Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:58:39 (4478): wrapper (7.7.26015): starting
12:58:39 (4478): wrapper: running run_atlas (--nthreads 8)
[2026-02-10 12:58:39] Arguments: --nthreads 8
[2026-02-10 12:58:39] Threads: 8
[2026-02-10 12:58:39] Checking for CVMFS
[2026-02-10 12:58:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 12:58:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 12:58:40] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 12:58:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 12:58:40] 2.11.4.0 31920 92333 75968 156089 3 188 10305046 18432000 1833 130560 0 52687528 99.991 2976201 29016 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-10 12:58:40] CVMFS is ok
[2026-02-10 12:58:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-10 12:58:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-10 12:58:40] Further information can be found at the LHC@home message board.
[2026-02-10 12:58:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 12:58:40] Checking for apptainer binary...
[2026-02-10 12:58:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 12:58:40] Running /usr/bin/apptainer --version
[2026-02-10 12:58:40] apptainer version 1.3.2-1.el7
[2026-02-10 12:58:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 12:58:41] c-206-22.aglt2.org
[2026-02-10 12:58:41] apptainer works
[2026-02-10 12:58:41] Set ATHENA_PROC_NUMBER=8
[2026-02-10 12:58:41] Set ATHENA_CORE_NUMBER=8
[2026-02-10 12:58:41] Starting ATLAS job with PandaID=7007445803
[2026-02-10 12:58:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-10 15:54:39]  *** The last 200 lines of the pilot log: ***
[2026-02-10 15:54:39] 2026-02-10 20:54:06,453 | INFO     | mean y: 2592454.1511627906
[2026-02-10 15:54:39] 2026-02-10 20:54:06,453 | INFO     | intersect: -40872621947.93686
[2026-02-10 15:54:39] 2026-02-10 20:54:06,454 | INFO     | chi2: 1.5473823322729305
[2026-02-10 15:54:39] 2026-02-10 20:54:06,454 | INFO     | sum of square deviations: 1444149868.0
[2026-02-10 15:54:39] 2026-02-10 20:54:06,455 | INFO     | sum of deviations: 35355448231.99999
[2026-02-10 15:54:39] 2026-02-10 20:54:06,455 | INFO     | mean x: 1770751410.0
[2026-02-10 15:54:39] 2026-02-10 20:54:06,455 | INFO     | mean y: 2591248.988023952
[2026-02-10 15:54:39] 2026-02-10 20:54:06,455 | INFO     | intersect: -43348664181.79252
[2026-02-10 15:54:39] 2026-02-10 20:54:06,456 | INFO     | chi2: 1.546791879614555
[2026-02-10 15:54:39] 2026-02-10 20:54:06,456 | INFO     | current chi2=1.546791879614555 (change=0.03815816208190973 %)
[2026-02-10 15:54:39] 2026-02-10 20:54:06,456 | INFO     | right removable region: 166
[2026-02-10 15:54:39] 2026-02-10 20:54:06,456 | INFO     | sum of square deviations: 1444149868.0
[2026-02-10 15:54:39] 2026-02-10 20:54:06,457 | INFO     | sum of deviations: 6473840574.0
[2026-02-10 15:54:39] 2026-02-10 20:54:06,457 | INFO     | mean x: 1770751715.0
[2026-02-10 15:54:39] 2026-02-10 20:54:06,457 | INFO     | mean y: 2626260.706586826
[2026-02-10 15:54:39] 2026-02-10 20:54:06,457 | INFO     | intersect: -7935306327.220003
[2026-02-10 15:54:39] 2026-02-10 20:54:06,457 | INFO     | chi2: 0.06273524681813715
[2026-02-10 15:54:39] 2026-02-10 20:54:06,458 | INFO     | current chi2=0.06273524681813715 (change=95.94571777706766 %)
[2026-02-10 15:54:39] 2026-02-10 20:54:06,458 | INFO     | sum of square deviations: 1318277740.5
[2026-02-10 15:54:39] 2026-02-10 20:54:06,459 | INFO     | sum of deviations: 190540240.50000024
[2026-02-10 15:54:39] 2026-02-10 20:54:06,459 | INFO     | mean x: 1770751867.5
[2026-02-10 15:54:39] 2026-02-10 20:54:06,459 | INFO     | mean y: 2633809.561728395
[2026-02-10 15:54:39] 2026-02-10 20:54:06,459 | INFO     | intersect: -253305797.34637642
[2026-02-10 15:54:39] 2026-02-10 20:54:06,460 | INFO     | chi2: 0.0064169643866450595
[2026-02-10 15:54:39] 2026-02-10 20:54:06,460 | INFO     | current chi2=0.0064169643866450595 (change=89.77135707260838 %)
[2026-02-10 15:54:39] 2026-02-10 20:54:06,460 | INFO     | sum of square deviations: 1199940638.0
[2026-02-10 15:54:39] 2026-02-10 20:54:06,461 | INFO     | sum of deviations: -682617816.0
[2026-02-10 15:54:39] 2026-02-10 20:54:06,461 | INFO     | mean x: 1770752020.0
[2026-02-10 15:54:39] 2026-02-10 20:54:06,462 | INFO     | mean y: 2634928.5031847134
[2026-02-10 15:54:39] 2026-02-10 20:54:06,462 | INFO     | intersect: 1009973823.6877549
[2026-02-10 15:54:39] 2026-02-10 20:54:06,462 | INFO     | chi2: 0.005331775619143057
[2026-02-10 15:54:39] 2026-02-10 20:54:06,462 | INFO     | current chi2=0.005331775619143057 (change=16.911248093576614 %)
[2026-02-10 15:54:39] 2026-02-10 20:54:06,462 | INFO     | left removable region: 30
[2026-02-10 15:54:39] 2026-02-10 20:54:06,463 | INFO     | sum of square deviations: 779958810.0
[2026-02-10 15:54:39] 2026-02-10 20:54:06,463 | INFO     | sum of deviations: -1528448177.5
[2026-02-10 15:54:39] 2026-02-10 20:54:06,464 | INFO     | mean x: 1770752294.5
[2026-02-10 15:54:39] 2026-02-10 20:54:06,464 | INFO     | mean y: 2636811.963235294
[2026-02-10 15:54:39] 2026-02-10 20:54:06,464 | INFO     | intersect: 3472695849.225047
[2026-02-10 15:54:39] 2026-02-10 20:54:06,464 | INFO     | chi2: 0.0038311250055839963
[2026-02-10 15:54:39] 2026-02-10 20:54:06,465 | INFO     | current memory leak: -1.96 B/s (using 136 data points, chi2=0.00)
[2026-02-10 15:54:39] 2026-02-10 20:54:06,465 | INFO     | could have reported an average CPU frequency of 2477 MHz (9 samples)
[2026-02-10 15:54:39] 2026-02-10 20:54:06,465 | INFO     | ..............................
[2026-02-10 15:54:39] 2026-02-10 20:54:06,466 | INFO     | . Timing measurements:
[2026-02-10 15:54:39] 2026-02-10 20:54:06,466 | INFO     | . get job = 0 s
[2026-02-10 15:54:39] 2026-02-10 20:54:06,466 | INFO     | . initial setup = 6 s
[2026-02-10 15:54:39] 2026-02-10 20:54:06,466 | INFO     | . payload setup = 5 s
[2026-02-10 15:54:39] 2026-02-10 20:54:06,466 | INFO     | . stage-in = 0 s
[2026-02-10 15:54:39] 2026-02-10 20:54:06,467 | INFO     | . payload execution = 10494 s
[2026-02-10 15:54:39] 2026-02-10 20:54:06,467 | INFO     | . stage-out = 0 s
[2026-02-10 15:54:39] 2026-02-10 20:54:06,467 | INFO     | . log creation = 0 s
[2026-02-10 15:54:39] 2026-02-10 20:54:06,467 | INFO     | ..............................
[2026-02-10 15:54:39] 2026-02-10 20:54:06,544 | INFO     | 
[2026-02-10 15:54:39] 2026-02-10 20:54:06,545 | INFO     | job summary report
[2026-02-10 15:54:39] 2026-02-10 20:54:06,545 | INFO     | --------------------------------------------------
[2026-02-10 15:54:39] 2026-02-10 20:54:06,545 | INFO     | PanDA job id: 7007445803
[2026-02-10 15:54:39] 2026-02-10 20:54:06,545 | INFO     | task id: 48442031
[2026-02-10 15:54:39] 2026-02-10 20:54:06,545 | INFO     | errors: (none)
[2026-02-10 15:54:39] 2026-02-10 20:54:06,546 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-10 15:54:39] 2026-02-10 20:54:06,546 | INFO     | pilot state: finished 
[2026-02-10 15:54:39] 2026-02-10 20:54:06,546 | INFO     | transexitcode: 0
[2026-02-10 15:54:39] 2026-02-10 20:54:06,546 | INFO     | exeerrorcode: 0
[2026-02-10 15:54:39] 2026-02-10 20:54:06,547 | INFO     | exeerrordiag: 
[2026-02-10 15:54:39] 2026-02-10 20:54:06,547 | INFO     | exitcode: 0
[2026-02-10 15:54:39] 2026-02-10 20:54:06,547 | INFO     | exitmsg: OK
[2026-02-10 15:54:39] 2026-02-10 20:54:06,547 | INFO     | cpuconsumptiontime: 78930 s
[2026-02-10 15:54:39] 2026-02-10 20:54:06,547 | INFO     | nevents: 400
[2026-02-10 15:54:39] 2026-02-10 20:54:06,548 | INFO     | neventsw: 0
[2026-02-10 15:54:39] 2026-02-10 20:54:06,548 | INFO     | pid: 12994
[2026-02-10 15:54:39] 2026-02-10 20:54:06,548 | INFO     | pgrp: 12994
[2026-02-10 15:54:39] 2026-02-10 20:54:06,548 | INFO     | corecount: 8
[2026-02-10 15:54:39] 2026-02-10 20:54:06,548 | INFO     | event service: False
[2026-02-10 15:54:39] 2026-02-10 20:54:06,549 | INFO     | sizes: {0: 2282115, 1: 2282203, 10503: 2310998, 10505: 2319996, 10508: 2320052, 10509: 2320310}
[2026-02-10 15:54:39] 2026-02-10 20:54:06,549 | INFO     | --------------------------------------------------
[2026-02-10 15:54:39] 2026-02-10 20:54:06,549 | INFO     | 
[2026-02-10 15:54:39] 2026-02-10 20:54:06,549 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-10 15:54:39] 2026-02-10 20:54:06,564 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-10 15:54:39] 2026-02-10 20:54:06,565 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-10 15:54:39] 2026-02-10 20:54:06,565 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-10 15:54:39] 2026-02-10 20:54:06,565 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-10 15:54:39] 2026-02-10 20:54:06,565 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-10 15:54:39] 2026-02-10 20:54:06,566 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-10 15:54:39] 2026-02-10 20:54:06,566 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-10 15:54:39] 2026-02-10 20:54:06,566 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-10 15:54:39] 2026-02-10 20:54:06,566 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-10 15:54:39] 2026-02-10 20:54:06,566 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-10 15:54:39] 2026-02-10 20:54:06,566 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-10 15:54:39] 2026-02-10 20:54:06,567 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-10 15:54:39] 2026-02-10 20:54:06,567 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-10 15:54:39] 2026-02-10 20:54:06,567 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-10 15:54:39] 2026-02-10 20:54:06,567 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-10 15:54:39] 2026-02-10 20:54:06,567 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-10 15:54:39] 2026-02-10 20:54:06,567 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-10 15:54:39] 2026-02-10 20:54:06,567 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-10 15:54:39] 2026-02-10 20:54:06,568 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-10 15:54:39] 2026-02-10 20:54:06,568 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-10 15:54:39] 2026-02-10 20:54:06,568 | INFO     | job 7007445803 has completed (purged errors)
[2026-02-10 15:54:39] 2026-02-10 20:54:06,568 | INFO     | overall cleanup function is called
[2026-02-10 15:54:39] 2026-02-10 20:54:06,640 | WARNING  | process 12994 can no longer be monitored (due to stat problems) - aborting
[2026-02-10 15:54:39] 2026-02-10 20:54:06,723 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 15:54:39] 2026-02-10 20:54:06,723 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 15:54:39] 2026-02-10 20:54:06,724 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-10 15:54:39] 2026-02-10 20:54:06,724 | WARNING  | maxPSS not found in memory monitor output
[2026-02-10 15:54:39] 2026-02-10 20:54:06,724 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-7007445803/payload.stdout) since it has not been created yet
[2026-02-10 15:54:39] 2026-02-10 20:54:06,724 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-10 15:54:39] 2026-02-10 20:54:06,735 | INFO     | sufficient remaining disk space (26231177216 B)
[2026-02-10 15:54:39] 2026-02-10 20:54:06,736 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-10 15:54:39] 2026-02-10 20:54:06,736 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7007445803/HITS.48442031._008648.pool.root.1 since it does not exist
[2026-02-10 15:54:39] 2026-02-10 20:54:06,841 | INFO     | number of running child processes to parent process 12994: 1
[2026-02-10 15:54:39] 2026-02-10 20:54:06,842 | INFO     | maximum number of monitored processes: 6
[2026-02-10 15:54:39] 2026-02-10 20:54:06,842 | INFO     | aborting job monitoring since job object (job id=7007445803) has expired
[2026-02-10 15:54:39] 2026-02-10 20:54:07,577 | INFO     | --- collectZombieJob: --- 10, [12994]
[2026-02-10 15:54:39] 2026-02-10 20:54:07,577 | INFO     | zombie collector waiting for pid 12994
[2026-02-10 15:54:39] 2026-02-10 20:54:07,577 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-10 15:54:39] 2026-02-10 20:54:07,577 | INFO     | collected zombie processes
[2026-02-10 15:54:39] 2026-02-10 20:54:07,577 | INFO     | will attempt to kill all subprocesses of pid=12994
[2026-02-10 15:54:39] 2026-02-10 20:54:07,682 | INFO     | process IDs to be killed: [12994] (in reverse order)
[2026-02-10 15:54:39] 2026-02-10 20:54:07,721 | WARNING  | found no corresponding commands to process id(s)
[2026-02-10 15:54:39] 2026-02-10 20:54:07,721 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-10 15:54:39] 2026-02-10 20:54:07,723 | INFO     | did not find any defunct processes belonging to 12994
[2026-02-10 15:54:39] 2026-02-10 20:54:07,726 | INFO     | did not find any defunct processes belonging to 12994
[2026-02-10 15:54:39] 2026-02-10 20:54:07,726 | INFO     | ready for new job
[2026-02-10 15:54:39] 2026-02-10 20:54:07,726 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-10 15:54:39] 2026-02-10 20:54:07,727 | INFO     | **************************************
[2026-02-10 15:54:39] 2026-02-10 20:54:07,728 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-10 15:54:39] 2026-02-10 20:54:07,728 | INFO     | **************************************
[2026-02-10 15:54:39] 2026-02-10 20:54:07,728 | INFO     | 
[2026-02-10 15:54:39] 2026-02-10 20:54:07,729 | INFO     | architecture information:
[2026-02-10 15:54:39] 2026-02-10 20:54:07,729 | INFO     | executing command: cat /etc/os-release
[2026-02-10 15:54:39] 2026-02-10 20:54:07,739 | INFO     | cat /etc/os-release:
[2026-02-10 15:54:39] NAME="CentOS Linux"
[2026-02-10 15:54:39] VERSION="7 (Core)"
[2026-02-10 15:54:39] ID="centos"
[2026-02-10 15:54:39] ID_LIKE="rhel fedora"
[2026-02-10 15:54:39] VERSION_ID="7"
[2026-02-10 15:54:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-10 15:54:39] ANSI_COLOR="0;31"
[2026-02-10 15:54:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-10 15:54:39] HOME_URL="https://www.centos.org/"
[2026-02-10 15:54:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-10 15:54:39] 
[2026-02-10 15:54:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-10 15:54:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-10 15:54:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-10 15:54:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-10 15:54:39] 
[2026-02-10 15:54:39] 2026-02-10 20:54:07,739 | INFO     | **************************************
[2026-02-10 15:54:39] 2026-02-10 20:54:08,242 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-10 15:54:39] 2026-02-10 20:54:08,252 | INFO     | sufficient remaining disk space (26232225792 B)
[2026-02-10 15:54:39] 2026-02-10 20:54:08,252 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-10 15:54:39] 2026-02-10 20:54:08,253 | INFO     | current server update state: UPDATING_FINAL
[2026-02-10 15:54:39] 2026-02-10 20:54:08,253 | INFO     | update_server=False
[2026-02-10 15:54:39] 2026-02-10 20:54:08,253 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-10 15:54:39] 2026-02-10 20:54:08,253 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-10 15:54:39] 2026-02-10 20:54:08,253 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-10 15:54:39] 2026-02-10 20:54:08,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-10 15:54:39] 2026-02-10 20:54:08,254 | INFO     | aborting loop
[2026-02-10 15:54:39] 2026-02-10 20:54:08,389 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-10 15:54:39] 2026-02-10 20:54:08,573 | INFO     | all job control threads have been joined
[2026-02-10 15:54:39] 2026-02-10 20:54:08,864 | INFO     | all payload control threads have been joined
[2026-02-10 15:54:39] 2026-02-10 20:54:08,914 | INFO     | all data control threads have been joined
[2026-02-10 15:54:39] 2026-02-10 20:54:09,258 | INFO     | [job] retrieve thread has finished
[2026-02-10 15:54:39] 2026-02-10 20:54:09,259 | INFO     | [job] job monitor thread has finished
[2026-02-10 15:54:39] 2026-02-10 20:54:09,259 | INFO     | [job] queue monitor thread has finished
[2026-02-10 15:54:39] 2026-02-10 20:54:09,579 | INFO     | [job] control thread has finished
[2026-02-10 15:54:39] 2026-02-10 20:54:09,798 | INFO     | [job] create_data_payload thread has finished
[2026-02-10 15:54:39] 2026-02-10 20:54:09,869 | INFO     | [payload] control thread has finished
[2026-02-10 15:54:39] 2026-02-10 20:54:09,882 | INFO     | [payload] validate_post thread has finished
[2026-02-10 15:54:39] 2026-02-10 20:54:09,919 | INFO     | [data] control thread has finished
[2026-02-10 15:54:39] 2026-02-10 20:54:09,995 | INFO     | [job] validate thread has finished
[2026-02-10 15:54:39] 2026-02-10 20:54:10,008 | INFO     | [data] copytool_in thread has finished
[2026-02-10 15:54:39] 2026-02-10 20:54:10,028 | INFO     | [payload] validate_pre thread has finished
[2026-02-10 15:54:39] 2026-02-10 20:54:10,395 | INFO     | [data] copytool_out thread has finished
[2026-02-10 15:54:39] 2026-02-10 20:54:10,492 | INFO     | [payload] execute_payloads thread has finished
[2026-02-10 15:54:39] 2026-02-10 20:54:10,700 | INFO     | [payload] failed_post thread has finished
[2026-02-10 15:54:39] 2026-02-10 20:54:12,259 | INFO     | [data] queue_monitor thread has finished
[2026-02-10 15:54:39] 2026-02-10 20:54:12,799 | INFO     | [monitor] cgroup control has ended
[2026-02-10 15:54:39] 2026-02-10 20:54:18,796 | INFO     | job.realtimelogging is not enabled
[2026-02-10 15:54:39] 2026-02-10 20:54:19,802 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-10 15:54:39] 2026-02-10 20:54:20,168 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140097696397120)>', '<ExcThread(monitor, started 140097253005056)>']
[2026-02-10 15:54:39] 2026-02-10 20:54:25,189 | INFO     | all workflow threads have been joined
[2026-02-10 15:54:39] 2026-02-10 20:54:25,190 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-10 15:54:39] 2026-02-10 20:54:25,190 | INFO     | traces error code: 0
[2026-02-10 15:54:39] 2026-02-10 20:54:25,190 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-10 15:54:39] 2026-02-10 20:54:39,097 | INFO     | PID=8451 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-10 15:54:39] 2026-02-10 20:54:39,097 | INFO     | .. there are 3 such processes running
[2026-02-10 15:54:39] 2026-02-10 20:54:39,098 | INFO     | found 0 job(s) in 20 queues
[2026-02-10 15:54:39] 2026-02-10 20:54:39,098 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-10 15:54:39] 2026-02-10 20:54:39,098 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-10 15:54:39] 2026-02-10 20:54:39,098 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-10 15:54:39] 2026-02-10 20:54:39,098 | INFO     | [monitor] control thread has ended
[2026-02-10 15:54:39] 2026-02-10 20:54:39,206 [wrapper] ==== pilot stdout END ====
[2026-02-10 15:54:39] 2026-02-10 20:54:39,208 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-10 15:54:39] 2026-02-10 20:54:39,210 [wrapper] pilotpid: 8451
[2026-02-10 15:54:39] 2026-02-10 20:54:39,212 [wrapper] Pilot exit status: 0
[2026-02-10 15:54:39] 2026-02-10 20:54:39,218 [wrapper] pandaids: 7007445803
[2026-02-10 15:54:39] 2026-02-10 20:54:39,243 [wrapper] cleanup supervisor_pilot  9187 8452
[2026-02-10 15:54:39] 2026-02-10 20:54:39,245 [wrapper] Test setup, not cleaning
[2026-02-10 15:54:39] 2026-02-10 20:54:39,247 [wrapper] apfmon messages muted
[2026-02-10 15:54:39] 2026-02-10 20:54:39,249 [wrapper] ==== wrapper stdout END ====
[2026-02-10 15:54:39] 2026-02-10 20:54:39,251 [wrapper] ==== wrapper stderr END ====
[2026-02-10 15:54:39]  *** Error codes and diagnostics ***
[2026-02-10 15:54:39]     "exeErrorCode": 0,
[2026-02-10 15:54:39]     "exeErrorDiag": "",
[2026-02-10 15:54:39]     "pilotErrorCode": 0,
[2026-02-10 15:54:39]     "pilotErrorDiag": "",
[2026-02-10 15:54:39]  *** Listing of results directory ***
[2026-02-10 15:54:39] total 667620
[2026-02-10 15:54:39] -rw-r--r-- 1 boincer umatlas    584627 Feb 10 05:23 pilot3.tar.gz
[2026-02-10 15:54:39] -rwx------ 1 boincer umatlas     36322 Feb 10 05:27 runpilot2-wrapper.sh
[2026-02-10 15:54:39] -rw-r--r-- 1 boincer umatlas      5111 Feb 10 05:29 queuedata.json
[2026-02-10 15:54:39] -rw-r--r-- 1 boincer umatlas       100 Feb 10 12:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-10 15:54:39] -rwxr-xr-x 1 boincer umatlas      7986 Feb 10 12:58 run_atlas
[2026-02-10 15:54:39] -rw-r--r-- 1 boincer umatlas       105 Feb 10 12:58 job.xml
[2026-02-10 15:54:39] -rw-r--r-- 2 boincer umatlas 496038052 Feb 10 12:58 EVNT.48442027._000149.pool.root.1
[2026-02-10 15:54:39] -rw-r--r-- 2 boincer umatlas     15845 Feb 10 12:58 start_atlas.sh
[2026-02-10 15:54:39] drwxrwx--x 2 boincer umatlas      4096 Feb 10 12:58 shared
[2026-02-10 15:54:39] -rw-r--r-- 2 boincer umatlas    597953 Feb 10 12:58 input.tar.gz
[2026-02-10 15:54:39] -rw-r--r-- 1 boincer umatlas         0 Feb 10 12:58 boinc_lockfile
[2026-02-10 15:54:39] -rw-r--r-- 1 boincer umatlas      2530 Feb 10 12:58 pandaJob.out
[2026-02-10 15:54:39] -rw------- 1 boincer umatlas        57 Feb 10 12:58 setup.sh.local
[2026-02-10 15:54:39] -rw------- 1 boincer umatlas   1009534 Feb 10 12:58 agis_schedconf.cvmfs.json
[2026-02-10 15:54:39] -rw------- 1 boincer umatlas   1512955 Feb 10 12:58 agis_ddmendpoints.agis.ALL.json
[2026-02-10 15:54:39] -rw------- 1 boincer umatlas       445 Feb 10 12:58 workernode_map.json
[2026-02-10 15:54:39] drwx------ 5 boincer umatlas      4096 Feb 10 12:58 pilot3
[2026-02-10 15:54:39] -rw-r--r-- 1 boincer umatlas      5951 Feb 10 15:47 init_data.xml
[2026-02-10 15:54:39] -rw------- 1 boincer umatlas 179811642 Feb 10 15:53 HITS.48442031._008648.pool.root.1
[2026-02-10 15:54:39] -rw-r--r-- 1 boincer umatlas       531 Feb 10 15:53 boinc_task_state.xml
[2026-02-10 15:54:39] -rw------- 1 boincer umatlas      1051 Feb 10 15:53 memory_monitor_summary.json
[2026-02-10 15:54:39] -rw------- 1 boincer umatlas    441870 Feb 10 15:54 log.48442031._008648.job.log.tgz.1
[2026-02-10 15:54:39] -rw------- 1 boincer umatlas      6419 Feb 10 15:54 heartbeat.json
[2026-02-10 15:54:39] -rw-r--r-- 1 boincer umatlas      8192 Feb 10 15:54 boinc_mmap_file
[2026-02-10 15:54:39] -rw-r--r-- 1 boincer umatlas        28 Feb 10 15:54 wrapper_checkpoint.txt
[2026-02-10 15:54:39] -rw------- 1 boincer umatlas       819 Feb 10 15:54 pilotlog.txt
[2026-02-10 15:54:39] -rw------- 1 boincer umatlas        95 Feb 10 15:54 pilot_heartbeat.json
[2026-02-10 15:54:39] -rw------- 1 boincer umatlas   1485138 Feb 10 15:54 log.48442031._008648.job.log.1
[2026-02-10 15:54:39] -rw------- 1 boincer umatlas       357 Feb 10 15:54 output.list
[2026-02-10 15:54:39] -rw-r--r-- 1 boincer umatlas       620 Feb 10 15:54 runtime_log
[2026-02-10 15:54:39] -rw------- 1 boincer umatlas   1945600 Feb 10 15:54 result.tar.gz
[2026-02-10 15:54:39] -rw-r--r-- 1 boincer umatlas      9342 Feb 10 15:54 runtime_log.err
[2026-02-10 15:54:39] -rw------- 1 boincer umatlas       659 Feb 10 15:54 lPALDmG9z98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDml4hKDml1nP0m.diag
[2026-02-10 15:54:39] -rw-r--r-- 1 boincer umatlas     21403 Feb 10 15:54 stderr.txt
[2026-02-10 15:54:39] HITS file was successfully produced:
[2026-02-10 15:54:39] -rw------- 1 boincer umatlas 179811642 Feb 10 15:53 shared/HITS.pool.root.1
[2026-02-10 15:54:39]  *** Contents of shared directory: ***
[2026-02-10 15:54:39] total 662520
[2026-02-10 15:54:39] -rw-r--r-- 2 boincer umatlas 496038052 Feb 10 12:58 ATLAS.root_0
[2026-02-10 15:54:39] -rw-r--r-- 2 boincer umatlas     15845 Feb 10 12:58 start_atlas.sh
[2026-02-10 15:54:39] -rw-r--r-- 2 boincer umatlas    597953 Feb 10 12:58 input.tar.gz
[2026-02-10 15:54:39] -rw------- 1 boincer umatlas 179811642 Feb 10 15:53 HITS.pool.root.1
[2026-02-10 15:54:39] -rw------- 1 boincer umatlas   1945600 Feb 10 15:54 result.tar.gz
15:54:40 (4478): run_atlas exited; CPU time 79062.313091
15:54:40 (4478): called boinc_finish(0)

</stderr_txt>
]]>

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