Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-11 01:34:40 (52864): vboxwrapper version 26210
2026-02-11 01:34:40 (52864): BOINC client version: 8.2.8
2026-02-11 01:34:40 (52864): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-02-11 01:34:40 (52864): Successfully copied 'init_data.xml' to the shared directory.
2026-02-11 01:34:40 (52864): Create VM. (boinc_8230f6338dca35c3, slot#4)
2026-02-11 01:34:40 (52864): Setting Memory Size for VM. (4400MB)
2026-02-11 01:34:40 (52864): Setting CPU Count for VM. (4)
2026-02-11 01:34:40 (52864): Setting Chipset Options for VM.
2026-02-11 01:34:40 (52864): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-11 01:34:40 (52864): Setting Boot Options for VM.
2026-02-11 01:34:41 (52864): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-11 01:34:41 (52864): Enabling VM Network Access.
2026-02-11 01:34:41 (52864): Disabling USB Support for VM.
2026-02-11 01:34:41 (52864): Disabling COM Port Support for VM.
2026-02-11 01:34:41 (52864): Disabling LPT Port Support for VM.
2026-02-11 01:34:41 (52864): Disabling Audio Support for VM.
2026-02-11 01:34:41 (52864): Disabling Clipboard Support for VM.
2026-02-11 01:34:41 (52864): Disabling Drag and Drop Support for VM.
2026-02-11 01:34:41 (52864): Adding storage controller(s) to VM.
2026-02-11 01:34:41 (52864): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-11 01:34:41 (52864): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-11 01:34:41 (52864): forwarding host port 40319 to guest port 80
2026-02-11 01:34:42 (52864): Enabling remote desktop for VM.
2026-02-11 01:34:42 (52864): Required extension pack not installed, remote desktop not enabled.
2026-02-11 01:34:42 (52864): Enabling shared directory for VM.
2026-02-11 01:34:42 (52864): Starting VM using VBoxManage interface. (boinc_8230f6338dca35c3, slot#4)
2026-02-11 01:34:43 (52864): Successfully started VM. (PID = '53381')
2026-02-11 01:34:43 (52864): Reporting VM Process ID to BOINC.
2026-02-11 01:34:43 (52864): Guest Log: BIOS: VirtualBox 7.2.6
2026-02-11 01:34:43 (52864): Guest Log: CPUID EDX: 0x178bfbff
2026-02-11 01:34:43 (52864): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-11 01:34:43 (52864): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-11 01:34:43 (52864): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-11 01:34:43 (52864): Detected: Web Application Enabled (http://localhost:40319)
2026-02-11 01:34:43 (52864): Preference change detected
2026-02-11 01:34:43 (52864): Setting CPU throttle for VM. (100%)
2026-02-11 01:34:43 (52864): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-11 01:34:45 (52864): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-11 01:34:45 (52864): Guest Log: BIOS: Booting from Hard Disk...
2026-02-11 01:34:48 (52864): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-11 01:34:48 (52864): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-11 01:34:48 (52864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-11 01:34:54 (52864): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-11 01:34:54 (52864): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-11 01:35:02 (52864): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-11 01:35:02 (52864): Guest Log: 00:00:00.000238 main     Log opened 2026-02-10T17:35:00.524392000Z
2026-02-11 01:35:02 (52864): Guest Log: 00:00:00.000369 main     OS Product: Linux
2026-02-11 01:35:02 (52864): Guest Log: 00:00:00.000417 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-11 01:35:02 (52864): Guest Log: 00:00:00.000452 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-11 01:35:02 (52864): Guest Log: 00:00:00.000490 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-11 01:35:02 (52864): Guest Log: 00:00:00.000491 main     Process ID: 1300
2026-02-11 01:35:02 (52864): Guest Log: 00:00:00.000492 main     Package type: LINUX_64BITS_GENERIC
2026-02-11 01:35:02 (52864): Guest Log: 00:00:00.002256 main     5.2.32 r132073 started. Verbose level = 0
2026-02-11 01:35:02 (52864): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-11 01:35:02 (52864): Guest Log: [INFO] Mounting shared directory
2026-02-11 01:35:03 (52864): Guest Log: [INFO] Checking for init_data.xml
2026-02-11 01:37:08 (52864): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-11 01:37:08 (52864): Guest Log: [INFO] Detected branch: prod
2026-02-11 01:37:08 (52864): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-11 01:37:08 (52864): Guest Log: Copying input files
2026-02-11 01:37:11 (52864): Guest Log: Copied input files into RunAtlas.
2026-02-11 01:37:12 (52864): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-11 01:37:12 (52864): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-11 01:37:12 (52864): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-11 01:37:12 (52864): Guest Log: Further information can be found at the LHC@home message board.
2026-02-11 01:37:31 (52864): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-11 01:37:31 (52864): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-11 01:37:31 (52864): Guest Log: 2.6.3.0 1630 0 30180 156089 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-02-11 01:37:32 (52864): Guest Log: copied the webapp to /var/www
2026-02-11 01:37:32 (52864): Guest Log: ATHENA_PROC_NUMBER=4
2026-02-11 01:37:32 (52864): Guest Log: ATHENA_CORE_NUMBER=4
2026-02-11 01:37:33 (52864): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-11 01:37:33 (52864): Guest Log:  *** Starting ATLAS job. (PandaID=7007443075 taskID=48318042) ***
2026-02-11 03:13:43 (52864): Status Report: Elapsed Time: '6000.000000'
2026-02-11 03:13:43 (52864): Status Report: CPU Time: '19187.070000'
2026-02-11 04:52:44 (52864): Status Report: Elapsed Time: '12000.000000'
2026-02-11 04:52:44 (52864): Status Report: CPU Time: '42775.490000'
2026-02-11 06:31:44 (52864): Status Report: Elapsed Time: '18000.000000'
2026-02-11 06:31:44 (52864): Status Report: CPU Time: '66364.490000'
2026-02-11 07:37:04 (52864): Guest Log:  *** Job finished ***
2026-02-11 07:37:04 (52864): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-11 07:37:04 (52864): Guest Log: 2026-02-10 23:36:40,632 | INFO     | end of generic workflow (traces error code: 0)
2026-02-11 07:37:04 (52864): Guest Log: 2026-02-10 23:36:40,632 | INFO     | traces error code: 0
2026-02-11 07:37:04 (52864): Guest Log: 2026-02-10 23:36:40,632 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-11 07:37:04 (52864): Guest Log: 2026-02-10 23:36:59,971 | INFO     | PID=6062 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-02-11 07:37:04 (52864): Guest Log: 2026-02-10 23:36:59,972 | INFO     | found 0 job(s) in 20 queues
2026-02-11 07:37:04 (52864): Guest Log: 2026-02-10 23:36:59,972 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-11 07:37:04 (52864): Guest Log: 2026-02-10 23:36:59,972 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-11 07:37:04 (52864): Guest Log: 2026-02-10 23:36:59,972 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-11 07:37:04 (52864): Guest Log: 2026-02-10 23:36:59,972 | INFO     | [monitor] control thread has ended
2026-02-11 07:37:04 (52864): Guest Log: 2026-02-10 23:37:00,104 [wrapper] ==== pilot stdout END ====
2026-02-11 07:37:04 (52864): Guest Log: 2026-02-10 23:37:00,116 [wrapper] ==== wrapper stdout RESUME ====
2026-02-11 07:37:04 (52864): Guest Log: 2026-02-10 23:37:00,126 [wrapper] pilotpid: 6062
2026-02-11 07:37:04 (52864): Guest Log: 2026-02-10 23:37:00,138 [wrapper] Pilot exit status: 0
2026-02-11 07:37:04 (52864): Guest Log: ./runpilot2-wrapper.sh: line 1019: /usr/bin/xargs: Input/output error
2026-02-11 07:37:04 (52864): Guest Log: 2026-02-10 23:37:03,046 [wrapper] pandaids: 
2026-02-11 07:37:04 (52864): Guest Log: 2026-02-10 23:37:03,111 [wrapper] cleanup supervisor_pilot 30435 6063
2026-02-11 07:37:04 (52864): Guest Log: 2026-02-10 23:37:03,126 [wrapper] Test setup, not cleaning
2026-02-11 07:37:04 (52864): Guest Log: 2026-02-10 23:37:03,137 [wrapper] apfmon messages muted
2026-02-11 07:37:04 (52864): Guest Log: 2026-02-10 23:37:03,148 [wrapper] ==== wrapper stdout END ====
2026-02-11 07:37:04 (52864): Guest Log: 2026-02-10 23:37:03,159 [wrapper] ==== wrapper stderr END ====
2026-02-11 07:37:04 (52864): Guest Log:  *** Error codes and diagnostics ***
2026-02-11 07:37:04 (52864): Guest Log:     "exeErrorCode": 68,
2026-02-11 07:37:04 (52864): Guest Log:     "exeErrorDiag": "Fatal error in athena logfile: \"Logfile error in log.EVNTtoHITS: \"AthenaPoolCnvSvc                                                 FATAL AthenaPoolCnvSvc::::ExcNoDictForClass: Can't find dictionary information for class: EventStreamInfo_p1\"\"",
2026-02-11 07:37:04 (52864): Guest Log:     "pilotErrorCode": 1305,
2026-02-11 07:37:04 (52864): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformLogfileErrorException: Fatal error in athena logfile: \"Logfile error in log.EVNTtoHITS: \"AthenaPoolCnvSvc                                                 FATAL AthenaPoolCnvSvc:",
2026-02-11 07:37:04 (52864): Guest Log:  *** Listing of results directory ***
2026-02-11 07:37:04 (52864): Guest Log: total 8980
2026-02-11 07:37:04 (52864): Guest Log: -rw-r--r--. 1 atlas atlas  584627 Feb 10 10:23 pilot3.tar.gz
2026-02-11 07:37:04 (52864): Guest Log: -rwx------. 1 atlas atlas   36322 Feb 10 10:27 runpilot2-wrapper.sh
2026-02-11 07:37:04 (52864): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Feb 10 10:29 queuedata.json
2026-02-11 07:37:04 (52864): Guest Log: -rw-r--r--. 1 atlas atlas    8892 Feb 10 17:37 init_data.xml
2026-02-11 07:37:04 (52864): Guest Log: -rw-r--r--. 1 atlas atlas   15845 Feb 10 17:37 start_atlas.sh
2026-02-11 07:37:04 (52864): Guest Log: -rw-r--r--. 1 atlas atlas  597960 Feb 10 17:37 input.tar.gz
2026-02-11 07:37:04 (52864): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Feb 10 17:37 EVNT.48318040._000289.pool.root.1 -> /data/./ATLAS.root_0
2026-02-11 07:37:04 (52864): Guest Log: -rw-r--r--. 1 atlas atlas    2539 Feb 10 17:37 pandaJob.out
2026-02-11 07:37:04 (52864): Guest Log: -rw-------. 1 atlas atlas 1009534 Feb 10 17:40 agis_schedconf.cvmfs.json
2026-02-11 07:37:04 (52864): Guest Log: -rw-------. 1 atlas atlas     427 Feb 10 17:40 workernode_map.json
2026-02-11 07:37:04 (52864): Guest Log: drwx------. 5 atlas atlas    4096 Feb 10 17:41 pilot3
2026-02-11 07:37:04 (52864): Guest Log: -rw-------. 1 atlas atlas    1032 Feb 10 23:34 memory_monitor_summary.json
2026-02-11 07:37:04 (52864): Guest Log: -rw-------. 1 atlas atlas  512938 Feb 10 23:34 log.48318042._015206.job.log.tgz.1
2026-02-11 07:37:04 (52864): Guest Log: -rw-------. 1 atlas atlas       0 Feb 10 23:34 agis_ddmendpoints.agis.ALL.json
2026-02-11 07:37:04 (52864): Guest Log: -rw-------. 1 atlas atlas       0 Feb 10 23:34 cric_ddmendpoints.json
2026-02-11 07:37:04 (52864): Guest Log: -rw-------. 1 atlas atlas      95 Feb 10 23:36 pilot_heartbeat.json
2026-02-11 07:37:04 (52864): Guest Log: -rw-------. 1 atlas atlas    8859 Feb 10 23:36 heartbeat.json
2026-02-11 07:37:04 (52864): Guest Log: -rw-------. 1 atlas atlas     744 Feb 10 23:36 pilotlog.txt
2026-02-11 07:37:04 (52864): Guest Log: -rw-------. 1 atlas atlas 2906608 Feb 10 23:37 log.48318042._015206.job.log.1
2026-02-11 07:37:04 (52864): Guest Log: -rw-------. 1 atlas atlas     188 Feb 10 23:37 output.list
2026-02-11 07:37:04 (52864): Guest Log: -rw-r--r--. 1 atlas atlas     620 Feb 10 23:37 runtime_log
2026-02-11 07:37:04 (52864): Guest Log: -rw-------. 1 atlas atlas 3440640 Feb 10 23:37 result.tar.gz
2026-02-11 07:37:04 (52864): Guest Log: -rw-------. 1 atlas atlas     672 Feb 10 23:37 tL0MDmn8z98n9Rq4apOajLDm4fhM0noT9bVooX4SDmiFhKDmsPO6zn.diag
2026-02-11 07:37:04 (52864): Guest Log: -rw-r--r--. 1 atlas atlas    8639 Feb 10 23:37 runtime_log.err
2026-02-11 07:37:04 (52864): Guest Log: Looking for outputfile HITS.48318042._015206.pool.root.1
2026-02-11 07:37:04 (52864): Guest Log: No HITS file was produced
2026-02-11 07:37:04 (52864): Guest Log: Successfully finished the ATLAS job!
2026-02-11 07:37:04 (52864): Guest Log: Copying the results back to the shared directory!
2026-02-11 07:37:04 (52864): Guest Log:  *** Contents of shared directory: ***
2026-02-11 07:37:04 (52864): Guest Log: total 483588
2026-02-11 07:37:04 (52864): Guest Log: -rw-r--r--. 1 root root 491120297 Feb 10 17:34 ATLAS.root_0
2026-02-11 07:37:04 (52864): Guest Log: -rw-r--r--. 1 root root      8892 Feb 10 17:34 init_data.xml
2026-02-11 07:37:04 (52864): Guest Log: -rw-r--r--. 1 root root    597960 Feb 10 17:34 input.tar.gz
2026-02-11 07:37:04 (52864): Guest Log: -rw-r--r--. 1 root root   3440640 Feb 10 23:37 result.tar.gz
2026-02-11 07:37:04 (52864): Guest Log: -rw-r--r--. 1 root root     15845 Feb 10 17:34 start_atlas.sh
2026-02-11 07:37:04 (52864): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-11 07:37:04 (52864): VM Completion File Detected.
2026-02-11 07:37:04 (52864): Powering off VM.
2026-02-11 07:37:05 (52864): Successfully stopped VM.
2026-02-11 07:37:05 (52864): Deregistering VM. (boinc_8230f6338dca35c3, slot#4)
2026-02-11 07:37:05 (52864): Removing network bandwidth throttle group from VM.
2026-02-11 07:37:05 (52864): Removing VM from VirtualBox.
2026-02-11 07:37:10 (52864): called boinc_finish(0)

</stderr_txt>
]]>

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