Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:21:46 (85596): wrapper (7.7.26015): starting
08:21:46 (85596): wrapper: running run_atlas (--nthreads 4)
[2026-02-11 08:21:46] Arguments: --nthreads 4
[2026-02-11 08:21:46] Threads: 4
[2026-02-11 08:21:46] Checking for CVMFS
[2026-02-11 08:21:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 08:21:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 08:21:46] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 08:21:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 08:21:46] 2.9.2.0 3074 440 70596 156108 1 177 30840618 36864000 0 130560 0 237708 99.988 17694 4852 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-11 08:21:46] CVMFS is ok
[2026-02-11 08:21:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-11 08:21:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-11 08:21:46] Further information can be found at the LHC@home message board.
[2026-02-11 08:21:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 08:21:46] Checking for apptainer binary...
[2026-02-11 08:21:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-11 08:21:46] Running /usr/bin/apptainer --version
[2026-02-11 08:21:46] apptainer version 1.4.1-1.1
[2026-02-11 08:21:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 08:21:46] thA373a
[2026-02-11 08:21:46] apptainer works
[2026-02-11 08:21:46] Set ATHENA_PROC_NUMBER=4
[2026-02-11 08:21:46] Set ATHENA_CORE_NUMBER=4
[2026-02-11 08:21:46] Starting ATLAS job with PandaID=7007871163
[2026-02-11 08:21:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-11 08:30:05]  *** The last 200 lines of the pilot log: ***
[2026-02-11 08:30:05] 2026-02-11 07:29:14,416 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-11 08:30:05] 2026-02-11 07:29:14,433 | INFO     | sufficient remaining disk space (325144543232 B)
[2026-02-11 08:30:05] 2026-02-11 07:29:14,433 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-11 08:30:05] 2026-02-11 07:29:14,433 | INFO     | current server update state: UPDATING_FINAL
[2026-02-11 08:30:05] 2026-02-11 07:29:14,433 | INFO     | update_server=False
[2026-02-11 08:30:05] 2026-02-11 07:29:14,433 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-11 08:30:05] 2026-02-11 07:29:14,434 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-11 08:30:05] 2026-02-11 07:29:14,434 | INFO     | found 0 job(s) in 20 queues
[2026-02-11 08:30:05] 2026-02-11 07:29:14,434 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-11 08:30:05] 2026-02-11 07:29:14,434 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-11 08:30:05] 2026-02-11 07:29:14,434 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-11 08:30:05] 2026-02-11 07:29:14,434 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-11 08:30:05] 2026-02-11 07:29:14,552 | INFO     | all payload control threads have been joined
[2026-02-11 08:30:05] 2026-02-11 07:29:14,890 | INFO     | all job control threads have been joined
[2026-02-11 08:30:05] 2026-02-11 07:29:15,037 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-11 08:30:05] 2026-02-11 07:29:15,075 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-11 08:30:05] 2026-02-11 07:29:15,076 | INFO     | aborting loop
[2026-02-11 08:30:05] 2026-02-11 07:29:15,156 | INFO     | all data control threads have been joined
[2026-02-11 08:30:05] 2026-02-11 07:29:15,439 | INFO     | [job] retrieve thread has finished
[2026-02-11 08:30:05] 2026-02-11 07:29:15,440 | INFO     | [job] queue monitor thread has finished
[2026-02-11 08:30:05] 2026-02-11 07:29:15,558 | INFO     | [payload] control thread has finished
[2026-02-11 08:30:05] 2026-02-11 07:29:15,621 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-11 08:30:05] 2026-02-11 07:29:15,895 | INFO     | [job] control thread has finished
[2026-02-11 08:30:05] 2026-02-11 07:29:16,000 | INFO     | [payload] execute_payloads thread has finished
[2026-02-11 08:30:05] 2026-02-11 07:29:16,081 | INFO     | [job] job monitor thread has finished
[2026-02-11 08:30:05] 2026-02-11 07:29:16,107 | INFO     | [payload] validate_post thread has finished
[2026-02-11 08:30:05] 2026-02-11 07:29:16,162 | INFO     | [data] control thread has finished
[2026-02-11 08:30:05] 2026-02-11 07:29:16,329 | INFO     | [job] validate thread has finished
[2026-02-11 08:30:05] 2026-02-11 07:29:16,416 | INFO     | [job] create_data_payload thread has finished
[2026-02-11 08:30:05] 2026-02-11 07:29:16,498 | INFO     | [payload] validate_pre thread has finished
[2026-02-11 08:30:05] 2026-02-11 07:29:16,620 | INFO     | [payload] failed_post thread has finished
[2026-02-11 08:30:05] 2026-02-11 07:29:16,631 | INFO     | [data] copytool_in thread has finished
[2026-02-11 08:30:05] 2026-02-11 07:29:17,043 | INFO     | [data] copytool_out thread has finished
[2026-02-11 08:30:05] 2026-02-11 07:29:18,441 | INFO     | [data] queue_monitor thread has finished
[2026-02-11 08:30:05] 2026-02-11 07:29:57,944 | INFO     | [monitor] cgroup control has ended
[2026-02-11 08:30:05] 2026-02-11 07:30:00,018 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140541721401152)>', '<ExcThread(monitor, started 140541211678464)>']
[2026-02-11 08:30:05] 2026-02-11 07:30:00,679 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-11 08:30:05] 2026-02-11 07:30:00,679 | INFO     | [monitor] control thread has ended
[2026-02-11 08:30:05] 2026-02-11 07:30:05,043 | INFO     | all workflow threads have been joined
[2026-02-11 08:30:05] 2026-02-11 07:30:05,044 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-11 08:30:05] 2026-02-11 07:30:05,044 | INFO     | traces error code: 0
[2026-02-11 08:30:05] 2026-02-11 07:30:05,044 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-11 08:30:05] 2026-02-11 07:30:05,120 [wrapper] ==== pilot stdout END ====
[2026-02-11 08:30:05] 2026-02-11 07:30:05,124 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-11 08:30:05] 2026-02-11 07:30:05,128 [wrapper] pilotpid: 89374
[2026-02-11 08:30:05] 2026-02-11 07:30:05,132 [wrapper] Pilot exit status: 0
[2026-02-11 08:30:05] 2026-02-11 07:30:05,144 [wrapper] pandaids: 7007871163
[2026-02-11 08:30:05] 2026-02-11 07:30:05,166 [wrapper] cleanup supervisor_pilot   89380 89375
[2026-02-11 08:30:05] 2026-02-11 07:30:05,170 [wrapper] Test setup, not cleaning
[2026-02-11 08:30:05] 2026-02-11 07:30:05,174 [wrapper] apfmon messages muted
[2026-02-11 08:30:05] 2026-02-11 07:30:05,178 [wrapper] ==== wrapper stdout END ====
[2026-02-11 08:30:05] 2026-02-11 07:30:05,181 [wrapper] ==== wrapper stderr END ====
[2026-02-11 08:30:05]  *** Error codes and diagnostics ***
[2026-02-11 08:30:05]     "exeErrorCode": 65,
[2026-02-11 08:30:05]     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout.\"; Possible memory leak: 'pss' slope: 8976.93 KB/s",
[2026-02-11 08:30:05]     "pilotErrorCode": 1305,
[2026-02-11 08:30:05]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout.\"; Possib",
[2026-02-11 08:30:05]  *** Listing of results directory ***
[2026-02-11 08:30:05] total 495552
[2026-02-11 08:30:05] -rw-r--r-- 1 boinc boinc    584627 Feb 10 15:43 pilot3.tar.gz
[2026-02-11 08:30:05] -rw-r--r-- 1 boinc boinc      5111 Feb 10 15:44 queuedata.json
[2026-02-11 08:30:05] -rwx------ 1 boinc boinc     36322 Feb 10 15:45 runpilot2-wrapper.sh
[2026-02-11 08:30:05] -rw-r--r-- 1 boinc boinc       100 Feb 11 08:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-11 08:30:05] -rwxr-xr-x 1 boinc boinc      7986 Feb 11 08:21 run_atlas
[2026-02-11 08:30:05] -rw-r--r-- 1 boinc boinc       105 Feb 11 08:21 job.xml
[2026-02-11 08:30:05] -rw-r--r-- 2 boinc boinc 503064881 Feb 11 08:21 EVNT.48318032._000097.pool.root.1
[2026-02-11 08:30:05] drwxrwx--x 2 boinc boinc      4096 Feb 11 08:21 shared
[2026-02-11 08:30:05] -rw-r--r-- 2 boinc boinc    597966 Feb 11 08:21 input.tar.gz
[2026-02-11 08:30:05] -rw-r--r-- 2 boinc boinc     15845 Feb 11 08:21 start_atlas.sh
[2026-02-11 08:30:05] -rw-r--r-- 1 boinc boinc         0 Feb 11 08:21 boinc_setup_complete
[2026-02-11 08:30:05] -rw-r--r-- 1 boinc boinc      6376 Feb 11 08:21 init_data.xml
[2026-02-11 08:30:05] -rw-r--r-- 1 boinc boinc         0 Feb 11 08:21 boinc_lockfile
[2026-02-11 08:30:05] -rw-r--r-- 1 boinc boinc      2532 Feb 11 08:21 pandaJob.out
[2026-02-11 08:30:05] -rw------- 1 boinc boinc   1009633 Feb 11 08:21 agis_schedconf.cvmfs.json
[2026-02-11 08:30:05] -rw------- 1 boinc boinc   1512955 Feb 11 08:21 agis_ddmendpoints.agis.ALL.json
[2026-02-11 08:30:05] -rw------- 1 boinc boinc       428 Feb 11 08:21 workernode_map.json
[2026-02-11 08:30:05] drwx------ 5 boinc boinc      4096 Feb 11 08:21 pilot3
[2026-02-11 08:30:05] -rw------- 1 boinc boinc      1000 Feb 11 08:27 memory_monitor_summary.json
[2026-02-11 08:30:05] -rw------- 1 boinc boinc    111787 Feb 11 08:27 log.48318034._014684.job.log.tgz.1
[2026-02-11 08:30:05] -rw-r--r-- 1 boinc boinc       527 Feb 11 08:27 boinc_task_state.xml
[2026-02-11 08:30:05] -rw------- 1 boinc boinc        95 Feb 11 08:28 pilot_heartbeat.json
[2026-02-11 08:30:05] -rw------- 1 boinc boinc      8092 Feb 11 08:29 heartbeat.json
[2026-02-11 08:30:05] -rw-r--r-- 1 boinc boinc        24 Feb 11 08:29 wrapper_checkpoint.txt
[2026-02-11 08:30:05] -rw-r--r-- 1 boinc boinc      8192 Feb 11 08:29 boinc_mmap_file
[2026-02-11 08:30:05] -rw------- 1 boinc boinc      4552 Feb 11 08:30 pilotlog.txt
[2026-02-11 08:30:05] -rw------- 1 boinc boinc    117264 Feb 11 08:30 log.48318034._014684.job.log.1
[2026-02-11 08:30:05] -rw------- 1 boinc boinc       188 Feb 11 08:30 output.list
[2026-02-11 08:30:05] -rw-r--r-- 1 boinc boinc       620 Feb 11 08:30 runtime_log
[2026-02-11 08:30:05] -rw------- 1 boinc boinc    245760 Feb 11 08:30 result.tar.gz
[2026-02-11 08:30:05] -rw-r--r-- 1 boinc boinc      8748 Feb 11 08:30 runtime_log.err
[2026-02-11 08:30:05] -rw------- 1 boinc boinc       651 Feb 11 08:30 5B9NDmLA498n9Rq4apOajLDm4fhM0noT9bVooX4SDmnchKDmqwkvkm.diag
[2026-02-11 08:30:05] -rw-r--r-- 1 boinc boinc      8266 Feb 11 08:30 stderr.txt
[2026-02-11 08:30:05] No HITS result produced
[2026-02-11 08:30:05]  *** Contents of shared directory: ***
[2026-02-11 08:30:05] total 492120
[2026-02-11 08:30:05] -rw-r--r-- 2 boinc boinc 503064881 Feb 11 08:21 ATLAS.root_0
[2026-02-11 08:30:05] -rw-r--r-- 2 boinc boinc    597966 Feb 11 08:21 input.tar.gz
[2026-02-11 08:30:05] -rw-r--r-- 2 boinc boinc     15845 Feb 11 08:21 start_atlas.sh
[2026-02-11 08:30:05] -rw------- 1 boinc boinc    245760 Feb 11 08:30 result.tar.gz
08:30:06 (85596): run_atlas exited; CPU time 164.297567
08:30:06 (85596): called boinc_finish(0)

</stderr_txt>
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