Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
10:15:47 (683192): wrapper (7.7.26015): starting
10:15:47 (683192): wrapper: running run_atlas (--nthreads 8)
[2026-02-10 10:15:47] Arguments: --nthreads 8
[2026-02-10 10:15:47] Threads: 8
[2026-02-10 10:15:47] Checking for CVMFS
[2026-02-10 10:15:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 10:15:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 10:15:47] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 10:15:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 10:15:48] 2.13.3.0 50900 854 52396 156089 0 188 1806074 20480001 2677 130560 0 1786301 99.630 674329 144 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-10 10:15:48] CVMFS is ok
[2026-02-10 10:15:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-10 10:15:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-10 10:15:48] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-10 10:15:48] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-10 10:15:48] Further information can be found at the LHC@home message board.
[2026-02-10 10:15:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 10:15:48] Checking for apptainer binary...
[2026-02-10 10:15:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 10:15:48] Running /usr/bin/apptainer --version
[2026-02-10 10:15:48] apptainer version 1.4.5
[2026-02-10 10:15:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 10:15:48] jonny-linux
[2026-02-10 10:15:48] apptainer works
[2026-02-10 10:15:48] Set ATHENA_PROC_NUMBER=8
[2026-02-10 10:15:48] Set ATHENA_CORE_NUMBER=8
[2026-02-10 10:15:48] Starting ATLAS job with PandaID=7007442545
[2026-02-10 10:15:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/radeon2/boinc3/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-10 11:12:11]  *** The last 200 lines of the pilot log: ***
[2026-02-10 11:12:11]  is_tar=False
[2026-02-10 11:12:11]  lfn=log.48442098._005764.job.log.tgz.1
[2026-02-10 11:12:11]  mtime=0
[2026-02-10 11:12:11]  protocol_id=None
[2026-02-10 11:12:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-10 11:12:11]  replicas=None
[2026-02-10 11:12:11]  scope=mc23_13p6TeV
[2026-02-10 11:12:11]  status=None
[2026-02-10 11:12:11]  status_code=0
[2026-02-10 11:12:11]  storage_token=
[2026-02-10 11:12:11]  surl=/home/radeon2/boinc3/slots/3/PanDA_Pilot-7007442545/log.48442098._005764.job.log.tgz.1
[2026-02-10 11:12:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/fe/log.48442098._005764.job.log.tgz.1
[2026-02-10 11:12:11]  workdir=None
[2026-02-10 11:12:11] ]
[2026-02-10 11:12:11] 2026-02-10 18:11:32,553 | INFO     | transferring file log.48442098._005764.job.log.tgz.1 from /home/radeon2/boinc3/slots/3/PanDA_Pilot-7007442545/log.48442098._005764.job.log.tgz.1 to /home/radeon2/b
[2026-02-10 11:12:11] 2026-02-10 18:11:32,553 | INFO     | executing command: /usr/bin/env mv /home/radeon2/boinc3/slots/3/PanDA_Pilot-7007442545/log.48442098._005764.job.log.tgz.1 /home/radeon2/boinc3/slots/3/log.48442098
[2026-02-10 11:12:11] 2026-02-10 18:11:32,885 | INFO     | time since job start (3332s) is within the limit (349056.0s)
[2026-02-10 11:12:11] 2026-02-10 18:11:33,072 | INFO     | adding to output.list: log.48442098._005764.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/fe/log.48442098._005764.job.log.tg
[2026-02-10 11:12:11] 2026-02-10 18:11:33,073 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-10 11:12:11] 2026-02-10 18:11:33,073 | INFO     | summary of transferred files:
[2026-02-10 11:12:11] 2026-02-10 18:11:33,073 | INFO     |  -- lfn=log.48442098._005764.job.log.tgz.1, status_code=0, status=transferred
[2026-02-10 11:12:11] 2026-02-10 18:11:33,073 | INFO     | stage-out finished correctly
[2026-02-10 11:12:11] 2026-02-10 18:11:33,924 | WARNING  | process 691620 can no longer be monitored (due to stat problems) - aborting
[2026-02-10 11:12:11] 2026-02-10 18:11:33,986 | INFO     | using path: /home/radeon2/boinc3/slots/3/PanDA_Pilot-7007442545/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 11:12:11] 2026-02-10 18:11:33,986 | INFO     | using path: /home/radeon2/boinc3/slots/3/PanDA_Pilot-7007442545/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 11:12:11] 2026-02-10 18:11:33,986 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-10 11:12:11] 2026-02-10 18:11:33,986 | WARNING  | maxPSS not found in memory monitor output
[2026-02-10 11:12:11] 2026-02-10 18:11:34,071 | INFO     | number of running child processes to parent process 691620: 1
[2026-02-10 11:12:11] 2026-02-10 18:11:34,071 | INFO     | maximum number of monitored processes: 6
[2026-02-10 11:12:11] 2026-02-10 18:11:34,720 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-10 11:12:11] 2026-02-10 18:11:34,890 | INFO     | time since job start (3334s) is within the limit (349056.0s)
[2026-02-10 11:12:11] 2026-02-10 18:11:35,346 | INFO     | job 7007442545 has state=finished
[2026-02-10 11:12:11] 2026-02-10 18:11:35,346 | INFO     | preparing for final server update for job 7007442545 in state='finished'
[2026-02-10 11:12:11] 2026-02-10 18:11:35,346 | INFO     | reading metadata from: /home/radeon2/boinc3/slots/3/PanDA_Pilot-7007442545/jobReport.json
[2026-02-10 11:12:11] 2026-02-10 18:11:35,348 | INFO     | added worker_node to metadata from /home/radeon2/boinc3/slots/3/workernode_map.json
[2026-02-10 11:12:11] 2026-02-10 18:11:35,348 | INFO     | this job has now completed (state=finished)
[2026-02-10 11:12:11] 2026-02-10 18:11:35,348 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-10 11:12:11] 2026-02-10 18:11:35,348 | INFO     | log transfer has been attempted: DONE
[2026-02-10 11:12:11] 2026-02-10 18:11:35,348 | INFO     | job 7007442545 has finished - writing final server update
[2026-02-10 11:12:11] 2026-02-10 18:11:35,348 | INFO     | total number of processed events: 400 (read)
[2026-02-10 11:12:11] 2026-02-10 18:11:35,352 | INFO     | using path: /home/radeon2/boinc3/slots/3/PanDA_Pilot-7007442545/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 11:12:11] 2026-02-10 18:11:35,352 | INFO     | extracted standard info from prmon json
[2026-02-10 11:12:11] 2026-02-10 18:11:35,353 | INFO     | extracted standard memory fields from prmon json
[2026-02-10 11:12:11] 2026-02-10 18:11:35,353 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-10 11:12:11] 2026-02-10 18:11:35,353 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-10 11:12:11] 2026-02-10 18:11:35,353 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-10 11:12:11] 2026-02-10 18:11:35,354 | INFO     | fitting pss+swap vs Time
[2026-02-10 11:12:11] 2026-02-10 18:11:35,354 | INFO     | sum of square deviations: 34277852.0
[2026-02-10 11:12:11] 2026-02-10 18:11:35,354 | INFO     | sum of deviations: 480664811.0000002
[2026-02-10 11:12:11] 2026-02-10 18:11:35,354 | INFO     | mean x: 1770745518.5
[2026-02-10 11:12:11] 2026-02-10 18:11:35,354 | INFO     | mean y: 2606350.2916666665
[2026-02-10 11:12:11] 2026-02-10 18:11:35,354 | INFO     | intersect: -24827860272.26391
[2026-02-10 11:12:11] 2026-02-10 18:11:35,354 | INFO     | chi2: 0.0009402715383020707
[2026-02-10 11:12:11] 2026-02-10 18:11:35,354 | INFO     | current memory leak: 14.02 B/s (using 48 data points, chi2=0.00)
[2026-02-10 11:12:11] 2026-02-10 18:11:35,355 | INFO     | could have reported an average CPU frequency of 3822 MHz (5 samples)
[2026-02-10 11:12:11] 2026-02-10 18:11:35,355 | INFO     | ..............................
[2026-02-10 11:12:11] 2026-02-10 18:11:35,355 | INFO     | . Timing measurements:
[2026-02-10 11:12:11] 2026-02-10 18:11:35,355 | INFO     | . get job = 0 s
[2026-02-10 11:12:11] 2026-02-10 18:11:35,355 | INFO     | . initial setup = 5 s
[2026-02-10 11:12:11] 2026-02-10 18:11:35,355 | INFO     | . payload setup = 4 s
[2026-02-10 11:12:11] 2026-02-10 18:11:35,355 | INFO     | . stage-in = 0 s
[2026-02-10 11:12:11] 2026-02-10 18:11:35,355 | INFO     | . payload execution = 3311 s
[2026-02-10 11:12:11] 2026-02-10 18:11:35,355 | INFO     | . stage-out = 0 s
[2026-02-10 11:12:11] 2026-02-10 18:11:35,355 | INFO     | . log creation = 0 s
[2026-02-10 11:12:11] 2026-02-10 18:11:35,355 | INFO     | ..............................
[2026-02-10 11:12:11] 2026-02-10 18:11:35,692 | INFO     | 
[2026-02-10 11:12:11] 2026-02-10 18:11:35,692 | INFO     | job summary report
[2026-02-10 11:12:11] 2026-02-10 18:11:35,692 | INFO     | --------------------------------------------------
[2026-02-10 11:12:11] 2026-02-10 18:11:35,692 | INFO     | PanDA job id: 7007442545
[2026-02-10 11:12:11] 2026-02-10 18:11:35,692 | INFO     | task id: 48442098
[2026-02-10 11:12:11] 2026-02-10 18:11:35,692 | INFO     | errors: (none)
[2026-02-10 11:12:11] 2026-02-10 18:11:35,692 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-10 11:12:11] 2026-02-10 18:11:35,692 | INFO     | pilot state: finished 
[2026-02-10 11:12:11] 2026-02-10 18:11:35,692 | INFO     | transexitcode: 0
[2026-02-10 11:12:11] 2026-02-10 18:11:35,692 | INFO     | exeerrorcode: 0
[2026-02-10 11:12:11] 2026-02-10 18:11:35,692 | INFO     | exeerrordiag: 
[2026-02-10 11:12:11] 2026-02-10 18:11:35,692 | INFO     | exitcode: 0
[2026-02-10 11:12:11] 2026-02-10 18:11:35,692 | INFO     | exitmsg: OK
[2026-02-10 11:12:11] 2026-02-10 18:11:35,692 | INFO     | cpuconsumptiontime: 24011 s
[2026-02-10 11:12:11] 2026-02-10 18:11:35,692 | INFO     | nevents: 400
[2026-02-10 11:12:11] 2026-02-10 18:11:35,692 | INFO     | neventsw: 0
[2026-02-10 11:12:11] 2026-02-10 18:11:35,692 | INFO     | pid: 691620
[2026-02-10 11:12:11] 2026-02-10 18:11:35,692 | INFO     | pgrp: 691620
[2026-02-10 11:12:11] 2026-02-10 18:11:35,692 | INFO     | corecount: 8
[2026-02-10 11:12:11] 2026-02-10 18:11:35,692 | INFO     | event service: False
[2026-02-10 11:12:11] 2026-02-10 18:11:35,692 | INFO     | sizes: {0: 2281793, 1: 2282254, 11: 2282254, 3319: 2307818, 3322: 2316828, 3323: 2316884, 3324: 2317238}
[2026-02-10 11:12:11] 2026-02-10 18:11:35,692 | INFO     | --------------------------------------------------
[2026-02-10 11:12:11] 2026-02-10 18:11:35,693 | INFO     | 
[2026-02-10 11:12:11] 2026-02-10 18:11:35,693 | INFO     | executing command: ls -lF /home/radeon2/boinc3/slots/3
[2026-02-10 11:12:11] 2026-02-10 18:11:35,704 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-10 11:12:11] 2026-02-10 18:11:35,705 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-10 11:12:11] 2026-02-10 18:11:35,705 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-10 11:12:11] 2026-02-10 18:11:35,705 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-10 11:12:11] 2026-02-10 18:11:35,705 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-10 11:12:11] 2026-02-10 18:11:35,705 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-10 11:12:11] 2026-02-10 18:11:35,705 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-10 11:12:11] 2026-02-10 18:11:35,705 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-10 11:12:11] 2026-02-10 18:11:35,705 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-10 11:12:11] 2026-02-10 18:11:35,705 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-10 11:12:11] 2026-02-10 18:11:35,705 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-10 11:12:11] 2026-02-10 18:11:35,705 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-10 11:12:11] 2026-02-10 18:11:35,705 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-10 11:12:11] 2026-02-10 18:11:35,705 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-10 11:12:11] 2026-02-10 18:11:35,705 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-10 11:12:11] 2026-02-10 18:11:35,705 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-10 11:12:11] 2026-02-10 18:11:35,705 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-10 11:12:11] 2026-02-10 18:11:35,705 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-10 11:12:11] 2026-02-10 18:11:35,705 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-10 11:12:11] 2026-02-10 18:11:35,705 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-10 11:12:11] 2026-02-10 18:11:35,705 | INFO     | job 7007442545 has completed (purged errors)
[2026-02-10 11:12:11] 2026-02-10 18:11:35,705 | INFO     | overall cleanup function is called
[2026-02-10 11:12:11] 2026-02-10 18:11:36,712 | INFO     | --- collectZombieJob: --- 10, [691620]
[2026-02-10 11:12:11] 2026-02-10 18:11:36,712 | INFO     | zombie collector waiting for pid 691620
[2026-02-10 11:12:11] 2026-02-10 18:11:36,712 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-10 11:12:11] 2026-02-10 18:11:36,713 | INFO     | collected zombie processes
[2026-02-10 11:12:11] 2026-02-10 18:11:36,713 | INFO     | will attempt to kill all subprocesses of pid=691620
[2026-02-10 11:12:11] 2026-02-10 18:11:36,809 | INFO     | process IDs to be killed: [691620] (in reverse order)
[2026-02-10 11:12:11] 2026-02-10 18:11:36,839 | WARNING  | found no corresponding commands to process id(s)
[2026-02-10 11:12:11] 2026-02-10 18:11:36,839 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-10 11:12:11] 2026-02-10 18:11:36,841 | INFO     | did not find any defunct processes belonging to 691620
[2026-02-10 11:12:11] 2026-02-10 18:11:36,843 | INFO     | did not find any defunct processes belonging to 691620
[2026-02-10 11:12:11] 2026-02-10 18:11:36,843 | INFO     | ready for new job
[2026-02-10 11:12:11] 2026-02-10 18:11:36,843 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-10 11:12:11] 2026-02-10 18:11:36,844 | INFO     | **************************************
[2026-02-10 11:12:11] 2026-02-10 18:11:36,844 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-10 11:12:11] 2026-02-10 18:11:36,844 | INFO     | **************************************
[2026-02-10 11:12:11] 2026-02-10 18:11:36,844 | INFO     | 
[2026-02-10 11:12:11] 2026-02-10 18:11:36,845 | INFO     | architecture information:
[2026-02-10 11:12:11] 2026-02-10 18:11:36,845 | INFO     | executing command: cat /etc/os-release
[2026-02-10 11:12:11] 2026-02-10 18:11:36,853 | INFO     | cat /etc/os-release:
[2026-02-10 11:12:11] NAME="CentOS Linux"
[2026-02-10 11:12:11] VERSION="7 (Core)"
[2026-02-10 11:12:11] ID="centos"
[2026-02-10 11:12:11] ID_LIKE="rhel fedora"
[2026-02-10 11:12:11] VERSION_ID="7"
[2026-02-10 11:12:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-10 11:12:11] ANSI_COLOR="0;31"
[2026-02-10 11:12:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-10 11:12:11] HOME_URL="https://www.centos.org/"
[2026-02-10 11:12:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-10 11:12:11] 
[2026-02-10 11:12:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-10 11:12:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-10 11:12:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-10 11:12:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-10 11:12:11] 
[2026-02-10 11:12:11] 2026-02-10 18:11:36,853 | INFO     | **************************************
[2026-02-10 11:12:11] 2026-02-10 18:11:37,356 | INFO     | executing command: df -mP /home/radeon2/boinc3/slots/3
[2026-02-10 11:12:11] 2026-02-10 18:11:37,365 | INFO     | sufficient remaining disk space (27021803520 B)
[2026-02-10 11:12:11] 2026-02-10 18:11:37,366 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-10 11:12:11] 2026-02-10 18:11:37,366 | INFO     | current server update state: UPDATING_FINAL
[2026-02-10 11:12:11] 2026-02-10 18:11:37,366 | INFO     | update_server=False
[2026-02-10 11:12:11] 2026-02-10 18:11:37,366 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-10 11:12:11] 2026-02-10 18:11:37,366 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-10 11:12:11] 2026-02-10 18:11:37,486 | INFO     | all data control threads have been joined
[2026-02-10 11:12:11] 2026-02-10 18:11:37,579 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-10 11:12:11] 2026-02-10 18:11:37,579 | INFO     | aborting loop
[2026-02-10 11:12:11] 2026-02-10 18:11:37,884 | INFO     | all payload control threads have been joined
[2026-02-10 11:12:11] 2026-02-10 18:11:38,371 | INFO     | [job] retrieve thread has finished
[2026-02-10 11:12:11] 2026-02-10 18:11:38,371 | INFO     | [job] queue monitor thread has finished
[2026-02-10 11:12:11] 2026-02-10 18:11:38,421 | INFO     | all job control threads have been joined
[2026-02-10 11:12:11] 2026-02-10 18:11:38,491 | INFO     | [data] control thread has finished
[2026-02-10 11:12:11] 2026-02-10 18:11:38,576 | INFO     | [payload] validate_pre thread has finished
[2026-02-10 11:12:11] 2026-02-10 18:11:38,584 | INFO     | [job] job monitor thread has finished
[2026-02-10 11:12:11] 2026-02-10 18:11:38,613 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-10 11:12:11] 2026-02-10 18:11:38,684 | INFO     | [data] copytool_in thread has finished
[2026-02-10 11:12:11] 2026-02-10 18:11:38,703 | INFO     | [payload] failed_post thread has finished
[2026-02-10 11:12:11] 2026-02-10 18:11:38,885 | INFO     | [payload] control thread has finished
[2026-02-10 11:12:11] 2026-02-10 18:11:39,180 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-10 11:12:11] 2026-02-10 18:11:39,221 | INFO     | [payload] execute_payloads thread has finished
[2026-02-10 11:12:11] 2026-02-10 18:11:39,426 | INFO     | [job] control thread has finished
[2026-02-10 11:12:11] 2026-02-10 18:11:39,784 | INFO     | [payload] validate_post thread has finished
[2026-02-10 11:12:11] 2026-02-10 18:11:39,790 | INFO     | [job] validate thread has finished
[2026-02-10 11:12:11] 2026-02-10 18:11:39,866 | INFO     | [job] create_data_payload thread has finished
[2026-02-10 11:12:11] 2026-02-10 18:11:40,615 | INFO     | [data] copytool_out thread has finished
[2026-02-10 11:12:11] 2026-02-10 18:11:40,760 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-10 11:12:11] 2026-02-10 18:11:44,764 | INFO     | [data] queue_monitor thread has finished
[2026-02-10 11:12:11] 2026-02-10 18:12:05,562 | INFO     | [monitor] cgroup control has ended
[2026-02-10 11:12:11] 2026-02-10 18:12:06,608 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133121453016896)>', '<ExcThread(monitor, started 133120296744704)>']
[2026-02-10 11:12:11] 2026-02-10 18:12:08,101 | INFO     | PID=687055 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-10 11:12:11] 2026-02-10 18:12:08,101 | INFO     | .. there are 3 such processes running
[2026-02-10 11:12:11] 2026-02-10 18:12:08,101 | INFO     | found 0 job(s) in 20 queues
[2026-02-10 11:12:11] 2026-02-10 18:12:08,101 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-10 11:12:11] 2026-02-10 18:12:08,101 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-10 11:12:11] 2026-02-10 18:12:08,101 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-10 11:12:11] 2026-02-10 18:12:08,102 | INFO     | [monitor] control thread has ended
[2026-02-10 11:12:11] 2026-02-10 18:12:11,633 | INFO     | all workflow threads have been joined
[2026-02-10 11:12:11] 2026-02-10 18:12:11,633 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-10 11:12:11] 2026-02-10 18:12:11,633 | INFO     | traces error code: 0
[2026-02-10 11:12:11] 2026-02-10 18:12:11,633 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-10 11:12:11] 2026-02-10 18:12:11,709 [wrapper] ==== pilot stdout END ====
[2026-02-10 11:12:11] 2026-02-10 18:12:11,711 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-10 11:12:11] 2026-02-10 18:12:11,713 [wrapper] pilotpid: 687055
[2026-02-10 11:12:11] 2026-02-10 18:12:11,715 [wrapper] Pilot exit status: 0
[2026-02-10 11:12:11] 2026-02-10 18:12:11,722 [wrapper] pandaids: 7007442545
[2026-02-10 11:12:11] 2026-02-10 18:12:11,754 [wrapper] cleanup supervisor_pilot  710582 687056
[2026-02-10 11:12:11] 2026-02-10 18:12:11,756 [wrapper] Test setup, not cleaning
[2026-02-10 11:12:11] 2026-02-10 18:12:11,758 [wrapper] apfmon messages muted
[2026-02-10 11:12:11] 2026-02-10 18:12:11,760 [wrapper] ==== wrapper stdout END ====
[2026-02-10 11:12:11] 2026-02-10 18:12:11,762 [wrapper] ==== wrapper stderr END ====
[2026-02-10 11:12:11]  *** Error codes and diagnostics ***
[2026-02-10 11:12:11]     "exeErrorCode": 0,
[2026-02-10 11:12:11]     "exeErrorDiag": "",
[2026-02-10 11:12:11]     "pilotErrorCode": 0,
[2026-02-10 11:12:11]     "pilotErrorDiag": "",
[2026-02-10 11:12:11]  *** Listing of results directory ***
[2026-02-10 11:12:11] total 666304
[2026-02-10 11:12:11] -rw-r--r-- 1 radeon2 radeon2    584627 Feb 10 00:15 pilot3.tar.gz
[2026-02-10 11:12:11] -rwx------ 1 radeon2 radeon2     36322 Feb 10 00:17 runpilot2-wrapper.sh
[2026-02-10 11:12:11] -rw-r--r-- 1 radeon2 radeon2      5111 Feb 10 00:19 queuedata.json
[2026-02-10 11:12:11] -rw-rw-r-- 1 radeon2 radeon2       100 Feb 10 10:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-10 11:12:11] -rwxr-xr-x 1 radeon2 radeon2      7986 Feb 10 10:15 run_atlas
[2026-02-10 11:12:11] -rw-rw-r-- 1 radeon2 radeon2       105 Feb 10 10:15 job.xml
[2026-02-10 11:12:11] -rw-r--r-- 2 radeon2 radeon2 495192556 Feb 10 10:15 EVNT.48442096._000100.pool.root.1
[2026-02-10 11:12:11] -rw-r--r-- 2 radeon2 radeon2     15845 Feb 10 10:15 start_atlas.sh
[2026-02-10 11:12:11] drwxrwx--x 2 radeon2 radeon2      4096 Feb 10 10:15 shared
[2026-02-10 11:12:11] -rw-r--r-- 2 radeon2 radeon2    597949 Feb 10 10:15 input.tar.gz
[2026-02-10 11:12:11] -rw-rw-r-- 1 radeon2 radeon2      9200 Feb 10 10:15 init_data.xml
[2026-02-10 11:12:11] -rw-rw-r-- 1 radeon2 radeon2         0 Feb 10 10:15 boinc_setup_complete
[2026-02-10 11:12:11] -rw-rw-r-- 1 radeon2 radeon2         0 Feb 10 10:15 boinc_lockfile
[2026-02-10 11:12:11] -rw-rw-r-- 1 radeon2 radeon2      2527 Feb 10 10:15 pandaJob.out
[2026-02-10 11:12:11] -rw------- 1 radeon2 radeon2   1009534 Feb 10 10:15 agis_schedconf.cvmfs.json
[2026-02-10 11:12:11] -rw------- 1 radeon2 radeon2   1512955 Feb 10 10:15 agis_ddmendpoints.agis.ALL.json
[2026-02-10 11:12:11] -rw------- 1 radeon2 radeon2       425 Feb 10 10:15 workernode_map.json
[2026-02-10 11:12:11] drwx------ 5 radeon2 radeon2      4096 Feb 10 10:16 pilot3
[2026-02-10 11:12:11] -rw------- 1 radeon2 radeon2 181557639 Feb 10 11:11 HITS.48442098._005764.pool.root.1
[2026-02-10 11:12:11] -rw-rw-r-- 1 radeon2 radeon2       530 Feb 10 11:11 boinc_task_state.xml
[2026-02-10 11:12:11] -rw------- 1 radeon2 radeon2      1023 Feb 10 11:11 memory_monitor_summary.json
[2026-02-10 11:12:11] -rw------- 1 radeon2 radeon2    293843 Feb 10 11:11 log.48442098._005764.job.log.tgz.1
[2026-02-10 11:12:11] -rw------- 1 radeon2 radeon2      6281 Feb 10 11:11 heartbeat.json
[2026-02-10 11:12:11] -rw-rw-r-- 1 radeon2 radeon2      8192 Feb 10 11:12 boinc_mmap_file
[2026-02-10 11:12:11] -rw-rw-r-- 1 radeon2 radeon2        27 Feb 10 11:12 wrapper_checkpoint.txt
[2026-02-10 11:12:11] -rw------- 1 radeon2 radeon2        95 Feb 10 11:12 pilot_heartbeat.json
[2026-02-10 11:12:11] -rw------- 1 radeon2 radeon2      4824 Feb 10 11:12 pilotlog.txt
[2026-02-10 11:12:11] -rw------- 1 radeon2 radeon2    505298 Feb 10 11:12 log.48442098._005764.job.log.1
[2026-02-10 11:12:11] -rw------- 1 radeon2 radeon2       357 Feb 10 11:12 output.list
[2026-02-10 11:12:11] -rw-rw-r-- 1 radeon2 radeon2       620 Feb 10 11:12 runtime_log
[2026-02-10 11:12:11] -rw------- 1 radeon2 radeon2    819200 Feb 10 11:12 result.tar.gz
[2026-02-10 11:12:11] -rw------- 1 radeon2 radeon2       653 Feb 10 11:12 wGTMDmyAx98n9Rq4apOajLDm4fhM0noT9bVooX4SDml0gKDmbQ5D2n.diag
[2026-02-10 11:12:11] -rw-rw-r-- 1 radeon2 radeon2      8910 Feb 10 11:12 runtime_log.err
[2026-02-10 11:12:11] -rw-rw-r-- 1 radeon2 radeon2     21842 Feb 10 11:12 stderr.txt
[2026-02-10 11:12:11] HITS file was successfully produced:
[2026-02-10 11:12:11] -rw------- 1 radeon2 radeon2 181557639 Feb 10 11:11 shared/HITS.pool.root.1
[2026-02-10 11:12:11]  *** Contents of shared directory: ***
[2026-02-10 11:12:11] total 662300
[2026-02-10 11:12:11] -rw-r--r-- 2 radeon2 radeon2 495192556 Feb 10 10:15 ATLAS.root_0
[2026-02-10 11:12:11] -rw-r--r-- 2 radeon2 radeon2     15845 Feb 10 10:15 start_atlas.sh
[2026-02-10 11:12:11] -rw-r--r-- 2 radeon2 radeon2    597949 Feb 10 10:15 input.tar.gz
[2026-02-10 11:12:11] -rw------- 1 radeon2 radeon2 181557639 Feb 10 11:11 HITS.pool.root.1
[2026-02-10 11:12:11] -rw------- 1 radeon2 radeon2    819200 Feb 10 11:12 result.tar.gz
11:12:12 (683192): run_atlas exited; CPU time 24016.292481
11:12:12 (683192): called boinc_finish(0)

</stderr_txt>
]]>

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