Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
01:50:37 (3836): wrapper (7.7.26015): starting
01:50:37 (3836): wrapper: running run_atlas (--nthreads 8)
[2026-02-11 01:50:37] Arguments: --nthreads 8
[2026-02-11 01:50:37] Threads: 8
[2026-02-11 01:50:37] Checking for CVMFS
[2026-02-11 01:50:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 01:50:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 01:50:37] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 01:50:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 01:50:37] 2.11.0.0 4295 175712 86312 156097 1 50 2757460 4096000 2751 130560 5 22706963 99.753 11860388 542 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-02-11 01:50:37] CVMFS is ok
[2026-02-11 01:50:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-11 01:50:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-11 01:50:37] Further information can be found at the LHC@home message board.
[2026-02-11 01:50:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 01:50:37] Checking for apptainer binary...
[2026-02-11 01:50:37] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-02-11 01:50:37] apptainer is not installed, using version from CVMFS
[2026-02-11 01:50:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 01:50:38] WARNING: Environment variable TMPDIR already has value [/tmp/job_11087154/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node346
[2026-02-11 01:50:38] apptainer works
[2026-02-11 01:50:38] Set ATHENA_PROC_NUMBER=8
[2026-02-11 01:50:38] Set ATHENA_CORE_NUMBER=8
[2026-02-11 01:50:38] Starting ATLAS job with PandaID=7007764407
[2026-02-11 01:50:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11087154/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-11 03:01:13]  *** The last 200 lines of the pilot log: ***
[2026-02-11 03:01:13]  is_tar=False
[2026-02-11 03:01:13]  lfn=log.48431113._009949.job.log.tgz.1
[2026-02-11 03:01:13]  mtime=0
[2026-02-11 03:01:13]  protocol_id=None
[2026-02-11 03:01:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-11 03:01:13]  replicas=None
[2026-02-11 03:01:13]  scope=mc23_13p6TeV
[2026-02-11 03:01:13]  status=None
[2026-02-11 03:01:13]  status_code=0
[2026-02-11 03:01:13]  storage_token=
[2026-02-11 03:01:13]  surl=/tmp/job_11087154/atlas/pilot/slots/0/PanDA_Pilot-7007764407/log.48431113._009949.job.log.tgz.1
[2026-02-11 03:01:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/d6/log.48431113._009949.job.log.tgz.1
[2026-02-11 03:01:13]  workdir=None
[2026-02-11 03:01:13] ]
[2026-02-11 03:01:13] 2026-02-11 02:00:36,988 | INFO     | transferring file log.48431113._009949.job.log.tgz.1 from /tmp/job_11087154/atlas/pilot/slots/0/PanDA_Pilot-7007764407/log.48431113._009949.job.log.tgz.1 to /tmp/j
[2026-02-11 03:01:13] 2026-02-11 02:00:36,988 | INFO     | executing command: /usr/bin/env mv /tmp/job_11087154/atlas/pilot/slots/0/PanDA_Pilot-7007764407/log.48431113._009949.job.log.tgz.1 /tmp/job_11087154/atlas/pilot/sl
[2026-02-11 03:01:13] 2026-02-11 02:00:36,996 | INFO     | adding to output.list: log.48431113._009949.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/d6/log.48431113._009949.job.log.tg
[2026-02-11 03:01:13] 2026-02-11 02:00:36,996 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-11 03:01:13] 2026-02-11 02:00:36,996 | INFO     | summary of transferred files:
[2026-02-11 03:01:13] 2026-02-11 02:00:36,996 | INFO     |  -- lfn=log.48431113._009949.job.log.tgz.1, status_code=0, status=transferred
[2026-02-11 03:01:13] 2026-02-11 02:00:36,996 | INFO     | stage-out finished correctly
[2026-02-11 03:01:13] 2026-02-11 02:00:37,297 | INFO     | PID=8636 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-11 03:01:13] 2026-02-11 02:00:38,171 | INFO     | monitor loop #321: job 0:7007764407 is in state 'finished'
[2026-02-11 03:01:13] 2026-02-11 02:00:38,171 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-11 03:01:13] 2026-02-11 02:00:38,298 | INFO     | time since job start (4193s) is within the limit (349056.0s)
[2026-02-11 03:01:13] 2026-02-11 02:00:40,303 | INFO     | time since job start (4195s) is within the limit (349056.0s)
[2026-02-11 03:01:13] 2026-02-11 02:00:40,380 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-11 03:01:13] 2026-02-11 02:00:40,673 | INFO     | monitor loop #322: job 0:7007764407 is in state 'finished'
[2026-02-11 03:01:13] 2026-02-11 02:00:40,674 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-11 03:01:13] 2026-02-11 02:00:41,103 | INFO     | job 7007764407 has state=finished
[2026-02-11 03:01:13] 2026-02-11 02:00:41,103 | INFO     | preparing for final server update for job 7007764407 in state='finished'
[2026-02-11 03:01:13] 2026-02-11 02:00:41,104 | INFO     | reading metadata from: /tmp/job_11087154/atlas/pilot/slots/0/PanDA_Pilot-7007764407/jobReport.json
[2026-02-11 03:01:13] 2026-02-11 02:00:41,105 | INFO     | added worker_node to metadata from /tmp/job_11087154/atlas/pilot/slots/0/workernode_map.json
[2026-02-11 03:01:13] 2026-02-11 02:00:41,105 | INFO     | this job has now completed (state=finished)
[2026-02-11 03:01:13] 2026-02-11 02:00:41,105 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-11 03:01:13] 2026-02-11 02:00:41,105 | INFO     | log transfer has been attempted: DONE
[2026-02-11 03:01:13] 2026-02-11 02:00:41,105 | INFO     | job 7007764407 has finished - writing final server update
[2026-02-11 03:01:13] 2026-02-11 02:00:41,105 | INFO     | total number of processed events: 400 (read)
[2026-02-11 03:01:13] 2026-02-11 02:00:41,123 | INFO     | using path: /tmp/job_11087154/atlas/pilot/slots/0/PanDA_Pilot-7007764407/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 03:01:13] 2026-02-11 02:00:41,123 | INFO     | extracted standard info from prmon json
[2026-02-11 03:01:13] 2026-02-11 02:00:41,123 | INFO     | extracted standard memory fields from prmon json
[2026-02-11 03:01:13] 2026-02-11 02:00:41,123 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-11 03:01:13] 2026-02-11 02:00:41,123 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-11 03:01:13] 2026-02-11 02:00:41,124 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-11 03:01:13] 2026-02-11 02:00:41,124 | INFO     | fitting pss+swap vs Time
[2026-02-11 03:01:13] 2026-02-11 02:00:41,124 | INFO     | sum of square deviations: 73882315.5
[2026-02-11 03:01:13] 2026-02-11 02:00:41,124 | INFO     | sum of deviations: -8972568019.0
[2026-02-11 03:01:13] 2026-02-11 02:00:41,125 | INFO     | mean x: 1770773226.5
[2026-02-11 03:01:13] 2026-02-11 02:00:41,125 | INFO     | mean y: 2755722.3870967743
[2026-02-11 03:01:13] 2026-02-11 02:00:41,125 | INFO     | intersect: 215052637598.31912
[2026-02-11 03:01:13] 2026-02-11 02:00:41,125 | INFO     | chi2: 0.10296554006934874
[2026-02-11 03:01:13] 2026-02-11 02:00:41,125 | INFO     | current memory leak: -121.44 B/s (using 62 data points, chi2=0.10)
[2026-02-11 03:01:13] 2026-02-11 02:00:41,125 | INFO     | could have reported an average CPU frequency of 2723 MHz (6 samples)
[2026-02-11 03:01:13] 2026-02-11 02:00:41,125 | INFO     | ..............................
[2026-02-11 03:01:13] 2026-02-11 02:00:41,125 | INFO     | . Timing measurements:
[2026-02-11 03:01:13] 2026-02-11 02:00:41,125 | INFO     | . get job = 0 s
[2026-02-11 03:01:13] 2026-02-11 02:00:41,125 | INFO     | . initial setup = 3 s
[2026-02-11 03:01:13] 2026-02-11 02:00:41,125 | INFO     | . payload setup = 2 s
[2026-02-11 03:01:13] 2026-02-11 02:00:41,125 | INFO     | . stage-in = 0 s
[2026-02-11 03:01:13] 2026-02-11 02:00:41,125 | INFO     | . payload execution = 4174 s
[2026-02-11 03:01:13] 2026-02-11 02:00:41,125 | INFO     | . stage-out = 0 s
[2026-02-11 03:01:13] 2026-02-11 02:00:41,125 | INFO     | . log creation = 0 s
[2026-02-11 03:01:13] 2026-02-11 02:00:41,125 | INFO     | ..............................
[2026-02-11 03:01:13] 2026-02-11 02:00:41,173 | INFO     | 
[2026-02-11 03:01:13] 2026-02-11 02:00:41,173 | INFO     | job summary report
[2026-02-11 03:01:13] 2026-02-11 02:00:41,173 | INFO     | --------------------------------------------------
[2026-02-11 03:01:13] 2026-02-11 02:00:41,174 | INFO     | PanDA job id: 7007764407
[2026-02-11 03:01:13] 2026-02-11 02:00:41,174 | INFO     | task id: 48431113
[2026-02-11 03:01:13] 2026-02-11 02:00:41,174 | INFO     | errors: (none)
[2026-02-11 03:01:13] 2026-02-11 02:00:41,174 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-11 03:01:13] 2026-02-11 02:00:41,174 | INFO     | pilot state: finished 
[2026-02-11 03:01:13] 2026-02-11 02:00:41,174 | INFO     | transexitcode: 0
[2026-02-11 03:01:13] 2026-02-11 02:00:41,174 | INFO     | exeerrorcode: 0
[2026-02-11 03:01:13] 2026-02-11 02:00:41,174 | INFO     | exeerrordiag: 
[2026-02-11 03:01:13] 2026-02-11 02:00:41,174 | INFO     | exitcode: 0
[2026-02-11 03:01:13] 2026-02-11 02:00:41,174 | INFO     | exitmsg: OK
[2026-02-11 03:01:13] 2026-02-11 02:00:41,174 | INFO     | cpuconsumptiontime: 27687 s
[2026-02-11 03:01:13] 2026-02-11 02:00:41,174 | INFO     | nevents: 400
[2026-02-11 03:01:13] 2026-02-11 02:00:41,174 | INFO     | neventsw: 0
[2026-02-11 03:01:13] 2026-02-11 02:00:41,174 | INFO     | pid: 14535
[2026-02-11 03:01:13] 2026-02-11 02:00:41,174 | INFO     | pgrp: 14535
[2026-02-11 03:01:13] 2026-02-11 02:00:41,174 | INFO     | corecount: 8
[2026-02-11 03:01:13] 2026-02-11 02:00:41,174 | INFO     | event service: False
[2026-02-11 03:01:13] 2026-02-11 02:00:41,174 | INFO     | sizes: {0: 2282372, 11: 2282372, 4180: 2308489, 4181: 2317517, 4184: 2317573, 4185: 2317767}
[2026-02-11 03:01:13] 2026-02-11 02:00:41,174 | INFO     | --------------------------------------------------
[2026-02-11 03:01:13] 2026-02-11 02:00:41,174 | INFO     | 
[2026-02-11 03:01:13] 2026-02-11 02:00:41,174 | INFO     | executing command: ls -lF /tmp/job_11087154/atlas/pilot/slots/0
[2026-02-11 03:01:13] 2026-02-11 02:00:41,183 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-11 03:01:13] 2026-02-11 02:00:41,183 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-11 03:01:13] 2026-02-11 02:00:41,183 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-11 03:01:13] 2026-02-11 02:00:41,183 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-11 03:01:13] 2026-02-11 02:00:41,183 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-11 03:01:13] 2026-02-11 02:00:41,183 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-11 03:01:13] 2026-02-11 02:00:41,183 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-11 03:01:13] 2026-02-11 02:00:41,183 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-11 03:01:13] 2026-02-11 02:00:41,183 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-11 03:01:13] 2026-02-11 02:00:41,183 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-11 03:01:13] 2026-02-11 02:00:41,183 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-11 03:01:13] 2026-02-11 02:00:41,183 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-11 03:01:13] 2026-02-11 02:00:41,183 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-11 03:01:13] 2026-02-11 02:00:41,183 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-11 03:01:13] 2026-02-11 02:00:41,184 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-11 03:01:13] 2026-02-11 02:00:41,184 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-11 03:01:13] 2026-02-11 02:00:41,184 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-11 03:01:13] 2026-02-11 02:00:41,184 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-11 03:01:13] 2026-02-11 02:00:41,184 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-11 03:01:13] 2026-02-11 02:00:41,184 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-11 03:01:13] 2026-02-11 02:00:41,184 | INFO     | job 7007764407 has completed (purged errors)
[2026-02-11 03:01:13] 2026-02-11 02:00:41,184 | INFO     | overall cleanup function is called
[2026-02-11 03:01:13] 2026-02-11 02:00:42,190 | INFO     | --- collectZombieJob: --- 10, [14535]
[2026-02-11 03:01:13] 2026-02-11 02:00:42,190 | INFO     | zombie collector waiting for pid 14535
[2026-02-11 03:01:13] 2026-02-11 02:00:42,190 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-11 03:01:13] 2026-02-11 02:00:42,190 | INFO     | collected zombie processes
[2026-02-11 03:01:13] 2026-02-11 02:00:42,190 | INFO     | will attempt to kill all subprocesses of pid=14535
[2026-02-11 03:01:13] 2026-02-11 02:00:42,279 | INFO     | process IDs to be killed: [14535] (in reverse order)
[2026-02-11 03:01:13] 2026-02-11 02:00:42,310 | WARNING  | found no corresponding commands to process id(s)
[2026-02-11 03:01:13] 2026-02-11 02:00:42,310 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-11 03:01:13] 2026-02-11 02:00:42,313 | INFO     | did not find any defunct processes belonging to 14535
[2026-02-11 03:01:13] 2026-02-11 02:00:42,316 | INFO     | did not find any defunct processes belonging to 14535
[2026-02-11 03:01:13] 2026-02-11 02:00:42,316 | INFO     | ready for new job
[2026-02-11 03:01:13] 2026-02-11 02:00:42,316 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-11 03:01:13] 2026-02-11 02:00:42,317 | INFO     | **************************************
[2026-02-11 03:01:13] 2026-02-11 02:00:42,317 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-11 03:01:13] 2026-02-11 02:00:42,317 | INFO     | **************************************
[2026-02-11 03:01:13] 2026-02-11 02:00:42,317 | INFO     | 
[2026-02-11 03:01:13] 2026-02-11 02:00:42,331 | INFO     | architecture information:
[2026-02-11 03:01:13] 2026-02-11 02:00:42,332 | INFO     | executing command: cat /etc/os-release
[2026-02-11 03:01:13] 2026-02-11 02:00:42,338 | INFO     | cat /etc/os-release:
[2026-02-11 03:01:13] NAME="CentOS Linux"
[2026-02-11 03:01:13] VERSION="7 (Core)"
[2026-02-11 03:01:13] ID="centos"
[2026-02-11 03:01:13] ID_LIKE="rhel fedora"
[2026-02-11 03:01:13] VERSION_ID="7"
[2026-02-11 03:01:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-11 03:01:13] ANSI_COLOR="0;31"
[2026-02-11 03:01:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-11 03:01:13] HOME_URL="https://www.centos.org/"
[2026-02-11 03:01:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-11 03:01:13] 
[2026-02-11 03:01:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-11 03:01:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-11 03:01:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-11 03:01:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-11 03:01:13] 
[2026-02-11 03:01:13] 2026-02-11 02:00:42,338 | INFO     | **************************************
[2026-02-11 03:01:13] 2026-02-11 02:00:42,841 | INFO     | executing command: df -mP /tmp/job_11087154/atlas/pilot/slots/0
[2026-02-11 03:01:13] 2026-02-11 02:00:42,848 | INFO     | sufficient remaining disk space (226868854784 B)
[2026-02-11 03:01:13] 2026-02-11 02:00:42,848 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-11 03:01:13] 2026-02-11 02:00:42,848 | INFO     | current server update state: UPDATING_FINAL
[2026-02-11 03:01:13] 2026-02-11 02:00:42,848 | INFO     | update_server=False
[2026-02-11 03:01:13] 2026-02-11 02:00:42,848 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-11 03:01:13] 2026-02-11 02:00:42,848 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-11 03:01:13] 2026-02-11 02:00:42,848 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-11 03:01:13] 2026-02-11 02:00:42,848 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-11 03:01:13] 2026-02-11 02:00:43,175 | INFO     | all payload control threads have been joined
[2026-02-11 03:01:13] 2026-02-11 02:00:43,176 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-11 03:01:13] 2026-02-11 02:00:43,176 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-11 03:01:13] 2026-02-11 02:00:43,176 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-11 03:01:13] 2026-02-11 02:00:43,176 | INFO     | will abort loop
[2026-02-11 03:01:13] 2026-02-11 02:00:43,270 | INFO     | all data control threads have been joined
[2026-02-11 03:01:13] 2026-02-11 02:00:43,577 | INFO     | all job control threads have been joined
[2026-02-11 03:01:13] 2026-02-11 02:00:43,853 | INFO     | [job] retrieve thread has finished
[2026-02-11 03:01:13] 2026-02-11 02:00:43,853 | INFO     | [job] queue monitor thread has finished
[2026-02-11 03:01:13] 2026-02-11 02:00:43,920 | INFO     | [payload] validate_post thread has finished
[2026-02-11 03:01:13] 2026-02-11 02:00:44,178 | INFO     | [payload] control thread has finished
[2026-02-11 03:01:13] 2026-02-11 02:00:44,181 | INFO     | [job] job monitor thread has finished
[2026-02-11 03:01:13] 2026-02-11 02:00:44,275 | INFO     | [data] control thread has finished
[2026-02-11 03:01:13] 2026-02-11 02:00:44,582 | INFO     | [job] control thread has finished
[2026-02-11 03:01:13] 2026-02-11 02:00:44,675 | INFO     | [payload] execute_payloads thread has finished
[2026-02-11 03:01:13] 2026-02-11 02:00:44,848 | INFO     | [payload] validate_pre thread has finished
[2026-02-11 03:01:13] 2026-02-11 02:00:44,854 | INFO     | [data] copytool_out thread has finished
[2026-02-11 03:01:13] 2026-02-11 02:00:44,968 | INFO     | [payload] failed_post thread has finished
[2026-02-11 03:01:13] 2026-02-11 02:00:45,099 | INFO     | [job] validate thread has finished
[2026-02-11 03:01:13] 2026-02-11 02:00:45,162 | INFO     | [data] copytool_in thread has finished
[2026-02-11 03:01:13] 2026-02-11 02:00:45,224 | INFO     | [job] create_data_payload thread has finished
[2026-02-11 03:01:13] 2026-02-11 02:00:46,853 | INFO     | [data] queue_monitor thread has finished
[2026-02-11 03:01:13] 2026-02-11 02:00:51,556 | INFO     | [monitor] cgroup control has ended
[2026-02-11 03:01:13] 2026-02-11 02:00:53,325 | INFO     | job.realtimelogging is not enabled
[2026-02-11 03:01:13] 2026-02-11 02:00:54,330 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-11 03:01:13] 2026-02-11 02:00:54,882 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065292032)>']
[2026-02-11 03:01:13] 2026-02-11 02:00:59,887 | INFO     | all workflow threads have been joined
[2026-02-11 03:01:13] 2026-02-11 02:00:59,887 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-11 03:01:13] 2026-02-11 02:00:59,887 | INFO     | traces error code: 0
[2026-02-11 03:01:13] 2026-02-11 02:00:59,887 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-11 03:01:13] 2026-02-11 02:01:13,483 | INFO     | PID=8636 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-11 03:01:13] 2026-02-11 02:01:13,483 | INFO     | found 0 job(s) in 20 queues
[2026-02-11 03:01:13] 2026-02-11 02:01:13,483 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-11 03:01:13] 2026-02-11 02:01:13,483 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-11 03:01:13] 2026-02-11 02:01:13,483 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-11 03:01:13] 2026-02-11 02:01:13,483 | INFO     | [monitor] control thread has ended
[2026-02-11 03:01:13] 2026-02-11 02:01:13,538 [wrapper] ==== pilot stdout END ====
[2026-02-11 03:01:13] 2026-02-11 02:01:13,539 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-11 03:01:13] 2026-02-11 02:01:13,540 [wrapper] pilotpid: 8636
[2026-02-11 03:01:13] 2026-02-11 02:01:13,542 [wrapper] Pilot exit status: 0
[2026-02-11 03:01:13] 2026-02-11 02:01:13,546 [wrapper] pandaids: 7007764407
[2026-02-11 03:01:13] 2026-02-11 02:01:13,567 [wrapper] cleanup supervisor_pilot  1614 8637
[2026-02-11 03:01:13] 2026-02-11 02:01:13,569 [wrapper] Test setup, not cleaning
[2026-02-11 03:01:13] 2026-02-11 02:01:13,570 [wrapper] apfmon messages muted
[2026-02-11 03:01:13] 2026-02-11 02:01:13,571 [wrapper] ==== wrapper stdout END ====
[2026-02-11 03:01:13] 2026-02-11 02:01:13,572 [wrapper] ==== wrapper stderr END ====
[2026-02-11 03:01:13]  *** Error codes and diagnostics ***
[2026-02-11 03:01:13]     "exeErrorCode": 0,
[2026-02-11 03:01:13]     "exeErrorDiag": "",
[2026-02-11 03:01:13]     "pilotErrorCode": 0,
[2026-02-11 03:01:13]     "pilotErrorDiag": "",
[2026-02-11 03:01:13]  *** Listing of results directory ***
[2026-02-11 03:01:13] total 893724
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user    584627 Feb 10 14:02 pilot3.tar.gz
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user      5111 Feb 10 14:03 queuedata.json
[2026-02-11 03:01:13] -rwx------ 1 mf493845 unix-user     36322 Feb 10 14:03 runpilot2-wrapper.sh
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user       100 Feb 10 23:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-11 03:01:13] -rwxr-xr-x 1 mf493845 unix-user      7986 Feb 10 23:36 run_atlas
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user       105 Feb 10 23:36 job.xml
[2026-02-11 03:01:13] -rw-r--r-- 2 mf493845 unix-user     15845 Feb 11 01:50 start_atlas.sh
[2026-02-11 03:01:13] drwxrwx--x 2 mf493845 unix-user       100 Feb 11 01:50 shared
[2026-02-11 03:01:13] -rw-r--r-- 2 mf493845 unix-user    597958 Feb 11 01:50 input.tar.gz
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user      6390 Feb 11 01:50 init_data.xml
[2026-02-11 03:01:13] -rw-r--r-- 2 mf493845 unix-user 649854540 Feb 11 01:50 EVNT.48431111._000194.pool.root.1
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user         0 Feb 11 01:50 boinc_setup_complete
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user      8192 Feb 11 01:50 boinc_mmap_file
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user         0 Feb 11 01:50 boinc_lockfile
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user      2544 Feb 11 01:50 pandaJob.out
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user   1009649 Feb 11 01:50 agis_schedconf.cvmfs.json
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user   1512955 Feb 11 01:50 agis_ddmendpoints.agis.ALL.json
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user       415 Feb 11 01:50 workernode_map.json
[2026-02-11 03:01:13] drwx------ 5 mf493845 unix-user       440 Feb 11 01:50 pilot3
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user 259499385 Feb 11 03:00 HITS.48431113._009949.pool.root.1
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user        95 Feb 11 03:00 pilot_heartbeat.json
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user      1018 Feb 11 03:00 memory_monitor_summary.json
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user    319893 Feb 11 03:00 log.48431113._009949.job.log.tgz.1
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user      6313 Feb 11 03:00 heartbeat.json
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user       744 Feb 11 03:01 pilotlog.txt
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user    633843 Feb 11 03:01 log.48431113._009949.job.log.1
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user       357 Feb 11 03:01 output.list
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user       620 Feb 11 03:01 runtime_log
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user    972800 Feb 11 03:01 result.tar.gz
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user      9219 Feb 11 03:01 runtime_log.err
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user       643 Feb 11 03:01 HdDMDmrZ298n9Rq4apOajLDm4fhM0noT9bVooX4SDmjPhKDmMNHMfn.diag
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user     22164 Feb 11 03:01 stderr.txt
[2026-02-11 03:01:13] HITS file was successfully produced:
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user 259499385 Feb 11 03:00 shared/HITS.pool.root.1
[2026-02-11 03:01:13]  *** Contents of shared directory: ***
[2026-02-11 03:01:13] total 889596
[2026-02-11 03:01:13] -rw-r--r-- 2 mf493845 unix-user     15845 Feb 11 01:50 start_atlas.sh
[2026-02-11 03:01:13] -rw-r--r-- 2 mf493845 unix-user    597958 Feb 11 01:50 input.tar.gz
[2026-02-11 03:01:13] -rw-r--r-- 2 mf493845 unix-user 649854540 Feb 11 01:50 ATLAS.root_0
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user 259499385 Feb 11 03:00 HITS.pool.root.1
[2026-02-11 03:01:13] -rw------- 1 mf493845 unix-user    972800 Feb 11 03:01 result.tar.gz
03:01:15 (3836): run_atlas exited; CPU time 27737.900468
03:01:15 (3836): called boinc_finish(0)

</stderr_txt>
]]>

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