Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:53:20 (28319): wrapper (7.7.26015): starting
00:53:20 (28319): wrapper: running run_atlas (--nthreads 4)
[2026-02-11 00:53:20] Arguments: --nthreads 4
[2026-02-11 00:53:20] Threads: 4
[2026-02-11 00:53:20] Checking for CVMFS
[2026-02-11 00:53:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 00:53:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 00:53:20] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 00:53:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 00:53:20] 2.9.2.0 3068 108 51632 156096 0 50 25291140 36864000 0 130560 0 67038 99.986 6575 7636 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-11 00:53:20] CVMFS is ok
[2026-02-11 00:53:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-11 00:53:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-11 00:53:20] Further information can be found at the LHC@home message board.
[2026-02-11 00:53:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 00:53:20] Checking for apptainer binary...
[2026-02-11 00:53:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-11 00:53:20] Running /usr/bin/apptainer --version
[2026-02-11 00:53:20] apptainer version 1.4.1-1.1
[2026-02-11 00:53:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 00:53:20] thA383a
[2026-02-11 00:53:20] apptainer works
[2026-02-11 00:53:20] Set ATHENA_PROC_NUMBER=4
[2026-02-11 00:53:20] Set ATHENA_CORE_NUMBER=4
[2026-02-11 00:53:20] Starting ATLAS job with PandaID=7010053039
[2026-02-11 00:53:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-11 02:38:47]  *** The last 200 lines of the pilot log: ***
[2026-02-11 02:38:47] 2026-02-11 01:38:06,797 | INFO     | [job] retrieve thread has finished
[2026-02-11 02:38:47] 2026-02-11 01:38:06,798 | INFO     | [job] queue monitor thread has finished
[2026-02-11 02:38:47] 2026-02-11 01:38:06,905 | INFO     | [job] job monitor thread has finished
[2026-02-11 02:38:47] 2026-02-11 01:38:06,914 | INFO     | all job control threads have been joined
[2026-02-11 02:38:47] 2026-02-11 01:38:06,922 | INFO     | [payload] failed_post thread has finished
[2026-02-11 02:38:47] 2026-02-11 01:38:07,005 | INFO     | [payload] execute_payloads thread has finished
[2026-02-11 02:38:47] 2026-02-11 01:38:07,034 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-11 02:38:47] 2026-02-11 01:38:07,035 | INFO     | [data] copytool_in thread has finished
[2026-02-11 02:38:47] 2026-02-11 01:38:07,143 | INFO     | [payload] control thread has finished
[2026-02-11 02:38:47] 2026-02-11 01:38:07,432 | INFO     | [job] create_data_payload thread has finished
[2026-02-11 02:38:47] 2026-02-11 01:38:07,438 | INFO     | [payload] validate_post thread has finished
[2026-02-11 02:38:47] 2026-02-11 01:38:07,797 | INFO     | [data] control thread has finished
[2026-02-11 02:38:47] 2026-02-11 01:38:07,798 | INFO     | [data] copytool_out thread has finished
[2026-02-11 02:38:47] 2026-02-11 01:38:07,813 | INFO     | [payload] validate_pre thread has finished
[2026-02-11 02:38:47] 2026-02-11 01:38:07,869 | INFO     | [job] validate thread has finished
[2026-02-11 02:38:47] 2026-02-11 01:38:07,920 | INFO     | [job] control thread has finished
[2026-02-11 02:38:47] 2026-02-11 01:38:09,799 | INFO     | [data] queue_monitor thread has finished
[2026-02-11 02:38:47] 2026-02-11 01:38:28,250 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-02-11 02:38:47] 2026-02-11 01:38:35,150 | INFO     | 6276s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-02-11 02:38:47] 2026-02-11 01:38:36,209 | INFO     | PID=32427 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-11 02:38:47] 2026-02-11 01:38:36,210 | INFO     | found 0 job(s) in 20 queues
[2026-02-11 02:38:47] 2026-02-11 01:38:36,210 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-11 02:38:47] 2026-02-11 01:38:36,210 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-11 02:38:47] 2026-02-11 01:38:41,202 | INFO     | [monitor] cgroup control has ended
[2026-02-11 02:38:47] 2026-02-11 01:38:41,823 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139790316369728)>', '<ExcThread(monitor, started 139789147817728)>']
[2026-02-11 02:38:47] 2026-02-11 01:38:42,242 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-11 02:38:47] 2026-02-11 01:38:42,242 | INFO     | [monitor] control thread has ended
[2026-02-11 02:38:47] 2026-02-11 01:38:46,848 | INFO     | all workflow threads have been joined
[2026-02-11 02:38:47] 2026-02-11 01:38:46,849 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-11 02:38:47] 2026-02-11 01:38:46,849 | INFO     | traces error code: 0
[2026-02-11 02:38:47] 2026-02-11 01:38:46,849 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-11 02:38:47] 2026-02-11 01:38:46,926 [wrapper] ==== pilot stdout END ====
[2026-02-11 02:38:47] 2026-02-11 01:38:46,930 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-11 02:38:47] 2026-02-11 01:38:46,934 [wrapper] pilotpid: 32427
[2026-02-11 02:38:47] 2026-02-11 01:38:46,938 [wrapper] Pilot exit status: 0
[2026-02-11 02:38:47] 2026-02-11 01:38:46,950 [wrapper] pandaids: 7010053039
[2026-02-11 02:38:47] 2026-02-11 01:38:46,972 [wrapper] cleanup supervisor_pilot   42544 32428
[2026-02-11 02:38:47] 2026-02-11 01:38:46,976 [wrapper] Test setup, not cleaning
[2026-02-11 02:38:47] 2026-02-11 01:38:46,979 [wrapper] apfmon messages muted
[2026-02-11 02:38:47] 2026-02-11 01:38:46,983 [wrapper] ==== wrapper stdout END ====
[2026-02-11 02:38:47] 2026-02-11 01:38:46,987 [wrapper] ==== wrapper stderr END ====
[2026-02-11 02:38:47]  *** Error codes and diagnostics ***
[2026-02-11 02:38:47]     "exeErrorCode": 0,
[2026-02-11 02:38:47]     "exeErrorDiag": "",
[2026-02-11 02:38:47]     "pilotErrorCode": 0,
[2026-02-11 02:38:47]     "pilotErrorDiag": "",
[2026-02-11 02:38:47]  *** Listing of results directory ***
[2026-02-11 02:38:47] total 945164
[2026-02-11 02:38:47] -rw-r--r-- 1 boinc boinc    584627 Feb 10 08:15 pilot3.tar.gz
[2026-02-11 02:38:47] -rwx------ 1 boinc boinc     36322 Feb 10 08:18 runpilot2-wrapper.sh
[2026-02-11 02:38:47] -rw-r--r-- 1 boinc boinc      5111 Feb 10 08:21 queuedata.json
[2026-02-11 02:38:47] -rw-r--r-- 1 boinc boinc       100 Feb 11 00:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-11 02:38:47] -rwxr-xr-x 1 boinc boinc      7986 Feb 11 00:53 run_atlas
[2026-02-11 02:38:47] -rw-r--r-- 1 boinc boinc       105 Feb 11 00:53 job.xml
[2026-02-11 02:38:47] -rw-r--r-- 2 boinc boinc 679926571 Feb 11 00:53 EVNT.48431094._000505.pool.root.1
[2026-02-11 02:38:47] -rw-r--r-- 2 boinc boinc    597965 Feb 11 00:53 input.tar.gz
[2026-02-11 02:38:47] -rw-r--r-- 2 boinc boinc     15845 Feb 11 00:53 start_atlas.sh
[2026-02-11 02:38:47] drwxrwx--x 2 boinc boinc      4096 Feb 11 00:53 shared
[2026-02-11 02:38:47] -rw-r--r-- 1 boinc boinc         0 Feb 11 00:53 boinc_setup_complete
[2026-02-11 02:38:47] -rw-r--r-- 1 boinc boinc      6377 Feb 11 00:53 init_data.xml
[2026-02-11 02:38:47] -rw-r--r-- 1 boinc boinc         0 Feb 11 00:53 boinc_lockfile
[2026-02-11 02:38:47] -rw-r--r-- 1 boinc boinc      2555 Feb 11 00:53 pandaJob.out
[2026-02-11 02:38:47] -rw------- 1 boinc boinc   1009657 Feb 11 00:53 agis_schedconf.cvmfs.json
[2026-02-11 02:38:47] -rw------- 1 boinc boinc   1512955 Feb 11 00:53 agis_ddmendpoints.agis.ALL.json
[2026-02-11 02:38:47] -rw------- 1 boinc boinc       428 Feb 11 00:53 workernode_map.json
[2026-02-11 02:38:47] drwx------ 5 boinc boinc      4096 Feb 11 00:53 pilot3
[2026-02-11 02:38:47] -rw------- 1 boinc boinc 281591925 Feb 11 02:37 HITS.48431096._023055.pool.root.1
[2026-02-11 02:38:47] -rw-r--r-- 1 boinc boinc       530 Feb 11 02:37 boinc_task_state.xml
[2026-02-11 02:38:47] -rw------- 1 boinc boinc      1026 Feb 11 02:37 memory_monitor_summary.json
[2026-02-11 02:38:47] -rw------- 1 boinc boinc        95 Feb 11 02:38 pilot_heartbeat.json
[2026-02-11 02:38:47] -rw------- 1 boinc boinc    295055 Feb 11 02:38 log.48431096._023055.job.log.tgz.1
[2026-02-11 02:38:47] -rw------- 1 boinc boinc      6324 Feb 11 02:38 heartbeat.json
[2026-02-11 02:38:47] -rw-r--r-- 1 boinc boinc        27 Feb 11 02:38 wrapper_checkpoint.txt
[2026-02-11 02:38:47] -rw-r--r-- 1 boinc boinc      8192 Feb 11 02:38 boinc_mmap_file
[2026-02-11 02:38:47] -rw------- 1 boinc boinc      4861 Feb 11 02:38 pilotlog.txt
[2026-02-11 02:38:47] -rw------- 1 boinc boinc    905147 Feb 11 02:38 log.48431096._023055.job.log.1
[2026-02-11 02:38:47] -rw------- 1 boinc boinc       357 Feb 11 02:38 output.list
[2026-02-11 02:38:47] -rw-r--r-- 1 boinc boinc       620 Feb 11 02:38 runtime_log
[2026-02-11 02:38:47] -rw------- 1 boinc boinc   1218560 Feb 11 02:38 result.tar.gz
[2026-02-11 02:38:47] -rw-r--r-- 1 boinc boinc      8901 Feb 11 02:38 runtime_log.err
[2026-02-11 02:38:47] -rw------- 1 boinc boinc       658 Feb 11 02:38 cmxMDmYCx98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmVphKDmvVbAkm.diag
[2026-02-11 02:38:47] -rw-r--r-- 1 boinc boinc      6621 Feb 11 02:38 stderr.txt
[2026-02-11 02:38:47] HITS file was successfully produced:
[2026-02-11 02:38:47] -rw------- 1 boinc boinc 281591925 Feb 11 02:37 shared/HITS.pool.root.1
[2026-02-11 02:38:47]  *** Contents of shared directory: ***
[2026-02-11 02:38:47] total 940788
[2026-02-11 02:38:47] -rw-r--r-- 2 boinc boinc 679926571 Feb 11 00:53 ATLAS.root_0
[2026-02-11 02:38:47] -rw-r--r-- 2 boinc boinc    597965 Feb 11 00:53 input.tar.gz
[2026-02-11 02:38:47] -rw-r--r-- 2 boinc boinc     15845 Feb 11 00:53 start_atlas.sh
[2026-02-11 02:38:47] -rw------- 1 boinc boinc 281591925 Feb 11 02:37 HITS.pool.root.1
[2026-02-11 02:38:47] -rw------- 1 boinc boinc   1218560 Feb 11 02:38 result.tar.gz
02:38:48 (28319): run_atlas exited; CPU time 23796.912030
02:38:48 (28319): called boinc_finish(0)

</stderr_txt>
]]>

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