Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
07:51:48 (1266047): wrapper (7.7.26015): starting
07:51:48 (1266047): wrapper: running run_atlas (--nthreads 4)
[2026-02-12 07:51:48] Arguments: --nthreads 4
[2026-02-12 07:51:48] Threads: 4
[2026-02-12 07:51:48] Checking for CVMFS
[2026-02-12 07:51:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 07:51:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 07:51:48] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 07:51:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 07:51:49] 2.13.3.0 639369 5174 47080 156141 2 50 25280925 33554433 0 130560 0 2023733 99.985 162387 197 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-02-12 07:51:49] CVMFS is ok
[2026-02-12 07:51:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 07:51:49] Checking for apptainer binary...
[2026-02-12 07:51:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 07:51:49] Running /usr/bin/apptainer --version
[2026-02-12 07:51:49] apptainer version 1.4.5
[2026-02-12 07:51:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 07:51:49] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-02-12 07:51:49] apptainer works
[2026-02-12 07:51:49] Set ATHENA_PROC_NUMBER=4
[2026-02-12 07:51:49] Set ATHENA_CORE_NUMBER=4
[2026-02-12 07:51:49] Starting ATLAS job with PandaID=7007751803
[2026-02-12 07:51:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 08:55:08]  *** The last 200 lines of the pilot log: ***
[2026-02-12 08:55:08]  guid=ab37b875-c9fc-4876-af27-4f127feaa8ed
[2026-02-12 08:55:08]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-12 08:55:08]  is_altstaged=None
[2026-02-12 08:55:08]  is_tar=False
[2026-02-12 08:55:08]  lfn=log.48318018._007244.job.log.tgz.1
[2026-02-12 08:55:08]  mtime=0
[2026-02-12 08:55:08]  protocol_id=None
[2026-02-12 08:55:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-12 08:55:08]  replicas=None
[2026-02-12 08:55:08]  scope=mc23_13p6TeV
[2026-02-12 08:55:08]  status=None
[2026-02-12 08:55:08]  status_code=0
[2026-02-12 08:55:08]  storage_token=
[2026-02-12 08:55:08]  surl=/home/ek/BOINC/slots/0/PanDA_Pilot-7007751803/log.48318018._007244.job.log.tgz.1
[2026-02-12 08:55:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/77/log.48318018._007244.job.log.tgz.1
[2026-02-12 08:55:08]  workdir=None
[2026-02-12 08:55:08] ]
[2026-02-12 08:55:08] 2026-02-12 06:54:14,905 | INFO     | transferring file log.48318018._007244.job.log.tgz.1 from /home/ek/BOINC/slots/0/PanDA_Pilot-7007751803/log.48318018._007244.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-02-12 08:55:08] 2026-02-12 06:54:14,905 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/0/PanDA_Pilot-7007751803/log.48318018._007244.job.log.tgz.1 /home/ek/BOINC/slots/0/log.48318018._007244.job
[2026-02-12 08:55:08] 2026-02-12 06:54:14,913 | INFO     | adding to output.list: log.48318018._007244.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/77/log.48318018._007244.job.log.tg
[2026-02-12 08:55:08] 2026-02-12 06:54:14,913 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-12 08:55:08] 2026-02-12 06:54:14,913 | INFO     | summary of transferred files:
[2026-02-12 08:55:08] 2026-02-12 06:54:14,913 | INFO     |  -- lfn=log.48318018._007244.job.log.tgz.1, status_code=0, status=transferred
[2026-02-12 08:55:08] 2026-02-12 06:54:14,913 | INFO     | stage-out finished correctly
[2026-02-12 08:55:08] 2026-02-12 06:54:16,171 | INFO     | time since job start (3739s) is within the limit (349056.0s)
[2026-02-12 08:55:08] 2026-02-12 06:54:16,900 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-12 08:55:08] 2026-02-12 06:54:16,926 | INFO     | job 7007751803 has state=finished
[2026-02-12 08:55:08] 2026-02-12 06:54:16,926 | INFO     | preparing for final server update for job 7007751803 in state='finished'
[2026-02-12 08:55:08] 2026-02-12 06:54:16,926 | INFO     | reading metadata from: /home/ek/BOINC/slots/0/PanDA_Pilot-7007751803/jobReport.json
[2026-02-12 08:55:08] 2026-02-12 06:54:16,927 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/0/workernode_map.json
[2026-02-12 08:55:08] 2026-02-12 06:54:16,928 | INFO     | this job has now completed (state=finished)
[2026-02-12 08:55:08] 2026-02-12 06:54:16,928 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-12 08:55:08] 2026-02-12 06:54:16,928 | INFO     | log transfer has been attempted: DONE
[2026-02-12 08:55:08] 2026-02-12 06:54:16,928 | INFO     | job 7007751803 has finished - writing final server update
[2026-02-12 08:55:08] 2026-02-12 06:54:16,928 | INFO     | total number of processed events: 400 (read)
[2026-02-12 08:55:08] 2026-02-12 06:54:16,929 | INFO     | using path: /home/ek/BOINC/slots/0/PanDA_Pilot-7007751803/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 08:55:08] 2026-02-12 06:54:16,930 | INFO     | extracted standard info from prmon json
[2026-02-12 08:55:08] 2026-02-12 06:54:16,930 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 08:55:08] 2026-02-12 06:54:16,930 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 08:55:08] 2026-02-12 06:54:16,930 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 08:55:08] 2026-02-12 06:54:16,930 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 08:55:08] 2026-02-12 06:54:16,930 | INFO     | fitting pss+swap vs Time
[2026-02-12 08:55:08] 2026-02-12 06:54:16,930 | INFO     | sum of square deviations: 48810217.5
[2026-02-12 08:55:08] 2026-02-12 06:54:16,930 | INFO     | sum of deviations: -7939686952.5
[2026-02-12 08:55:08] 2026-02-12 06:54:16,930 | INFO     | mean x: 1770877454.5
[2026-02-12 08:55:08] 2026-02-12 06:54:16,930 | INFO     | mean y: 2503429.7592592593
[2026-02-12 08:55:08] 2026-02-12 06:54:16,930 | INFO     | intersect: 288061302183.73047
[2026-02-12 08:55:08] 2026-02-12 06:54:16,931 | INFO     | chi2: 0.10853020239588689
[2026-02-12 08:55:08] 2026-02-12 06:54:16,931 | INFO     | current memory leak: -162.66 B/s (using 54 data points, chi2=0.11)
[2026-02-12 08:55:08] 2026-02-12 06:54:16,931 | INFO     | could have reported an average CPU frequency of 2995 MHz (6 samples)
[2026-02-12 08:55:08] 2026-02-12 06:54:16,931 | INFO     | ..............................
[2026-02-12 08:55:08] 2026-02-12 06:54:16,931 | INFO     | . Timing measurements:
[2026-02-12 08:55:08] 2026-02-12 06:54:16,931 | INFO     | . get job = 0 s
[2026-02-12 08:55:08] 2026-02-12 06:54:16,931 | INFO     | . initial setup = 3 s
[2026-02-12 08:55:08] 2026-02-12 06:54:16,931 | INFO     | . payload setup = 2 s
[2026-02-12 08:55:08] 2026-02-12 06:54:16,931 | INFO     | . stage-in = 0 s
[2026-02-12 08:55:08] 2026-02-12 06:54:16,931 | INFO     | . payload execution = 3720 s
[2026-02-12 08:55:08] 2026-02-12 06:54:16,931 | INFO     | . stage-out = 0 s
[2026-02-12 08:55:08] 2026-02-12 06:54:16,931 | INFO     | . log creation = 0 s
[2026-02-12 08:55:08] 2026-02-12 06:54:16,931 | INFO     | ..............................
[2026-02-12 08:55:08] 2026-02-12 06:54:16,969 | INFO     | 
[2026-02-12 08:55:08] 2026-02-12 06:54:16,969 | INFO     | job summary report
[2026-02-12 08:55:08] 2026-02-12 06:54:16,969 | INFO     | --------------------------------------------------
[2026-02-12 08:55:08] 2026-02-12 06:54:16,969 | INFO     | PanDA job id: 7007751803
[2026-02-12 08:55:08] 2026-02-12 06:54:16,969 | INFO     | task id: 48318018
[2026-02-12 08:55:08] 2026-02-12 06:54:16,969 | INFO     | errors: (none)
[2026-02-12 08:55:08] 2026-02-12 06:54:16,969 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 08:55:08] 2026-02-12 06:54:16,969 | INFO     | pilot state: finished 
[2026-02-12 08:55:08] 2026-02-12 06:54:16,969 | INFO     | transexitcode: 0
[2026-02-12 08:55:08] 2026-02-12 06:54:16,969 | INFO     | exeerrorcode: 0
[2026-02-12 08:55:08] 2026-02-12 06:54:16,969 | INFO     | exeerrordiag: 
[2026-02-12 08:55:08] 2026-02-12 06:54:16,969 | INFO     | exitcode: 0
[2026-02-12 08:55:08] 2026-02-12 06:54:16,969 | INFO     | exitmsg: OK
[2026-02-12 08:55:08] 2026-02-12 06:54:16,969 | INFO     | cpuconsumptiontime: 14037 s
[2026-02-12 08:55:08] 2026-02-12 06:54:16,969 | INFO     | nevents: 400
[2026-02-12 08:55:08] 2026-02-12 06:54:16,969 | INFO     | neventsw: 0
[2026-02-12 08:55:08] 2026-02-12 06:54:16,969 | INFO     | pid: 1274567
[2026-02-12 08:55:08] 2026-02-12 06:54:16,969 | INFO     | pgrp: 1274567
[2026-02-12 08:55:08] 2026-02-12 06:54:16,969 | INFO     | corecount: 4
[2026-02-12 08:55:08] 2026-02-12 06:54:16,970 | INFO     | event service: False
[2026-02-12 08:55:08] 2026-02-12 06:54:16,970 | INFO     | sizes: {0: 2282216, 11: 2282216, 3725: 2308065, 3726: 2317063, 3728: 2317313}
[2026-02-12 08:55:08] 2026-02-12 06:54:16,970 | INFO     | --------------------------------------------------
[2026-02-12 08:55:08] 2026-02-12 06:54:16,970 | INFO     | 
[2026-02-12 08:55:08] 2026-02-12 06:54:16,970 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/0
[2026-02-12 08:55:08] 2026-02-12 06:54:16,979 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 08:55:08] 2026-02-12 06:54:16,979 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 08:55:08] 2026-02-12 06:54:16,979 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 08:55:08] 2026-02-12 06:54:16,979 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 08:55:08] 2026-02-12 06:54:16,979 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 08:55:08] 2026-02-12 06:54:16,979 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 08:55:08] 2026-02-12 06:54:16,979 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 08:55:08] 2026-02-12 06:54:16,979 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 08:55:08] 2026-02-12 06:54:16,979 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 08:55:08] 2026-02-12 06:54:16,979 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 08:55:08] 2026-02-12 06:54:16,979 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 08:55:08] 2026-02-12 06:54:16,979 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 08:55:08] 2026-02-12 06:54:16,979 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 08:55:08] 2026-02-12 06:54:16,979 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 08:55:08] 2026-02-12 06:54:16,979 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 08:55:08] 2026-02-12 06:54:16,979 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 08:55:08] 2026-02-12 06:54:16,979 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 08:55:08] 2026-02-12 06:54:16,979 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 08:55:08] 2026-02-12 06:54:16,979 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 08:55:08] 2026-02-12 06:54:16,979 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 08:55:08] 2026-02-12 06:54:16,980 | INFO     | job 7007751803 has completed (purged errors)
[2026-02-12 08:55:08] 2026-02-12 06:54:16,980 | INFO     | overall cleanup function is called
[2026-02-12 08:55:08] 2026-02-12 06:54:17,986 | INFO     | --- collectZombieJob: --- 10, [1274567]
[2026-02-12 08:55:08] 2026-02-12 06:54:17,986 | INFO     | zombie collector waiting for pid 1274567
[2026-02-12 08:55:08] 2026-02-12 06:54:17,986 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 08:55:08] 2026-02-12 06:54:17,986 | INFO     | collected zombie processes
[2026-02-12 08:55:08] 2026-02-12 06:54:17,987 | INFO     | will attempt to kill all subprocesses of pid=1274567
[2026-02-12 08:55:08] 2026-02-12 06:54:18,071 | INFO     | process IDs to be killed: [1274567] (in reverse order)
[2026-02-12 08:55:08] 2026-02-12 06:54:18,099 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 08:55:08] 2026-02-12 06:54:18,099 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 08:55:08] 2026-02-12 06:54:18,102 | INFO     | did not find any defunct processes belonging to 1274567
[2026-02-12 08:55:08] 2026-02-12 06:54:18,104 | INFO     | did not find any defunct processes belonging to 1274567
[2026-02-12 08:55:08] 2026-02-12 06:54:18,104 | INFO     | ready for new job
[2026-02-12 08:55:08] 2026-02-12 06:54:18,104 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 08:55:08] 2026-02-12 06:54:18,105 | INFO     | **************************************
[2026-02-12 08:55:08] 2026-02-12 06:54:18,105 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 08:55:08] 2026-02-12 06:54:18,105 | INFO     | **************************************
[2026-02-12 08:55:08] 2026-02-12 06:54:18,105 | INFO     | 
[2026-02-12 08:55:08] 2026-02-12 06:54:18,105 | INFO     | architecture information:
[2026-02-12 08:55:08] 2026-02-12 06:54:18,105 | INFO     | executing command: cat /etc/os-release
[2026-02-12 08:55:08] 2026-02-12 06:54:18,110 | INFO     | cat /etc/os-release:
[2026-02-12 08:55:08] NAME="CentOS Linux"
[2026-02-12 08:55:08] VERSION="7 (Core)"
[2026-02-12 08:55:08] ID="centos"
[2026-02-12 08:55:08] ID_LIKE="rhel fedora"
[2026-02-12 08:55:08] VERSION_ID="7"
[2026-02-12 08:55:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 08:55:08] ANSI_COLOR="0;31"
[2026-02-12 08:55:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 08:55:08] HOME_URL="https://www.centos.org/"
[2026-02-12 08:55:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 08:55:08] 
[2026-02-12 08:55:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 08:55:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 08:55:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 08:55:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 08:55:08] 
[2026-02-12 08:55:08] 2026-02-12 06:54:18,110 | INFO     | **************************************
[2026-02-12 08:55:08] 2026-02-12 06:54:18,613 | INFO     | executing command: df -mP /home/ek/BOINC/slots/0
[2026-02-12 08:55:08] 2026-02-12 06:54:18,618 | INFO     | sufficient remaining disk space (57330892800 B)
[2026-02-12 08:55:08] 2026-02-12 06:54:18,618 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 08:55:08] 2026-02-12 06:54:18,619 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 08:55:08] 2026-02-12 06:54:18,619 | INFO     | update_server=False
[2026-02-12 08:55:08] 2026-02-12 06:54:18,619 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 08:55:08] 2026-02-12 06:54:18,619 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 08:55:08] 2026-02-12 06:54:18,619 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 08:55:08] 2026-02-12 06:54:18,619 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 08:55:08] 2026-02-12 06:54:18,622 | INFO     | all data control threads have been joined
[2026-02-12 08:55:08] 2026-02-12 06:54:18,698 | INFO     | all job control threads have been joined
[2026-02-12 08:55:08] 2026-02-12 06:54:18,702 | INFO     | all payload control threads have been joined
[2026-02-12 08:55:08] 2026-02-12 06:54:19,380 | WARNING  | process 1274567 can no longer be monitored (due to stat problems) - aborting
[2026-02-12 08:55:08] 2026-02-12 06:54:19,435 | INFO     | using path: /home/ek/BOINC/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 08:55:08] 2026-02-12 06:54:19,514 | INFO     | number of running child processes to parent process 1274567: 1
[2026-02-12 08:55:08] 2026-02-12 06:54:19,515 | INFO     | maximum number of monitored processes: 6
[2026-02-12 08:55:08] 2026-02-12 06:54:19,515 | INFO     | aborting job monitoring since job object (job id=7007751803) has expired
[2026-02-12 08:55:08] 2026-02-12 06:54:19,515 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 08:55:08] 2026-02-12 06:54:19,515 | INFO     | will abort loop
[2026-02-12 08:55:08] 2026-02-12 06:54:19,624 | INFO     | [job] retrieve thread has finished
[2026-02-12 08:55:08] 2026-02-12 06:54:19,624 | INFO     | [job] queue monitor thread has finished
[2026-02-12 08:55:08] 2026-02-12 06:54:19,624 | INFO     | [data] control thread has finished
[2026-02-12 08:55:08] 2026-02-12 06:54:19,703 | INFO     | [job] control thread has finished
[2026-02-12 08:55:08] 2026-02-12 06:54:19,708 | INFO     | [payload] control thread has finished
[2026-02-12 08:55:08] 2026-02-12 06:54:19,740 | INFO     | [data] copytool_in thread has finished
[2026-02-12 08:55:08] 2026-02-12 06:54:19,744 | INFO     | [job] validate thread has finished
[2026-02-12 08:55:08] 2026-02-12 06:54:19,847 | INFO     | [payload] validate_post thread has finished
[2026-02-12 08:55:08] 2026-02-12 06:54:20,520 | INFO     | [job] job monitor thread has finished
[2026-02-12 08:55:08] 2026-02-12 06:54:20,620 | INFO     | [data] copytool_out thread has finished
[2026-02-12 08:55:08] 2026-02-12 06:54:20,687 | INFO     | [payload] failed_post thread has finished
[2026-02-12 08:55:08] 2026-02-12 06:54:21,021 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 08:55:08] 2026-02-12 06:54:21,052 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 08:55:08] 2026-02-12 06:54:21,062 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 08:55:08] 2026-02-12 06:54:22,624 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 08:55:08] 2026-02-12 06:54:28,790 | INFO     | job.realtimelogging is not enabled
[2026-02-12 08:55:08] 2026-02-12 06:54:29,796 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 08:55:08] 2026-02-12 06:54:49,327 | INFO     | PID=1269875 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-12 08:55:08] 2026-02-12 06:54:49,328 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 08:55:08] 2026-02-12 06:54:49,328 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 08:55:08] 2026-02-12 06:54:49,328 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 08:55:08] 2026-02-12 06:55:02,043 | INFO     | [monitor] cgroup control has ended
[2026-02-12 08:55:08] 2026-02-12 06:55:03,464 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140017203652416)>', '<ExcThread(monitor, started 140016705582848)>']
[2026-02-12 08:55:08] 2026-02-12 06:55:04,400 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 08:55:08] 2026-02-12 06:55:04,400 | INFO     | [monitor] control thread has ended
[2026-02-12 08:55:08] 2026-02-12 06:55:08,489 | INFO     | all workflow threads have been joined
[2026-02-12 08:55:08] 2026-02-12 06:55:08,489 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 08:55:08] 2026-02-12 06:55:08,489 | INFO     | traces error code: 0
[2026-02-12 08:55:08] 2026-02-12 06:55:08,489 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 08:55:08] 2026-02-12 06:55:08,530 [wrapper] ==== pilot stdout END ====
[2026-02-12 08:55:08] 2026-02-12 06:55:08,532 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 08:55:08] 2026-02-12 06:55:08,533 [wrapper] pilotpid: 1269875
[2026-02-12 08:55:08] 2026-02-12 06:55:08,534 [wrapper] Pilot exit status: 0
[2026-02-12 08:55:08] 2026-02-12 06:55:08,540 [wrapper] pandaids: 7007751803
[2026-02-12 08:55:08] 2026-02-12 06:55:08,560 [wrapper] cleanup supervisor_pilot 1318595 1269876
[2026-02-12 08:55:08] 2026-02-12 06:55:08,561 [wrapper] Test setup, not cleaning
[2026-02-12 08:55:08] 2026-02-12 06:55:08,563 [wrapper] apfmon messages muted
[2026-02-12 08:55:08] 2026-02-12 06:55:08,564 [wrapper] ==== wrapper stdout END ====
[2026-02-12 08:55:08] 2026-02-12 06:55:08,566 [wrapper] ==== wrapper stderr END ====
[2026-02-12 08:55:08]  *** Error codes and diagnostics ***
[2026-02-12 08:55:08]     "exeErrorCode": 0,
[2026-02-12 08:55:08]     "exeErrorDiag": "",
[2026-02-12 08:55:08]     "pilotErrorCode": 0,
[2026-02-12 08:55:08]     "pilotErrorDiag": "",
[2026-02-12 08:55:08]  *** Listing of results directory ***
[2026-02-12 08:55:08] total 676172
[2026-02-12 08:55:08] -rw-r--r-- 1 ek ek    584627 Feb 10 15:02 pilot3.tar.gz
[2026-02-12 08:55:08] -rwx------ 1 ek ek     36322 Feb 10 15:02 runpilot2-wrapper.sh
[2026-02-12 08:55:08] -rw-r--r-- 1 ek ek      5111 Feb 10 15:03 queuedata.json
[2026-02-12 08:55:08] -rw-rw-r-- 1 ek ek       100 Feb 12 07:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 08:55:08] -rwxr-xr-x 1 ek ek      7986 Feb 12 07:51 run_atlas
[2026-02-12 08:55:08] -rw-rw-r-- 1 ek ek       105 Feb 12 07:51 job.xml
[2026-02-12 08:55:08] -rw-r--r-- 2 ek ek 496612914 Feb 12 07:51 EVNT.48318016._000143.pool.root.1
[2026-02-12 08:55:08] -rw-r--r-- 2 ek ek    597948 Feb 12 07:51 input.tar.gz
[2026-02-12 08:55:08] -rw-r--r-- 2 ek ek     15845 Feb 12 07:51 start_atlas.sh
[2026-02-12 08:55:08] drwxrwx--x 2 ek ek      4096 Feb 12 07:51 shared
[2026-02-12 08:55:08] -rw-rw-r-- 1 ek ek         0 Feb 12 07:51 boinc_setup_complete
[2026-02-12 08:55:08] -rw-rw-r-- 1 ek ek      9841 Feb 12 07:51 init_data.xml
[2026-02-12 08:55:08] -rw-rw-r-- 1 ek ek         0 Feb 12 07:51 boinc_lockfile
[2026-02-12 08:55:08] -rw-rw-r-- 1 ek ek      2521 Feb 12 07:51 pandaJob.out
[2026-02-12 08:55:08] -rw------- 1 ek ek        50 Feb 12 07:51 setup.sh.local
[2026-02-12 08:55:08] -rw------- 1 ek ek   1004345 Feb 12 07:51 agis_schedconf.cvmfs.json
[2026-02-12 08:55:08] -rw------- 1 ek ek   1512955 Feb 12 07:51 agis_ddmendpoints.agis.ALL.json
[2026-02-12 08:55:08] -rw------- 1 ek ek       433 Feb 12 07:51 workernode_map.json
[2026-02-12 08:55:08] drwx------ 5 ek ek      4096 Feb 12 07:51 pilot3
[2026-02-12 08:55:08] -rw------- 1 ek ek 190160973 Feb 12 08:53 HITS.48318018._007244.pool.root.1
[2026-02-12 08:55:08] -rw-rw-r-- 1 ek ek       530 Feb 12 08:54 boinc_task_state.xml
[2026-02-12 08:55:08] -rw------- 1 ek ek      1028 Feb 12 08:54 memory_monitor_summary.json
[2026-02-12 08:55:08] -rw------- 1 ek ek    278514 Feb 12 08:54 log.48318018._007244.job.log.tgz.1
[2026-02-12 08:55:08] -rw------- 1 ek ek      6321 Feb 12 08:54 heartbeat.json
[2026-02-12 08:55:08] -rw------- 1 ek ek        95 Feb 12 08:54 pilot_heartbeat.json
[2026-02-12 08:55:08] -rw-rw-r-- 1 ek ek      8192 Feb 12 08:55 boinc_mmap_file
[2026-02-12 08:55:08] -rw-rw-r-- 1 ek ek        27 Feb 12 08:55 wrapper_checkpoint.txt
[2026-02-12 08:55:08] -rw------- 1 ek ek      5337 Feb 12 08:55 pilotlog.txt
[2026-02-12 08:55:08] -rw------- 1 ek ek    561090 Feb 12 08:55 log.48318018._007244.job.log.1
[2026-02-12 08:55:08] -rw------- 1 ek ek       357 Feb 12 08:55 output.list
[2026-02-12 08:55:08] -rw-rw-r-- 1 ek ek       620 Feb 12 08:55 runtime_log
[2026-02-12 08:55:08] -rw------- 1 ek ek    860160 Feb 12 08:55 result.tar.gz
[2026-02-12 08:55:08] -rw-rw-r-- 1 ek ek      9501 Feb 12 08:55 runtime_log.err
[2026-02-12 08:55:08] -rw------- 1 ek ek       659 Feb 12 08:55 hvkMDmOZ298nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm97hKDm5qE5Yn.diag
[2026-02-12 08:55:08] -rw-rw-r-- 1 ek ek     21201 Feb 12 08:55 stderr.txt
[2026-02-12 08:55:08] HITS file was successfully produced:
[2026-02-12 08:55:08] -rw------- 1 ek ek 190160973 Feb 12 08:53 shared/HITS.pool.root.1
[2026-02-12 08:55:08]  *** Contents of shared directory: ***
[2026-02-12 08:55:08] total 672132
[2026-02-12 08:55:08] -rw-r--r-- 2 ek ek 496612914 Feb 12 07:51 ATLAS.root_0
[2026-02-12 08:55:08] -rw-r--r-- 2 ek ek    597948 Feb 12 07:51 input.tar.gz
[2026-02-12 08:55:08] -rw-r--r-- 2 ek ek     15845 Feb 12 07:51 start_atlas.sh
[2026-02-12 08:55:08] -rw------- 1 ek ek 190160973 Feb 12 08:53 HITS.pool.root.1
[2026-02-12 08:55:08] -rw------- 1 ek ek    860160 Feb 12 08:55 result.tar.gz
08:55:10 (1266047): run_atlas exited; CPU time 14065.152525
08:55:10 (1266047): called boinc_finish(0)

</stderr_txt>
]]>

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