Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:02:12 (540967): wrapper (7.7.26015): starting
11:02:12 (540967): wrapper: running run_atlas (--nthreads 4)
[2026-02-11 11:02:12] Arguments: --nthreads 4
[2026-02-11 11:02:12] Threads: 4
[2026-02-11 11:02:12] Checking for CVMFS
[2026-02-11 11:02:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 11:02:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 11:02:13] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 11:02:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 11:02:13] 2.9.2.0 3607414 6421 98604 156110 3 50 25560236 36864001 0 130560 0 2999517 99.986 207960 11094 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-11 11:02:13] CVMFS is ok
[2026-02-11 11:02:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-11 11:02:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-11 11:02:13] Further information can be found at the LHC@home message board.
[2026-02-11 11:02:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 11:02:13] Checking for apptainer binary...
[2026-02-11 11:02:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-11 11:02:13] Running /usr/bin/apptainer --version
[2026-02-11 11:02:13] apptainer version 1.4.1-1.1
[2026-02-11 11:02:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 11:02:13] thA309
[2026-02-11 11:02:13] apptainer works
[2026-02-11 11:02:13] Set ATHENA_PROC_NUMBER=4
[2026-02-11 11:02:13] Set ATHENA_CORE_NUMBER=4
[2026-02-11 11:02:13] Starting ATLAS job with PandaID=7007871526
[2026-02-11 11:02:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-11 12:42:38]  *** The last 200 lines of the pilot log: ***
[2026-02-11 12:42:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-11 12:42:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-11 12:42:38] 
[2026-02-11 12:42:38] 2026-02-11 11:41:53,722 | INFO     | **************************************
[2026-02-11 12:42:38] 2026-02-11 11:41:54,226 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-11 12:42:38] 2026-02-11 11:41:54,244 | INFO     | sufficient remaining disk space (229482954752 B)
[2026-02-11 12:42:38] 2026-02-11 11:41:54,244 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-11 12:42:38] 2026-02-11 11:41:54,244 | INFO     | current server update state: UPDATING_FINAL
[2026-02-11 12:42:38] 2026-02-11 11:41:54,244 | INFO     | update_server=False
[2026-02-11 12:42:38] 2026-02-11 11:41:54,244 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-11 12:42:38] 2026-02-11 11:41:54,245 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-11 12:42:38] 2026-02-11 11:41:54,690 | INFO     | all data control threads have been joined
[2026-02-11 12:42:38] 2026-02-11 11:41:54,695 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-11 12:42:38] 2026-02-11 11:41:54,695 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-11 12:42:38] 2026-02-11 11:41:54,695 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-11 12:42:38] 2026-02-11 11:41:54,695 | INFO     | will abort loop
[2026-02-11 12:42:38] 2026-02-11 11:41:54,752 | INFO     | all job control threads have been joined
[2026-02-11 12:42:38] 2026-02-11 11:41:54,756 | INFO     | all payload control threads have been joined
[2026-02-11 12:42:38] 2026-02-11 11:41:54,855 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-11 12:42:38] 2026-02-11 11:41:55,250 | INFO     | [job] queue monitor thread has finished
[2026-02-11 12:42:38] 2026-02-11 11:41:55,250 | INFO     | [job] retrieve thread has finished
[2026-02-11 12:42:38] 2026-02-11 11:41:55,347 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-11 12:42:38] 2026-02-11 11:41:55,607 | INFO     | [payload] failed_post thread has finished
[2026-02-11 12:42:38] 2026-02-11 11:41:55,696 | INFO     | [data] control thread has finished
[2026-02-11 12:42:38] 2026-02-11 11:41:55,701 | INFO     | [job] job monitor thread has finished
[2026-02-11 12:42:38] 2026-02-11 11:41:55,757 | INFO     | [job] control thread has finished
[2026-02-11 12:42:38] 2026-02-11 11:41:55,762 | INFO     | [payload] control thread has finished
[2026-02-11 12:42:38] 2026-02-11 11:41:55,979 | INFO     | [job] validate thread has finished
[2026-02-11 12:42:38] 2026-02-11 11:41:56,044 | INFO     | [job] create_data_payload thread has finished
[2026-02-11 12:42:38] 2026-02-11 11:41:56,230 | INFO     | [payload] validate_pre thread has finished
[2026-02-11 12:42:38] 2026-02-11 11:41:56,257 | INFO     | [payload] execute_payloads thread has finished
[2026-02-11 12:42:38] 2026-02-11 11:41:56,361 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-11 12:42:38] 2026-02-11 11:41:56,401 | INFO     | [data] copytool_in thread has finished
[2026-02-11 12:42:38] 2026-02-11 11:41:56,802 | INFO     | [payload] validate_post thread has finished
[2026-02-11 12:42:38] 2026-02-11 11:41:56,862 | INFO     | [data] copytool_out thread has finished
[2026-02-11 12:42:38] 2026-02-11 11:42:00,368 | INFO     | [data] queue_monitor thread has finished
[2026-02-11 12:42:38] 2026-02-11 11:42:24,099 | INFO     | PID=545082 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-11 12:42:38] 2026-02-11 11:42:24,099 | INFO     | found 0 job(s) in 20 queues
[2026-02-11 12:42:38] 2026-02-11 11:42:24,099 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-11 12:42:38] 2026-02-11 11:42:24,099 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-11 12:42:38] 2026-02-11 11:42:32,484 | INFO     | [monitor] cgroup control has ended
[2026-02-11 12:42:38] 2026-02-11 11:42:33,281 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139852453226304)>', '<ExcThread(monitor, started 139851408058112)>']
[2026-02-11 12:42:38] 2026-02-11 11:42:34,153 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-11 12:42:38] 2026-02-11 11:42:34,153 | INFO     | [monitor] control thread has ended
[2026-02-11 12:42:38] 2026-02-11 11:42:38,307 | INFO     | all workflow threads have been joined
[2026-02-11 12:42:38] 2026-02-11 11:42:38,307 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-11 12:42:38] 2026-02-11 11:42:38,307 | INFO     | traces error code: 0
[2026-02-11 12:42:38] 2026-02-11 11:42:38,307 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-11 12:42:38] 2026-02-11 11:42:38,390 [wrapper] ==== pilot stdout END ====
[2026-02-11 12:42:38] 2026-02-11 11:42:38,394 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-11 12:42:38] 2026-02-11 11:42:38,398 [wrapper] pilotpid: 545082
[2026-02-11 12:42:38] 2026-02-11 11:42:38,402 [wrapper] Pilot exit status: 0
[2026-02-11 12:42:38] 2026-02-11 11:42:38,414 [wrapper] pandaids: 7007871526
[2026-02-11 12:42:38] 2026-02-11 11:42:38,439 [wrapper] cleanup supervisor_pilot  555990 545083
[2026-02-11 12:42:38] 2026-02-11 11:42:38,443 [wrapper] Test setup, not cleaning
[2026-02-11 12:42:38] 2026-02-11 11:42:38,447 [wrapper] apfmon messages muted
[2026-02-11 12:42:38] 2026-02-11 11:42:38,451 [wrapper] ==== wrapper stdout END ====
[2026-02-11 12:42:38] 2026-02-11 11:42:38,455 [wrapper] ==== wrapper stderr END ====
[2026-02-11 12:42:38]  *** Error codes and diagnostics ***
[2026-02-11 12:42:38]     "exeErrorCode": 0,
[2026-02-11 12:42:38]     "exeErrorDiag": "",
[2026-02-11 12:42:38]     "pilotErrorCode": 0,
[2026-02-11 12:42:38]     "pilotErrorDiag": "",
[2026-02-11 12:42:38]  *** Listing of results directory ***
[2026-02-11 12:42:38] total 896292
[2026-02-11 12:42:38] -rw-r--r-- 1 boinc boinc    584627 Feb 10 18:05 pilot3.tar.gz
[2026-02-11 12:42:38] -rwx------ 1 boinc boinc     36322 Feb 10 18:05 runpilot2-wrapper.sh
[2026-02-11 12:42:38] -rw-r--r-- 1 boinc boinc      5111 Feb 10 18:07 queuedata.json
[2026-02-11 12:42:38] -rw-r--r-- 1 boinc boinc       100 Feb 11 11:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-11 12:42:38] -rwxr-xr-x 1 boinc boinc      7986 Feb 11 11:02 run_atlas
[2026-02-11 12:42:38] -rw-r--r-- 1 boinc boinc       105 Feb 11 11:02 job.xml
[2026-02-11 12:42:38] -rw-r--r-- 2 boinc boinc 651472471 Feb 11 11:02 EVNT.48431111._000197.pool.root.1
[2026-02-11 12:42:38] -rw-r--r-- 2 boinc boinc    597953 Feb 11 11:02 input.tar.gz
[2026-02-11 12:42:38] -rw-r--r-- 2 boinc boinc     15845 Feb 11 11:02 start_atlas.sh
[2026-02-11 12:42:38] drwxrwx--x 2 boinc boinc      4096 Feb 11 11:02 shared
[2026-02-11 12:42:38] -rw-r--r-- 1 boinc boinc         0 Feb 11 11:02 boinc_setup_complete
[2026-02-11 12:42:38] -rw-r--r-- 1 boinc boinc      6377 Feb 11 11:02 init_data.xml
[2026-02-11 12:42:38] -rw-r--r-- 1 boinc boinc         0 Feb 11 11:02 boinc_lockfile
[2026-02-11 12:42:38] -rw-r--r-- 1 boinc boinc      2545 Feb 11 11:02 pandaJob.out
[2026-02-11 12:42:38] -rw------- 1 boinc boinc   1009657 Feb 11 11:02 agis_schedconf.cvmfs.json
[2026-02-11 12:42:38] -rw------- 1 boinc boinc   1512955 Feb 11 11:02 agis_ddmendpoints.agis.ALL.json
[2026-02-11 12:42:38] -rw------- 1 boinc boinc       426 Feb 11 11:02 workernode_map.json
[2026-02-11 12:42:38] drwx------ 5 boinc boinc      4096 Feb 11 11:02 pilot3
[2026-02-11 12:42:38] -rw------- 1 boinc boinc 260038493 Feb 11 12:41 HITS.48431113._010145.pool.root.1
[2026-02-11 12:42:38] -rw-r--r-- 1 boinc boinc       530 Feb 11 12:41 boinc_task_state.xml
[2026-02-11 12:42:38] -rw------- 1 boinc boinc      1020 Feb 11 12:41 memory_monitor_summary.json
[2026-02-11 12:42:38] -rw------- 1 boinc boinc    320011 Feb 11 12:41 log.48431113._010145.job.log.tgz.1
[2026-02-11 12:42:38] -rw------- 1 boinc boinc      6306 Feb 11 12:41 heartbeat.json
[2026-02-11 12:42:38] -rw------- 1 boinc boinc        95 Feb 11 12:42 pilot_heartbeat.json
[2026-02-11 12:42:38] -rw-r--r-- 1 boinc boinc      8192 Feb 11 12:42 boinc_mmap_file
[2026-02-11 12:42:38] -rw-r--r-- 1 boinc boinc        27 Feb 11 12:42 wrapper_checkpoint.txt
[2026-02-11 12:42:38] -rw------- 1 boinc boinc      4933 Feb 11 12:42 pilotlog.txt
[2026-02-11 12:42:38] -rw------- 1 boinc boinc    862787 Feb 11 12:42 log.48431113._010145.job.log.1
[2026-02-11 12:42:38] -rw------- 1 boinc boinc       357 Feb 11 12:42 output.list
[2026-02-11 12:42:38] -rw-r--r-- 1 boinc boinc       620 Feb 11 12:42 runtime_log
[2026-02-11 12:42:38] -rw------- 1 boinc boinc   1198080 Feb 11 12:42 result.tar.gz
[2026-02-11 12:42:38] -rw-r--r-- 1 boinc boinc      8896 Feb 11 12:42 runtime_log.err
[2026-02-11 12:42:38] -rw------- 1 boinc boinc       657 Feb 11 12:42 0DiLDmEM698nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmYXiKDmIpyMFo.diag
[2026-02-11 12:42:38] -rw-r--r-- 1 boinc boinc      8322 Feb 11 12:42 stderr.txt
[2026-02-11 12:42:38] HITS file was successfully produced:
[2026-02-11 12:42:38] -rw------- 1 boinc boinc 260038493 Feb 11 12:41 shared/HITS.pool.root.1
[2026-02-11 12:42:38]  *** Contents of shared directory: ***
[2026-02-11 12:42:38] total 891928
[2026-02-11 12:42:38] -rw-r--r-- 2 boinc boinc 651472471 Feb 11 11:02 ATLAS.root_0
[2026-02-11 12:42:38] -rw-r--r-- 2 boinc boinc    597953 Feb 11 11:02 input.tar.gz
[2026-02-11 12:42:38] -rw-r--r-- 2 boinc boinc     15845 Feb 11 11:02 start_atlas.sh
[2026-02-11 12:42:38] -rw------- 1 boinc boinc 260038493 Feb 11 12:41 HITS.pool.root.1
[2026-02-11 12:42:38] -rw------- 1 boinc boinc   1198080 Feb 11 12:42 result.tar.gz
12:42:40 (540967): run_atlas exited; CPU time 22707.718625
12:42:40 (540967): called boinc_finish(0)

</stderr_txt>
]]>

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