Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
13:30:19 (819379): wrapper (7.7.26015): starting
13:30:19 (819379): wrapper: running run_atlas (--nthreads 8)
[2026-02-10 13:30:19] Arguments: --nthreads 8
[2026-02-10 13:30:19] Threads: 8
[2026-02-10 13:30:19] Checking for CVMFS
[2026-02-10 13:30:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 13:30:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 13:30:21] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 13:30:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 13:30:22] 2.13.3.0 50900 1049 52340 156089 3 188 1819128 20480001 2748 130560 0 2184482 99.696 674359 142 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-10 13:30:22] CVMFS is ok
[2026-02-10 13:30:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-10 13:30:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-10 13:30:22] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-10 13:30:22] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-10 13:30:22] Further information can be found at the LHC@home message board.
[2026-02-10 13:30:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 13:30:22] Checking for apptainer binary...
[2026-02-10 13:30:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 13:30:22] Running /usr/bin/apptainer --version
[2026-02-10 13:30:22] apptainer version 1.4.5
[2026-02-10 13:30:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 13:30:22] jonny-linux
[2026-02-10 13:30:22] apptainer works
[2026-02-10 13:30:22] Set ATHENA_PROC_NUMBER=8
[2026-02-10 13:30:22] Set ATHENA_CORE_NUMBER=8
[2026-02-10 13:30:22] Starting ATLAS job with PandaID=7007764569
[2026-02-10 13:30:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/radeon2/boinc3/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-10 14:52:56]  *** The last 200 lines of the pilot log: ***
[2026-02-10 14:52:56]  filetype=log
[2026-02-10 14:52:56]  guid=34eb3326-c852-423a-8c01-44b8559677a3
[2026-02-10 14:52:56]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-10 14:52:56]  is_altstaged=None
[2026-02-10 14:52:56]  is_tar=False
[2026-02-10 14:52:56]  lfn=log.48431113._010014.job.log.tgz.1
[2026-02-10 14:52:56]  mtime=0
[2026-02-10 14:52:56]  protocol_id=None
[2026-02-10 14:52:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-10 14:52:56]  replicas=None
[2026-02-10 14:52:56]  scope=mc23_13p6TeV
[2026-02-10 14:52:56]  status=None
[2026-02-10 14:52:56]  status_code=0
[2026-02-10 14:52:56]  storage_token=
[2026-02-10 14:52:56]  surl=/home/radeon2/boinc3/slots/1/PanDA_Pilot-7007764569/log.48431113._010014.job.log.tgz.1
[2026-02-10 14:52:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6e/76/log.48431113._010014.job.log.tgz.1
[2026-02-10 14:52:56]  workdir=None
[2026-02-10 14:52:56] ]
[2026-02-10 14:52:56] 2026-02-10 21:52:24,140 | INFO     | transferring file log.48431113._010014.job.log.tgz.1 from /home/radeon2/boinc3/slots/1/PanDA_Pilot-7007764569/log.48431113._010014.job.log.tgz.1 to /home/radeon2/b
[2026-02-10 14:52:56] 2026-02-10 21:52:24,141 | INFO     | executing command: /usr/bin/env mv /home/radeon2/boinc3/slots/1/PanDA_Pilot-7007764569/log.48431113._010014.job.log.tgz.1 /home/radeon2/boinc3/slots/1/log.48431113
[2026-02-10 14:52:56] 2026-02-10 21:52:24,155 | INFO     | adding to output.list: log.48431113._010014.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6e/76/log.48431113._010014.job.log.tg
[2026-02-10 14:52:56] 2026-02-10 21:52:24,156 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-10 14:52:56] 2026-02-10 21:52:24,156 | INFO     | summary of transferred files:
[2026-02-10 14:52:56] 2026-02-10 21:52:24,156 | INFO     |  -- lfn=log.48431113._010014.job.log.tgz.1, status_code=0, status=transferred
[2026-02-10 14:52:56] 2026-02-10 21:52:24,156 | INFO     | stage-out finished correctly
[2026-02-10 14:52:56] 2026-02-10 21:52:24,216 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-10 14:52:56] 2026-02-10 21:52:24,276 | INFO     | job 7007764569 has state=finished
[2026-02-10 14:52:56] 2026-02-10 21:52:24,276 | INFO     | preparing for final server update for job 7007764569 in state='finished'
[2026-02-10 14:52:56] 2026-02-10 21:52:24,276 | INFO     | reading metadata from: /home/radeon2/boinc3/slots/1/PanDA_Pilot-7007764569/jobReport.json
[2026-02-10 14:52:56] 2026-02-10 21:52:24,278 | INFO     | added worker_node to metadata from /home/radeon2/boinc3/slots/1/workernode_map.json
[2026-02-10 14:52:56] 2026-02-10 21:52:24,278 | INFO     | this job has now completed (state=finished)
[2026-02-10 14:52:56] 2026-02-10 21:52:24,278 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-10 14:52:56] 2026-02-10 21:52:24,278 | INFO     | log transfer has been attempted: DONE
[2026-02-10 14:52:56] 2026-02-10 21:52:24,278 | INFO     | job 7007764569 has finished - writing final server update
[2026-02-10 14:52:56] 2026-02-10 21:52:24,278 | INFO     | total number of processed events: 400 (read)
[2026-02-10 14:52:56] 2026-02-10 21:52:24,283 | INFO     | using path: /home/radeon2/boinc3/slots/1/PanDA_Pilot-7007764569/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 14:52:56] 2026-02-10 21:52:24,283 | INFO     | extracted standard info from prmon json
[2026-02-10 14:52:56] 2026-02-10 21:52:24,283 | INFO     | extracted standard memory fields from prmon json
[2026-02-10 14:52:56] 2026-02-10 21:52:24,283 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-10 14:52:56] 2026-02-10 21:52:24,283 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-10 14:52:56] 2026-02-10 21:52:24,283 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-10 14:52:56] 2026-02-10 21:52:24,284 | INFO     | fitting pss+swap vs Time
[2026-02-10 14:52:56] 2026-02-10 21:52:24,285 | INFO     | sum of square deviations: 120605052.0
[2026-02-10 14:52:56] 2026-02-10 21:52:24,285 | INFO     | sum of deviations: 1420653643.9999995
[2026-02-10 14:52:56] 2026-02-10 21:52:24,285 | INFO     | mean x: 1770757962.0
[2026-02-10 14:52:56] 2026-02-10 21:52:24,285 | INFO     | mean y: 2658708.479452055
[2026-02-10 14:52:56] 2026-02-10 21:52:24,285 | INFO     | intersect: -20855785524.49773
[2026-02-10 14:52:56] 2026-02-10 21:52:24,285 | INFO     | chi2: 0.003153656991846329
[2026-02-10 14:52:56] 2026-02-10 21:52:24,285 | INFO     | current memory leak: 11.78 B/s (using 73 data points, chi2=0.00)
[2026-02-10 14:52:56] 2026-02-10 21:52:24,285 | INFO     | could have reported an average CPU frequency of 3962 MHz (6 samples)
[2026-02-10 14:52:56] 2026-02-10 21:52:24,285 | INFO     | ..............................
[2026-02-10 14:52:56] 2026-02-10 21:52:24,286 | INFO     | . Timing measurements:
[2026-02-10 14:52:56] 2026-02-10 21:52:24,286 | INFO     | . get job = 0 s
[2026-02-10 14:52:56] 2026-02-10 21:52:24,286 | INFO     | . initial setup = 8 s
[2026-02-10 14:52:56] 2026-02-10 21:52:24,286 | INFO     | . payload setup = 3 s
[2026-02-10 14:52:56] 2026-02-10 21:52:24,286 | INFO     | . stage-in = 0 s
[2026-02-10 14:52:56] 2026-02-10 21:52:24,286 | INFO     | . payload execution = 4882 s
[2026-02-10 14:52:56] 2026-02-10 21:52:24,286 | INFO     | . stage-out = 0 s
[2026-02-10 14:52:56] 2026-02-10 21:52:24,286 | INFO     | . log creation = 0 s
[2026-02-10 14:52:56] 2026-02-10 21:52:24,286 | INFO     | ..............................
[2026-02-10 14:52:56] 2026-02-10 21:52:24,778 | INFO     | 
[2026-02-10 14:52:56] 2026-02-10 21:52:24,778 | INFO     | job summary report
[2026-02-10 14:52:56] 2026-02-10 21:52:24,778 | INFO     | --------------------------------------------------
[2026-02-10 14:52:56] 2026-02-10 21:52:24,778 | INFO     | PanDA job id: 7007764569
[2026-02-10 14:52:56] 2026-02-10 21:52:24,779 | INFO     | task id: 48431113
[2026-02-10 14:52:56] 2026-02-10 21:52:24,779 | INFO     | errors: (none)
[2026-02-10 14:52:56] 2026-02-10 21:52:24,779 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-10 14:52:56] 2026-02-10 21:52:24,779 | INFO     | pilot state: finished 
[2026-02-10 14:52:56] 2026-02-10 21:52:24,779 | INFO     | transexitcode: 0
[2026-02-10 14:52:56] 2026-02-10 21:52:24,779 | INFO     | exeerrorcode: 0
[2026-02-10 14:52:56] 2026-02-10 21:52:24,779 | INFO     | exeerrordiag: 
[2026-02-10 14:52:56] 2026-02-10 21:52:24,779 | INFO     | exitcode: 0
[2026-02-10 14:52:56] 2026-02-10 21:52:24,779 | INFO     | exitmsg: OK
[2026-02-10 14:52:56] 2026-02-10 21:52:24,779 | INFO     | cpuconsumptiontime: 35823 s
[2026-02-10 14:52:56] 2026-02-10 21:52:24,779 | INFO     | nevents: 400
[2026-02-10 14:52:56] 2026-02-10 21:52:24,779 | INFO     | neventsw: 0
[2026-02-10 14:52:56] 2026-02-10 21:52:24,779 | INFO     | pid: 828173
[2026-02-10 14:52:56] 2026-02-10 21:52:24,779 | INFO     | pgrp: 828173
[2026-02-10 14:52:56] 2026-02-10 21:52:24,779 | INFO     | corecount: 8
[2026-02-10 14:52:56] 2026-02-10 21:52:24,779 | INFO     | event service: False
[2026-02-10 14:52:56] 2026-02-10 21:52:24,779 | INFO     | sizes: {0: 2281765, 1: 2282282, 11: 2282282, 4890: 2308660, 4891: 2317864}
[2026-02-10 14:52:56] 2026-02-10 21:52:24,779 | INFO     | --------------------------------------------------
[2026-02-10 14:52:56] 2026-02-10 21:52:24,779 | INFO     | 
[2026-02-10 14:52:56] 2026-02-10 21:52:24,779 | INFO     | executing command: ls -lF /home/radeon2/boinc3/slots/1
[2026-02-10 14:52:56] 2026-02-10 21:52:24,794 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-10 14:52:56] 2026-02-10 21:52:24,795 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-10 14:52:56] 2026-02-10 21:52:24,795 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-10 14:52:56] 2026-02-10 21:52:24,795 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-10 14:52:56] 2026-02-10 21:52:24,795 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-10 14:52:56] 2026-02-10 21:52:24,795 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-10 14:52:56] 2026-02-10 21:52:24,795 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-10 14:52:56] 2026-02-10 21:52:24,795 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-10 14:52:56] 2026-02-10 21:52:24,795 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-10 14:52:56] 2026-02-10 21:52:24,795 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-10 14:52:56] 2026-02-10 21:52:24,795 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-10 14:52:56] 2026-02-10 21:52:24,795 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-10 14:52:56] 2026-02-10 21:52:24,795 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-10 14:52:56] 2026-02-10 21:52:24,795 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-10 14:52:56] 2026-02-10 21:52:24,795 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-10 14:52:56] 2026-02-10 21:52:24,795 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-10 14:52:56] 2026-02-10 21:52:24,795 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-10 14:52:56] 2026-02-10 21:52:24,796 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-10 14:52:56] 2026-02-10 21:52:24,796 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-10 14:52:56] 2026-02-10 21:52:24,796 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-10 14:52:56] 2026-02-10 21:52:24,796 | INFO     | job 7007764569 has completed (purged errors)
[2026-02-10 14:52:56] 2026-02-10 21:52:24,796 | INFO     | overall cleanup function is called
[2026-02-10 14:52:56] 2026-02-10 21:52:25,804 | INFO     | --- collectZombieJob: --- 10, [828173]
[2026-02-10 14:52:56] 2026-02-10 21:52:25,804 | INFO     | zombie collector waiting for pid 828173
[2026-02-10 14:52:56] 2026-02-10 21:52:25,804 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-10 14:52:56] 2026-02-10 21:52:25,804 | INFO     | collected zombie processes
[2026-02-10 14:52:56] 2026-02-10 21:52:25,804 | INFO     | will attempt to kill all subprocesses of pid=828173
[2026-02-10 14:52:56] 2026-02-10 21:52:25,948 | INFO     | process IDs to be killed: [828173] (in reverse order)
[2026-02-10 14:52:56] 2026-02-10 21:52:26,000 | WARNING  | found no corresponding commands to process id(s)
[2026-02-10 14:52:56] 2026-02-10 21:52:26,000 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-10 14:52:56] 2026-02-10 21:52:26,004 | INFO     | did not find any defunct processes belonging to 828173
[2026-02-10 14:52:56] 2026-02-10 21:52:26,007 | INFO     | did not find any defunct processes belonging to 828173
[2026-02-10 14:52:56] 2026-02-10 21:52:26,007 | INFO     | ready for new job
[2026-02-10 14:52:56] 2026-02-10 21:52:26,007 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-10 14:52:56] 2026-02-10 21:52:26,009 | INFO     | **************************************
[2026-02-10 14:52:56] 2026-02-10 21:52:26,009 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-10 14:52:56] 2026-02-10 21:52:26,009 | INFO     | **************************************
[2026-02-10 14:52:56] 2026-02-10 21:52:26,009 | INFO     | 
[2026-02-10 14:52:56] 2026-02-10 21:52:26,010 | INFO     | architecture information:
[2026-02-10 14:52:56] 2026-02-10 21:52:26,010 | INFO     | executing command: cat /etc/os-release
[2026-02-10 14:52:56] 2026-02-10 21:52:26,022 | INFO     | cat /etc/os-release:
[2026-02-10 14:52:56] NAME="CentOS Linux"
[2026-02-10 14:52:56] VERSION="7 (Core)"
[2026-02-10 14:52:56] ID="centos"
[2026-02-10 14:52:56] ID_LIKE="rhel fedora"
[2026-02-10 14:52:56] VERSION_ID="7"
[2026-02-10 14:52:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-10 14:52:56] ANSI_COLOR="0;31"
[2026-02-10 14:52:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-10 14:52:56] HOME_URL="https://www.centos.org/"
[2026-02-10 14:52:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-10 14:52:56] 
[2026-02-10 14:52:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-10 14:52:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-10 14:52:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-10 14:52:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-10 14:52:56] 
[2026-02-10 14:52:56] 2026-02-10 21:52:26,022 | INFO     | **************************************
[2026-02-10 14:52:56] 2026-02-10 21:52:26,525 | INFO     | executing command: df -mP /home/radeon2/boinc3/slots/1
[2026-02-10 14:52:56] 2026-02-10 21:52:26,537 | INFO     | sufficient remaining disk space (26772242432 B)
[2026-02-10 14:52:56] 2026-02-10 21:52:26,537 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-10 14:52:56] 2026-02-10 21:52:26,537 | INFO     | current server update state: UPDATING_FINAL
[2026-02-10 14:52:56] 2026-02-10 21:52:26,537 | INFO     | update_server=False
[2026-02-10 14:52:56] 2026-02-10 21:52:26,537 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-10 14:52:56] 2026-02-10 21:52:26,537 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-10 14:52:56] 2026-02-10 21:52:26,628 | INFO     | all data control threads have been joined
[2026-02-10 14:52:56] 2026-02-10 21:52:27,221 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-10 14:52:56] 2026-02-10 21:52:27,427 | INFO     | all payload control threads have been joined
[2026-02-10 14:52:56] 2026-02-10 21:52:27,542 | INFO     | [job] retrieve thread has finished
[2026-02-10 14:52:56] 2026-02-10 21:52:27,574 | INFO     | [payload] execute_payloads thread has finished
[2026-02-10 14:52:56] 2026-02-10 21:52:27,633 | INFO     | [data] control thread has finished
[2026-02-10 14:52:56] 2026-02-10 21:52:27,646 | INFO     | [data] copytool_in thread has finished
[2026-02-10 14:52:56] 2026-02-10 21:52:27,718 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-10 14:52:56] 2026-02-10 21:52:27,736 | INFO     | all job control threads have been joined
[2026-02-10 14:52:56] 2026-02-10 21:52:27,804 | WARNING  | process 828173 can no longer be monitored (due to stat problems) - aborting
[2026-02-10 14:52:56] 2026-02-10 21:52:27,831 | INFO     | [payload] validate_post thread has finished
[2026-02-10 14:52:56] 2026-02-10 21:52:27,893 | INFO     | using path: /home/radeon2/boinc3/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 14:52:56] 2026-02-10 21:52:28,025 | INFO     | number of running child processes to parent process 828173: 1
[2026-02-10 14:52:56] 2026-02-10 21:52:28,026 | INFO     | maximum number of monitored processes: 6
[2026-02-10 14:52:56] 2026-02-10 21:52:28,026 | INFO     | aborting job monitoring since job object (job id=7007764569) has expired
[2026-02-10 14:52:56] 2026-02-10 21:52:28,026 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-10 14:52:56] 2026-02-10 21:52:28,026 | INFO     | will abort loop
[2026-02-10 14:52:56] 2026-02-10 21:52:28,433 | INFO     | [payload] control thread has finished
[2026-02-10 14:52:56] 2026-02-10 21:52:28,535 | INFO     | [payload] failed_post thread has finished
[2026-02-10 14:52:56] 2026-02-10 21:52:28,620 | INFO     | [job] validate thread has finished
[2026-02-10 14:52:56] 2026-02-10 21:52:28,741 | INFO     | [job] control thread has finished
[2026-02-10 14:52:56] 2026-02-10 21:52:28,904 | INFO     | [job] create_data_payload thread has finished
[2026-02-10 14:52:56] 2026-02-10 21:52:28,989 | INFO     | [payload] validate_pre thread has finished
[2026-02-10 14:52:56] 2026-02-10 21:52:29,031 | INFO     | [job] job monitor thread has finished
[2026-02-10 14:52:56] 2026-02-10 21:52:29,226 | INFO     | [data] copytool_out thread has finished
[2026-02-10 14:52:56] 2026-02-10 21:52:29,353 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-10 14:52:56] 2026-02-10 21:52:30,356 | INFO     | [job] queue monitor thread has finished
[2026-02-10 14:52:56] 2026-02-10 21:52:30,542 | INFO     | [data] queue_monitor thread has finished
[2026-02-10 14:52:56] 2026-02-10 21:52:49,946 | INFO     | [monitor] cgroup control has ended
[2026-02-10 14:52:56] 2026-02-10 21:52:50,952 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134082336978752)>', '<ExcThread(monitor, started 134081622828800)>']
[2026-02-10 14:52:56] 2026-02-10 21:52:55,977 | INFO     | all workflow threads have been joined
[2026-02-10 14:52:56] 2026-02-10 21:52:55,977 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-10 14:52:56] 2026-02-10 21:52:55,977 | INFO     | traces error code: 0
[2026-02-10 14:52:56] 2026-02-10 21:52:55,977 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-10 14:52:56] 2026-02-10 21:52:56,203 | INFO     | PID=823605 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-10 14:52:56] 2026-02-10 21:52:56,203 | INFO     | .. there are 4 such processes running
[2026-02-10 14:52:56] 2026-02-10 21:52:56,203 | INFO     | found 0 job(s) in 20 queues
[2026-02-10 14:52:56] 2026-02-10 21:52:56,203 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-10 14:52:56] 2026-02-10 21:52:56,203 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-10 14:52:56] 2026-02-10 21:52:56,203 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-10 14:52:56] 2026-02-10 21:52:56,203 | INFO     | [monitor] control thread has ended
[2026-02-10 14:52:56] 2026-02-10 21:52:56,263 [wrapper] ==== pilot stdout END ====
[2026-02-10 14:52:56] 2026-02-10 21:52:56,264 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-10 14:52:56] 2026-02-10 21:52:56,266 [wrapper] pilotpid: 823605
[2026-02-10 14:52:56] 2026-02-10 21:52:56,268 [wrapper] Pilot exit status: 0
[2026-02-10 14:52:56] 2026-02-10 21:52:56,273 [wrapper] pandaids: 7007764569
[2026-02-10 14:52:56] 2026-02-10 21:52:56,298 [wrapper] cleanup supervisor_pilot  887267 823606
[2026-02-10 14:52:56] 2026-02-10 21:52:56,299 [wrapper] Test setup, not cleaning
[2026-02-10 14:52:56] 2026-02-10 21:52:56,301 [wrapper] apfmon messages muted
[2026-02-10 14:52:56] 2026-02-10 21:52:56,302 [wrapper] ==== wrapper stdout END ====
[2026-02-10 14:52:56] 2026-02-10 21:52:56,304 [wrapper] ==== wrapper stderr END ====
[2026-02-10 14:52:56]  *** Error codes and diagnostics ***
[2026-02-10 14:52:56]     "exeErrorCode": 0,
[2026-02-10 14:52:56]     "exeErrorDiag": "",
[2026-02-10 14:52:56]     "pilotErrorCode": 0,
[2026-02-10 14:52:56]     "pilotErrorDiag": "",
[2026-02-10 14:52:56]  *** Listing of results directory ***
[2026-02-10 14:52:56] total 897404
[2026-02-10 14:52:56] -rw-r--r-- 1 radeon2 radeon2    584627 Feb 10 06:02 pilot3.tar.gz
[2026-02-10 14:52:56] -rwx------ 1 radeon2 radeon2     36322 Feb 10 06:03 runpilot2-wrapper.sh
[2026-02-10 14:52:56] -rw-r--r-- 1 radeon2 radeon2      5111 Feb 10 06:07 queuedata.json
[2026-02-10 14:52:56] -rw-rw-r-- 1 radeon2 radeon2       100 Feb 10 13:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-10 14:52:56] -rwxr-xr-x 1 radeon2 radeon2      7986 Feb 10 13:30 run_atlas
[2026-02-10 14:52:56] -rw-rw-r-- 1 radeon2 radeon2       105 Feb 10 13:30 job.xml
[2026-02-10 14:52:56] -rw-r--r-- 2 radeon2 radeon2 648798187 Feb 10 13:30 EVNT.48431111._000195.pool.root.1
[2026-02-10 14:52:56] -rw-r--r-- 2 radeon2 radeon2     15845 Feb 10 13:30 start_atlas.sh
[2026-02-10 14:52:56] drwxrwx--x 2 radeon2 radeon2      4096 Feb 10 13:30 shared
[2026-02-10 14:52:56] -rw-r--r-- 2 radeon2 radeon2    597953 Feb 10 13:30 input.tar.gz
[2026-02-10 14:52:56] -rw-rw-r-- 1 radeon2 radeon2      9200 Feb 10 13:30 init_data.xml
[2026-02-10 14:52:56] -rw-rw-r-- 1 radeon2 radeon2         0 Feb 10 13:30 boinc_setup_complete
[2026-02-10 14:52:56] -rw-rw-r-- 1 radeon2 radeon2         0 Feb 10 13:30 boinc_lockfile
[2026-02-10 14:52:56] -rw-rw-r-- 1 radeon2 radeon2      2545 Feb 10 13:30 pandaJob.out
[2026-02-10 14:52:56] -rw------- 1 radeon2 radeon2   1009534 Feb 10 13:30 agis_schedconf.cvmfs.json
[2026-02-10 14:52:56] -rw------- 1 radeon2 radeon2   1512955 Feb 10 13:30 agis_ddmendpoints.agis.ALL.json
[2026-02-10 14:52:56] -rw------- 1 radeon2 radeon2       425 Feb 10 13:30 workernode_map.json
[2026-02-10 14:52:56] drwx------ 5 radeon2 radeon2      4096 Feb 10 13:30 pilot3
[2026-02-10 14:52:56] -rw-rw-r-- 1 radeon2 radeon2       530 Feb 10 14:51 boinc_task_state.xml
[2026-02-10 14:52:56] -rw------- 1 radeon2 radeon2 264050912 Feb 10 14:51 HITS.48431113._010014.pool.root.1
[2026-02-10 14:52:56] -rw------- 1 radeon2 radeon2      1025 Feb 10 14:52 memory_monitor_summary.json
[2026-02-10 14:52:56] -rw------- 1 radeon2 radeon2    349211 Feb 10 14:52 log.48431113._010014.job.log.tgz.1
[2026-02-10 14:52:56] -rw------- 1 radeon2 radeon2      6291 Feb 10 14:52 heartbeat.json
[2026-02-10 14:52:56] -rw-rw-r-- 1 radeon2 radeon2        27 Feb 10 14:52 wrapper_checkpoint.txt
[2026-02-10 14:52:56] -rw-rw-r-- 1 radeon2 radeon2      8192 Feb 10 14:52 boinc_mmap_file
[2026-02-10 14:52:56] -rw------- 1 radeon2 radeon2       821 Feb 10 14:52 pilotlog.txt
[2026-02-10 14:52:56] -rw------- 1 radeon2 radeon2        95 Feb 10 14:52 pilot_heartbeat.json
[2026-02-10 14:52:56] -rw------- 1 radeon2 radeon2    724958 Feb 10 14:52 log.48431113._010014.job.log.1
[2026-02-10 14:52:56] -rw------- 1 radeon2 radeon2       357 Feb 10 14:52 output.list
[2026-02-10 14:52:56] -rw-rw-r-- 1 radeon2 radeon2       620 Feb 10 14:52 runtime_log
[2026-02-10 14:52:56] -rw------- 1 radeon2 radeon2   1095680 Feb 10 14:52 result.tar.gz
[2026-02-10 14:52:56] -rw-rw-r-- 1 radeon2 radeon2      8910 Feb 10 14:52 runtime_log.err
[2026-02-10 14:52:56] -rw------- 1 radeon2 radeon2       654 Feb 10 14:52 rFRNDmUa298n9Rq4apOajLDm4fhM0noT9bVooX4SDmRVhKDmO7mtSn.diag
[2026-02-10 14:52:56] -rw-rw-r-- 1 radeon2 radeon2     21484 Feb 10 14:52 stderr.txt
[2026-02-10 14:52:56] HITS file was successfully produced:
[2026-02-10 14:52:56] -rw------- 1 radeon2 radeon2 264050912 Feb 10 14:51 shared/HITS.pool.root.1
[2026-02-10 14:52:56]  *** Contents of shared directory: ***
[2026-02-10 14:52:56] total 893136
[2026-02-10 14:52:56] -rw-r--r-- 2 radeon2 radeon2 648798187 Feb 10 13:30 ATLAS.root_0
[2026-02-10 14:52:56] -rw-r--r-- 2 radeon2 radeon2     15845 Feb 10 13:30 start_atlas.sh
[2026-02-10 14:52:56] -rw-r--r-- 2 radeon2 radeon2    597953 Feb 10 13:30 input.tar.gz
[2026-02-10 14:52:56] -rw------- 1 radeon2 radeon2 264050912 Feb 10 14:51 HITS.pool.root.1
[2026-02-10 14:52:56] -rw------- 1 radeon2 radeon2   1095680 Feb 10 14:52 result.tar.gz
14:52:57 (819379): run_atlas exited; CPU time 35829.275473
14:52:57 (819379): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN