Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:00:28 (347343): wrapper (7.7.26015): starting
09:00:28 (347343): wrapper: running run_atlas (--nthreads 8)
[2026-02-10 09:00:28] Arguments: --nthreads 8
[2026-02-10 09:00:28] Threads: 8
[2026-02-10 09:00:28] Checking for CVMFS
[2026-02-10 09:00:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 09:00:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 09:00:29] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 09:00:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 09:00:49] 2.13.3.0 8759 67552 200456 156085 1 1186 23846708 40960000 47208 16776704 0 533321786 99.710 389240498 45123 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-10 09:00:49] CVMFS is ok
[2026-02-10 09:00:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-10 09:00:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-10 09:00:49] Further information can be found at the LHC@home message board.
[2026-02-10 09:00:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 09:00:49] Checking for apptainer binary...
[2026-02-10 09:00:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 09:00:49] Running /usr/bin/apptainer --version
[2026-02-10 09:00:50] apptainer version 1.4.5-2.el9
[2026-02-10 09:00:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 09:00:50] c-208-39.aglt2.org
[2026-02-10 09:00:50] apptainer works
[2026-02-10 09:00:50] Set ATHENA_PROC_NUMBER=8
[2026-02-10 09:00:50] Set ATHENA_CORE_NUMBER=8
[2026-02-10 09:00:50] Starting ATLAS job with PandaID=7010049946
[2026-02-10 09:00:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-10 12:17:10]  *** The last 200 lines of the pilot log: ***
[2026-02-10 12:17:10] 2026-02-10 17:16:00,452 | INFO     | total number of processed events: 400 (read)
[2026-02-10 12:17:10] 2026-02-10 17:16:00,477 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7010049946/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 12:17:10] 2026-02-10 17:16:00,478 | INFO     | extracted standard info from prmon json
[2026-02-10 12:17:10] 2026-02-10 17:16:00,478 | INFO     | extracted standard memory fields from prmon json
[2026-02-10 12:17:10] 2026-02-10 17:16:00,478 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-10 12:17:10] 2026-02-10 17:16:00,478 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-10 12:17:10] 2026-02-10 17:16:00,478 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-10 12:17:10] 2026-02-10 17:16:00,486 | INFO     | fitting pss+swap vs Time
[2026-02-10 12:17:10] 2026-02-10 17:16:00,487 | INFO     | sum of square deviations: 2093400712.9523807
[2026-02-10 12:17:10] 2026-02-10 17:16:00,487 | INFO     | sum of deviations: 82356648882.254
[2026-02-10 12:17:10] 2026-02-10 17:16:00,487 | INFO     | mean x: 1770737965.1269841
[2026-02-10 12:17:10] 2026-02-10 17:16:00,487 | INFO     | mean y: 2482159.9894179893
[2026-02-10 12:17:10] 2026-02-10 17:16:00,487 | INFO     | intersect: -69660265136.37938
[2026-02-10 12:17:10] 2026-02-10 17:16:00,488 | INFO     | chi2: 6.504148704483417
[2026-02-10 12:17:10] 2026-02-10 17:16:00,488 | INFO     | sum of square deviations: 1931618952.869566
[2026-02-10 12:17:10] 2026-02-10 17:16:00,488 | INFO     | sum of deviations: 93669594252.86955
[2026-02-10 12:17:10] 2026-02-10 17:16:00,488 | INFO     | mean x: 1770737812.6304348
[2026-02-10 12:17:10] 2026-02-10 17:16:00,488 | INFO     | mean y: 2492558.3804347827
[2026-02-10 12:17:10] 2026-02-10 17:16:00,488 | INFO     | intersect: -85865526178.39093
[2026-02-10 12:17:10] 2026-02-10 17:16:00,489 | INFO     | chi2: 5.736136494745524
[2026-02-10 12:17:10] 2026-02-10 17:16:00,489 | INFO     | current chi2=5.736136494745524 (change=11.80803583424361 %)
[2026-02-10 12:17:10] 2026-02-10 17:16:00,489 | INFO     | right removable region: 183
[2026-02-10 12:17:10] 2026-02-10 17:16:00,489 | INFO     | sum of square deviations: 1931604312.869566
[2026-02-10 12:17:10] 2026-02-10 17:16:00,515 | INFO     | sum of deviations: 17162982699.021719
[2026-02-10 12:17:10] 2026-02-10 17:16:00,515 | INFO     | mean x: 1770738117.6304348
[2026-02-10 12:17:10] 2026-02-10 17:16:00,515 | INFO     | mean y: 2543555.1032608696
[2026-02-10 12:17:10] 2026-02-10 17:16:00,515 | INFO     | intersect: -15731086503.032583
[2026-02-10 12:17:10] 2026-02-10 17:16:00,515 | INFO     | chi2: 1.9179229320887659
[2026-02-10 12:17:10] 2026-02-10 17:16:00,515 | INFO     | current chi2=1.9179229320887659 (change=70.51231422850603 %)
[2026-02-10 12:17:10] 2026-02-10 17:16:00,515 | INFO     | sum of square deviations: 1778366212.782126
[2026-02-10 12:17:10] 2026-02-10 17:16:00,516 | INFO     | sum of deviations: -11108985573.547482
[2026-02-10 12:17:10] 2026-02-10 17:16:00,516 | INFO     | mean x: 1770738270.1340783
[2026-02-10 12:17:10] 2026-02-10 17:16:00,516 | INFO     | mean y: 2571491.1061452515
[2026-02-10 12:17:10] 2026-02-10 17:16:00,516 | INFO     | intersect: 11063907314.999172
[2026-02-10 12:17:10] 2026-02-10 17:16:00,516 | INFO     | chi2: 0.9367959477178422
[2026-02-10 12:17:10] 2026-02-10 17:16:00,516 | INFO     | current chi2=0.9367959477178422 (change=51.155704327618665 %)
[2026-02-10 12:17:10] 2026-02-10 17:16:00,517 | INFO     | sum of square deviations: 1633453850.1896548
[2026-02-10 12:17:10] 2026-02-10 17:16:00,517 | INFO     | sum of deviations: -19010986523.086205
[2026-02-10 12:17:10] 2026-02-10 17:16:00,517 | INFO     | mean x: 1770738422.637931
[2026-02-10 12:17:10] 2026-02-10 17:16:00,517 | INFO     | mean y: 2579758.3160919542
[2026-02-10 12:17:10] 2026-02-10 17:16:00,517 | INFO     | intersect: 20611355625.94901
[2026-02-10 12:17:10] 2026-02-10 17:16:00,517 | INFO     | chi2: 0.851647026316771
[2026-02-10 12:17:10] 2026-02-10 17:16:00,517 | INFO     | current chi2=0.851647026316771 (change=9.089377639656231 %)
[2026-02-10 12:17:10] 2026-02-10 17:16:00,517 | INFO     | left removable region: 30
[2026-02-10 12:17:10] 2026-02-10 17:16:00,518 | INFO     | sum of square deviations: 1110547845.385623
[2026-02-10 12:17:10] 2026-02-10 17:16:00,559 | INFO     | sum of deviations: -7481372164.300652
[2026-02-10 12:17:10] 2026-02-10 17:16:00,559 | INFO     | mean x: 1770738697.130719
[2026-02-10 12:17:10] 2026-02-10 17:16:00,559 | INFO     | mean y: 2596102.9150326797
[2026-02-10 12:17:10] 2026-02-10 17:16:00,560 | INFO     | intersect: 11931442981.5146
[2026-02-10 12:17:10] 2026-02-10 17:16:00,560 | INFO     | chi2: 0.006002117907818726
[2026-02-10 12:17:10] 2026-02-10 17:16:00,560 | INFO     | current memory leak: -6.74 B/s (using 153 data points, chi2=0.01)
[2026-02-10 12:17:10] 2026-02-10 17:16:00,592 | INFO     | could have reported an average CPU frequency of 3800 MHz (10 samples)
[2026-02-10 12:17:10] 2026-02-10 17:16:00,593 | INFO     | ..............................
[2026-02-10 12:17:10] 2026-02-10 17:16:00,593 | INFO     | . Timing measurements:
[2026-02-10 12:17:10] 2026-02-10 17:16:00,593 | INFO     | . get job = 0 s
[2026-02-10 12:17:10] 2026-02-10 17:16:00,593 | INFO     | . initial setup = 37 s
[2026-02-10 12:17:10] 2026-02-10 17:16:00,593 | INFO     | . payload setup = 37 s
[2026-02-10 12:17:10] 2026-02-10 17:16:00,593 | INFO     | . stage-in = 0 s
[2026-02-10 12:17:10] 2026-02-10 17:16:00,593 | INFO     | . payload execution = 11546 s
[2026-02-10 12:17:10] 2026-02-10 17:16:00,593 | INFO     | . stage-out = 4 s
[2026-02-10 12:17:10] 2026-02-10 17:16:00,593 | INFO     | . log creation = 0 s
[2026-02-10 12:17:10] 2026-02-10 17:16:00,593 | INFO     | ..............................
[2026-02-10 12:17:10] 2026-02-10 17:16:01,022 | INFO     | 
[2026-02-10 12:17:10] 2026-02-10 17:16:01,023 | INFO     | job summary report
[2026-02-10 12:17:10] 2026-02-10 17:16:01,023 | INFO     | --------------------------------------------------
[2026-02-10 12:17:10] 2026-02-10 17:16:01,023 | INFO     | PanDA job id: 7010049946
[2026-02-10 12:17:10] 2026-02-10 17:16:01,023 | INFO     | task id: 48431096
[2026-02-10 12:17:10] 2026-02-10 17:16:01,023 | INFO     | errors: (none)
[2026-02-10 12:17:10] 2026-02-10 17:16:01,023 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-10 12:17:10] 2026-02-10 17:16:01,023 | INFO     | pilot state: finished 
[2026-02-10 12:17:10] 2026-02-10 17:16:01,023 | INFO     | transexitcode: 0
[2026-02-10 12:17:10] 2026-02-10 17:16:01,023 | INFO     | exeerrorcode: 0
[2026-02-10 12:17:10] 2026-02-10 17:16:01,023 | INFO     | exeerrordiag: 
[2026-02-10 12:17:10] 2026-02-10 17:16:01,023 | INFO     | exitcode: 0
[2026-02-10 12:17:10] 2026-02-10 17:16:01,023 | INFO     | exitmsg: OK
[2026-02-10 12:17:10] 2026-02-10 17:16:01,023 | INFO     | cpuconsumptiontime: 34763 s
[2026-02-10 12:17:10] 2026-02-10 17:16:01,023 | INFO     | nevents: 400
[2026-02-10 12:17:10] 2026-02-10 17:16:01,023 | INFO     | neventsw: 0
[2026-02-10 12:17:10] 2026-02-10 17:16:01,023 | INFO     | pid: 395646
[2026-02-10 12:17:10] 2026-02-10 17:16:01,023 | INFO     | pgrp: 395646
[2026-02-10 12:17:10] 2026-02-10 17:16:01,023 | INFO     | corecount: 8
[2026-02-10 12:17:10] 2026-02-10 17:16:01,023 | INFO     | event service: False
[2026-02-10 12:17:10] 2026-02-10 17:16:01,023 | INFO     | sizes: {0: 2281726, 1: 2282243, 2: 2282243, 11589: 2311506, 11594: 2320504, 11596: 2320560, 11597: 2320882}
[2026-02-10 12:17:10] 2026-02-10 17:16:01,023 | INFO     | --------------------------------------------------
[2026-02-10 12:17:10] 2026-02-10 17:16:01,023 | INFO     | 
[2026-02-10 12:17:10] 2026-02-10 17:16:01,024 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-02-10 12:17:10] 2026-02-10 17:16:01,202 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-10 12:17:10] 2026-02-10 17:16:01,203 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-10 12:17:10] 2026-02-10 17:16:01,203 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-10 12:17:10] 2026-02-10 17:16:01,203 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-10 12:17:10] 2026-02-10 17:16:01,203 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-10 12:17:10] 2026-02-10 17:16:01,203 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-10 12:17:10] 2026-02-10 17:16:01,203 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-10 12:17:10] 2026-02-10 17:16:01,203 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-10 12:17:10] 2026-02-10 17:16:01,203 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-10 12:17:10] 2026-02-10 17:16:01,203 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-10 12:17:10] 2026-02-10 17:16:01,203 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-10 12:17:10] 2026-02-10 17:16:01,203 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-10 12:17:10] 2026-02-10 17:16:01,203 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-10 12:17:10] 2026-02-10 17:16:01,203 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-10 12:17:10] 2026-02-10 17:16:01,203 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-10 12:17:10] 2026-02-10 17:16:01,203 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-10 12:17:10] 2026-02-10 17:16:01,203 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-10 12:17:10] 2026-02-10 17:16:01,203 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-10 12:17:10] 2026-02-10 17:16:01,203 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-10 12:17:10] 2026-02-10 17:16:01,203 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-10 12:17:10] 2026-02-10 17:16:01,204 | INFO     | job 7010049946 has completed (purged errors)
[2026-02-10 12:17:10] 2026-02-10 17:16:01,204 | INFO     | overall cleanup function is called
[2026-02-10 12:17:10] 2026-02-10 17:16:02,214 | INFO     | --- collectZombieJob: --- 10, [395646]
[2026-02-10 12:17:10] 2026-02-10 17:16:02,214 | INFO     | zombie collector waiting for pid 395646
[2026-02-10 12:17:10] 2026-02-10 17:16:02,214 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-10 12:17:10] 2026-02-10 17:16:02,214 | INFO     | collected zombie processes
[2026-02-10 12:17:10] 2026-02-10 17:16:02,215 | INFO     | will attempt to kill all subprocesses of pid=395646
[2026-02-10 12:17:10] 2026-02-10 17:16:03,683 | INFO     | process IDs to be killed: [395646] (in reverse order)
[2026-02-10 12:17:10] 2026-02-10 17:16:04,050 | WARNING  | found no corresponding commands to process id(s)
[2026-02-10 12:17:10] 2026-02-10 17:16:04,051 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-10 12:17:10] 2026-02-10 17:16:04,102 | INFO     | did not find any defunct processes belonging to 395646
[2026-02-10 12:17:10] 2026-02-10 17:16:04,195 | INFO     | did not find any defunct processes belonging to 395646
[2026-02-10 12:17:10] 2026-02-10 17:16:04,196 | INFO     | ready for new job
[2026-02-10 12:17:10] 2026-02-10 17:16:04,196 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-10 12:17:10] 2026-02-10 17:16:04,197 | INFO     | **************************************
[2026-02-10 12:17:10] 2026-02-10 17:16:04,197 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-10 12:17:10] 2026-02-10 17:16:04,197 | INFO     | **************************************
[2026-02-10 12:17:10] 2026-02-10 17:16:04,197 | INFO     | 
[2026-02-10 12:17:10] 2026-02-10 17:16:04,224 | INFO     | architecture information:
[2026-02-10 12:17:10] 2026-02-10 17:16:04,248 | INFO     | executing command: cat /etc/os-release
[2026-02-10 12:17:10] 2026-02-10 17:16:04,317 | INFO     | cat /etc/os-release:
[2026-02-10 12:17:10] NAME="CentOS Linux"
[2026-02-10 12:17:10] VERSION="7 (Core)"
[2026-02-10 12:17:10] ID="centos"
[2026-02-10 12:17:10] ID_LIKE="rhel fedora"
[2026-02-10 12:17:10] VERSION_ID="7"
[2026-02-10 12:17:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-10 12:17:10] ANSI_COLOR="0;31"
[2026-02-10 12:17:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-10 12:17:10] HOME_URL="https://www.centos.org/"
[2026-02-10 12:17:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-10 12:17:10] 
[2026-02-10 12:17:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-10 12:17:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-10 12:17:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-10 12:17:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-10 12:17:10] 
[2026-02-10 12:17:10] 2026-02-10 17:16:04,319 | INFO     | **************************************
[2026-02-10 12:17:10] 2026-02-10 17:16:04,823 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-02-10 12:17:10] 2026-02-10 17:16:04,856 | INFO     | sufficient remaining disk space (162700197888 B)
[2026-02-10 12:17:10] 2026-02-10 17:16:04,857 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-10 12:17:10] 2026-02-10 17:16:04,857 | INFO     | current server update state: UPDATING_FINAL
[2026-02-10 12:17:10] 2026-02-10 17:16:04,857 | INFO     | update_server=False
[2026-02-10 12:17:10] 2026-02-10 17:16:04,857 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-10 12:17:10] 2026-02-10 17:16:04,872 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-10 12:17:10] 2026-02-10 17:16:04,872 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-10 12:17:10] 2026-02-10 17:16:04,873 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-10 12:17:10] 2026-02-10 17:16:04,873 | INFO     | will abort loop
[2026-02-10 12:17:10] 2026-02-10 17:16:05,123 | INFO     | all data control threads have been joined
[2026-02-10 12:17:10] 2026-02-10 17:16:05,325 | INFO     | all payload control threads have been joined
[2026-02-10 12:17:10] 2026-02-10 17:16:05,863 | INFO     | [job] retrieve thread has finished
[2026-02-10 12:17:10] 2026-02-10 17:16:05,878 | INFO     | [job] job monitor thread has finished
[2026-02-10 12:17:10] 2026-02-10 17:16:05,900 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-10 12:17:10] 2026-02-10 17:16:06,015 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-10 12:17:10] 2026-02-10 17:16:06,025 | INFO     | [payload] validate_pre thread has finished
[2026-02-10 12:17:10] 2026-02-10 17:16:06,040 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-10 12:17:10] 2026-02-10 17:16:06,054 | INFO     | all job control threads have been joined
[2026-02-10 12:17:10] 2026-02-10 17:16:06,084 | INFO     | [payload] failed_post thread has finished
[2026-02-10 12:17:10] 2026-02-10 17:16:06,145 | INFO     | [data] control thread has finished
[2026-02-10 12:17:10] 2026-02-10 17:16:06,331 | INFO     | [payload] control thread has finished
[2026-02-10 12:17:10] 2026-02-10 17:16:06,515 | INFO     | [data] copytool_in thread has finished
[2026-02-10 12:17:10] 2026-02-10 17:16:06,867 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-10 12:17:10] 2026-02-10 17:16:06,966 | INFO     | [payload] validate_post thread has finished
[2026-02-10 12:17:10] 2026-02-10 17:16:07,046 | INFO     | [job] queue monitor thread has finished
[2026-02-10 12:17:10] 2026-02-10 17:16:07,060 | INFO     | [job] control thread has finished
[2026-02-10 12:17:10] 2026-02-10 17:16:07,114 | INFO     | [job] create_data_payload thread has finished
[2026-02-10 12:17:10] 2026-02-10 17:16:07,151 | INFO     | [job] validate thread has finished
[2026-02-10 12:17:10] 2026-02-10 17:16:07,237 | INFO     | [payload] execute_payloads thread has finished
[2026-02-10 12:17:10] 2026-02-10 17:16:08,028 | INFO     | [data] copytool_out thread has finished
[2026-02-10 12:17:10] 2026-02-10 17:16:09,913 | INFO     | [data] queue_monitor thread has finished
[2026-02-10 12:17:10] 2026-02-10 17:16:34,037 | INFO     | PID=374050 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-10 12:17:10] 2026-02-10 17:16:34,038 | INFO     | .. there are 61 such processes running
[2026-02-10 12:17:10] 2026-02-10 17:16:34,038 | INFO     | found 0 job(s) in 20 queues
[2026-02-10 12:17:10] 2026-02-10 17:16:34,038 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-10 12:17:10] 2026-02-10 17:16:34,038 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-10 12:17:10] 2026-02-10 17:16:58,964 [wrapper] supervise_pilot (15 min periods counter: 14)
[2026-02-10 12:17:10] 2026-02-10 17:17:01,642 | INFO     | [monitor] cgroup control has ended
[2026-02-10 12:17:10] 2026-02-10 17:17:03,722 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140238528177984)>', '<ExcThread(monitor, started 140238148048640)>']
[2026-02-10 12:17:10] 2026-02-10 17:17:04,265 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-10 12:17:10] 2026-02-10 17:17:04,265 | INFO     | [monitor] control thread has ended
[2026-02-10 12:17:10] 2026-02-10 17:17:08,748 | INFO     | all workflow threads have been joined
[2026-02-10 12:17:10] 2026-02-10 17:17:08,748 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-10 12:17:10] 2026-02-10 17:17:08,749 | INFO     | traces error code: 0
[2026-02-10 12:17:10] 2026-02-10 17:17:08,749 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-10 12:17:10] 2026-02-10 17:17:09,211 [wrapper] ==== pilot stdout END ====
[2026-02-10 12:17:10] 2026-02-10 17:17:09,261 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-10 12:17:10] 2026-02-10 17:17:09,286 [wrapper] pilotpid: 374050
[2026-02-10 12:17:10] 2026-02-10 17:17:09,323 [wrapper] Pilot exit status: 0
[2026-02-10 12:17:10] 2026-02-10 17:17:09,434 [wrapper] pandaids: 7010049946
[2026-02-10 12:17:10] 2026-02-10 17:17:09,926 [wrapper] cleanup supervisor_pilot 2397616 374052
[2026-02-10 12:17:10] 2026-02-10 17:17:09,970 [wrapper] Test setup, not cleaning
[2026-02-10 12:17:10] 2026-02-10 17:17:10,002 [wrapper] apfmon messages muted
[2026-02-10 12:17:10] 2026-02-10 17:17:10,030 [wrapper] ==== wrapper stdout END ====
[2026-02-10 12:17:10] 2026-02-10 17:17:10,064 [wrapper] ==== wrapper stderr END ====
[2026-02-10 12:17:10]  *** Error codes and diagnostics ***
[2026-02-10 12:17:10]     "exeErrorCode": 0,
[2026-02-10 12:17:10]     "exeErrorDiag": "",
[2026-02-10 12:17:10]     "pilotErrorCode": 0,
[2026-02-10 12:17:10]     "pilotErrorDiag": "",
[2026-02-10 12:17:10]  *** Listing of results directory ***
[2026-02-10 12:17:10] total 945084
[2026-02-10 12:17:10] -rw-r--r--. 1 boincer umatlas    584627 Feb 10 02:15 pilot3.tar.gz
[2026-02-10 12:17:10] -rwx------. 1 boincer umatlas     36322 Feb 10 02:18 runpilot2-wrapper.sh
[2026-02-10 12:17:10] -rw-r--r--. 1 boincer umatlas      5111 Feb 10 02:21 queuedata.json
[2026-02-10 12:17:10] -rw-r--r--. 1 boincer umatlas       100 Feb 10 09:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-10 12:17:10] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 10 09:00 run_atlas
[2026-02-10 12:17:10] -rw-r--r--. 1 boincer umatlas       105 Feb 10 09:00 job.xml
[2026-02-10 12:17:10] -rw-r--r--. 2 boincer umatlas 677562091 Feb 10 09:00 EVNT.48431094._000503.pool.root.1
[2026-02-10 12:17:10] -rw-r--r--. 2 boincer umatlas     15845 Feb 10 09:00 start_atlas.sh
[2026-02-10 12:17:10] drwxrwx--x. 2 boincer umatlas      4096 Feb 10 09:00 shared
[2026-02-10 12:17:10] -rw-r--r--. 2 boincer umatlas    597966 Feb 10 09:00 input.tar.gz
[2026-02-10 12:17:10] -rw-r--r--. 1 boincer umatlas         0 Feb 10 09:00 boinc_lockfile
[2026-02-10 12:17:10] -rw-r--r--. 1 boincer umatlas      2556 Feb 10 09:00 pandaJob.out
[2026-02-10 12:17:10] -rw-------. 1 boincer umatlas        57 Feb 10 09:00 setup.sh.local
[2026-02-10 12:17:10] -rw-------. 1 boincer umatlas   1009464 Feb 10 09:02 agis_schedconf.cvmfs.json
[2026-02-10 12:17:10] -rw-------. 1 boincer umatlas       429 Feb 10 09:02 workernode_map.json
[2026-02-10 12:17:10] drwx------. 5 boincer umatlas      4096 Feb 10 09:02 pilot3
[2026-02-10 12:17:10] -rw-r--r--. 1 boincer umatlas      7185 Feb 10 12:10 init_data.xml
[2026-02-10 12:17:10] -rw-------. 1 boincer umatlas 282522516 Feb 10 12:14 HITS.48431096._022965.pool.root.1
[2026-02-10 12:17:10] -rw-r--r--. 1 boincer umatlas       530 Feb 10 12:14 boinc_task_state.xml
[2026-02-10 12:17:10] -rw-------. 1 boincer umatlas      1049 Feb 10 12:15 memory_monitor_summary.json
[2026-02-10 12:17:10] -rw-------. 1 boincer umatlas   1512955 Feb 10 12:15 agis_ddmendpoints.agis.ALL.json
[2026-02-10 12:17:10] -rw-------. 1 boincer umatlas    433269 Feb 10 12:15 log.48431096._022965.job.log.tgz.1
[2026-02-10 12:17:10] -rw-------. 1 boincer umatlas      6378 Feb 10 12:16 heartbeat.json
[2026-02-10 12:17:10] -rw-------. 1 boincer umatlas        95 Feb 10 12:16 pilot_heartbeat.json
[2026-02-10 12:17:10] -rw-------. 1 boincer umatlas      5006 Feb 10 12:17 pilotlog.txt
[2026-02-10 12:17:10] -rw-r--r--. 1 boincer umatlas      8192 Feb 10 12:17 boinc_mmap_file
[2026-02-10 12:17:10] -rw-r--r--. 1 boincer umatlas        27 Feb 10 12:17 wrapper_checkpoint.txt
[2026-02-10 12:17:10] -rw-------. 1 boincer umatlas   1441935 Feb 10 12:17 log.48431096._022965.job.log.1
[2026-02-10 12:17:10] -rw-------. 1 boincer umatlas       357 Feb 10 12:17 output.list
[2026-02-10 12:17:10] -rw-r--r--. 1 boincer umatlas       620 Feb 10 12:17 runtime_log
[2026-02-10 12:17:10] -rw-------. 1 boincer umatlas   1894400 Feb 10 12:17 result.tar.gz
[2026-02-10 12:17:10] -rw-------. 1 boincer umatlas       660 Feb 10 12:17 W4MODmXCx98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmrohKDmEMupEn.diag
[2026-02-10 12:17:10] -rw-r--r--. 1 boincer umatlas      9342 Feb 10 12:17 runtime_log.err
[2026-02-10 12:17:10] -rw-r--r--. 1 boincer umatlas      2142 Feb 10 12:17 stderr.txt
[2026-02-10 12:17:10] HITS file was successfully produced:
[2026-02-10 12:17:10] -rw-------. 1 boincer umatlas 282522516 Feb 10 12:14 shared/HITS.pool.root.1
[2026-02-10 12:17:10]  *** Contents of shared directory: ***
[2026-02-10 12:17:10] total 940048
[2026-02-10 12:17:10] -rw-r--r--. 2 boincer umatlas 677562091 Feb 10 09:00 ATLAS.root_0
[2026-02-10 12:17:10] -rw-r--r--. 2 boincer umatlas     15845 Feb 10 09:00 start_atlas.sh
[2026-02-10 12:17:10] -rw-r--r--. 2 boincer umatlas    597966 Feb 10 09:00 input.tar.gz
[2026-02-10 12:17:10] -rw-------. 1 boincer umatlas 282522516 Feb 10 12:14 HITS.pool.root.1
[2026-02-10 12:17:10] -rw-------. 1 boincer umatlas   1894400 Feb 10 12:17 result.tar.gz
12:17:12 (347343): run_atlas exited; CPU time 35208.557604
12:17:12 (347343): called boinc_finish(0)

</stderr_txt>
]]>

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