18:23:49] 2026-02-11 02:23:14,358 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-02-10 18:23:49] 2026-02-11 02:23:14,377 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-10 18:23:49] - Log from pilotlog.txt -
[2026-02-10 18:23:49] 2026-02-11 02:23:14,258 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-10 18:23:49] 2026-02-11 02:23:14,258 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-10 18:23:49] 2026-02-11 02:23:14,259 | WARNING  | found no stored workdir sizes
[2026-02-10 18:23:49] 2026-02-11 02:23:14,279 | INFO     | will not add max space = 0 B to job metrics
[2026-02-10 18:23:49] 2026-02-11 02:23:14,279 | WARNING  | wrong length of table data, x=[1770776455.0], y=[1801.0] (must be same and length>=4)
[2026-02-10 18:23:49] 2026-02-11 02:23:14,279 | INFO     | could have reported an average CPU frequency of 2718 MHz (4 samples)
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | ..............................
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | . Timing measurements:
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | . get job = 0 s
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | . initial setup = 13 s
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | . payload setup = 9 s
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | . stage-in = 0 s
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | . payload execution = 28 s
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | . stage-out = 0 s
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | . log creation = 0 s
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | ..............................
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7008106513/pilotlog.txt
[2026-02-10 18:23:49] 2026-02-11 02:23:14,358 | INFO     | monitor loop #54: job 0:7008106513 is in state 'failed'
[2026-02-10 18:23:49] 2026-02-11 02:23:14,358 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-02-10 18:23:49] 2026-02-11 02:23:14,377 | WARNING  | 
[2026-02-10 18:23:49] [begin log extracts]
[2026-02-10 18:23:49] - Log from pilotlog.txt -
[2026-02-10 18:23:49] 2026-02-11 02:23:14,258 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-10 18:23:49] 2026-02-11 02:23:14,258 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-10 18:23:49] 2026-02-11 02:23:14,259 | WARNING  | found no stored workdir sizes
[2026-02-10 18:23:49] 2026-02-11 02:23:14,279 | INFO     | will not add max space = 0 B to job metrics
[2026-02-10 18:23:49] 2026-02-11 02:23:14,279 | WARNING  | wrong length of table data, x=[1770776455.0], y=[1801.0] (must be same and length>=4)
[2026-02-10 18:23:49] 2026-02-11 02:23:14,279 | INFO     | could have reported an average CPU frequency of 2718 MHz (4 samples)
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | ..............................
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | . Timing measurements:
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | . get job = 0 s
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | . initial setup = 13 s
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | . payload setup = 9 s
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | . stage-in = 0 s
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | . payload execution = 28 s
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | . stage-out = 0 s
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | . log creation = 0 s
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | ..............................
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-10 18:23:49] 2026-02-11 02:23:14,280 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7008106513/pilotlog.txt
[2026-02-10 18:23:49] 2026-02-11 02:23:14,358 | INFO     | monitor loop #54: job 0:7008106513 is in state 'failed'
[2026-02-10 18:23:49] 2026-02-11 02:23:14,358 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-02-10 18:23:49] [end log extracts]
[2026-02-10 18:23:49] 2026-02-11 02:23:14,377 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-10 18:23:49] 2026-02-11 02:23:14,378 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-10 18:23:49] 2026-02-11 02:23:14,572 | INFO     | 
[2026-02-10 18:23:49] 2026-02-11 02:23:14,572 | INFO     | job summary report
[2026-02-10 18:23:49] 2026-02-11 02:23:14,572 | INFO     | --------------------------------------------------
[2026-02-10 18:23:49] 2026-02-11 02:23:14,572 | INFO     | PanDA job id: 7008106513
[2026-02-10 18:23:49] 2026-02-11 02:23:14,572 | INFO     | task id: 48318034
[2026-02-10 18:23:49] 2026-02-11 02:23:14,572 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-10 18:21:10,784 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-10 18:23:49] 2026-02-11 02:23:14,572 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-10 18:23:49] 2026-02-11 02:23:14,572 | INFO     | pilot state: failed 
[2026-02-10 18:23:49] 2026-02-11 02:23:14,572 | INFO     | transexitcode: 65
[2026-02-10 18:23:49] 2026-02-11 02:23:14,572 | INFO     | exeerrorcode: 65
[2026-02-10 18:23:49] 2026-02-11 02:23:14,572 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-10 18:23:49] 2026-02-11 02:23:14,572 | INFO     | exitcode: 65
[2026-02-10 18:23:49] 2026-02-11 02:23:14,573 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-10 18:23:49] 2026-02-11 02:23:14,573 | INFO     | cpuconsumptiontime: 13 s
[2026-02-10 18:23:49] 2026-02-11 02:23:14,573 | INFO     | nevents: 0
[2026-02-10 18:23:49] 2026-02-11 02:23:14,573 | INFO     | neventsw: 0
[2026-02-10 18:23:49] 2026-02-11 02:23:14,573 | INFO     | pid: 1078023
[2026-02-10 18:23:49] 2026-02-11 02:23:14,573 | INFO     | pgrp: 1078023
[2026-02-10 18:23:49] 2026-02-11 02:23:14,573 | INFO     | corecount: 12
[2026-02-10 18:23:49] 2026-02-11 02:23:14,573 | INFO     | event service: False
[2026-02-10 18:23:49] 2026-02-11 02:23:14,573 | INFO     | sizes: {0: 2282182, 11: 2282182, 40: 2305323, 41: 2309643, 157: 2309781}
[2026-02-10 18:23:49] 2026-02-11 02:23:14,573 | INFO     | --------------------------------------------------
[2026-02-10 18:23:49] 2026-02-11 02:23:14,573 | INFO     | 
[2026-02-10 18:23:49] 2026-02-11 02:23:14,573 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-10 18:23:49] 2026-02-11 02:23:14,645 | INFO     | time since job start (168s) is within the limit (349056.0s)
[2026-02-10 18:23:49] 2026-02-11 02:23:14,687 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-10 18:23:49] 2026-02-11 02:23:14,688 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-10 18:23:49] 2026-02-11 02:23:14,699 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-10 18:23:49] 2026-02-11 02:23:14,699 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-10 18:23:49] 2026-02-11 02:23:14,699 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-10 18:23:49] 2026-02-11 02:23:14,699 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-10 18:23:49] 2026-02-11 02:23:14,699 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-10 18:23:49] 2026-02-11 02:23:14,699 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-10 18:23:49] 2026-02-11 02:23:14,699 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-10 18:23:49] 2026-02-11 02:23:14,699 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-10 18:23:49] 2026-02-11 02:23:14,699 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-10 18:23:49] 2026-02-11 02:23:14,699 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-10 18:23:49] 2026-02-11 02:23:14,699 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-10 18:23:49] 2026-02-11 02:23:14,699 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-10 18:23:49] 2026-02-11 02:23:14,700 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-10 18:23:49] 2026-02-11 02:23:14,700 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-10 18:23:49] 2026-02-11 02:23:14,700 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-10 18:23:49] 2026-02-11 02:23:14,700 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-10 18:23:49] 2026-02-11 02:23:14,700 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-10 18:23:49] 2026-02-11 02:23:14,700 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-10 18:23:49] 2026-02-11 02:23:14,700 | INFO     | job 7008106513 has completed (purged errors)
[2026-02-10 18:23:49] 2026-02-11 02:23:14,700 | INFO     | overall cleanup function is called
[2026-02-10 18:23:49] 2026-02-11 02:23:15,709 | INFO     | --- collectZombieJob: --- 10, [1078023]
[2026-02-10 18:23:49] 2026-02-11 02:23:15,709 | INFO     | zombie collector waiting for pid 1078023
[2026-02-10 18:23:49] 2026-02-11 02:23:15,709 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-10 18:23:49] 2026-02-11 02:23:15,709 | INFO     | collected zombie processes
[2026-02-10 18:23:49] 2026-02-11 02:23:15,709 | INFO     | will attempt to kill all subprocesses of pid=1078023
[2026-02-10 18:23:49] 2026-02-11 02:23:16,115 | INFO     | process IDs to be killed: [1078023] (in reverse order)
[2026-02-10 18:23:49] 2026-02-11 02:23:16,438 | WARNING  | found no corresponding commands to process id(s)
[2026-02-10 18:23:49] 2026-02-11 02:23:16,439 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-10 18:23:49] 2026-02-11 02:23:16,471 | INFO     | did not find any defunct processes belonging to 1078023
[2026-02-10 18:23:49] 2026-02-11 02:23:16,503 | INFO     | did not find any defunct processes belonging to 1078023
[2026-02-10 18:23:49] 2026-02-11 02:23:16,503 | INFO     | ready for new job
[2026-02-10 18:23:49] 2026-02-11 02:23:16,503 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-10 18:23:49] 2026-02-11 02:23:16,522 | INFO     | **************************************
[2026-02-10 18:23:49] 2026-02-11 02:23:16,522 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-10 18:23:49] 2026-02-11 02:23:16,522 | INFO     | **************************************
[2026-02-10 18:23:49] 2026-02-11 02:23:16,522 | INFO     | 
[2026-02-10 18:23:49] 2026-02-11 02:23:16,524 | INFO     | architecture information:
[2026-02-10 18:23:49] 2026-02-11 02:23:16,554 | INFO     | executing command: cat /etc/os-release
[2026-02-10 18:23:49] 2026-02-11 02:23:16,648 | INFO     | cat /etc/os-release:
[2026-02-10 18:23:49] NAME="CentOS Linux"
[2026-02-10 18:23:49] VERSION="7 (Core)"
[2026-02-10 18:23:49] ID="centos"
[2026-02-10 18:23:49] ID_LIKE="rhel fedora"
[2026-02-10 18:23:49] VERSION_ID="7"
[2026-02-10 18:23:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-10 18:23:49] ANSI_COLOR="0;31"
[2026-02-10 18:23:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-10 18:23:49] HOME_URL="https://www.centos.org/"
[2026-02-10 18:23:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-10 18:23:49] 
[2026-02-10 18:23:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-10 18:23:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-10 18:23:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-10 18:23:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-10 18:23:49] 
[2026-02-10 18:23:49] 2026-02-11 02:23:16,648 | INFO     | **************************************
[2026-02-10 18:23:49] 2026-02-11 02:23:17,152 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-10 18:23:49] 2026-02-11 02:23:17,206 | INFO     | sufficient remaining disk space (1890893955072 B)
[2026-02-10 18:23:49] 2026-02-11 02:23:17,206 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-10 18:23:49] 2026-02-11 02:23:17,207 | INFO     | current server update state: UPDATING_FINAL
[2026-02-10 18:23:49] 2026-02-11 02:23:17,207 | INFO     | update_server=False
[2026-02-10 18:23:49] 2026-02-11 02:23:17,207 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-10 18:23:49] 2026-02-11 02:23:17,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-10 18:23:49] 2026-02-11 02:23:17,674 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-10 18:23:49] 2026-02-11 02:23:17,765 | INFO     | all data control threads have been joined
[2026-02-10 18:23:49] 2026-02-11 02:23:17,884 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-10 18:23:49] 2026-02-11 02:23:17,884 | INFO     | aborting loop
[2026-02-10 18:23:49] 2026-02-11 02:23:18,085 | INFO     | all payload control threads have been joined
[2026-02-10 18:23:49] 2026-02-11 02:23:18,226 | INFO     | [job] retrieve thread has finished
[2026-02-10 18:23:49] 2026-02-11 02:23:18,251 | INFO     | [payload] execute_payloads thread has finished
[2026-02-10 18:23:49] 2026-02-11 02:23:18,263 | INFO     | [payload] failed_post thread has finished
[2026-02-10 18:23:49] 2026-02-11 02:23:18,628 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-10 18:23:49] 2026-02-11 02:23:18,771 | INFO     | [data] control thread has finished
[2026-02-10 18:23:49] 2026-02-11 02:23:18,775 | INFO     | all job control threads have been joined
[2026-02-10 18:23:49] 2026-02-11 02:23:18,889 | INFO     | [job] job monitor thread has finished
[2026-02-10 18:23:49] 2026-02-11 02:23:18,925 | INFO     | [payload] validate_post thread has finished
[2026-02-10 18:23:49] 2026-02-11 02:23:19,091 | INFO     | [payload] control thread has finished
[2026-02-10 18:23:49] 2026-02-11 02:23:19,215 | INFO     | [data] copytool_out thread has finished
[2026-02-10 18:23:49] 2026-02-11 02:23:19,355 | INFO     | [job] validate thread has finished
[2026-02-10 18:23:49] 2026-02-11 02:23:19,597 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-10 18:23:49] 2026-02-11 02:23:19,626 | INFO     | [job] create_data_payload thread has finished
[2026-02-10 18:23:49] 2026-02-11 02:23:19,626 | INFO     | [payload] validate_pre thread has finished
[2026-02-10 18:23:49] 2026-02-11 02:23:19,674 | INFO     | [data] copytool_in thread has finished
[2026-02-10 18:23:49] 2026-02-11 02:23:19,782 | INFO     | [job] control thread has finished
[2026-02-10 18:23:49] 2026-02-11 02:23:20,603 | INFO     | [job] queue monitor thread has finished
[2026-02-10 18:23:49] 2026-02-11 02:23:21,683 | INFO     | [data] queue_monitor thread has finished
[2026-02-10 18:23:49] 2026-02-11 02:23:26,168 | INFO     | [monitor] cgroup control has ended
[2026-02-10 18:23:49] 2026-02-11 02:23:27,646 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139742387291968)>', '<ExcThread(monitor, started 139741190158080)>']
[2026-02-10 18:23:49] 2026-02-11 02:23:32,672 | INFO     | all workflow threads have been joined
[2026-02-10 18:23:49] 2026-02-11 02:23:32,672 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-10 18:23:49] 2026-02-11 02:23:32,672 | INFO     | traces error code: 0
[2026-02-10 18:23:49] 2026-02-11 02:23:32,672 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-10 18:23:49] 2026-02-11 02:23:48,412 | INFO     | PID=1073254 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-10 18:23:49] 2026-02-11 02:23:48,412 | INFO     | .. there are 35 such processes running
[2026-02-10 18:23:49] 2026-02-11 02:23:48,413 | INFO     | found 0 job(s) in 20 queues
[2026-02-10 18:23:49] 2026-02-11 02:23:48,413 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-10 18:23:49] 2026-02-11 02:23:48,413 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-10 18:23:49] 2026-02-11 02:23:48,413 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-10 18:23:49] 2026-02-11 02:23:48,413 | INFO     | [monitor] control thread has ended
[2026-02-10 18:23:49] 2026-02-11 02:23:48,535 [wrapper] ==== pilot stdout END ====
[2026-02-10 18:23:49] 2026-02-11 02:23:48,537 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-10 18:23:49] 2026-02-11 02:23:48,539 [wrapper] pilotpid: 1073254
[2026-02-10 18:23:49] 2026-02-11 02:23:48,541 [wrapper] Pilot exit status: 0
[2026-02-10 18:23:49] 2026-02-11 02:23:48,593 [wrapper] pandaids: 7008106513
[2026-02-10 18:23:49] 2026-02-11 02:23:48,641 [wrapper] cleanup supervisor_pilot 1073260 1073255
[2026-02-10 18:23:49] 2026-02-11 02:23:48,643 [wrapper] Test setup, not cleaning
[2026-02-10 18:23:49] 2026-02-11 02:23:48,645 [wrapper] apfmon messages muted
[2026-02-10 18:23:49] 2026-02-11 02:23:48,646 [wrapper] ==== wrapper stdout END ====
[2026-02-10 18:23:49] 2026-02-11 02:23:48,648 [wrapper] ==== wrapper stderr END ====
[2026-02-10 18:23:49]  *** Error codes and diagnostics ***
[2026-02-10 18:23:49]     "exeErrorCode": 65,
[2026-02-10 18:23:49]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-10 18:23:49]     "pilotErrorCode": 1305,
[2026-02-10 18:23:49]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-10 18:23:49]  *** Listing of results directory ***
[2026-02-10 18:23:49] total 490488
[2026-02-10 18:23:49] -rw-r--r--. 1 boinc boinc    584627 Feb 10 13:52 pilot3.tar.gz
[2026-02-10 18:23:49] -rwx------. 1 boinc boinc     36322 Feb 10 13:53 runpilot2-wrapper.sh
[2026-02-10 18:23:49] -rw-r--r--. 1 boinc boinc      5111 Feb 10 13:55 queuedata.json
[2026-02-10 18:23:49] -rw-r--r--. 1 boinc boinc       100 Feb 10 18:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-10 18:23:49] -rwxr-xr-x. 1 boinc boinc      7986 Feb 10 18:19 run_atlas
[2026-02-10 18:23:49] -rw-r--r--. 1 boinc boinc       105 Feb 10 18:19 job.xml
[2026-02-10 18:23:49] -rw-r--r--. 1 boinc boinc      6594 Feb 10 18:19 init_data.xml
[2026-02-10 18:23:49] -rw-r--r--. 2 boinc boinc 498120733 Feb 10 18:19 EVNT.48318032._000276.pool.root.1
[2026-02-10 18:23:49] -rw-r--r--. 2 boinc boinc     15845 Feb 10 18:19 start_atlas.sh
[2026-02-10 18:23:49] drwxrwx--x. 2 boinc boinc      4096 Feb 10 18:19 shared
[2026-02-10 18:23:49] -rw-r--r--. 2 boinc boinc    597962 Feb 10 18:19 input.tar.gz
[2026-02-10 18:23:49] -rw-r--r--. 1 boinc boinc         0 Feb 10 18:19 boinc_lockfile
[2026-02-10 18:23:49] -rw-r--r--. 1 boinc boinc      2538 Feb 10 18:19 pandaJob.out
[2026-02-10 18:23:49] -rw-------. 1 boinc boinc   1009649 Feb 10 18:20 agis_schedconf.cvmfs.json
[2026-02-10 18:23:49] -rw-------. 1 boinc boinc   1512955 Feb 10 18:20 agis_ddmendpoints.agis.ALL.json
[2026-02-10 18:23:49] -rw-------. 1 boinc boinc       444 Feb 10 18:20 workernode_map.json
[2026-02-10 18:23:49] drwx------. 5 boinc boinc      4096 Feb 10 18:20 pilot3
[2026-02-10 18:23:49] -rw-r--r--. 1 boinc boinc       522 Feb 10 18:21 boinc_task_state.xml
[2026-02-10 18:23:49] -rw-------. 1 boinc boinc       952 Feb 10 18:21 memory_monitor_summary.json
[2026-02-10 18:23:49] -rw-------. 1 boinc boinc     20853 Feb 10 18:21 log.48318034._015537.job.log.tgz.1
[2026-02-10 18:23:49] -rw-------. 1 boinc boinc      6990 Feb 10 18:23 heartbeat.json
[2026-02-10 18:23:49] -rw-r--r--. 1 boinc boinc      8192 Feb 10 18:23 boinc_mmap_file
[2026-02-10 18:23:49] -rw-r--r--. 1 boinc boinc        22 Feb 10 18:23 wrapper_checkpoint.txt
[2026-02-10 18:23:49] -rw-------. 1 boinc boinc        95 Feb 10 18:23 pilot_heartbeat.json
[2026-02-10 18:23:49] -rw-------. 1 boinc boinc       823 Feb 10 18:23 pilotlog.txt
[2026-02-10 18:23:49] -rw-------. 1 boinc boinc     80971 Feb 10 18:23 log.48318034._015537.job.log.1
[2026-02-10 18:23:49] -rw-------. 1 boinc boinc       188 Feb 10 18:23 output.list
[2026-02-10 18:23:49] -rw-r--r--. 1 boinc boinc       620 Feb 10 18:23 runtime_log
[2026-02-10 18:23:49] -rw-------. 1 boinc boinc    122880 Feb 10 18:23 result.tar.gz
[2026-02-10 18:23:49] -rw-------. 1 boinc boinc       643 Feb 10 18:23 Z0jLDmCrAA9n9Rq4apOajLDm4fhM0noT9bVooX4SDmo9hKDmx0lgEm.diag
[2026-02-10 18:23:49] -rw-r--r--. 1 boinc boinc      8635 Feb 10 18:23 runtime_log.err
[2026-02-10 18:23:49] -rw-r--r--. 1 boinc boinc     21780 Feb 10 18:23 stderr.txt
[2026-02-10 18:23:49] No HITS result produced
[2026-02-10 18:23:49]  *** Contents of shared directory: ***
[2026-02-10 18:23:49] total 487172
[2026-02-10 18:23:49] -rw-r--r--. 2 boinc boinc 498120733 Feb 10 18:19 ATLAS.root_0
[2026-02-10 18:23:49] -rw-r--r--. 2 boinc boinc     15845 Feb 10 18:19 start_atlas.sh
[2026-02-10 18:23:49] -rw-r--r--. 2 boinc boinc    597962 Feb 10 18:19 input.tar.gz
[2026-02-10 18:23:49] -rw-------. 1 boinc boinc    122880 Feb 10 18:23 result.tar.gz
18:23:50 (1069473): run_atlas exited; CPU time 18.300562
18:23:50 (1069473): called boinc_finish(0)

</stderr_txt>
]]>

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