Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:26:18 (2948483): wrapper (7.7.26015): starting
16:26:18 (2948483): wrapper: running run_atlas (--nthreads 4)
[2026-02-11 16:26:18] Arguments: --nthreads 4
[2026-02-11 16:26:18] Threads: 4
[2026-02-11 16:26:18] Checking for CVMFS
[2026-02-11 16:26:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 16:26:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 16:26:25] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 16:26:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 16:26:25] 2.13.3.0 7641 4159 51108 156105 2 50 6120077 6144000 2733 130560 0 7061916 99.996 128301 126 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2026-02-11 16:26:25] CVMFS is ok
[2026-02-11 16:26:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 16:26:25] Checking for apptainer binary...
[2026-02-11 16:26:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-11 16:26:25] Running /usr/bin/apptainer --version
[2026-02-11 16:26:25] apptainer version 1.4.0
[2026-02-11 16:26:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 16:26:25] Zen
[2026-02-11 16:26:25] apptainer works
[2026-02-11 16:26:25] Set ATHENA_PROC_NUMBER=4
[2026-02-11 16:26:25] Set ATHENA_CORE_NUMBER=4
[2026-02-11 16:26:25] Starting ATLAS job with PandaID=7007440922
[2026-02-11 16:26:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-11 17:57:01]  *** The last 200 lines of the pilot log: ***
[2026-02-11 17:57:01]  lfn=log.48318042._015092.job.log.tgz.1
[2026-02-11 17:57:01]  mtime=0
[2026-02-11 17:57:01]  protocol_id=None
[2026-02-11 17:57:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-11 17:57:01]  replicas=None
[2026-02-11 17:57:01]  scope=mc23_13p6TeV
[2026-02-11 17:57:01]  status=None
[2026-02-11 17:57:01]  status_code=0
[2026-02-11 17:57:01]  storage_token=
[2026-02-11 17:57:01]  surl=/home/michael/Boinc/BOINC/slots/2/PanDA_Pilot-7007440922/log.48318042._015092.job.log.tgz.1
[2026-02-11 17:57:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c5/39/log.48318042._015092.job.log.tgz.1
[2026-02-11 17:57:01]  workdir=None
[2026-02-11 17:57:01] ]
[2026-02-11 17:57:01] 2026-02-11 06:55:54,861 | INFO     | transferring file log.48318042._015092.job.log.tgz.1 from /home/michael/Boinc/BOINC/slots/2/PanDA_Pilot-7007440922/log.48318042._015092.job.log.tgz.1 to /home/mich
[2026-02-11 17:57:01] 2026-02-11 06:55:54,861 | INFO     | executing command: /usr/bin/env mv /home/michael/Boinc/BOINC/slots/2/PanDA_Pilot-7007440922/log.48318042._015092.job.log.tgz.1 /home/michael/Boinc/BOINC/slots/2/lo
[2026-02-11 17:57:01] 2026-02-11 06:55:54,874 | INFO     | adding to output.list: log.48318042._015092.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c5/39/log.48318042._015092.job.log.tg
[2026-02-11 17:57:01] 2026-02-11 06:55:54,875 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-11 17:57:01] 2026-02-11 06:55:54,875 | INFO     | summary of transferred files:
[2026-02-11 17:57:01] 2026-02-11 06:55:54,875 | INFO     |  -- lfn=log.48318042._015092.job.log.tgz.1, status_code=0, status=transferred
[2026-02-11 17:57:01] 2026-02-11 06:55:54,875 | INFO     | stage-out finished correctly
[2026-02-11 17:57:01] 2026-02-11 06:55:54,904 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-11 17:57:01] 2026-02-11 06:55:56,256 | INFO     | time since job start (5348s) is within the limit (349056.0s)
[2026-02-11 17:57:01] 2026-02-11 06:55:56,747 | INFO     | job 7007440922 has state=finished
[2026-02-11 17:57:01] 2026-02-11 06:55:56,748 | INFO     | preparing for final server update for job 7007440922 in state='finished'
[2026-02-11 17:57:01] 2026-02-11 06:55:56,748 | INFO     | reading metadata from: /home/michael/Boinc/BOINC/slots/2/PanDA_Pilot-7007440922/jobReport.json
[2026-02-11 17:57:01] 2026-02-11 06:55:56,749 | INFO     | added worker_node to metadata from /home/michael/Boinc/BOINC/slots/2/workernode_map.json
[2026-02-11 17:57:01] 2026-02-11 06:55:56,750 | INFO     | this job has now completed (state=finished)
[2026-02-11 17:57:01] 2026-02-11 06:55:56,750 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-11 17:57:01] 2026-02-11 06:55:56,750 | INFO     | log transfer has been attempted: DONE
[2026-02-11 17:57:01] 2026-02-11 06:55:56,750 | INFO     | job 7007440922 has finished - writing final server update
[2026-02-11 17:57:01] 2026-02-11 06:55:56,750 | INFO     | total number of processed events: 400 (read)
[2026-02-11 17:57:01] 2026-02-11 06:55:56,753 | INFO     | using path: /home/michael/Boinc/BOINC/slots/2/PanDA_Pilot-7007440922/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 17:57:01] 2026-02-11 06:55:56,753 | INFO     | extracted standard info from prmon json
[2026-02-11 17:57:01] 2026-02-11 06:55:56,753 | INFO     | extracted standard memory fields from prmon json
[2026-02-11 17:57:01] 2026-02-11 06:55:56,753 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-11 17:57:01] 2026-02-11 06:55:56,754 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-11 17:57:01] 2026-02-11 06:55:56,754 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-11 17:57:01] 2026-02-11 06:55:56,755 | INFO     | fitting pss+swap vs Time
[2026-02-11 17:57:01] 2026-02-11 06:55:56,755 | INFO     | sum of square deviations: 164765880.0
[2026-02-11 17:57:01] 2026-02-11 06:55:56,755 | INFO     | sum of deviations: -17178435821.999996
[2026-02-11 17:57:01] 2026-02-11 06:55:56,755 | INFO     | mean x: 1770790371.0
[2026-02-11 17:57:01] 2026-02-11 06:55:56,755 | INFO     | mean y: 2474473.345679012
[2026-02-11 17:57:01] 2026-02-11 06:55:56,755 | INFO     | intersect: 184624489313.06287
[2026-02-11 17:57:01] 2026-02-11 06:55:56,756 | INFO     | chi2: 0.08232090533799002
[2026-02-11 17:57:01] 2026-02-11 06:55:56,756 | INFO     | current memory leak: -104.26 B/s (using 81 data points, chi2=0.08)
[2026-02-11 17:57:01] 2026-02-11 06:55:56,756 | INFO     | could have reported an average CPU frequency of 4364 MHz (6 samples)
[2026-02-11 17:57:01] 2026-02-11 06:55:56,756 | INFO     | ..............................
[2026-02-11 17:57:01] 2026-02-11 06:55:56,756 | INFO     | . Timing measurements:
[2026-02-11 17:57:01] 2026-02-11 06:55:56,756 | INFO     | . get job = 0 s
[2026-02-11 17:57:01] 2026-02-11 06:55:56,756 | INFO     | . initial setup = 9 s
[2026-02-11 17:57:01] 2026-02-11 06:55:56,756 | INFO     | . payload setup = 3 s
[2026-02-11 17:57:01] 2026-02-11 06:55:56,756 | INFO     | . stage-in = 0 s
[2026-02-11 17:57:01] 2026-02-11 06:55:56,756 | INFO     | . payload execution = 5328 s
[2026-02-11 17:57:01] 2026-02-11 06:55:56,756 | INFO     | . stage-out = 0 s
[2026-02-11 17:57:01] 2026-02-11 06:55:56,756 | INFO     | . log creation = 0 s
[2026-02-11 17:57:01] 2026-02-11 06:55:56,756 | INFO     | ..............................
[2026-02-11 17:57:01] 2026-02-11 06:55:56,801 | INFO     | 
[2026-02-11 17:57:01] 2026-02-11 06:55:56,802 | INFO     | job summary report
[2026-02-11 17:57:01] 2026-02-11 06:55:56,802 | INFO     | --------------------------------------------------
[2026-02-11 17:57:01] 2026-02-11 06:55:56,802 | INFO     | PanDA job id: 7007440922
[2026-02-11 17:57:01] 2026-02-11 06:55:56,802 | INFO     | task id: 48318042
[2026-02-11 17:57:01] 2026-02-11 06:55:56,802 | INFO     | errors: (none)
[2026-02-11 17:57:01] 2026-02-11 06:55:56,802 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-11 17:57:01] 2026-02-11 06:55:56,802 | INFO     | pilot state: finished 
[2026-02-11 17:57:01] 2026-02-11 06:55:56,802 | INFO     | transexitcode: 0
[2026-02-11 17:57:01] 2026-02-11 06:55:56,802 | INFO     | exeerrorcode: 0
[2026-02-11 17:57:01] 2026-02-11 06:55:56,802 | INFO     | exeerrordiag: 
[2026-02-11 17:57:01] 2026-02-11 06:55:56,802 | INFO     | exitcode: 0
[2026-02-11 17:57:01] 2026-02-11 06:55:56,802 | INFO     | exitmsg: OK
[2026-02-11 17:57:01] 2026-02-11 06:55:56,802 | INFO     | cpuconsumptiontime: 20210 s
[2026-02-11 17:57:01] 2026-02-11 06:55:56,802 | INFO     | nevents: 400
[2026-02-11 17:57:01] 2026-02-11 06:55:56,802 | INFO     | neventsw: 0
[2026-02-11 17:57:01] 2026-02-11 06:55:56,802 | INFO     | pid: 2957186
[2026-02-11 17:57:01] 2026-02-11 06:55:56,802 | INFO     | pgrp: 2957186
[2026-02-11 17:57:01] 2026-02-11 06:55:56,802 | INFO     | corecount: 4
[2026-02-11 17:57:01] 2026-02-11 06:55:56,802 | INFO     | event service: False
[2026-02-11 17:57:01] 2026-02-11 06:55:56,802 | INFO     | sizes: {0: 2282244, 11: 2282244, 5335: 2308804, 5336: 2317880, 5338: 2318018}
[2026-02-11 17:57:01] 2026-02-11 06:55:56,803 | INFO     | --------------------------------------------------
[2026-02-11 17:57:01] 2026-02-11 06:55:56,803 | INFO     | 
[2026-02-11 17:57:01] 2026-02-11 06:55:56,803 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/2
[2026-02-11 17:57:01] 2026-02-11 06:55:56,831 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-11 17:57:01] 2026-02-11 06:55:56,831 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-11 17:57:01] 2026-02-11 06:55:56,831 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-11 17:57:01] 2026-02-11 06:55:56,831 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-11 17:57:01] 2026-02-11 06:55:56,832 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-11 17:57:01] 2026-02-11 06:55:56,832 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-11 17:57:01] 2026-02-11 06:55:56,832 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-11 17:57:01] 2026-02-11 06:55:56,832 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-11 17:57:01] 2026-02-11 06:55:56,832 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-11 17:57:01] 2026-02-11 06:55:56,832 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-11 17:57:01] 2026-02-11 06:55:56,832 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-11 17:57:01] 2026-02-11 06:55:56,832 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-11 17:57:01] 2026-02-11 06:55:56,832 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-11 17:57:01] 2026-02-11 06:55:56,832 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-11 17:57:01] 2026-02-11 06:55:56,832 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-11 17:57:01] 2026-02-11 06:55:56,832 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-11 17:57:01] 2026-02-11 06:55:56,832 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-11 17:57:01] 2026-02-11 06:55:56,832 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-11 17:57:01] 2026-02-11 06:55:56,832 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-11 17:57:01] 2026-02-11 06:55:56,832 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-11 17:57:01] 2026-02-11 06:55:56,832 | INFO     | job 7007440922 has completed (purged errors)
[2026-02-11 17:57:01] 2026-02-11 06:55:56,832 | INFO     | overall cleanup function is called
[2026-02-11 17:57:01] 2026-02-11 06:55:57,363 | INFO     | PID=2952667 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-11 17:57:01] 2026-02-11 06:55:57,363 | INFO     | .. there are 4 such processes running
[2026-02-11 17:57:01] 2026-02-11 06:55:57,839 | INFO     | --- collectZombieJob: --- 10, [2957186]
[2026-02-11 17:57:01] 2026-02-11 06:55:57,839 | INFO     | zombie collector waiting for pid 2957186
[2026-02-11 17:57:01] 2026-02-11 06:55:57,839 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-11 17:57:01] 2026-02-11 06:55:57,839 | INFO     | collected zombie processes
[2026-02-11 17:57:01] 2026-02-11 06:55:57,839 | INFO     | will attempt to kill all subprocesses of pid=2957186
[2026-02-11 17:57:01] 2026-02-11 06:55:57,925 | INFO     | process IDs to be killed: [2957186] (in reverse order)
[2026-02-11 17:57:01] 2026-02-11 06:55:57,961 | WARNING  | found no corresponding commands to process id(s)
[2026-02-11 17:57:01] 2026-02-11 06:55:57,961 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-11 17:57:01] 2026-02-11 06:55:57,963 | INFO     | did not find any defunct processes belonging to 2957186
[2026-02-11 17:57:01] 2026-02-11 06:55:57,965 | INFO     | did not find any defunct processes belonging to 2957186
[2026-02-11 17:57:01] 2026-02-11 06:55:57,965 | INFO     | ready for new job
[2026-02-11 17:57:01] 2026-02-11 06:55:57,965 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-11 17:57:01] 2026-02-11 06:55:57,966 | INFO     | **************************************
[2026-02-11 17:57:01] 2026-02-11 06:55:57,966 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-11 17:57:01] 2026-02-11 06:55:57,966 | INFO     | **************************************
[2026-02-11 17:57:01] 2026-02-11 06:55:57,966 | INFO     | 
[2026-02-11 17:57:01] 2026-02-11 06:55:57,967 | INFO     | architecture information:
[2026-02-11 17:57:01] 2026-02-11 06:55:57,967 | INFO     | executing command: cat /etc/os-release
[2026-02-11 17:57:01] 2026-02-11 06:55:57,976 | INFO     | cat /etc/os-release:
[2026-02-11 17:57:01] NAME="CentOS Linux"
[2026-02-11 17:57:01] VERSION="7 (Core)"
[2026-02-11 17:57:01] ID="centos"
[2026-02-11 17:57:01] ID_LIKE="rhel fedora"
[2026-02-11 17:57:01] VERSION_ID="7"
[2026-02-11 17:57:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-11 17:57:01] ANSI_COLOR="0;31"
[2026-02-11 17:57:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-11 17:57:01] HOME_URL="https://www.centos.org/"
[2026-02-11 17:57:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-11 17:57:01] 
[2026-02-11 17:57:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-11 17:57:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-11 17:57:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-11 17:57:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-11 17:57:01] 
[2026-02-11 17:57:01] 2026-02-11 06:55:57,977 | INFO     | **************************************
[2026-02-11 17:57:01] 2026-02-11 06:55:58,479 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/2
[2026-02-11 17:57:01] 2026-02-11 06:55:58,491 | INFO     | sufficient remaining disk space (189834199040 B)
[2026-02-11 17:57:01] 2026-02-11 06:55:58,491 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-11 17:57:01] 2026-02-11 06:55:58,491 | INFO     | current server update state: UPDATING_FINAL
[2026-02-11 17:57:01] 2026-02-11 06:55:58,491 | INFO     | update_server=False
[2026-02-11 17:57:01] 2026-02-11 06:55:58,491 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-11 17:57:01] 2026-02-11 06:55:58,491 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-11 17:57:01] 2026-02-11 06:55:58,492 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-11 17:57:01] 2026-02-11 06:55:58,544 | INFO     | all payload control threads have been joined
[2026-02-11 17:57:01] 2026-02-11 06:55:58,737 | INFO     | all data control threads have been joined
[2026-02-11 17:57:01] 2026-02-11 06:55:59,015 | WARNING  | process 2957186 can no longer be monitored (due to stat problems) - aborting
[2026-02-11 17:57:01] 2026-02-11 06:55:59,065 | INFO     | using path: /home/michael/Boinc/BOINC/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 17:57:01] 2026-02-11 06:55:59,153 | INFO     | number of running child processes to parent process 2957186: 1
[2026-02-11 17:57:01] 2026-02-11 06:55:59,154 | INFO     | maximum number of monitored processes: 6
[2026-02-11 17:57:01] 2026-02-11 06:55:59,154 | INFO     | aborting job monitoring since job object (job id=7007440922) has expired
[2026-02-11 17:57:01] 2026-02-11 06:55:59,154 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-11 17:57:01] 2026-02-11 06:55:59,154 | INFO     | will abort loop
[2026-02-11 17:57:01] 2026-02-11 06:55:59,496 | INFO     | [job] retrieve thread has finished
[2026-02-11 17:57:01] 2026-02-11 06:55:59,497 | INFO     | [job] queue monitor thread has finished
[2026-02-11 17:57:01] 2026-02-11 06:55:59,547 | INFO     | [payload] control thread has finished
[2026-02-11 17:57:01] 2026-02-11 06:55:59,742 | INFO     | [data] control thread has finished
[2026-02-11 17:57:01] 2026-02-11 06:56:00,030 | INFO     | all job control threads have been joined
[2026-02-11 17:57:01] 2026-02-11 06:56:00,074 | INFO     | [payload] execute_payloads thread has finished
[2026-02-11 17:57:01] 2026-02-11 06:56:00,159 | INFO     | [job] job monitor thread has finished
[2026-02-11 17:57:01] 2026-02-11 06:56:00,403 | INFO     | [payload] validate_post thread has finished
[2026-02-11 17:57:01] 2026-02-11 06:56:00,444 | INFO     | [job] validate thread has finished
[2026-02-11 17:57:01] 2026-02-11 06:56:00,497 | INFO     | [data] copytool_out thread has finished
[2026-02-11 17:57:01] 2026-02-11 06:56:00,508 | INFO     | [payload] failed_post thread has finished
[2026-02-11 17:57:01] 2026-02-11 06:56:00,602 | INFO     | [job] create_data_payload thread has finished
[2026-02-11 17:57:01] 2026-02-11 06:56:00,722 | INFO     | [payload] validate_pre thread has finished
[2026-02-11 17:57:01] 2026-02-11 06:56:00,954 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-11 17:57:01] 2026-02-11 06:56:00,982 | INFO     | [data] copytool_in thread has finished
[2026-02-11 17:57:01] 2026-02-11 06:56:01,035 | INFO     | [job] control thread has finished
[2026-02-11 17:57:01] 2026-02-11 06:56:04,959 | INFO     | [data] queue_monitor thread has finished
[2026-02-11 17:57:01] 2026-02-11 06:56:09,403 | INFO     | job.realtimelogging is not enabled
[2026-02-11 17:57:01] 2026-02-11 06:56:10,408 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-11 17:57:01] 2026-02-11 06:56:29,511 | INFO     | PID=2952667 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-11 17:57:01] 2026-02-11 06:56:29,511 | INFO     | .. there are 4 such processes running
[2026-02-11 17:57:01] 2026-02-11 06:56:29,511 | INFO     | found 0 job(s) in 20 queues
[2026-02-11 17:57:01] 2026-02-11 06:56:29,511 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-11 17:57:01] 2026-02-11 06:56:29,511 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-11 17:57:01] 2026-02-11 06:56:38,040 [wrapper] supervise_pilot (15 min periods counter: 7)
[2026-02-11 17:57:01] 2026-02-11 06:56:55,670 | INFO     | [monitor] cgroup control has ended
[2026-02-11 17:57:01] 2026-02-11 06:56:56,489 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133531589072704)>', '<ExcThread(monitor, started 133530801665792)>']
[2026-02-11 17:57:01] 2026-02-11 06:56:56,645 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-11 17:57:01] 2026-02-11 06:56:56,645 | INFO     | [monitor] control thread has ended
[2026-02-11 17:57:01] 2026-02-11 06:57:01,514 | INFO     | all workflow threads have been joined
[2026-02-11 17:57:01] 2026-02-11 06:57:01,514 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-11 17:57:01] 2026-02-11 06:57:01,515 | INFO     | traces error code: 0
[2026-02-11 17:57:01] 2026-02-11 06:57:01,515 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-11 17:57:01] 2026-02-11 06:57:01,578 [wrapper] ==== pilot stdout END ====
[2026-02-11 17:57:01] 2026-02-11 06:57:01,580 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-11 17:57:01] 2026-02-11 06:57:01,582 [wrapper] pilotpid: 2952667
[2026-02-11 17:57:01] 2026-02-11 06:57:01,584 [wrapper] Pilot exit status: 0
[2026-02-11 17:57:01] 2026-02-11 06:57:01,590 [wrapper] pandaids: 7007440922
[2026-02-11 17:57:01] 2026-02-11 06:57:01,613 [wrapper] cleanup supervisor_pilot 2999206 2952668
[2026-02-11 17:57:01] 2026-02-11 06:57:01,615 [wrapper] Test setup, not cleaning
[2026-02-11 17:57:01] 2026-02-11 06:57:01,616 [wrapper] apfmon messages muted
[2026-02-11 17:57:01] 2026-02-11 06:57:01,618 [wrapper] ==== wrapper stdout END ====
[2026-02-11 17:57:01] 2026-02-11 06:57:01,620 [wrapper] ==== wrapper stderr END ====
[2026-02-11 17:57:01]  *** Error codes and diagnostics ***
[2026-02-11 17:57:01]     "exeErrorCode": 0,
[2026-02-11 17:57:01]     "exeErrorDiag": "",
[2026-02-11 17:57:01]     "pilotErrorCode": 0,
[2026-02-11 17:57:01]     "pilotErrorDiag": "",
[2026-02-11 17:57:01]  *** Listing of results directory ***
[2026-02-11 17:57:01] total 673288
[2026-02-11 17:57:01] -rw-r--r-- 1 michael michael    584627 Feb 10 18:15 pilot3.tar.gz
[2026-02-11 17:57:01] -rwx------ 1 michael michael     36322 Feb 10 18:17 runpilot2-wrapper.sh
[2026-02-11 17:57:01] -rw-r--r-- 1 michael michael      5111 Feb 10 18:19 queuedata.json
[2026-02-11 17:57:01] -rw-rw-r-- 1 michael michael       100 Feb 11 16:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-11 17:57:01] -rwxr-xr-x 1 michael michael      7986 Feb 11 16:26 run_atlas
[2026-02-11 17:57:01] -rw-rw-r-- 1 michael michael       105 Feb 11 16:26 job.xml
[2026-02-11 17:57:01] -rw-r--r-- 2 michael michael 496363164 Feb 11 16:26 EVNT.48318040._000287.pool.root.1
[2026-02-11 17:57:01] -rw-rw-r-- 1 michael michael      9823 Feb 11 16:26 init_data.xml
[2026-02-11 17:57:01] drwxrwx--x 2 michael michael      4096 Feb 11 16:26 shared
[2026-02-11 17:57:01] -rw-r--r-- 2 michael michael    597962 Feb 11 16:26 input.tar.gz
[2026-02-11 17:57:01] -rw-r--r-- 2 michael michael     15845 Feb 11 16:26 start_atlas.sh
[2026-02-11 17:57:01] -rw-rw-r-- 1 michael michael         0 Feb 11 16:26 boinc_lockfile
[2026-02-11 17:57:01] -rw-rw-r-- 1 michael michael      2537 Feb 11 16:26 pandaJob.out
[2026-02-11 17:57:01] -rw------- 1 michael michael        50 Feb 11 16:26 setup.sh.local
[2026-02-11 17:57:01] -rw------- 1 michael michael   1009641 Feb 11 16:26 agis_schedconf.cvmfs.json
[2026-02-11 17:57:01] -rw------- 1 michael michael   1512955 Feb 11 16:26 agis_ddmendpoints.agis.ALL.json
[2026-02-11 17:57:01] -rw------- 1 michael michael       417 Feb 11 16:26 workernode_map.json
[2026-02-11 17:57:01] drwx------ 5 michael michael      4096 Feb 11 16:26 pilot3
[2026-02-11 17:57:01] -rw------- 1 michael michael 186994213 Feb 11 17:55 HITS.48318042._015092.pool.root.1
[2026-02-11 17:57:01] -rw------- 1 michael michael      1024 Feb 11 17:55 memory_monitor_summary.json
[2026-02-11 17:57:01] -rw------- 1 michael michael    275736 Feb 11 17:55 log.48318042._015092.job.log.tgz.1
[2026-02-11 17:57:01] -rw-rw-r-- 1 michael michael       530 Feb 11 17:55 boinc_task_state.xml
[2026-02-11 17:57:01] -rw------- 1 michael michael      6273 Feb 11 17:55 heartbeat.json
[2026-02-11 17:57:01] -rw------- 1 michael michael        95 Feb 11 17:56 pilot_heartbeat.json
[2026-02-11 17:57:01] -rw-rw-r-- 1 michael michael      8192 Feb 11 17:57 boinc_mmap_file
[2026-02-11 17:57:01] -rw-rw-r-- 1 michael michael        27 Feb 11 17:57 wrapper_checkpoint.txt
[2026-02-11 17:57:01] -rw------- 1 michael michael      5435 Feb 11 17:57 pilotlog.txt
[2026-02-11 17:57:01] -rw------- 1 michael michael    796751 Feb 11 17:57 log.48318042._015092.job.log.1
[2026-02-11 17:57:01] -rw------- 1 michael michael       357 Feb 11 17:57 output.list
[2026-02-11 17:57:01] -rw-rw-r-- 1 michael michael       620 Feb 11 17:57 runtime_log
[2026-02-11 17:57:01] -rw------- 1 michael michael   1085440 Feb 11 17:57 result.tar.gz
[2026-02-11 17:57:01] -rw------- 1 michael michael       640 Feb 11 17:57 9WiNDmmAx98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmlmhKDmrI0lFn.diag
[2026-02-11 17:57:01] -rw-rw-r-- 1 michael michael      9444 Feb 11 17:57 runtime_log.err
[2026-02-11 17:57:01] -rw-rw-r-- 1 michael michael     21435 Feb 11 17:57 stderr.txt
[2026-02-11 17:57:01] HITS file was successfully produced:
[2026-02-11 17:57:01] -rw------- 1 michael michael 186994213 Feb 11 17:55 shared/HITS.pool.root.1
[2026-02-11 17:57:01]  *** Contents of shared directory: ***
[2026-02-11 17:57:01] total 669012
[2026-02-11 17:57:01] -rw-r--r-- 2 michael michael 496363164 Feb 11 16:26 ATLAS.root_0
[2026-02-11 17:57:01] -rw-r--r-- 2 michael michael    597962 Feb 11 16:26 input.tar.gz
[2026-02-11 17:57:01] -rw-r--r-- 2 michael michael     15845 Feb 11 16:26 start_atlas.sh
[2026-02-11 17:57:01] -rw------- 1 michael michael 186994213 Feb 11 17:55 HITS.pool.root.1
[2026-02-11 17:57:01] -rw------- 1 michael michael   1085440 Feb 11 17:57 result.tar.gz
17:57:02 (2948483): run_atlas exited; CPU time 20272.845703
17:57:02 (2948483): called boinc_finish(0)

</stderr_txt>
]]>

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