Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:49:33 (4351): wrapper (7.7.26015): starting
04:49:33 (4351): wrapper: running run_atlas (--nthreads 8)
[2026-02-11 04:49:33] Arguments: --nthreads 8
[2026-02-11 04:49:33] Threads: 8
[2026-02-11 04:49:33] Checking for CVMFS
[2026-02-11 04:49:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 04:49:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 04:49:37] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 04:49:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 04:49:38] 2.11.2.0 7073 46918 109112 156101 1 54 23779682 25165824 4542 130560 0 16289605 99.759 18922006 3379 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-11 04:49:38] CVMFS is ok
[2026-02-11 04:49:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 04:49:38] Checking for apptainer binary...
[2026-02-11 04:49:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-11 04:49:38] Running /usr/bin/apptainer --version
[2026-02-11 04:49:38] apptainer version 1.3.2-1.el7
[2026-02-11 04:49:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 04:50:01] cg-vwn391.simple-grid.lan
[2026-02-11 04:50:01] apptainer works
[2026-02-11 04:50:01] Set ATHENA_PROC_NUMBER=8
[2026-02-11 04:50:01] Set ATHENA_CORE_NUMBER=8
[2026-02-11 04:50:01] Starting ATLAS job with PandaID=7007444520
[2026-02-11 04:50:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/27 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-11 09:00:59]  *** The last 200 lines of the pilot log: ***
[2026-02-11 09:00:59] 2026-02-11 07:59:57,162 | INFO     | job 7007444520 has state=finished
[2026-02-11 09:00:59] 2026-02-11 07:59:57,163 | INFO     | preparing for final server update for job 7007444520 in state='finished'
[2026-02-11 09:00:59] 2026-02-11 07:59:57,163 | INFO     | reading metadata from: /var/lib/boinc/slots/27/PanDA_Pilot-7007444520/jobReport.json
[2026-02-11 09:00:59] 2026-02-11 07:59:57,166 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/27/workernode_map.json
[2026-02-11 09:00:59] 2026-02-11 07:59:57,166 | INFO     | this job has now completed (state=finished)
[2026-02-11 09:00:59] 2026-02-11 07:59:57,166 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-11 09:00:59] 2026-02-11 07:59:57,167 | INFO     | log transfer has been attempted: DONE
[2026-02-11 09:00:59] 2026-02-11 07:59:57,167 | INFO     | job 7007444520 has finished - writing final server update
[2026-02-11 09:00:59] 2026-02-11 07:59:57,167 | INFO     | total number of processed events: 400 (read)
[2026-02-11 09:00:59] 2026-02-11 07:59:57,169 | INFO     | using path: /var/lib/boinc/slots/27/PanDA_Pilot-7007444520/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 09:00:59] 2026-02-11 07:59:57,170 | INFO     | extracted standard info from prmon json
[2026-02-11 09:00:59] 2026-02-11 07:59:57,170 | INFO     | extracted standard memory fields from prmon json
[2026-02-11 09:00:59] 2026-02-11 07:59:57,170 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-11 09:00:59] 2026-02-11 07:59:57,171 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-11 09:00:59] 2026-02-11 07:59:57,171 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-11 09:00:59] 2026-02-11 07:59:57,176 | INFO     | fitting pss+swap vs Time
[2026-02-11 09:00:59] 2026-02-11 07:59:57,177 | INFO     | sum of square deviations: 4127772278.0
[2026-02-11 09:00:59] 2026-02-11 07:59:57,179 | INFO     | sum of deviations: 84141564266.00002
[2026-02-11 09:00:59] 2026-02-11 07:59:57,179 | INFO     | mean x: 1770789549.0
[2026-02-11 09:00:59] 2026-02-11 07:59:57,179 | INFO     | mean y: 2443848.025316456
[2026-02-11 09:00:59] 2026-02-11 07:59:57,179 | INFO     | intersect: -36093782543.35332
[2026-02-11 09:00:59] 2026-02-11 07:59:57,180 | INFO     | chi2: 4.937817765522822
[2026-02-11 09:00:59] 2026-02-11 07:59:57,180 | INFO     | sum of square deviations: 3871990738.0
[2026-02-11 09:00:59] 2026-02-11 07:59:57,183 | INFO     | sum of deviations: 97809207735.0
[2026-02-11 09:00:59] 2026-02-11 07:59:57,183 | INFO     | mean x: 1770789396.5
[2026-02-11 09:00:59] 2026-02-11 07:59:57,183 | INFO     | mean y: 2451835.75
[2026-02-11 09:00:59] 2026-02-11 07:59:57,183 | INFO     | intersect: -44728933040.099815
[2026-02-11 09:00:59] 2026-02-11 07:59:57,184 | INFO     | chi2: 4.191407236051172
[2026-02-11 09:00:59] 2026-02-11 07:59:57,184 | INFO     | current chi2=4.191407236051172 (change=15.116202438317785 %)
[2026-02-11 09:00:59] 2026-02-11 07:59:57,184 | INFO     | right removable region: 231
[2026-02-11 09:00:59] 2026-02-11 07:59:57,184 | INFO     | sum of square deviations: 3871990738.0
[2026-02-11 09:00:59] 2026-02-11 07:59:57,186 | INFO     | sum of deviations: 9114131420.499998
[2026-02-11 09:00:59] 2026-02-11 07:59:57,187 | INFO     | mean x: 1770789701.5
[2026-02-11 09:00:59] 2026-02-11 07:59:57,187 | INFO     | mean y: 2488498.4698275863
[2026-02-11 09:00:59] 2026-02-11 07:59:57,187 | INFO     | intersect: -4165705887.7273226
[2026-02-11 09:00:59] 2026-02-11 07:59:57,187 | INFO     | chi2: 1.0403823567329866
[2026-02-11 09:00:59] 2026-02-11 07:59:57,188 | INFO     | current chi2=1.0403823567329866 (change=78.93032092036249 %)
[2026-02-11 09:00:59] 2026-02-11 07:59:57,188 | INFO     | sum of square deviations: 3627000098.0
[2026-02-11 09:00:59] 2026-02-11 07:59:57,190 | INFO     | sum of deviations: -5135070402.0
[2026-02-11 09:00:59] 2026-02-11 07:59:57,190 | INFO     | mean x: 1770789854.0
[2026-02-11 09:00:59] 2026-02-11 07:59:57,190 | INFO     | mean y: 2497277.396475771
[2026-02-11 09:00:59] 2026-02-11 07:59:57,191 | INFO     | intersect: 2509563812.2034183
[2026-02-11 09:00:59] 2026-02-11 07:59:57,191 | INFO     | chi2: 0.8084806198626854
[2026-02-11 09:00:59] 2026-02-11 07:59:57,191 | INFO     | current chi2=0.8084806198626854 (change=22.290048977620124 %)
[2026-02-11 09:00:59] 2026-02-11 07:59:57,191 | INFO     | left removable region: 20
[2026-02-11 09:00:59] 2026-02-11 07:59:57,192 | INFO     | sum of square deviations: 2912836010.0
[2026-02-11 09:00:59] 2026-02-11 07:59:57,194 | INFO     | sum of deviations: 8233257352.000003
[2026-02-11 09:00:59] 2026-02-11 07:59:57,194 | INFO     | mean x: 1770789976.0
[2026-02-11 09:00:59] 2026-02-11 07:59:57,194 | INFO     | mean y: 2507881.440758294
[2026-02-11 09:00:59] 2026-02-11 07:59:57,194 | INFO     | intersect: -5002706809.224202
[2026-02-11 09:00:59] 2026-02-11 07:59:57,194 | INFO     | chi2: 0.001243232145594166
[2026-02-11 09:00:59] 2026-02-11 07:59:57,195 | INFO     | current memory leak: 2.83 B/s (using 211 data points, chi2=0.00)
[2026-02-11 09:00:59] 2026-02-11 07:59:57,195 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-02-11 09:00:59] 2026-02-11 07:59:57,195 | INFO     | ..............................
[2026-02-11 09:00:59] 2026-02-11 07:59:57,195 | INFO     | . Timing measurements:
[2026-02-11 09:00:59] 2026-02-11 07:59:57,196 | INFO     | . get job = 0 s
[2026-02-11 09:00:59] 2026-02-11 07:59:57,196 | INFO     | . initial setup = 106 s
[2026-02-11 09:00:59] 2026-02-11 07:59:57,196 | INFO     | . payload setup = 108 s
[2026-02-11 09:00:59] 2026-02-11 07:59:57,196 | INFO     | . stage-in = 0 s
[2026-02-11 09:00:59] 2026-02-11 07:59:57,196 | INFO     | . payload execution = 14552 s
[2026-02-11 09:00:59] 2026-02-11 07:59:57,196 | INFO     | . stage-out = 3 s
[2026-02-11 09:00:59] 2026-02-11 07:59:57,196 | INFO     | . log creation = 1 s
[2026-02-11 09:00:59] 2026-02-11 07:59:57,196 | INFO     | ..............................
[2026-02-11 09:00:59] 2026-02-11 07:59:57,343 | INFO     | 
[2026-02-11 09:00:59] 2026-02-11 07:59:57,343 | INFO     | job summary report
[2026-02-11 09:00:59] 2026-02-11 07:59:57,343 | INFO     | --------------------------------------------------
[2026-02-11 09:00:59] 2026-02-11 07:59:57,343 | INFO     | PanDA job id: 7007444520
[2026-02-11 09:00:59] 2026-02-11 07:59:57,343 | INFO     | task id: 48442031
[2026-02-11 09:00:59] 2026-02-11 07:59:57,343 | INFO     | errors: (none)
[2026-02-11 09:00:59] 2026-02-11 07:59:57,343 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-11 09:00:59] 2026-02-11 07:59:57,344 | INFO     | pilot state: finished 
[2026-02-11 09:00:59] 2026-02-11 07:59:57,344 | INFO     | transexitcode: 0
[2026-02-11 09:00:59] 2026-02-11 07:59:57,344 | INFO     | exeerrorcode: 0
[2026-02-11 09:00:59] 2026-02-11 07:59:57,344 | INFO     | exeerrordiag: 
[2026-02-11 09:00:59] 2026-02-11 07:59:57,344 | INFO     | exitcode: 0
[2026-02-11 09:00:59] 2026-02-11 07:59:57,344 | INFO     | exitmsg: OK
[2026-02-11 09:00:59] 2026-02-11 07:59:57,344 | INFO     | cpuconsumptiontime: 56666 s
[2026-02-11 09:00:59] 2026-02-11 07:59:57,344 | INFO     | nevents: 400
[2026-02-11 09:00:59] 2026-02-11 07:59:57,344 | INFO     | neventsw: 0
[2026-02-11 09:00:59] 2026-02-11 07:59:57,345 | INFO     | pid: 13020
[2026-02-11 09:00:59] 2026-02-11 07:59:57,345 | INFO     | pgrp: 13020
[2026-02-11 09:00:59] 2026-02-11 07:59:57,345 | INFO     | corecount: 8
[2026-02-11 09:00:59] 2026-02-11 07:59:57,345 | INFO     | event service: False
[2026-02-11 09:00:59] 2026-02-11 07:59:57,345 | INFO     | sizes: {0: 2281082, 1: 2281768, 2: 2282229, 14665: 2313046, 14668: 2322046, 14671: 2322424}
[2026-02-11 09:00:59] 2026-02-11 07:59:57,345 | INFO     | --------------------------------------------------
[2026-02-11 09:00:59] 2026-02-11 07:59:57,345 | INFO     | 
[2026-02-11 09:00:59] 2026-02-11 07:59:57,345 | INFO     | executing command: ls -lF /var/lib/boinc/slots/27
[2026-02-11 09:00:59] 2026-02-11 07:59:57,578 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-11 09:00:59] 2026-02-11 07:59:57,579 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-11 09:00:59] 2026-02-11 07:59:57,579 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-11 09:00:59] 2026-02-11 07:59:57,579 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-11 09:00:59] 2026-02-11 07:59:57,579 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-11 09:00:59] 2026-02-11 07:59:57,579 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-11 09:00:59] 2026-02-11 07:59:57,579 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-11 09:00:59] 2026-02-11 07:59:57,579 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-11 09:00:59] 2026-02-11 07:59:57,579 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-11 09:00:59] 2026-02-11 07:59:57,579 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-11 09:00:59] 2026-02-11 07:59:57,580 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-11 09:00:59] 2026-02-11 07:59:57,580 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-11 09:00:59] 2026-02-11 07:59:57,580 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-11 09:00:59] 2026-02-11 07:59:57,580 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-11 09:00:59] 2026-02-11 07:59:57,580 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-11 09:00:59] 2026-02-11 07:59:57,580 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-11 09:00:59] 2026-02-11 07:59:57,580 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-11 09:00:59] 2026-02-11 07:59:57,580 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-11 09:00:59] 2026-02-11 07:59:57,581 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-11 09:00:59] 2026-02-11 07:59:57,581 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-11 09:00:59] 2026-02-11 07:59:57,581 | INFO     | job 7007444520 has completed (purged errors)
[2026-02-11 09:00:59] 2026-02-11 07:59:57,581 | INFO     | overall cleanup function is called
[2026-02-11 09:00:59] 2026-02-11 07:59:58,594 | INFO     | --- collectZombieJob: --- 10, [13020]
[2026-02-11 09:00:59] 2026-02-11 07:59:58,594 | INFO     | zombie collector waiting for pid 13020
[2026-02-11 09:00:59] 2026-02-11 07:59:58,594 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-11 09:00:59] 2026-02-11 07:59:58,594 | INFO     | collected zombie processes
[2026-02-11 09:00:59] 2026-02-11 07:59:58,594 | INFO     | will attempt to kill all subprocesses of pid=13020
[2026-02-11 09:00:59] 2026-02-11 07:59:58,727 | INFO     | process IDs to be killed: [13020] (in reverse order)
[2026-02-11 09:00:59] 2026-02-11 07:59:59,391 | WARNING  | found no corresponding commands to process id(s)
[2026-02-11 09:00:59] 2026-02-11 07:59:59,392 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-11 09:00:59] 2026-02-11 07:59:59,395 | INFO     | did not find any defunct processes belonging to 13020
[2026-02-11 09:00:59] 2026-02-11 07:59:59,399 | INFO     | did not find any defunct processes belonging to 13020
[2026-02-11 09:00:59] 2026-02-11 07:59:59,399 | INFO     | ready for new job
[2026-02-11 09:00:59] 2026-02-11 07:59:59,400 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-11 09:00:59] 2026-02-11 07:59:59,402 | INFO     | **************************************
[2026-02-11 09:00:59] 2026-02-11 07:59:59,402 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-11 09:00:59] 2026-02-11 07:59:59,402 | INFO     | **************************************
[2026-02-11 09:00:59] 2026-02-11 07:59:59,402 | INFO     | 
[2026-02-11 09:00:59] 2026-02-11 07:59:59,403 | INFO     | pilot is running in a VM
[2026-02-11 09:00:59] 2026-02-11 07:59:59,403 | INFO     | architecture information:
[2026-02-11 09:00:59] 2026-02-11 07:59:59,403 | INFO     | executing command: cat /etc/os-release
[2026-02-11 09:00:59] 2026-02-11 07:59:59,695 | INFO     | cat /etc/os-release:
[2026-02-11 09:00:59] NAME="CentOS Linux"
[2026-02-11 09:00:59] VERSION="7 (Core)"
[2026-02-11 09:00:59] ID="centos"
[2026-02-11 09:00:59] ID_LIKE="rhel fedora"
[2026-02-11 09:00:59] VERSION_ID="7"
[2026-02-11 09:00:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-11 09:00:59] ANSI_COLOR="0;31"
[2026-02-11 09:00:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-11 09:00:59] HOME_URL="https://www.centos.org/"
[2026-02-11 09:00:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-11 09:00:59] 
[2026-02-11 09:00:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-11 09:00:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-11 09:00:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-11 09:00:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-11 09:00:59] 
[2026-02-11 09:00:59] 2026-02-11 07:59:59,695 | INFO     | **************************************
[2026-02-11 09:00:59] 2026-02-11 08:00:00,199 | INFO     | executing command: df -mP /var/lib/boinc/slots/27
[2026-02-11 09:00:59] 2026-02-11 08:00:00,432 | INFO     | sufficient remaining disk space (494440284160 B)
[2026-02-11 09:00:59] 2026-02-11 08:00:00,433 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-11 09:00:59] 2026-02-11 08:00:00,433 | INFO     | current server update state: UPDATING_FINAL
[2026-02-11 09:00:59] 2026-02-11 08:00:00,433 | INFO     | update_server=False
[2026-02-11 09:00:59] 2026-02-11 08:00:00,433 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-11 09:00:59] 2026-02-11 08:00:00,434 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-11 09:00:59] 2026-02-11 08:00:00,516 | INFO     | all payload control threads have been joined
[2026-02-11 09:00:59] 2026-02-11 08:00:00,738 | INFO     | all data control threads have been joined
[2026-02-11 09:00:59] 2026-02-11 08:00:00,867 | INFO     | all job control threads have been joined
[2026-02-11 09:00:59] 2026-02-11 08:00:01,348 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-11 09:00:59] 2026-02-11 08:00:01,348 | INFO     | aborting loop
[2026-02-11 09:00:59] 2026-02-11 08:00:01,439 | INFO     | [job] retrieve thread has finished
[2026-02-11 09:00:59] 2026-02-11 08:00:01,522 | INFO     | [payload] control thread has finished
[2026-02-11 09:00:59] 2026-02-11 08:00:01,711 | INFO     | [job] validate thread has finished
[2026-02-11 09:00:59] 2026-02-11 08:00:01,744 | INFO     | [data] control thread has finished
[2026-02-11 09:00:59] 2026-02-11 08:00:01,873 | INFO     | [job] control thread has finished
[2026-02-11 09:00:59] 2026-02-11 08:00:01,957 | INFO     | [payload] validate_post thread has finished
[2026-02-11 09:00:59] 2026-02-11 08:00:02,052 | INFO     | [payload] failed_post thread has finished
[2026-02-11 09:00:59] 2026-02-11 08:00:02,354 | INFO     | [job] job monitor thread has finished
[2026-02-11 09:00:59] 2026-02-11 08:00:02,357 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-11 09:00:59] 2026-02-11 08:00:02,438 | INFO     | [data] copytool_in thread has finished
[2026-02-11 09:00:59] 2026-02-11 08:00:02,443 | INFO     | [data] copytool_out thread has finished
[2026-02-11 09:00:59] 2026-02-11 08:00:02,735 | INFO     | [payload] execute_payloads thread has finished
[2026-02-11 09:00:59] 2026-02-11 08:00:02,799 | INFO     | [payload] validate_pre thread has finished
[2026-02-11 09:00:59] 2026-02-11 08:00:02,918 | INFO     | [job] create_data_payload thread has finished
[2026-02-11 09:00:59] 2026-02-11 08:00:03,180 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-11 09:00:59] 2026-02-11 08:00:03,363 | INFO     | [job] queue monitor thread has finished
[2026-02-11 09:00:59] 2026-02-11 08:00:07,189 | INFO     | [data] queue_monitor thread has finished
[2026-02-11 09:00:59] 2026-02-11 08:00:11,205 | INFO     | job.realtimelogging is not enabled
[2026-02-11 09:00:59] 2026-02-11 08:00:12,211 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-11 09:00:59] 2026-02-11 08:00:29,069 | INFO     | PID=8519 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-11 09:00:59] 2026-02-11 08:00:29,069 | INFO     | .. there are 9 such processes running
[2026-02-11 09:00:59] 2026-02-11 08:00:29,071 | INFO     | found 0 job(s) in 20 queues
[2026-02-11 09:00:59] 2026-02-11 08:00:29,071 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-11 09:00:59] 2026-02-11 08:00:29,071 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-11 09:00:59] 2026-02-11 08:00:48,597 | INFO     | [monitor] cgroup control has ended
[2026-02-11 09:00:59] 2026-02-11 08:00:49,817 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140554298029888)>', '<ExcThread(monitor, started 140553828144896)>']
[2026-02-11 09:00:59] 2026-02-11 08:00:50,194 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-11 09:00:59] 2026-02-11 08:00:50,194 | INFO     | [monitor] control thread has ended
[2026-02-11 09:00:59] 2026-02-11 08:00:54,843 | INFO     | all workflow threads have been joined
[2026-02-11 09:00:59] 2026-02-11 08:00:54,843 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-11 09:00:59] 2026-02-11 08:00:54,843 | INFO     | traces error code: 0
[2026-02-11 09:00:59] 2026-02-11 08:00:54,843 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-11 09:00:59] 2026-02-11 08:00:55,215 [wrapper] ==== pilot stdout END ====
[2026-02-11 09:00:59] 2026-02-11 08:00:55,293 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-11 09:00:59] 2026-02-11 08:00:55,377 [wrapper] pilotpid: 8519
[2026-02-11 09:00:59] 2026-02-11 08:00:55,460 [wrapper] Pilot exit status: 0
[2026-02-11 09:00:59] 2026-02-11 08:00:56,004 [wrapper] pandaids: 7007444520
[2026-02-11 09:00:59] 2026-02-11 08:00:56,933 [wrapper] cleanup supervisor_pilot 21129 8520
[2026-02-11 09:00:59] 2026-02-11 08:00:57,070 [wrapper] Test setup, not cleaning
[2026-02-11 09:00:59] 2026-02-11 08:00:57,138 [wrapper] apfmon messages muted
[2026-02-11 09:00:59] 2026-02-11 08:00:57,190 [wrapper] ==== wrapper stdout END ====
[2026-02-11 09:00:59] 2026-02-11 08:00:57,239 [wrapper] ==== wrapper stderr END ====
[2026-02-11 09:00:59]  *** Error codes and diagnostics ***
[2026-02-11 09:00:59]     "exeErrorCode": 0,
[2026-02-11 09:00:59]     "exeErrorDiag": "",
[2026-02-11 09:00:59]     "pilotErrorCode": 0,
[2026-02-11 09:00:59]     "pilotErrorDiag": "",
[2026-02-11 09:00:59]  *** Listing of results directory ***
[2026-02-11 09:00:59] total 677712
[2026-02-11 09:00:59] -rw-r--r--. 1 boinc boinc    584627 Feb 10 11:23 pilot3.tar.gz
[2026-02-11 09:00:59] -rwx------. 1 boinc boinc     36322 Feb 10 11:24 runpilot2-wrapper.sh
[2026-02-11 09:00:59] -rw-r--r--. 1 boinc boinc      5111 Feb 10 11:25 queuedata.json
[2026-02-11 09:00:59] -rw-r--r--. 1 boinc boinc       100 Feb 11 04:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-11 09:00:59] -rwxr-xr-x. 1 boinc boinc      7986 Feb 11 04:49 run_atlas
[2026-02-11 09:00:59] -rw-r--r--. 1 boinc boinc       105 Feb 11 04:49 job.xml
[2026-02-11 09:00:59] -rw-r--r--. 1 boinc boinc      6392 Feb 11 04:49 init_data.xml
[2026-02-11 09:00:59] -rw-r--r--. 2 boinc boinc 499314127 Feb 11 04:49 EVNT.48442027._000142.pool.root.1
[2026-02-11 09:00:59] -rw-r--r--. 2 boinc boinc     15845 Feb 11 04:49 start_atlas.sh
[2026-02-11 09:00:59] drwxrwx--x. 2 boinc boinc        68 Feb 11 04:49 shared
[2026-02-11 09:00:59] -rw-r--r--. 2 boinc boinc    597955 Feb 11 04:49 input.tar.gz
[2026-02-11 09:00:59] -rw-r--r--. 1 boinc boinc         0 Feb 11 04:49 boinc_lockfile
[2026-02-11 09:00:59] -rw-r--r--. 1 boinc boinc      2528 Feb 11 04:50 pandaJob.out
[2026-02-11 09:00:59] -rw-------. 1 boinc boinc       415 Feb 11 04:55 workernode_map.json
[2026-02-11 09:00:59] -rw-------. 1 boinc boinc   1009649 Feb 11 04:55 agis_schedconf.cvmfs.json
[2026-02-11 09:00:59] drwx------. 5 boinc boinc      4096 Feb 11 04:55 pilot3
[2026-02-11 09:00:59] -rw-------. 1 boinc boinc 185675077 Feb 11 08:58 HITS.48442031._008274.pool.root.1
[2026-02-11 09:00:59] -rw-r--r--. 1 boinc boinc       532 Feb 11 08:59 boinc_task_state.xml
[2026-02-11 09:00:59] -rw-------. 1 boinc boinc      1013 Feb 11 08:59 memory_monitor_summary.json
[2026-02-11 09:00:59] -rw-------. 1 boinc boinc   1512955 Feb 11 08:59 agis_ddmendpoints.agis.ALL.json
[2026-02-11 09:00:59] -rw-------. 1 boinc boinc    474168 Feb 11 08:59 log.48442031._008274.job.log.tgz.1
[2026-02-11 09:00:59] -rw-------. 1 boinc boinc      6312 Feb 11 08:59 heartbeat.json
[2026-02-11 09:00:59] -rw-------. 1 boinc boinc        95 Feb 11 09:00 pilot_heartbeat.json
[2026-02-11 09:00:59] -rw-r--r--. 1 boinc boinc      8192 Feb 11 09:00 boinc_mmap_file
[2026-02-11 09:00:59] -rw-r--r--. 1 boinc boinc        28 Feb 11 09:00 wrapper_checkpoint.txt
[2026-02-11 09:00:59] -rw-------. 1 boinc boinc      4952 Feb 11 09:00 pilotlog.txt
[2026-02-11 09:00:59] -rw-------. 1 boinc boinc   2059367 Feb 11 09:00 log.48442031._008274.job.log.1
[2026-02-11 09:00:59] -rw-------. 1 boinc boinc       357 Feb 11 09:00 output.list
[2026-02-11 09:00:59] -rw-r--r--. 1 boinc boinc       620 Feb 11 09:00 runtime_log
[2026-02-11 09:00:59] -rw-------. 1 boinc boinc   2549760 Feb 11 09:00 result.tar.gz
[2026-02-11 09:00:59] -rw-r--r--. 1 boinc boinc      8832 Feb 11 09:00 runtime_log.err
[2026-02-11 09:00:59] -rw-------. 1 boinc boinc       655 Feb 11 09:00 GL1LDmt5z98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmkwhKDmZNCnNn.diag
[2026-02-11 09:00:59] -rw-r--r--. 1 boinc boinc     20856 Feb 11 09:00 stderr.txt
[2026-02-11 09:00:59] HITS file was successfully produced:
[2026-02-11 09:00:59] -rw-------. 1 boinc boinc 185675077 Feb 11 08:58 shared/HITS.pool.root.1
[2026-02-11 09:00:59]  *** Contents of shared directory: ***
[2026-02-11 09:00:59] total 672028
[2026-02-11 09:00:59] -rw-r--r--. 2 boinc boinc 499314127 Feb 11 04:49 ATLAS.root_0
[2026-02-11 09:00:59] -rw-r--r--. 2 boinc boinc     15845 Feb 11 04:49 start_atlas.sh
[2026-02-11 09:00:59] -rw-r--r--. 2 boinc boinc    597955 Feb 11 04:49 input.tar.gz
[2026-02-11 09:00:59] -rw-------. 1 boinc boinc 185675077 Feb 11 08:58 HITS.pool.root.1
[2026-02-11 09:00:59] -rw-------. 1 boinc boinc   2549760 Feb 11 09:00 result.tar.gz
09:01:00 (4351): run_atlas exited; CPU time 56898.502685
09:01:00 (4351): called boinc_finish(0)

</stderr_txt>
]]>

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