Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:12:07 (4173405): wrapper (7.7.26015): starting
09:12:07 (4173405): wrapper: running run_atlas (--nthreads 9)
[2026-02-10 09:12:07] Arguments: --nthreads 9
[2026-02-10 09:12:07] Threads: 9
[2026-02-10 09:12:07] Checking for CVMFS
[2026-02-10 09:12:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 09:12:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 09:12:07] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 09:12:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 09:12:07] 2.13.3.0 12130 137897 399176 156085 0 917 26553134 40960000 11482 16776704 0 347060238 99.572 398789304 37413 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-10 09:12:07] CVMFS is ok
[2026-02-10 09:12:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-10 09:12:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-10 09:12:07] Further information can be found at the LHC@home message board.
[2026-02-10 09:12:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 09:12:07] Checking for apptainer binary...
[2026-02-10 09:12:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 09:12:07] Running /usr/bin/apptainer --version
[2026-02-10 09:12:07] apptainer version 1.4.5-2.el9
[2026-02-10 09:12:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 09:12:08] c6-5-7-4.aglt2.org
[2026-02-10 09:12:08] apptainer works
[2026-02-10 09:12:08] Set ATHENA_PROC_NUMBER=9
[2026-02-10 09:12:08] Set ATHENA_CORE_NUMBER=9
[2026-02-10 09:12:08] Starting ATLAS job with PandaID=7007440780
[2026-02-10 09:12:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-10 15:36:29]  *** The last 200 lines of the pilot log: ***
[2026-02-10 15:36:29] 2026-02-10 20:35:45,629 | INFO     | total number of processed events: 400 (read)
[2026-02-10 15:36:29] 2026-02-10 20:35:45,660 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7007440780/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 15:36:29] 2026-02-10 20:35:45,660 | INFO     | extracted standard info from prmon json
[2026-02-10 15:36:29] 2026-02-10 20:35:45,661 | INFO     | extracted standard memory fields from prmon json
[2026-02-10 15:36:29] 2026-02-10 20:35:45,661 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-10 15:36:29] 2026-02-10 20:35:45,661 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-10 15:36:29] 2026-02-10 20:35:45,661 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-10 15:36:29] 2026-02-10 20:35:45,675 | INFO     | fitting pss+swap vs Time
[2026-02-10 15:36:29] 2026-02-10 20:35:45,676 | INFO     | sum of square deviations: 16616429556.679092
[2026-02-10 15:36:29] 2026-02-10 20:35:45,686 | INFO     | sum of deviations: -60326851281.24139
[2026-02-10 15:36:29] 2026-02-10 20:35:45,687 | INFO     | mean x: 1770744233.7984085
[2026-02-10 15:36:29] 2026-02-10 20:35:45,687 | INFO     | mean y: 2577487.9310344825
[2026-02-10 15:36:29] 2026-02-10 20:35:45,687 | INFO     | intersect: 6431360740.3797455
[2026-02-10 15:36:29] 2026-02-10 20:35:45,687 | INFO     | chi2: 3.157654964956404
[2026-02-10 15:36:29] 2026-02-10 20:35:45,688 | INFO     | sum of square deviations: 15964128616.674604
[2026-02-10 15:36:29] 2026-02-10 20:35:45,700 | INFO     | time since job start (23002s) is within the limit (349056.0s)
[2026-02-10 15:36:29] 2026-02-10 20:35:45,701 | INFO     | sum of deviations: -10270939786.728483
[2026-02-10 15:36:29] 2026-02-10 20:35:45,701 | INFO     | mean x: 1770744081.3037634
[2026-02-10 15:36:29] 2026-02-10 20:35:45,701 | INFO     | mean y: 2589098.448924731
[2026-02-10 15:36:29] 2026-02-10 20:35:45,701 | INFO     | intersect: 1141843627.9933798
[2026-02-10 15:36:29] 2026-02-10 20:35:45,702 | INFO     | chi2: 1.7582702343424592
[2026-02-10 15:36:29] 2026-02-10 20:35:45,702 | INFO     | current chi2=1.7582702343424592 (change=44.317214709785915 %)
[2026-02-10 15:36:29] 2026-02-10 20:35:45,702 | INFO     | sum of square deviations: 15329084455.874638
[2026-02-10 15:36:29] 2026-02-10 20:35:45,713 | INFO     | sum of deviations: -9724695370.485023
[2026-02-10 15:36:29] 2026-02-10 20:35:45,713 | INFO     | mean x: 1770743928.8038146
[2026-02-10 15:36:29] 2026-02-10 20:35:45,713 | INFO     | mean y: 2589229.6321525886
[2026-02-10 15:36:29] 2026-02-10 20:35:45,713 | INFO     | intersect: 1125940421.0435636
[2026-02-10 15:36:29] 2026-02-10 20:35:45,714 | INFO     | chi2: 1.758350672292878
[2026-02-10 15:36:29] 2026-02-10 20:35:45,714 | INFO     | current chi2=1.758350672292878 (change=-0.004574834337041391 %)
[2026-02-10 15:36:29] 2026-02-10 20:35:45,714 | INFO     | right removable region: 366
[2026-02-10 15:36:29] 2026-02-10 20:35:45,715 | INFO     | sum of square deviations: 15963990633.448982
[2026-02-10 15:36:29] 2026-02-10 20:35:45,724 | INFO     | sum of deviations: -127396077360.80911
[2026-02-10 15:36:29] 2026-02-10 20:35:45,725 | INFO     | mean x: 1770744386.3091397
[2026-02-10 15:36:29] 2026-02-10 20:35:45,725 | INFO     | mean y: 2593086.5026881723
[2026-02-10 15:36:29] 2026-02-10 20:35:45,725 | INFO     | intersect: 14133513982.421576
[2026-02-10 15:36:29] 2026-02-10 20:35:45,725 | INFO     | chi2: 1.566743018103962
[2026-02-10 15:36:29] 2026-02-10 20:35:45,725 | INFO     | current chi2=1.566743018103962 (change=50.38270376302519 %)
[2026-02-10 15:36:29] 2026-02-10 20:35:45,726 | INFO     | sum of square deviations: 15328854360.13082
[2026-02-10 15:36:29] 2026-02-10 20:35:45,734 | INFO     | sum of deviations: -135795591945.80112
[2026-02-10 15:36:29] 2026-02-10 20:35:45,734 | INFO     | mean x: 1770744538.8201635
[2026-02-10 15:36:29] 2026-02-10 20:35:45,739 | INFO     | mean y: 2595089.351498638
[2026-02-10 15:36:29] 2026-02-10 20:35:45,739 | INFO     | intersect: 15689305732.20913
[2026-02-10 15:36:29] 2026-02-10 20:35:45,739 | INFO     | chi2: 1.516227850587958
[2026-02-10 15:36:29] 2026-02-10 20:35:45,740 | INFO     | current chi2=1.516227850587958 (change=3.224215262636778 %)
[2026-02-10 15:36:29] 2026-02-10 20:35:45,740 | INFO     | left removable region: 20
[2026-02-10 15:36:29] 2026-02-10 20:35:45,740 | INFO     | sum of square deviations: 12845253106.3816
[2026-02-10 15:36:29] 2026-02-10 20:35:45,748 | INFO     | sum of deviations: -82093872895.83238
[2026-02-10 15:36:29] 2026-02-10 20:35:45,749 | INFO     | mean x: 1770744508.3468208
[2026-02-10 15:36:29] 2026-02-10 20:35:45,749 | INFO     | mean y: 2607157.606936416
[2026-02-10 15:36:29] 2026-02-10 20:35:45,749 | INFO     | intersect: 11319416051.547512
[2026-02-10 15:36:29] 2026-02-10 20:35:45,749 | INFO     | chi2: 0.08955776919619347
[2026-02-10 15:36:29] 2026-02-10 20:35:45,749 | INFO     | current memory leak: -6.39 B/s (using 346 data points, chi2=0.09)
[2026-02-10 15:36:29] 2026-02-10 20:35:45,751 | INFO     | could have reported an average CPU frequency of 3135 MHz (16 samples)
[2026-02-10 15:36:29] 2026-02-10 20:35:45,751 | INFO     | ..............................
[2026-02-10 15:36:29] 2026-02-10 20:35:45,751 | INFO     | . Timing measurements:
[2026-02-10 15:36:29] 2026-02-10 20:35:45,751 | INFO     | . get job = 0 s
[2026-02-10 15:36:29] 2026-02-10 20:35:45,751 | INFO     | . initial setup = 6 s
[2026-02-10 15:36:29] 2026-02-10 20:35:45,752 | INFO     | . payload setup = 5 s
[2026-02-10 15:36:29] 2026-02-10 20:35:45,752 | INFO     | . stage-in = 0 s
[2026-02-10 15:36:29] 2026-02-10 20:35:45,752 | INFO     | . payload execution = 22966 s
[2026-02-10 15:36:29] 2026-02-10 20:35:45,752 | INFO     | . stage-out = 10 s
[2026-02-10 15:36:29] 2026-02-10 20:35:45,752 | INFO     | . log creation = 3 s
[2026-02-10 15:36:29] 2026-02-10 20:35:45,752 | INFO     | ..............................
[2026-02-10 15:36:29] 2026-02-10 20:35:46,846 | INFO     | 
[2026-02-10 15:36:29] 2026-02-10 20:35:46,846 | INFO     | job summary report
[2026-02-10 15:36:29] 2026-02-10 20:35:46,846 | INFO     | --------------------------------------------------
[2026-02-10 15:36:29] 2026-02-10 20:35:46,846 | INFO     | PanDA job id: 7007440780
[2026-02-10 15:36:29] 2026-02-10 20:35:46,846 | INFO     | task id: 48318042
[2026-02-10 15:36:29] 2026-02-10 20:35:46,846 | INFO     | errors: (none)
[2026-02-10 15:36:29] 2026-02-10 20:35:46,846 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-10 15:36:29] 2026-02-10 20:35:46,846 | INFO     | pilot state: finished 
[2026-02-10 15:36:29] 2026-02-10 20:35:46,846 | INFO     | transexitcode: 0
[2026-02-10 15:36:29] 2026-02-10 20:35:46,847 | INFO     | exeerrorcode: 0
[2026-02-10 15:36:29] 2026-02-10 20:35:46,847 | INFO     | exeerrordiag: 
[2026-02-10 15:36:29] 2026-02-10 20:35:46,847 | INFO     | exitcode: 0
[2026-02-10 15:36:29] 2026-02-10 20:35:46,847 | INFO     | exitmsg: OK
[2026-02-10 15:36:29] 2026-02-10 20:35:46,847 | INFO     | cpuconsumptiontime: 43949 s
[2026-02-10 15:36:29] 2026-02-10 20:35:46,847 | INFO     | nevents: 400
[2026-02-10 15:36:29] 2026-02-10 20:35:46,847 | INFO     | neventsw: 0
[2026-02-10 15:36:29] 2026-02-10 20:35:46,847 | INFO     | pid: 4183326
[2026-02-10 15:36:29] 2026-02-10 20:35:46,847 | INFO     | pgrp: 4183326
[2026-02-10 15:36:29] 2026-02-10 20:35:46,847 | INFO     | corecount: 9
[2026-02-10 15:36:29] 2026-02-10 20:35:46,847 | INFO     | event service: False
[2026-02-10 15:36:29] 2026-02-10 20:35:46,847 | INFO     | sizes: {0: 2282233, 11: 2282233, 22976: 2316952, 22977: 2316951, 22988: 2326005, 22990: 2326061, 22992: 2326383}
[2026-02-10 15:36:29] 2026-02-10 20:35:46,847 | INFO     | --------------------------------------------------
[2026-02-10 15:36:29] 2026-02-10 20:35:46,847 | INFO     | 
[2026-02-10 15:36:29] 2026-02-10 20:35:46,848 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-02-10 15:36:29] 2026-02-10 20:35:47,111 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-10 15:36:29] 2026-02-10 20:35:47,111 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-10 15:36:29] 2026-02-10 20:35:47,111 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-10 15:36:29] 2026-02-10 20:35:47,112 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-10 15:36:29] 2026-02-10 20:35:47,112 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-10 15:36:29] 2026-02-10 20:35:47,112 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-10 15:36:29] 2026-02-10 20:35:47,112 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-10 15:36:29] 2026-02-10 20:35:47,112 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-10 15:36:29] 2026-02-10 20:35:47,112 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-10 15:36:29] 2026-02-10 20:35:47,112 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-10 15:36:29] 2026-02-10 20:35:47,112 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-10 15:36:29] 2026-02-10 20:35:47,112 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-10 15:36:29] 2026-02-10 20:35:47,112 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-10 15:36:29] 2026-02-10 20:35:47,112 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-10 15:36:29] 2026-02-10 20:35:47,112 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-10 15:36:29] 2026-02-10 20:35:47,112 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-10 15:36:29] 2026-02-10 20:35:47,112 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-10 15:36:29] 2026-02-10 20:35:47,113 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-10 15:36:29] 2026-02-10 20:35:47,113 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-10 15:36:29] 2026-02-10 20:35:47,113 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-10 15:36:29] 2026-02-10 20:35:47,113 | INFO     | job 7007440780 has completed (purged errors)
[2026-02-10 15:36:29] 2026-02-10 20:35:47,113 | INFO     | overall cleanup function is called
[2026-02-10 15:36:29] 2026-02-10 20:35:48,153 | INFO     | --- collectZombieJob: --- 10, [4183326]
[2026-02-10 15:36:29] 2026-02-10 20:35:48,153 | INFO     | zombie collector waiting for pid 4183326
[2026-02-10 15:36:29] 2026-02-10 20:35:48,153 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-10 15:36:29] 2026-02-10 20:35:48,153 | INFO     | collected zombie processes
[2026-02-10 15:36:29] 2026-02-10 20:35:48,153 | INFO     | will attempt to kill all subprocesses of pid=4183326
[2026-02-10 15:36:29] 2026-02-10 20:35:49,102 | INFO     | process IDs to be killed: [4183326] (in reverse order)
[2026-02-10 15:36:29] 2026-02-10 20:35:49,308 | WARNING  | found no corresponding commands to process id(s)
[2026-02-10 15:36:29] 2026-02-10 20:35:49,319 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-10 15:36:29] 2026-02-10 20:35:49,483 | INFO     | did not find any defunct processes belonging to 4183326
[2026-02-10 15:36:29] 2026-02-10 20:35:49,645 | INFO     | did not find any defunct processes belonging to 4183326
[2026-02-10 15:36:29] 2026-02-10 20:35:49,657 | INFO     | ready for new job
[2026-02-10 15:36:29] 2026-02-10 20:35:49,657 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-10 15:36:29] 2026-02-10 20:35:49,660 | INFO     | **************************************
[2026-02-10 15:36:29] 2026-02-10 20:35:49,660 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-10 15:36:29] 2026-02-10 20:35:49,660 | INFO     | **************************************
[2026-02-10 15:36:29] 2026-02-10 20:35:49,660 | INFO     | 
[2026-02-10 15:36:29] 2026-02-10 20:35:49,684 | INFO     | architecture information:
[2026-02-10 15:36:29] 2026-02-10 20:35:49,703 | INFO     | executing command: cat /etc/os-release
[2026-02-10 15:36:29] 2026-02-10 20:35:49,798 | INFO     | cat /etc/os-release:
[2026-02-10 15:36:29] NAME="CentOS Linux"
[2026-02-10 15:36:29] VERSION="7 (Core)"
[2026-02-10 15:36:29] ID="centos"
[2026-02-10 15:36:29] ID_LIKE="rhel fedora"
[2026-02-10 15:36:29] VERSION_ID="7"
[2026-02-10 15:36:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-10 15:36:29] ANSI_COLOR="0;31"
[2026-02-10 15:36:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-10 15:36:29] HOME_URL="https://www.centos.org/"
[2026-02-10 15:36:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-10 15:36:29] 
[2026-02-10 15:36:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-10 15:36:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-10 15:36:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-10 15:36:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-10 15:36:29] 
[2026-02-10 15:36:29] 2026-02-10 20:35:49,799 | INFO     | **************************************
[2026-02-10 15:36:29] 2026-02-10 20:35:50,335 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-02-10 15:36:29] 2026-02-10 20:35:50,428 | INFO     | sufficient remaining disk space (71740424192 B)
[2026-02-10 15:36:29] 2026-02-10 20:35:50,428 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-10 15:36:29] 2026-02-10 20:35:50,429 | INFO     | current server update state: UPDATING_FINAL
[2026-02-10 15:36:29] 2026-02-10 20:35:50,429 | INFO     | update_server=False
[2026-02-10 15:36:29] 2026-02-10 20:35:50,429 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-10 15:36:29] 2026-02-10 20:35:50,432 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-10 15:36:29] 2026-02-10 20:35:50,510 | INFO     | all payload control threads have been joined
[2026-02-10 15:36:29] 2026-02-10 20:35:50,511 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-10 15:36:29] 2026-02-10 20:35:50,582 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-10 15:36:29] 2026-02-10 20:35:50,601 | INFO     | will abort loop
[2026-02-10 15:36:29] 2026-02-10 20:35:50,643 | INFO     | all data control threads have been joined
[2026-02-10 15:36:29] 2026-02-10 20:35:50,865 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-10 15:36:29] 2026-02-10 20:35:51,014 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-10 15:36:29] 2026-02-10 20:35:51,461 | INFO     | [job] retrieve thread has finished
[2026-02-10 15:36:29] 2026-02-10 20:35:51,516 | INFO     | [payload] control thread has finished
[2026-02-10 15:36:29] 2026-02-10 20:35:51,607 | INFO     | [job] job monitor thread has finished
[2026-02-10 15:36:29] 2026-02-10 20:35:51,618 | INFO     | all job control threads have been joined
[2026-02-10 15:36:29] 2026-02-10 20:35:51,662 | INFO     | [data] control thread has finished
[2026-02-10 15:36:29] 2026-02-10 20:35:51,690 | INFO     | [payload] validate_post thread has finished
[2026-02-10 15:36:29] 2026-02-10 20:35:51,740 | INFO     | [job] validate thread has finished
[2026-02-10 15:36:29] 2026-02-10 20:35:51,741 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-10 15:36:29] 2026-02-10 20:35:51,741 | INFO     | [data] copytool_in thread has finished
[2026-02-10 15:36:29] 2026-02-10 20:35:51,741 | INFO     | [payload] validate_pre thread has finished
[2026-02-10 15:36:29] 2026-02-10 20:35:51,835 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-10 15:36:29] 2026-02-10 20:35:52,213 | INFO     | [job] create_data_payload thread has finished
[2026-02-10 15:36:29] 2026-02-10 20:35:52,508 | INFO     | [payload] failed_post thread has finished
[2026-02-10 15:36:29] 2026-02-10 20:35:52,646 | INFO     | [payload] execute_payloads thread has finished
[2026-02-10 15:36:29] 2026-02-10 20:35:52,668 | INFO     | [job] control thread has finished
[2026-02-10 15:36:29] 2026-02-10 20:35:52,909 | INFO     | [job] queue monitor thread has finished
[2026-02-10 15:36:29] 2026-02-10 20:35:53,021 | INFO     | [data] copytool_out thread has finished
[2026-02-10 15:36:29] 2026-02-10 20:35:54,916 | INFO     | [data] queue_monitor thread has finished
[2026-02-10 15:36:29] 2026-02-10 20:36:06,255 | INFO     | [monitor] cgroup control has ended
[2026-02-10 15:36:29] 2026-02-10 20:36:07,697 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140073258673984)>', '<ExcThread(monitor, started 140072590481152)>']
[2026-02-10 15:36:29] 2026-02-10 20:36:12,723 | INFO     | all workflow threads have been joined
[2026-02-10 15:36:29] 2026-02-10 20:36:12,723 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-10 15:36:29] 2026-02-10 20:36:12,723 | INFO     | traces error code: 0
[2026-02-10 15:36:29] 2026-02-10 20:36:12,723 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-10 15:36:29] 2026-02-10 20:36:26,574 | INFO     | PID=4178281 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-10 15:36:29] 2026-02-10 20:36:26,574 | INFO     | .. there are 24 such processes running
[2026-02-10 15:36:29] 2026-02-10 20:36:26,575 | INFO     | found 0 job(s) in 20 queues
[2026-02-10 15:36:29] 2026-02-10 20:36:26,575 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-10 15:36:29] 2026-02-10 20:36:26,575 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-10 15:36:29] 2026-02-10 20:36:26,575 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-10 15:36:29] 2026-02-10 20:36:26,575 | INFO     | [monitor] control thread has ended
[2026-02-10 15:36:29] 2026-02-10 20:36:27,765 [wrapper] ==== pilot stdout END ====
[2026-02-10 15:36:29] 2026-02-10 20:36:27,782 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-10 15:36:29] 2026-02-10 20:36:27,785 [wrapper] pilotpid: 4178281
[2026-02-10 15:36:29] 2026-02-10 20:36:27,788 [wrapper] Pilot exit status: 0
[2026-02-10 15:36:29] 2026-02-10 20:36:27,937 [wrapper] pandaids: 7007440780
[2026-02-10 15:36:29] 2026-02-10 20:36:28,440 [wrapper] cleanup supervisor_pilot 1333520 4178282
[2026-02-10 15:36:29] 2026-02-10 20:36:28,514 [wrapper] Test setup, not cleaning
[2026-02-10 15:36:29] 2026-02-10 20:36:28,540 [wrapper] apfmon messages muted
[2026-02-10 15:36:29] 2026-02-10 20:36:28,555 [wrapper] ==== wrapper stdout END ====
[2026-02-10 15:36:29] 2026-02-10 20:36:28,594 [wrapper] ==== wrapper stderr END ====
[2026-02-10 15:36:29]  *** Error codes and diagnostics ***
[2026-02-10 15:36:29]     "exeErrorCode": 0,
[2026-02-10 15:36:29]     "exeErrorDiag": "",
[2026-02-10 15:36:29]     "pilotErrorCode": 0,
[2026-02-10 15:36:29]     "pilotErrorDiag": "",
[2026-02-10 15:36:29]  *** Listing of results directory ***
[2026-02-10 15:36:29] total 679252
[2026-02-10 15:36:29] -rw-r--r--. 1 boincer umatlas    584627 Feb 10 02:15 pilot3.tar.gz
[2026-02-10 15:36:29] -rwx------. 1 boincer umatlas     36322 Feb 10 02:19 runpilot2-wrapper.sh
[2026-02-10 15:36:29] -rw-r--r--. 1 boincer umatlas      5111 Feb 10 02:22 queuedata.json
[2026-02-10 15:36:29] -rw-r--r--. 1 boincer umatlas       100 Feb 10 09:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-10 15:36:29] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 10 09:12 run_atlas
[2026-02-10 15:36:29] -rw-r--r--. 1 boincer umatlas       105 Feb 10 09:12 job.xml
[2026-02-10 15:36:29] -rw-r--r--. 2 boincer umatlas 499568758 Feb 10 09:12 EVNT.48318040._000284.pool.root.1
[2026-02-10 15:36:29] -rw-r--r--. 2 boincer umatlas     15845 Feb 10 09:12 start_atlas.sh
[2026-02-10 15:36:29] drwxrwx--x. 2 boincer umatlas      4096 Feb 10 09:12 shared
[2026-02-10 15:36:29] -rw-r--r--. 2 boincer umatlas    597961 Feb 10 09:12 input.tar.gz
[2026-02-10 15:36:29] -rw-r--r--. 1 boincer umatlas         0 Feb 10 09:12 boinc_lockfile
[2026-02-10 15:36:29] -rw-r--r--. 1 boincer umatlas      2537 Feb 10 09:12 pandaJob.out
[2026-02-10 15:36:29] -rw-------. 1 boincer umatlas        57 Feb 10 09:12 setup.sh.local
[2026-02-10 15:36:29] -rw-------. 1 boincer umatlas   1009464 Feb 10 09:12 agis_schedconf.cvmfs.json
[2026-02-10 15:36:29] -rw-------. 1 boincer umatlas       440 Feb 10 09:12 workernode_map.json
[2026-02-10 15:36:29] drwx------. 5 boincer umatlas      4096 Feb 10 09:12 pilot3
[2026-02-10 15:36:29] -rw-r--r--. 1 boincer umatlas      6842 Feb 10 15:27 init_data.xml
[2026-02-10 15:36:29] -rw-------. 1 boincer umatlas 185337555 Feb 10 15:33 HITS.48318042._014950.pool.root.1
[2026-02-10 15:36:29] -rw-r--r--. 1 boincer umatlas       531 Feb 10 15:33 boinc_task_state.xml
[2026-02-10 15:36:29] -rw-------. 1 boincer umatlas      1053 Feb 10 15:35 memory_monitor_summary.json
[2026-02-10 15:36:29] -rw-------. 1 boincer umatlas   1512955 Feb 10 15:35 agis_ddmendpoints.agis.ALL.json
[2026-02-10 15:36:29] -rw-------. 1 boincer umatlas    578974 Feb 10 15:35 log.48318042._014950.job.log.tgz.1
[2026-02-10 15:36:29] -rw-------. 1 boincer umatlas      6388 Feb 10 15:35 heartbeat.json
[2026-02-10 15:36:29] -rw-r--r--. 1 boincer umatlas      8192 Feb 10 15:36 boinc_mmap_file
[2026-02-10 15:36:29] -rw-r--r--. 1 boincer umatlas        28 Feb 10 15:36 wrapper_checkpoint.txt
[2026-02-10 15:36:29] -rw-------. 1 boincer umatlas       823 Feb 10 15:36 pilotlog.txt
[2026-02-10 15:36:29] -rw-------. 1 boincer umatlas        95 Feb 10 15:36 pilot_heartbeat.json
[2026-02-10 15:36:29] -rw-------. 1 boincer umatlas   2770060 Feb 10 15:36 log.48318042._014950.job.log.1
[2026-02-10 15:36:29] -rw-------. 1 boincer umatlas       357 Feb 10 15:36 output.list
[2026-02-10 15:36:29] -rw-r--r--. 1 boincer umatlas       620 Feb 10 15:36 runtime_log
[2026-02-10 15:36:29] -rw-------. 1 boincer umatlas   3368960 Feb 10 15:36 result.tar.gz
[2026-02-10 15:36:29] -rw-------. 1 boincer umatlas       655 Feb 10 15:36 SJiKDmuCx98n9Rq4apOajLDm4fhM0noT9bVooX4SDm14gKDmOscWPn.diag
[2026-02-10 15:36:29] -rw-r--r--. 1 boincer umatlas      9342 Feb 10 15:36 runtime_log.err
[2026-02-10 15:36:29] -rw-r--r--. 1 boincer umatlas     21160 Feb 10 15:36 stderr.txt
[2026-02-10 15:36:29] HITS file was successfully produced:
[2026-02-10 15:36:29] -rw-------. 1 boincer umatlas 185337555 Feb 10 15:33 shared/HITS.pool.root.1
[2026-02-10 15:36:29]  *** Contents of shared directory: ***
[2026-02-10 15:36:29] total 672760
[2026-02-10 15:36:29] -rw-r--r--. 2 boincer umatlas 499568758 Feb 10 09:12 ATLAS.root_0
[2026-02-10 15:36:29] -rw-r--r--. 2 boincer umatlas     15845 Feb 10 09:12 start_atlas.sh
[2026-02-10 15:36:29] -rw-r--r--. 2 boincer umatlas    597961 Feb 10 09:12 input.tar.gz
[2026-02-10 15:36:29] -rw-------. 1 boincer umatlas 185337555 Feb 10 15:33 HITS.pool.root.1
[2026-02-10 15:36:29] -rw-------. 1 boincer umatlas   3368960 Feb 10 15:36 result.tar.gz
15:36:31 (4173405): run_atlas exited; CPU time 44705.840782
15:36:31 (4173405): called boinc_finish(0)

</stderr_txt>
]]>

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