Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:56:09 (573846): wrapper (7.7.26015): starting
12:56:09 (573846): wrapper: running run_atlas (--nthreads 10)
[2026-02-10 12:56:09] Arguments: --nthreads 10
[2026-02-10 12:56:09] Threads: 10
[2026-02-10 12:56:09] Checking for CVMFS
[2026-02-10 12:56:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 12:56:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 12:56:09] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 12:56:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 12:56:30] 2.13.3.0 8993 60601 199844 156089 1 789 27540756 40960000 33740 16776704 0 356883065 99.779 261247797 48703 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-10 12:56:30] CVMFS is ok
[2026-02-10 12:56:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-10 12:56:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-10 12:56:30] Further information can be found at the LHC@home message board.
[2026-02-10 12:56:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 12:56:30] Checking for apptainer binary...
[2026-02-10 12:56:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 12:56:30] Running /usr/bin/apptainer --version
[2026-02-10 12:56:30] apptainer version 1.4.5-2.el9
[2026-02-10 12:56:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 12:56:31] c-208-40.aglt2.org
[2026-02-10 12:56:31] apptainer works
[2026-02-10 12:56:31] Set ATHENA_PROC_NUMBER=10
[2026-02-10 12:56:31] Set ATHENA_CORE_NUMBER=10
[2026-02-10 12:56:31] Starting ATLAS job with PandaID=7007445917
[2026-02-10 12:56:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-10 15:57:20]  *** The last 200 lines of the pilot log: ***
[2026-02-10 15:57:20] 2026-02-10 20:56:37,597 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-10 15:57:20] 2026-02-10 20:56:37,597 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-10 15:57:20] 2026-02-10 20:56:37,597 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-10 15:57:20] 2026-02-10 20:56:37,599 | INFO     | fitting pss+swap vs Time
[2026-02-10 15:57:20] 2026-02-10 20:56:37,615 | INFO     | sum of square deviations: 1661760301.4285662
[2026-02-10 15:57:20] 2026-02-10 20:56:37,616 | INFO     | sum of deviations: 40507188850.428505
[2026-02-10 15:57:20] 2026-02-10 20:56:37,616 | INFO     | mean x: 1770751656.057143
[2026-02-10 15:57:20] 2026-02-10 20:56:37,616 | INFO     | mean y: 2590550.8571428573
[2026-02-10 15:57:20] 2026-02-10 20:56:37,616 | INFO     | intersect: -43161379413.67573
[2026-02-10 15:57:20] 2026-02-10 20:56:37,616 | INFO     | chi2: 3.4103059448232047
[2026-02-10 15:57:20] 2026-02-10 20:56:37,616 | INFO     | sum of square deviations: 1523351453.9117587
[2026-02-10 15:57:20] 2026-02-10 20:56:37,617 | INFO     | sum of deviations: 51572891954.64705
[2026-02-10 15:57:20] 2026-02-10 20:56:37,617 | INFO     | mean x: 1770751503.5588236
[2026-02-10 15:57:20] 2026-02-10 20:56:37,617 | INFO     | mean y: 2602415.8352941177
[2026-02-10 15:57:20] 2026-02-10 20:56:37,617 | INFO     | intersect: -59945990364.29013
[2026-02-10 15:57:20] 2026-02-10 20:56:37,617 | INFO     | chi2: 2.5941123330170694
[2026-02-10 15:57:20] 2026-02-10 20:56:37,617 | INFO     | current chi2=2.5941123330170694 (change=23.9331492543977 %)
[2026-02-10 15:57:20] 2026-02-10 20:56:37,617 | INFO     | right removable region: 169
[2026-02-10 15:57:20] 2026-02-10 20:56:37,617 | INFO     | sum of square deviations: 1523345353.9117587
[2026-02-10 15:57:20] 2026-02-10 20:56:37,618 | INFO     | sum of deviations: -3307781414.294121
[2026-02-10 15:57:20] 2026-02-10 20:56:37,618 | INFO     | mean x: 1770751808.5588236
[2026-02-10 15:57:20] 2026-02-10 20:56:37,618 | INFO     | mean y: 2638478.9294117647
[2026-02-10 15:57:20] 2026-02-10 20:56:37,618 | INFO     | intersect: 3847636533.1381135
[2026-02-10 15:57:20] 2026-02-10 20:56:37,618 | INFO     | chi2: 0.8985850936262068
[2026-02-10 15:57:20] 2026-02-10 20:56:37,618 | INFO     | current chi2=0.8985850936262068 (change=73.65089501749114 %)
[2026-02-10 15:57:20] 2026-02-10 20:56:37,618 | INFO     | sum of square deviations: 1392837531.3939378
[2026-02-10 15:57:20] 2026-02-10 20:56:37,619 | INFO     | sum of deviations: -7954151292.424242
[2026-02-10 15:57:20] 2026-02-10 20:56:37,619 | INFO     | mean x: 1770751961.060606
[2026-02-10 15:57:20] 2026-02-10 20:56:37,619 | INFO     | mean y: 2643840.8424242423
[2026-02-10 15:57:20] 2026-02-10 20:56:37,619 | INFO     | intersect: 10114971145.47574
[2026-02-10 15:57:20] 2026-02-10 20:56:37,639 | INFO     | chi2: 0.8609611122570303
[2026-02-10 15:57:20] 2026-02-10 20:56:37,639 | INFO     | current chi2=0.8609611122570303 (change=4.1870248723297046 %)
[2026-02-10 15:57:20] 2026-02-10 20:56:37,639 | INFO     | left removable region: 20
[2026-02-10 15:57:20] 2026-02-10 20:56:37,639 | INFO     | sum of square deviations: 1025666573.5704689
[2026-02-10 15:57:20] 2026-02-10 20:56:37,640 | INFO     | sum of deviations: 2020123905.9395974
[2026-02-10 15:57:20] 2026-02-10 20:56:37,640 | INFO     | mean x: 1770752083.0536914
[2026-02-10 15:57:20] 2026-02-10 20:56:37,640 | INFO     | mean y: 2660337.3825503355
[2026-02-10 15:57:20] 2026-02-10 20:56:37,640 | INFO     | intersect: -3484962937.710301
[2026-02-10 15:57:20] 2026-02-10 20:56:37,640 | INFO     | chi2: 0.0014406260842996822
[2026-02-10 15:57:20] 2026-02-10 20:56:37,640 | INFO     | current memory leak: 1.97 B/s (using 149 data points, chi2=0.00)
[2026-02-10 15:57:20] 2026-02-10 20:56:37,640 | INFO     | could have reported an average CPU frequency of 3800 MHz (9 samples)
[2026-02-10 15:57:20] 2026-02-10 20:56:37,640 | INFO     | ..............................
[2026-02-10 15:57:20] 2026-02-10 20:56:37,640 | INFO     | . Timing measurements:
[2026-02-10 15:57:20] 2026-02-10 20:56:37,641 | INFO     | . get job = 0 s
[2026-02-10 15:57:20] 2026-02-10 20:56:37,641 | INFO     | . initial setup = 34 s
[2026-02-10 15:57:20] 2026-02-10 20:56:37,641 | INFO     | . payload setup = 36 s
[2026-02-10 15:57:20] 2026-02-10 20:56:37,641 | INFO     | . stage-in = 0 s
[2026-02-10 15:57:20] 2026-02-10 20:56:37,641 | INFO     | . payload execution = 10667 s
[2026-02-10 15:57:20] 2026-02-10 20:56:37,641 | INFO     | . stage-out = 1 s
[2026-02-10 15:57:20] 2026-02-10 20:56:37,641 | INFO     | . log creation = 0 s
[2026-02-10 15:57:20] 2026-02-10 20:56:37,641 | INFO     | ..............................
[2026-02-10 15:57:20] 2026-02-10 20:56:37,905 | INFO     | 
[2026-02-10 15:57:20] 2026-02-10 20:56:37,905 | INFO     | job summary report
[2026-02-10 15:57:20] 2026-02-10 20:56:37,905 | INFO     | --------------------------------------------------
[2026-02-10 15:57:20] 2026-02-10 20:56:37,905 | INFO     | PanDA job id: 7007445917
[2026-02-10 15:57:20] 2026-02-10 20:56:37,905 | INFO     | task id: 48442031
[2026-02-10 15:57:20] 2026-02-10 20:56:37,905 | INFO     | errors: (none)
[2026-02-10 15:57:20] 2026-02-10 20:56:37,905 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-10 15:57:20] 2026-02-10 20:56:37,905 | INFO     | pilot state: finished 
[2026-02-10 15:57:20] 2026-02-10 20:56:37,905 | INFO     | transexitcode: 0
[2026-02-10 15:57:20] 2026-02-10 20:56:37,905 | INFO     | exeerrorcode: 0
[2026-02-10 15:57:20] 2026-02-10 20:56:37,905 | INFO     | exeerrordiag: 
[2026-02-10 15:57:20] 2026-02-10 20:56:37,905 | INFO     | exitcode: 0
[2026-02-10 15:57:20] 2026-02-10 20:56:37,905 | INFO     | exitmsg: OK
[2026-02-10 15:57:20] 2026-02-10 20:56:37,905 | INFO     | cpuconsumptiontime: 22864 s
[2026-02-10 15:57:20] 2026-02-10 20:56:37,905 | INFO     | nevents: 400
[2026-02-10 15:57:20] 2026-02-10 20:56:37,905 | INFO     | neventsw: 0
[2026-02-10 15:57:20] 2026-02-10 20:56:37,905 | INFO     | pid: 601965
[2026-02-10 15:57:20] 2026-02-10 20:56:37,905 | INFO     | pgrp: 601965
[2026-02-10 15:57:20] 2026-02-10 20:56:37,906 | INFO     | corecount: 10
[2026-02-10 15:57:20] 2026-02-10 20:56:37,906 | INFO     | event service: False
[2026-02-10 15:57:20] 2026-02-10 20:56:37,906 | INFO     | sizes: {0: 2281083, 1: 2282201, 12: 2282201, 10707: 2310958, 10708: 2310957, 10709: 2320011, 10712: 2320453}
[2026-02-10 15:57:20] 2026-02-10 20:56:37,906 | INFO     | --------------------------------------------------
[2026-02-10 15:57:20] 2026-02-10 20:56:37,906 | INFO     | 
[2026-02-10 15:57:20] 2026-02-10 20:56:37,906 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-02-10 15:57:20] 2026-02-10 20:56:37,920 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-10 15:57:20] 2026-02-10 20:56:37,921 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-10 15:57:20] 2026-02-10 20:56:37,921 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-10 15:57:20] 2026-02-10 20:56:37,921 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-10 15:57:20] 2026-02-10 20:56:37,921 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-10 15:57:20] 2026-02-10 20:56:37,921 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-10 15:57:20] 2026-02-10 20:56:37,921 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-10 15:57:20] 2026-02-10 20:56:37,921 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-10 15:57:20] 2026-02-10 20:56:37,921 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-10 15:57:20] 2026-02-10 20:56:37,921 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-10 15:57:20] 2026-02-10 20:56:37,921 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-10 15:57:20] 2026-02-10 20:56:37,921 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-10 15:57:20] 2026-02-10 20:56:37,921 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-10 15:57:20] 2026-02-10 20:56:37,921 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-10 15:57:20] 2026-02-10 20:56:37,921 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-10 15:57:20] 2026-02-10 20:56:37,921 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-10 15:57:20] 2026-02-10 20:56:37,921 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-10 15:57:20] 2026-02-10 20:56:37,921 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-10 15:57:20] 2026-02-10 20:56:37,921 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-10 15:57:20] 2026-02-10 20:56:37,921 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-10 15:57:20] 2026-02-10 20:56:37,921 | INFO     | job 7007445917 has completed (purged errors)
[2026-02-10 15:57:20] 2026-02-10 20:56:37,922 | INFO     | overall cleanup function is called
[2026-02-10 15:57:20] 2026-02-10 20:56:38,247 | WARNING  | process 601965 can no longer be monitored (due to stat problems) - aborting
[2026-02-10 15:57:20] 2026-02-10 20:56:38,801 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 15:57:20] 2026-02-10 20:56:38,802 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 15:57:20] 2026-02-10 20:56:38,802 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-10 15:57:20] 2026-02-10 20:56:38,802 | WARNING  | maxPSS not found in memory monitor output
[2026-02-10 15:57:20] 2026-02-10 20:56:38,802 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/1/PanDA_Pilot-7007445917/payload.stdout) since it has not been created yet
[2026-02-10 15:57:20] 2026-02-10 20:56:38,802 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-02-10 15:57:20] 2026-02-10 20:56:38,818 | INFO     | sufficient remaining disk space (166217121792 B)
[2026-02-10 15:57:20] 2026-02-10 20:56:38,819 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-10 15:57:20] 2026-02-10 20:56:38,819 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-7007445917/HITS.48442031._008762.pool.root.1 since it does not exist
[2026-02-10 15:57:20] 2026-02-10 20:56:38,929 | INFO     | --- collectZombieJob: --- 10, [601965]
[2026-02-10 15:57:20] 2026-02-10 20:56:38,929 | INFO     | zombie collector waiting for pid 601965
[2026-02-10 15:57:20] 2026-02-10 20:56:38,933 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-10 15:57:20] 2026-02-10 20:56:38,941 | INFO     | collected zombie processes
[2026-02-10 15:57:20] 2026-02-10 20:56:38,945 | INFO     | will attempt to kill all subprocesses of pid=601965
[2026-02-10 15:57:20] 2026-02-10 20:56:39,714 | INFO     | number of running child processes to parent process 601965: 1
[2026-02-10 15:57:20] 2026-02-10 20:56:39,715 | INFO     | maximum number of monitored processes: 6
[2026-02-10 15:57:20] 2026-02-10 20:56:39,715 | INFO     | aborting job monitoring since job object (job id=7007445917) has expired
[2026-02-10 15:57:20] 2026-02-10 20:56:39,842 | INFO     | process IDs to be killed: [601965] (in reverse order)
[2026-02-10 15:57:20] 2026-02-10 20:56:40,130 | WARNING  | found no corresponding commands to process id(s)
[2026-02-10 15:57:20] 2026-02-10 20:56:40,130 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-10 15:57:20] 2026-02-10 20:56:40,153 | INFO     | did not find any defunct processes belonging to 601965
[2026-02-10 15:57:20] 2026-02-10 20:56:40,175 | INFO     | did not find any defunct processes belonging to 601965
[2026-02-10 15:57:20] 2026-02-10 20:56:40,175 | INFO     | ready for new job
[2026-02-10 15:57:20] 2026-02-10 20:56:40,175 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-10 15:57:20] 2026-02-10 20:56:40,177 | INFO     | **************************************
[2026-02-10 15:57:20] 2026-02-10 20:56:40,177 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-10 15:57:20] 2026-02-10 20:56:40,177 | INFO     | **************************************
[2026-02-10 15:57:20] 2026-02-10 20:56:40,177 | INFO     | 
[2026-02-10 15:57:20] 2026-02-10 20:56:40,182 | INFO     | architecture information:
[2026-02-10 15:57:20] 2026-02-10 20:56:40,182 | INFO     | executing command: cat /etc/os-release
[2026-02-10 15:57:20] 2026-02-10 20:56:40,335 | INFO     | cat /etc/os-release:
[2026-02-10 15:57:20] NAME="CentOS Linux"
[2026-02-10 15:57:20] VERSION="7 (Core)"
[2026-02-10 15:57:20] ID="centos"
[2026-02-10 15:57:20] ID_LIKE="rhel fedora"
[2026-02-10 15:57:20] VERSION_ID="7"
[2026-02-10 15:57:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-10 15:57:20] ANSI_COLOR="0;31"
[2026-02-10 15:57:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-10 15:57:20] HOME_URL="https://www.centos.org/"
[2026-02-10 15:57:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-10 15:57:20] 
[2026-02-10 15:57:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-10 15:57:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-10 15:57:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-10 15:57:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-10 15:57:20] 
[2026-02-10 15:57:20] 2026-02-10 20:56:40,335 | INFO     | **************************************
[2026-02-10 15:57:20] 2026-02-10 20:56:40,837 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-02-10 15:57:20] 2026-02-10 20:56:40,927 | INFO     | sufficient remaining disk space (166219218944 B)
[2026-02-10 15:57:20] 2026-02-10 20:56:40,927 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-10 15:57:20] 2026-02-10 20:56:40,927 | INFO     | current server update state: UPDATING_FINAL
[2026-02-10 15:57:20] 2026-02-10 20:56:40,927 | INFO     | update_server=False
[2026-02-10 15:57:20] 2026-02-10 20:56:40,927 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-10 15:57:20] 2026-02-10 20:56:40,928 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-10 15:57:20] 2026-02-10 20:56:40,928 | INFO     | aborting loop
[2026-02-10 15:57:20] 2026-02-10 20:56:40,929 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-10 15:57:20] 2026-02-10 20:56:41,109 | INFO     | all payload control threads have been joined
[2026-02-10 15:57:20] 2026-02-10 20:56:41,630 | INFO     | all job control threads have been joined
[2026-02-10 15:57:20] 2026-02-10 20:56:41,874 | INFO     | all data control threads have been joined
[2026-02-10 15:57:20] 2026-02-10 20:56:41,934 | INFO     | [job] job monitor thread has finished
[2026-02-10 15:57:20] 2026-02-10 20:56:41,935 | INFO     | [job] retrieve thread has finished
[2026-02-10 15:57:20] 2026-02-10 20:56:42,038 | INFO     | [data] copytool_in thread has finished
[2026-02-10 15:57:20] 2026-02-10 20:56:42,115 | INFO     | [payload] control thread has finished
[2026-02-10 15:57:20] 2026-02-10 20:56:42,171 | INFO     | [payload] failed_post thread has finished
[2026-02-10 15:57:20] 2026-02-10 20:56:42,383 | INFO     | [payload] validate_post thread has finished
[2026-02-10 15:57:20] 2026-02-10 20:56:42,385 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-10 15:57:20] 2026-02-10 20:56:42,412 | INFO     | [payload] validate_pre thread has finished
[2026-02-10 15:57:20] 2026-02-10 20:56:42,664 | INFO     | [job] control thread has finished
[2026-02-10 15:57:20] 2026-02-10 20:56:42,880 | INFO     | [data] control thread has finished
[2026-02-10 15:57:20] 2026-02-10 20:56:42,936 | INFO     | [data] copytool_out thread has finished
[2026-02-10 15:57:20] 2026-02-10 20:56:42,948 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-10 15:57:20] 2026-02-10 20:56:42,982 | INFO     | [payload] execute_payloads thread has finished
[2026-02-10 15:57:20] 2026-02-10 20:56:43,398 | INFO     | [job] create_data_payload thread has finished
[2026-02-10 15:57:20] 2026-02-10 20:56:43,413 | INFO     | [job] validate thread has finished
[2026-02-10 15:57:20] 2026-02-10 20:56:43,438 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-10 15:57:20] 2026-02-10 20:56:43,959 | INFO     | [job] queue monitor thread has finished
[2026-02-10 15:57:20] 2026-02-10 20:56:47,446 | INFO     | [data] queue_monitor thread has finished
[2026-02-10 15:57:20] 2026-02-10 20:57:11,112 | INFO     | PID=584964 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-10 15:57:20] 2026-02-10 20:57:11,112 | INFO     | .. there are 39 such processes running
[2026-02-10 15:57:20] 2026-02-10 20:57:11,113 | INFO     | found 0 job(s) in 20 queues
[2026-02-10 15:57:20] 2026-02-10 20:57:11,114 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-10 15:57:20] 2026-02-10 20:57:11,114 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-10 15:57:20] 2026-02-10 20:57:12,301 | INFO     | [monitor] cgroup control has ended
[2026-02-10 15:57:20] 2026-02-10 20:57:13,795 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140102214866752)>', '<ExcThread(monitor, started 140101732513536)>']
[2026-02-10 15:57:20] 2026-02-10 20:57:14,149 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-10 15:57:20] 2026-02-10 20:57:14,149 | INFO     | [monitor] control thread has ended
[2026-02-10 15:57:20] 2026-02-10 20:57:18,821 | INFO     | all workflow threads have been joined
[2026-02-10 15:57:20] 2026-02-10 20:57:18,821 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-10 15:57:20] 2026-02-10 20:57:18,822 | INFO     | traces error code: 0
[2026-02-10 15:57:20] 2026-02-10 20:57:18,822 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-10 15:57:20] 2026-02-10 20:57:19,253 [wrapper] supervise_pilot (15 min periods counter: 13)
[2026-02-10 15:57:20] 2026-02-10 20:57:19,939 [wrapper] ==== pilot stdout END ====
[2026-02-10 15:57:20] 2026-02-10 20:57:19,942 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-10 15:57:20] 2026-02-10 20:57:19,947 [wrapper] pilotpid: 584964
[2026-02-10 15:57:20] 2026-02-10 20:57:19,949 [wrapper] Pilot exit status: 0
[2026-02-10 15:57:20] 2026-02-10 20:57:19,968 [wrapper] pandaids: 7007445917
[2026-02-10 15:57:20] 2026-02-10 20:57:20,105 [wrapper] cleanup supervisor_pilot 1603825 584965
[2026-02-10 15:57:20] 2026-02-10 20:57:20,115 [wrapper] Test setup, not cleaning
[2026-02-10 15:57:20] 2026-02-10 20:57:20,118 [wrapper] apfmon messages muted
[2026-02-10 15:57:20] 2026-02-10 20:57:20,121 [wrapper] ==== wrapper stdout END ====
[2026-02-10 15:57:20] 2026-02-10 20:57:20,127 [wrapper] ==== wrapper stderr END ====
[2026-02-10 15:57:20]  *** Error codes and diagnostics ***
[2026-02-10 15:57:20]     "exeErrorCode": 0,
[2026-02-10 15:57:20]     "exeErrorDiag": "",
[2026-02-10 15:57:20]     "pilotErrorCode": 0,
[2026-02-10 15:57:20]     "pilotErrorDiag": "",
[2026-02-10 15:57:20]  *** Listing of results directory ***
[2026-02-10 15:57:20] total 672132
[2026-02-10 15:57:20] -rw-r--r--. 1 boincer umatlas    584627 Feb 10 05:23 pilot3.tar.gz
[2026-02-10 15:57:20] -rwx------. 1 boincer umatlas     36322 Feb 10 05:27 runpilot2-wrapper.sh
[2026-02-10 15:57:20] -rw-r--r--. 1 boincer umatlas      5111 Feb 10 05:29 queuedata.json
[2026-02-10 15:57:20] -rw-r--r--. 1 boincer umatlas       100 Feb 10 12:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-10 15:57:20] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 10 12:56 run_atlas
[2026-02-10 15:57:20] -rw-r--r--. 1 boincer umatlas       105 Feb 10 12:56 job.xml
[2026-02-10 15:57:20] -rw-r--r--. 2 boincer umatlas 494959114 Feb 10 12:56 EVNT.48442027._000152.pool.root.1
[2026-02-10 15:57:20] -rw-r--r--. 2 boincer umatlas     15845 Feb 10 12:56 start_atlas.sh
[2026-02-10 15:57:20] drwxrwx--x. 2 boincer umatlas      4096 Feb 10 12:56 shared
[2026-02-10 15:57:20] -rw-r--r--. 2 boincer umatlas    597957 Feb 10 12:56 input.tar.gz
[2026-02-10 15:57:20] -rw-r--r--. 1 boincer umatlas         0 Feb 10 12:56 boinc_lockfile
[2026-02-10 15:57:20] -rw-r--r--. 1 boincer umatlas      2529 Feb 10 12:56 pandaJob.out
[2026-02-10 15:57:20] -rw-------. 1 boincer umatlas        57 Feb 10 12:56 setup.sh.local
[2026-02-10 15:57:20] -rw-------. 1 boincer umatlas   1009534 Feb 10 12:57 agis_schedconf.cvmfs.json
[2026-02-10 15:57:20] -rw-------. 1 boincer umatlas   1512955 Feb 10 12:57 agis_ddmendpoints.agis.ALL.json
[2026-02-10 15:57:20] -rw-------. 1 boincer umatlas       432 Feb 10 12:57 workernode_map.json
[2026-02-10 15:57:20] drwx------. 5 boincer umatlas      4096 Feb 10 12:57 pilot3
[2026-02-10 15:57:20] -rw-r--r--. 1 boincer umatlas      7185 Feb 10 15:46 init_data.xml
[2026-02-10 15:57:20] -rw-------. 1 boincer umatlas 185854376 Feb 10 15:55 HITS.48442031._008762.pool.root.1
[2026-02-10 15:57:20] -rw-r--r--. 1 boincer umatlas       531 Feb 10 15:55 boinc_task_state.xml
[2026-02-10 15:57:20] -rw-------. 1 boincer umatlas      1049 Feb 10 15:56 memory_monitor_summary.json
[2026-02-10 15:57:20] -rw-------. 1 boincer umatlas    423208 Feb 10 15:56 log.48442031._008762.job.log.tgz.1
[2026-02-10 15:57:20] -rw-------. 1 boincer umatlas      6363 Feb 10 15:56 heartbeat.json
[2026-02-10 15:57:20] -rw-------. 1 boincer umatlas        95 Feb 10 15:57 pilot_heartbeat.json
[2026-02-10 15:57:20] -rw-------. 1 boincer umatlas      4820 Feb 10 15:57 pilotlog.txt
[2026-02-10 15:57:20] -rw-r--r--. 1 boincer umatlas      8192 Feb 10 15:57 boinc_mmap_file
[2026-02-10 15:57:20] -rw-r--r--. 1 boincer umatlas        27 Feb 10 15:57 wrapper_checkpoint.txt
[2026-02-10 15:57:20] -rw-------. 1 boincer umatlas   1326928 Feb 10 15:57 log.48442031._008762.job.log.1
[2026-02-10 15:57:20] -rw-------. 1 boincer umatlas       357 Feb 10 15:57 output.list
[2026-02-10 15:57:20] -rw-r--r--. 1 boincer umatlas       620 Feb 10 15:57 runtime_log
[2026-02-10 15:57:20] -rw-------. 1 boincer umatlas   1771520 Feb 10 15:57 result.tar.gz
[2026-02-10 15:57:20] -rw-r--r--. 1 boincer umatlas      9344 Feb 10 15:57 runtime_log.err
[2026-02-10 15:57:20] -rw-------. 1 boincer umatlas       658 Feb 10 15:57 HBGMDmT9z98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDma5hKDmwGpgOo.diag
[2026-02-10 15:57:20] -rw-r--r--. 1 boincer umatlas     21531 Feb 10 15:57 stderr.txt
[2026-02-10 15:57:20] HITS file was successfully produced:
[2026-02-10 15:57:20] -rw-------. 1 boincer umatlas 185854376 Feb 10 15:55 shared/HITS.pool.root.1
[2026-02-10 15:57:20]  *** Contents of shared directory: ***
[2026-02-10 15:57:20] total 667200
[2026-02-10 15:57:20] -rw-r--r--. 2 boincer umatlas 494959114 Feb 10 12:56 ATLAS.root_0
[2026-02-10 15:57:20] -rw-r--r--. 2 boincer umatlas     15845 Feb 10 12:56 start_atlas.sh
[2026-02-10 15:57:20] -rw-r--r--. 2 boincer umatlas    597957 Feb 10 12:56 input.tar.gz
[2026-02-10 15:57:20] -rw-------. 1 boincer umatlas 185854376 Feb 10 15:55 HITS.pool.root.1
[2026-02-10 15:57:20] -rw-------. 1 boincer umatlas   1771520 Feb 10 15:57 result.tar.gz
15:57:22 (573846): run_atlas exited; CPU time 23251.216736
15:57:22 (573846): called boinc_finish(0)

</stderr_txt>
]]>

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