Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-11 01:39:02 (3060): vboxwrapper version 26210
2026-02-11 01:39:02 (3060): BOINC client version: 8.2.4
2026-02-11 01:39:03 (3060): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-02-11 01:39:04 (3060): Successfully copied 'init_data.xml' to the shared directory.
2026-02-11 01:39:04 (3060): Create VM. (boinc_3c6328599909f23c, slot#1)
2026-02-11 01:39:04 (3060): Setting Memory Size for VM. (4800MB)
2026-02-11 01:39:05 (3060): Setting CPU Count for VM. (8)
2026-02-11 01:39:05 (3060): Setting Chipset Options for VM.
2026-02-11 01:39:05 (3060): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-11 01:39:05 (3060): Setting Boot Options for VM.
2026-02-11 01:39:06 (3060): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-11 01:39:06 (3060): Enabling VM Network Access.
2026-02-11 01:39:06 (3060): Disabling USB Support for VM.
2026-02-11 01:39:07 (3060): Disabling COM Port Support for VM.
2026-02-11 01:39:07 (3060): Disabling LPT Port Support for VM.
2026-02-11 01:39:07 (3060): Disabling Audio Support for VM.
2026-02-11 01:39:08 (3060): Disabling Clipboard Support for VM.
2026-02-11 01:39:08 (3060): Disabling Drag and Drop Support for VM.
2026-02-11 01:39:08 (3060): Adding storage controller(s) to VM.
2026-02-11 01:39:08 (3060): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-11 01:39:10 (3060): Adding VirtualBox Guest Additions to VM.
2026-02-11 01:39:11 (3060): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-11 01:39:11 (3060): forwarding host port 62765 to guest port 80
2026-02-11 01:39:11 (3060): Enabling remote desktop for VM.
2026-02-11 01:39:12 (3060): Enabling shared directory for VM.
2026-02-11 01:39:12 (3060): Starting VM using VBoxManage interface. (boinc_3c6328599909f23c, slot#1)
2026-02-11 01:39:19 (3060): Successfully started VM. (PID = '2228')
2026-02-11 01:39:19 (3060): Reporting VM Process ID to BOINC.
2026-02-11 01:39:19 (3060): Guest Log: BIOS: VirtualBox 7.0.6
2026-02-11 01:39:19 (3060): Guest Log: CPUID EDX: 0x178bfbff
2026-02-11 01:39:19 (3060): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-11 01:39:19 (3060): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-11 01:39:19 (3060): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-11 01:39:19 (3060): Detected: Web Application Enabled (http://localhost:62765)
2026-02-11 01:39:19 (3060): Detected: Remote Desktop Enabled (localhost:62766)
2026-02-11 01:39:19 (3060): Preference change detected
2026-02-11 01:39:19 (3060): Setting CPU throttle for VM. (100%)
2026-02-11 01:39:20 (3060): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-11 01:39:21 (3060): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-11 01:39:21 (3060): Guest Log: BIOS: Booting from Hard Disk...
2026-02-11 01:39:24 (3060): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-11 01:39:24 (3060): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-11 01:39:24 (3060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-11 01:39:30 (3060): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-11 01:39:30 (3060): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-11 01:39:38 (3060): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-11 01:39:38 (3060): Guest Log: 00:00:00.000157 main     Log opened 2026-02-11T01:39:37.189420000Z
2026-02-11 01:39:38 (3060): Guest Log: 00:00:00.000276 main     OS Product: Linux
2026-02-11 01:39:38 (3060): Guest Log: 00:00:00.000317 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-11 01:39:38 (3060): Guest Log: 00:00:00.000353 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-11 01:39:38 (3060): Guest Log: 00:00:00.000390 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-11 01:39:38 (3060): Guest Log: 00:00:00.000392 main     Process ID: 1371
2026-02-11 01:39:38 (3060): Guest Log: 00:00:00.000393 main     Package type: LINUX_64BITS_GENERIC
2026-02-11 01:39:38 (3060): Guest Log: 00:00:00.001446 main     5.2.32 r132073 started. Verbose level = 0
2026-02-11 01:39:39 (3060): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-11 01:39:39 (3060): Guest Log: [INFO] Mounting shared directory
2026-02-11 01:39:39 (3060): Guest Log: [INFO] Checking for init_data.xml
2026-02-11 01:39:48 (3060): Guest Log: 00:00:10.005508 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 811 484 742 000ns (GuestNow=1 770 802 788 676 739 000 ns GuestLast=1 770 773 977 191 997 000 ns fSetTimeLastLoop=true )
2026-02-11 01:39:49 (3060): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-11 01:39:49 (3060): Guest Log: [INFO] Detected branch: prod
2026-02-11 01:39:49 (3060): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-11 01:39:49 (3060): Guest Log: Copying input files
2026-02-11 01:39:54 (3060): Guest Log: Copied input files into RunAtlas.
2026-02-11 01:39:54 (3060): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-11 01:39:54 (3060): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-11 01:39:54 (3060): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-11 01:39:54 (3060): Guest Log: Further information can be found at the LHC@home message board.
2026-02-11 01:40:05 (3060): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-11 01:40:05 (3060): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-11 01:40:05 (3060): Guest Log: 2.6.3.0 1650 0 30156 156110 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-11 01:40:06 (3060): Guest Log: copied the webapp to /var/www
2026-02-11 01:40:06 (3060): Guest Log: ATHENA_PROC_NUMBER=8
2026-02-11 01:40:06 (3060): Guest Log: ATHENA_CORE_NUMBER=8
2026-02-11 01:40:07 (3060): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-11 01:40:07 (3060): Guest Log:  *** Starting ATLAS job. (PandaID=7010071009 taskID=48431096) ***
2026-02-11 02:37:08 (3060): VM state change detected. (old = 'running', new = 'paused')
2026-02-11 02:37:28 (3060): VM state change detected. (old = 'paused', new = 'running')
2026-02-11 03:19:45 (3060): Status Report: Elapsed Time: '6000.000000'
2026-02-11 03:19:45 (3060): Status Report: CPU Time: '39658.109375'
2026-02-11 04:39:49 (3060): VM state change detected. (old = 'running', new = 'paused')
2026-02-11 04:40:07 (3060): VM state change detected. (old = 'paused', new = 'running')
2026-02-11 05:00:13 (3060): Status Report: Elapsed Time: '12000.000000'
2026-02-11 05:00:13 (3060): Status Report: CPU Time: '69547.937500'
2026-02-11 06:28:49 (3060): Guest Log:  *** Job finished ***
2026-02-11 06:28:49 (3060): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-11 06:28:49 (3060): Guest Log: 2026-02-11 14:28:02,476 | INFO     | all workflow threads have been joined
2026-02-11 06:28:49 (3060): Guest Log: 2026-02-11 14:28:02,476 | INFO     | end of generic workflow (traces error code: 0)
2026-02-11 06:28:49 (3060): Guest Log: 2026-02-11 14:28:02,476 | INFO     | traces error code: 0
2026-02-11 06:28:49 (3060): Guest Log: 2026-02-11 14:28:02,476 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-11 06:28:49 (3060): Guest Log: 2026-02-11 14:28:15,967 | INFO     | PID=6102 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-02-11 06:28:49 (3060): Guest Log: 2026-02-11 14:28:15,968 | INFO     | found 0 job(s) in 20 queues
2026-02-11 06:28:49 (3060): Guest Log: 2026-02-11 14:28:15,968 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-11 06:28:49 (3060): Guest Log: 2026-02-11 14:28:15,968 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-11 06:28:49 (3060): Guest Log: 2026-02-11 14:28:15,969 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-11 06:28:49 (3060): Guest Log: 2026-02-11 14:28:15,969 | INFO     | [monitor] control thread has ended
2026-02-11 06:28:49 (3060): Guest Log: 2026-02-11 14:28:16,082 [wrapper] ==== pilot stdout END ====
2026-02-11 06:28:49 (3060): Guest Log: 2026-02-11 14:28:16,087 [wrapper] ==== wrapper stdout RESUME ====
2026-02-11 06:28:49 (3060): Guest Log: 2026-02-11 14:28:16,092 [wrapper] pilotpid: 6102
2026-02-11 06:28:49 (3060): Guest Log: 2026-02-11 14:28:16,096 [wrapper] Pilot exit status: 0
2026-02-11 06:28:49 (3060): Guest Log: 2026-02-11 14:28:16,420 [wrapper] pandaids: 7010071009
2026-02-11 06:28:49 (3060): Guest Log: 2026-02-11 14:28:16,459 [wrapper] cleanup supervisor_pilot 29565 6103
2026-02-11 06:28:49 (3060): Guest Log: 2026-02-11 14:28:16,471 [wrapper] Test setup, not cleaning
2026-02-11 06:28:49 (3060): Guest Log: 2026-02-11 14:28:16,477 [wrapper] apfmon messages muted
2026-02-11 06:28:49 (3060): Guest Log: 2026-02-11 14:28:16,482 [wrapper] ==== wrapper stdout END ====
2026-02-11 06:28:49 (3060): Guest Log: 2026-02-11 14:28:16,487 [wrapper] ==== wrapper stderr END ====
2026-02-11 06:28:49 (3060): Guest Log:  *** Error codes and diagnostics ***
2026-02-11 06:28:49 (3060): Guest Log:     "exeErrorCode": 0,
2026-02-11 06:28:49 (3060): Guest Log:     "exeErrorDiag": "",
2026-02-11 06:28:49 (3060): Guest Log:     "pilotErrorCode": 0,
2026-02-11 06:28:49 (3060): Guest Log:     "pilotErrorDiag": "",
2026-02-11 06:28:49 (3060): Guest Log:  *** Listing of results directory ***
2026-02-11 06:28:49 (3060): Guest Log: total 281824
2026-02-11 06:28:49 (3060): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb 10 07:15 pilot3.tar.gz
2026-02-11 06:28:49 (3060): Guest Log: -rwx------. 1 atlas atlas     36322 Feb 10 07:16 runpilot2-wrapper.sh
2026-02-11 06:28:49 (3060): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb 10 07:18 queuedata.json
2026-02-11 06:28:49 (3060): Guest Log: -rwxr-xr-x. 1 atlas atlas      8759 Feb 11 09:39 init_data.xml
2026-02-11 06:28:49 (3060): Guest Log: -rwxr-xr-x. 1 atlas atlas    597963 Feb 11 09:39 input.tar.gz
2026-02-11 06:28:49 (3060): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb 11 09:39 start_atlas.sh
2026-02-11 06:28:49 (3060): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 11 09:39 EVNT.48431094._000511.pool.root.1 -> /data/./ATLAS.root_0
2026-02-11 06:28:49 (3060): Guest Log: -rw-r--r--. 1 atlas atlas      2555 Feb 11 09:40 pandaJob.out
2026-02-11 06:28:49 (3060): Guest Log: -rw-------. 1 atlas atlas   1009657 Feb 11 09:42 agis_schedconf.cvmfs.json
2026-02-11 06:28:49 (3060): Guest Log: -rw-------. 1 atlas atlas       426 Feb 11 09:42 workernode_map.json
2026-02-11 06:28:49 (3060): Guest Log: drwx------. 5 atlas atlas      4096 Feb 11 09:42 pilot3
2026-02-11 06:28:49 (3060): Guest Log: -rw-------. 1 atlas atlas 279077266 Feb 11 14:26 HITS.48431096._023354.pool.root.1
2026-02-11 06:28:49 (3060): Guest Log: -rw-------. 1 atlas atlas      1035 Feb 11 14:27 memory_monitor_summary.json
2026-02-11 06:28:49 (3060): Guest Log: -rw-------. 1 atlas atlas        95 Feb 11 14:27 pilot_heartbeat.json
2026-02-11 06:28:49 (3060): Guest Log: -rw-------. 1 atlas atlas   1512955 Feb 11 14:27 agis_ddmendpoints.agis.ALL.json
2026-02-11 06:28:49 (3060): Guest Log: -rw-------. 1 atlas atlas    500335 Feb 11 14:27 log.48431096._023354.job.log.tgz.1
2026-02-11 06:28:49 (3060): Guest Log: -rw-------. 1 atlas atlas      6388 Feb 11 14:27 heartbeat.json
2026-02-11 06:28:49 (3060): Guest Log: -rw-------. 1 atlas atlas       744 Feb 11 14:28 pilotlog.txt
2026-02-11 06:28:49 (3060): Guest Log: -rw-------. 1 atlas atlas   2320974 Feb 11 14:28 log.48431096._023354.job.log.1
2026-02-11 06:28:49 (3060): Guest Log: -rw-------. 1 atlas atlas       357 Feb 11 14:28 output.list
2026-02-11 06:28:49 (3060): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 11 14:28 runtime_log
2026-02-11 06:28:49 (3060): Guest Log: -rw-------. 1 atlas atlas   2836480 Feb 11 14:28 result.tar.gz
2026-02-11 06:28:49 (3060): Guest Log: -rw-------. 1 atlas atlas       663 Feb 11 14:28 uqpMDmZAx98n9Rq4apOajLDm4fhM0noT9bVooX4SDm2wgKDmFJvHjm.diag
2026-02-11 06:28:49 (3060): Guest Log: -rw-r--r--. 1 atlas atlas      8761 Feb 11 14:28 runtime_log.err
2026-02-11 06:28:49 (3060): Guest Log: Looking for outputfile HITS.48431096._023354.pool.root.1
2026-02-11 06:28:49 (3060): Guest Log: HITS file was successfully produced
2026-02-11 06:28:49 (3060): Guest Log: -rw-------. 1 atlas atlas 279077266 Feb 11 14:26 /home/atlas/RunAtlas/HITS.48431096._023354.pool.root.1
2026-02-11 06:28:50 (3060): Guest Log: Successfully finished the ATLAS job!
2026-02-11 06:28:50 (3060): Guest Log: Copying the results back to the shared directory!
2026-02-11 06:28:51 (3060): Guest Log:  *** Contents of shared directory: ***
2026-02-11 06:28:51 (3060): Guest Log: total 945780
2026-02-11 06:28:51 (3060): Guest Log: -rwxrwxrwx. 1 root root 685929308 Feb 11 09:39 ATLAS.root_0
2026-02-11 06:28:51 (3060): Guest Log: -rwxrwxrwx. 1 root root 279077266 Feb 11  2026 HITS.pool.root.1
2026-02-11 06:28:51 (3060): Guest Log: -rwxrwxrwx. 1 root root      8759 Feb 11 09:39 init_data.xml
2026-02-11 06:28:51 (3060): Guest Log: -rwxrwxrwx. 1 root root    597963 Feb 10 12:59 input.tar.gz
2026-02-11 06:28:51 (3060): Guest Log: -rwxrwxrwx. 1 root root   2836480 Feb 11  2026 result.tar.gz
2026-02-11 06:28:51 (3060): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb 10 12:59 start_atlas.sh
2026-02-11 06:28:51 (3060): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-11 06:28:51 (3060): VM Completion File Detected.
2026-02-11 06:28:51 (3060): Powering off VM.
2026-02-11 06:28:52 (3060): Successfully stopped VM.
2026-02-11 06:28:52 (3060): Deregistering VM. (boinc_3c6328599909f23c, slot#1)
2026-02-11 06:28:52 (3060): Removing network bandwidth throttle group from VM.
2026-02-11 06:28:52 (3060): Removing VM from VirtualBox.
2026-02-11 06:28:58 (3060): called boinc_finish(0)

</stderr_txt>
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