Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:55:48 (1637): wrapper (7.7.26015): starting
22:55:48 (1637): wrapper: running run_atlas (--nthreads 8)
[2026-02-10 22:55:48] Arguments: --nthreads 8
[2026-02-10 22:55:48] Threads: 8
[2026-02-10 22:55:48] Checking for CVMFS
[2026-02-10 22:55:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 22:55:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 22:55:52] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 22:55:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 22:55:54] 2.11.2.0 15872 46185 107964 156089 2 195 19019855 25165824 4776 130560 0 15951999 99.859 10284281 3104 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-10 22:55:54] CVMFS is ok
[2026-02-10 22:55:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 22:55:54] Checking for apptainer binary...
[2026-02-10 22:55:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 22:55:54] Running /usr/bin/apptainer --version
[2026-02-10 22:55:54] apptainer version 1.3.2-1.el7
[2026-02-10 22:55:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 22:56:08] cg-vwn496.simple-grid.lan
[2026-02-10 22:56:08] apptainer works
[2026-02-10 22:56:08] Set ATHENA_PROC_NUMBER=8
[2026-02-10 22:56:08] Set ATHENA_CORE_NUMBER=8
[2026-02-10 22:56:08] Starting ATLAS job with PandaID=7007439985
[2026-02-10 22:56:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-11 03:07:53]  *** The last 200 lines of the pilot log: ***
[2026-02-11 03:07:53] 2026-02-11 02:06:45,338 | INFO     | job 7007439985 has finished - writing final server update
[2026-02-11 03:07:53] 2026-02-11 02:06:45,338 | INFO     | total number of processed events: 400 (read)
[2026-02-11 03:07:53] 2026-02-11 02:06:45,340 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-7007439985/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 03:07:53] 2026-02-11 02:06:45,341 | INFO     | extracted standard info from prmon json
[2026-02-11 03:07:53] 2026-02-11 02:06:45,341 | INFO     | extracted standard memory fields from prmon json
[2026-02-11 03:07:53] 2026-02-11 02:06:45,341 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-11 03:07:53] 2026-02-11 02:06:45,341 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-11 03:07:53] 2026-02-11 02:06:45,341 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-11 03:07:53] 2026-02-11 02:06:45,346 | INFO     | fitting pss+swap vs Time
[2026-02-11 03:07:53] 2026-02-11 02:06:45,347 | INFO     | sum of square deviations: 4180243959.5
[2026-02-11 03:07:53] 2026-02-11 02:06:45,349 | INFO     | sum of deviations: 98808183995.0
[2026-02-11 03:07:53] 2026-02-11 02:06:45,349 | INFO     | mean x: 1770768356.5
[2026-02-11 03:07:53] 2026-02-11 02:06:45,349 | INFO     | mean y: 2426904.4033613447
[2026-02-11 03:07:53] 2026-02-11 02:06:45,349 | INFO     | intersect: -41853122024.49301
[2026-02-11 03:07:53] 2026-02-11 02:06:45,349 | INFO     | chi2: 6.164768369153938
[2026-02-11 03:07:53] 2026-02-11 02:06:45,350 | INFO     | sum of square deviations: 3922276332.0
[2026-02-11 03:07:53] 2026-02-11 02:06:45,352 | INFO     | sum of deviations: 112068984914.00002
[2026-02-11 03:07:53] 2026-02-11 02:06:45,352 | INFO     | mean x: 1770768204.0
[2026-02-11 03:07:53] 2026-02-11 02:06:45,352 | INFO     | mean y: 2434585.21888412
[2026-02-11 03:07:53] 2026-02-11 02:06:45,352 | INFO     | intersect: -50592724537.360466
[2026-02-11 03:07:53] 2026-02-11 02:06:45,353 | INFO     | chi2: 5.437649418895813
[2026-02-11 03:07:53] 2026-02-11 02:06:45,353 | INFO     | current chi2=5.437649418895813 (change=11.794748913784677 %)
[2026-02-11 03:07:53] 2026-02-11 02:06:45,353 | INFO     | right removable region: 232
[2026-02-11 03:07:53] 2026-02-11 02:06:45,353 | INFO     | sum of square deviations: 3922276332.0
[2026-02-11 03:07:53] 2026-02-11 02:06:45,355 | INFO     | sum of deviations: 17405049357.999996
[2026-02-11 03:07:53] 2026-02-11 02:06:45,355 | INFO     | mean x: 1770768509.0
[2026-02-11 03:07:53] 2026-02-11 02:06:45,355 | INFO     | mean y: 2474984.819742489
[2026-02-11 03:07:53] 2026-02-11 02:06:45,355 | INFO     | intersect: -7855286858.548784
[2026-02-11 03:07:53] 2026-02-11 02:06:45,356 | INFO     | chi2: 1.5256727119626141
[2026-02-11 03:07:53] 2026-02-11 02:06:45,356 | INFO     | current chi2=1.5256727119626141 (change=75.2517431215019 %)
[2026-02-11 03:07:53] 2026-02-11 02:06:45,356 | INFO     | sum of square deviations: 3675146117.0
[2026-02-11 03:07:53] 2026-02-11 02:06:45,358 | INFO     | sum of deviations: -8884627064.0
[2026-02-11 03:07:53] 2026-02-11 02:06:45,358 | INFO     | mean x: 1770768661.5
[2026-02-11 03:07:53] 2026-02-11 02:06:45,358 | INFO     | mean y: 2491061.2719298247
[2026-02-11 03:07:53] 2026-02-11 02:06:45,358 | INFO     | intersect: 4283305666.5122786
[2026-02-11 03:07:53] 2026-02-11 02:06:45,359 | INFO     | chi2: 0.8182764218439899
[2026-02-11 03:07:53] 2026-02-11 02:06:45,359 | INFO     | current chi2=0.8182764218439899 (change=46.36618880130817 %)
[2026-02-11 03:07:53] 2026-02-11 02:06:45,359 | INFO     | sum of square deviations: 3438620752.0
[2026-02-11 03:07:53] 2026-02-11 02:06:45,361 | INFO     | sum of deviations: -5350092169.000002
[2026-02-11 03:07:53] 2026-02-11 02:06:45,361 | INFO     | mean x: 1770768814.0
[2026-02-11 03:07:53] 2026-02-11 02:06:45,361 | INFO     | mean y: 2488779.856502242
[2026-02-11 03:07:53] 2026-02-11 02:06:45,361 | INFO     | intersect: 2757598182.188993
[2026-02-11 03:07:53] 2026-02-11 02:06:45,362 | INFO     | chi2: 0.7946849918234399
[2026-02-11 03:07:53] 2026-02-11 02:06:45,362 | INFO     | current chi2=0.7946849918234399 (change=2.8830636433818504 %)
[2026-02-11 03:07:53] 2026-02-11 02:06:45,362 | INFO     | left removable region: 30
[2026-02-11 03:07:53] 2026-02-11 02:06:45,362 | INFO     | sum of square deviations: 2555770710.5
[2026-02-11 03:07:53] 2026-02-11 02:06:45,364 | INFO     | sum of deviations: 5244264885.5
[2026-02-11 03:07:53] 2026-02-11 02:06:45,364 | INFO     | mean x: 1770769088.5
[2026-02-11 03:07:53] 2026-02-11 02:06:45,364 | INFO     | mean y: 2501229.074257426
[2026-02-11 03:07:53] 2026-02-11 02:06:45,364 | INFO     | intersect: -3630994574.362916
[2026-02-11 03:07:53] 2026-02-11 02:06:45,365 | INFO     | chi2: 0.0003637101121597067
[2026-02-11 03:07:53] 2026-02-11 02:06:45,365 | INFO     | current memory leak: 2.05 B/s (using 202 data points, chi2=0.00)
[2026-02-11 03:07:53] 2026-02-11 02:06:45,365 | INFO     | could have reported an average CPU frequency of 2249 MHz (12 samples)
[2026-02-11 03:07:53] 2026-02-11 02:06:45,365 | INFO     | ..............................
[2026-02-11 03:07:53] 2026-02-11 02:06:45,366 | INFO     | . Timing measurements:
[2026-02-11 03:07:53] 2026-02-11 02:06:45,366 | INFO     | . get job = 0 s
[2026-02-11 03:07:53] 2026-02-11 02:06:45,366 | INFO     | . initial setup = 106 s
[2026-02-11 03:07:53] 2026-02-11 02:06:45,366 | INFO     | . payload setup = 127 s
[2026-02-11 03:07:53] 2026-02-11 02:06:45,366 | INFO     | . stage-in = 0 s
[2026-02-11 03:07:53] 2026-02-11 02:06:45,366 | INFO     | . payload execution = 14576 s
[2026-02-11 03:07:53] 2026-02-11 02:06:45,366 | INFO     | . stage-out = 3 s
[2026-02-11 03:07:53] 2026-02-11 02:06:45,366 | INFO     | . log creation = 1 s
[2026-02-11 03:07:53] 2026-02-11 02:06:45,366 | INFO     | ..............................
[2026-02-11 03:07:53] 2026-02-11 02:06:45,480 | INFO     | 
[2026-02-11 03:07:53] 2026-02-11 02:06:45,480 | INFO     | job summary report
[2026-02-11 03:07:53] 2026-02-11 02:06:45,481 | INFO     | --------------------------------------------------
[2026-02-11 03:07:53] 2026-02-11 02:06:45,481 | INFO     | PanDA job id: 7007439985
[2026-02-11 03:07:53] 2026-02-11 02:06:45,481 | INFO     | task id: 48318042
[2026-02-11 03:07:53] 2026-02-11 02:06:45,481 | INFO     | errors: (none)
[2026-02-11 03:07:53] 2026-02-11 02:06:45,481 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-11 03:07:53] 2026-02-11 02:06:45,481 | INFO     | pilot state: finished 
[2026-02-11 03:07:53] 2026-02-11 02:06:45,481 | INFO     | transexitcode: 0
[2026-02-11 03:07:53] 2026-02-11 02:06:45,481 | INFO     | exeerrorcode: 0
[2026-02-11 03:07:53] 2026-02-11 02:06:45,481 | INFO     | exeerrordiag: 
[2026-02-11 03:07:53] 2026-02-11 02:06:45,481 | INFO     | exitcode: 0
[2026-02-11 03:07:53] 2026-02-11 02:06:45,482 | INFO     | exitmsg: OK
[2026-02-11 03:07:53] 2026-02-11 02:06:45,482 | INFO     | cpuconsumptiontime: 56371 s
[2026-02-11 03:07:53] 2026-02-11 02:06:45,482 | INFO     | nevents: 400
[2026-02-11 03:07:53] 2026-02-11 02:06:45,482 | INFO     | neventsw: 0
[2026-02-11 03:07:53] 2026-02-11 02:06:45,482 | INFO     | pid: 10291
[2026-02-11 03:07:53] 2026-02-11 02:06:45,482 | INFO     | pgrp: 10291
[2026-02-11 03:07:53] 2026-02-11 02:06:45,482 | INFO     | corecount: 8
[2026-02-11 03:07:53] 2026-02-11 02:06:45,482 | INFO     | event service: False
[2026-02-11 03:07:53] 2026-02-11 02:06:45,482 | INFO     | sizes: {0: 2281143, 1: 2281829, 2: 2282290, 13: 2282290, 14707: 2313075, 14711: 2322075, 14713: 2322259, 14714: 2322453}
[2026-02-11 03:07:53] 2026-02-11 02:06:45,482 | INFO     | --------------------------------------------------
[2026-02-11 03:07:53] 2026-02-11 02:06:45,482 | INFO     | 
[2026-02-11 03:07:53] 2026-02-11 02:06:45,483 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-02-11 03:07:53] 2026-02-11 02:06:45,909 | INFO     | time since job start (14727s) is within the limit (349056.0s)
[2026-02-11 03:07:53] 2026-02-11 02:06:45,978 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-11 03:07:53] 2026-02-11 02:06:45,978 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-11 03:07:53] 2026-02-11 02:06:45,978 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-11 03:07:53] 2026-02-11 02:06:45,978 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-11 03:07:53] 2026-02-11 02:06:45,978 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-11 03:07:53] 2026-02-11 02:06:45,979 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-11 03:07:53] 2026-02-11 02:06:45,979 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-11 03:07:53] 2026-02-11 02:06:45,979 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-11 03:07:53] 2026-02-11 02:06:45,979 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-11 03:07:53] 2026-02-11 02:06:45,979 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-11 03:07:53] 2026-02-11 02:06:45,979 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-11 03:07:53] 2026-02-11 02:06:45,979 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-11 03:07:53] 2026-02-11 02:06:45,979 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-11 03:07:53] 2026-02-11 02:06:45,979 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-11 03:07:53] 2026-02-11 02:06:45,979 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-11 03:07:53] 2026-02-11 02:06:45,980 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-11 03:07:53] 2026-02-11 02:06:45,980 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-11 03:07:53] 2026-02-11 02:06:45,980 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-11 03:07:53] 2026-02-11 02:06:45,980 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-11 03:07:53] 2026-02-11 02:06:45,980 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-11 03:07:53] 2026-02-11 02:06:45,980 | INFO     | job 7007439985 has completed (purged errors)
[2026-02-11 03:07:53] 2026-02-11 02:06:45,980 | INFO     | overall cleanup function is called
[2026-02-11 03:07:53] 2026-02-11 02:06:46,989 | INFO     | --- collectZombieJob: --- 10, [10291]
[2026-02-11 03:07:53] 2026-02-11 02:06:46,989 | INFO     | zombie collector waiting for pid 10291
[2026-02-11 03:07:53] 2026-02-11 02:06:46,989 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-11 03:07:53] 2026-02-11 02:06:46,989 | INFO     | collected zombie processes
[2026-02-11 03:07:53] 2026-02-11 02:06:46,989 | INFO     | will attempt to kill all subprocesses of pid=10291
[2026-02-11 03:07:53] 2026-02-11 02:06:47,097 | INFO     | process IDs to be killed: [10291] (in reverse order)
[2026-02-11 03:07:53] 2026-02-11 02:06:47,993 | WARNING  | found no corresponding commands to process id(s)
[2026-02-11 03:07:53] 2026-02-11 02:06:47,993 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-11 03:07:53] 2026-02-11 02:06:47,996 | INFO     | did not find any defunct processes belonging to 10291
[2026-02-11 03:07:53] 2026-02-11 02:06:48,005 | INFO     | did not find any defunct processes belonging to 10291
[2026-02-11 03:07:53] 2026-02-11 02:06:48,005 | INFO     | ready for new job
[2026-02-11 03:07:53] 2026-02-11 02:06:48,005 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-11 03:07:53] 2026-02-11 02:06:48,007 | INFO     | **************************************
[2026-02-11 03:07:53] 2026-02-11 02:06:48,008 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-11 03:07:53] 2026-02-11 02:06:48,008 | INFO     | **************************************
[2026-02-11 03:07:53] 2026-02-11 02:06:48,008 | INFO     | 
[2026-02-11 03:07:53] 2026-02-11 02:06:48,008 | INFO     | pilot is running in a VM
[2026-02-11 03:07:53] 2026-02-11 02:06:48,008 | INFO     | architecture information:
[2026-02-11 03:07:53] 2026-02-11 02:06:48,016 | INFO     | executing command: cat /etc/os-release
[2026-02-11 03:07:53] 2026-02-11 02:06:48,237 | INFO     | cat /etc/os-release:
[2026-02-11 03:07:53] NAME="CentOS Linux"
[2026-02-11 03:07:53] VERSION="7 (Core)"
[2026-02-11 03:07:53] ID="centos"
[2026-02-11 03:07:53] ID_LIKE="rhel fedora"
[2026-02-11 03:07:53] VERSION_ID="7"
[2026-02-11 03:07:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-11 03:07:53] ANSI_COLOR="0;31"
[2026-02-11 03:07:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-11 03:07:53] HOME_URL="https://www.centos.org/"
[2026-02-11 03:07:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-11 03:07:53] 
[2026-02-11 03:07:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-11 03:07:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-11 03:07:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-11 03:07:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-11 03:07:53] 
[2026-02-11 03:07:53] 2026-02-11 02:06:48,237 | INFO     | **************************************
[2026-02-11 03:07:53] 2026-02-11 02:06:48,741 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-02-11 03:07:53] 2026-02-11 02:06:48,976 | INFO     | sufficient remaining disk space (496382246912 B)
[2026-02-11 03:07:53] 2026-02-11 02:06:48,976 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-11 03:07:53] 2026-02-11 02:06:48,977 | INFO     | current server update state: UPDATING_FINAL
[2026-02-11 03:07:53] 2026-02-11 02:06:48,977 | INFO     | update_server=False
[2026-02-11 03:07:53] 2026-02-11 02:06:48,977 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-11 03:07:53] 2026-02-11 02:06:48,978 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-11 03:07:53] 2026-02-11 02:06:48,978 | INFO     | aborting loop
[2026-02-11 03:07:53] 2026-02-11 02:06:49,549 | INFO     | all data control threads have been joined
[2026-02-11 03:07:53] 2026-02-11 02:06:49,694 | INFO     | all payload control threads have been joined
[2026-02-11 03:07:53] 2026-02-11 02:06:49,972 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-11 03:07:53] 2026-02-11 02:06:49,983 | INFO     | [job] retrieve thread has finished
[2026-02-11 03:07:53] 2026-02-11 02:06:49,984 | INFO     | [job] job monitor thread has finished
[2026-02-11 03:07:53] 2026-02-11 02:06:50,093 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-11 03:07:53] 2026-02-11 02:06:50,240 | INFO     | [payload] validate_pre thread has finished
[2026-02-11 03:07:53] 2026-02-11 02:06:50,413 | INFO     | [job] create_data_payload thread has finished
[2026-02-11 03:07:53] 2026-02-11 02:06:50,503 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-11 03:07:53] 2026-02-11 02:06:50,556 | INFO     | [data] control thread has finished
[2026-02-11 03:07:53] 2026-02-11 02:06:50,580 | INFO     | [payload] validate_post thread has finished
[2026-02-11 03:07:53] 2026-02-11 02:06:50,584 | INFO     | [data] copytool_in thread has finished
[2026-02-11 03:07:53] 2026-02-11 02:06:50,619 | INFO     | all job control threads have been joined
[2026-02-11 03:07:53] 2026-02-11 02:06:50,700 | INFO     | [payload] control thread has finished
[2026-02-11 03:07:53] 2026-02-11 02:06:50,855 | INFO     | [payload] failed_post thread has finished
[2026-02-11 03:07:53] 2026-02-11 02:06:50,894 | INFO     | [job] validate thread has finished
[2026-02-11 03:07:53] 2026-02-11 02:06:51,291 | INFO     | [payload] execute_payloads thread has finished
[2026-02-11 03:07:53] 2026-02-11 02:06:51,445 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-11 03:07:53] 2026-02-11 02:06:51,509 | INFO     | [job] queue monitor thread has finished
[2026-02-11 03:07:53] 2026-02-11 02:06:51,625 | INFO     | [job] control thread has finished
[2026-02-11 03:07:53] 2026-02-11 02:06:51,978 | INFO     | [data] copytool_out thread has finished
[2026-02-11 03:07:53] 2026-02-11 02:06:54,103 | INFO     | [data] queue_monitor thread has finished
[2026-02-11 03:07:53] 2026-02-11 02:07:19,093 | INFO     | PID=5740 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-11 03:07:53] 2026-02-11 02:07:19,094 | INFO     | .. there are 9 such processes running
[2026-02-11 03:07:53] 2026-02-11 02:07:19,095 | INFO     | found 0 job(s) in 20 queues
[2026-02-11 03:07:53] 2026-02-11 02:07:19,095 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-11 03:07:53] 2026-02-11 02:07:19,095 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-11 03:07:53] 2026-02-11 02:07:43,077 | INFO     | [monitor] cgroup control has ended
[2026-02-11 03:07:53] 2026-02-11 02:07:44,214 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140518087022400)>', '<ExcThread(monitor, started 140517572605696)>']
[2026-02-11 03:07:53] 2026-02-11 02:07:44,241 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-11 03:07:53] 2026-02-11 02:07:44,241 | INFO     | [monitor] control thread has ended
[2026-02-11 03:07:53] 2026-02-11 02:07:49,240 | INFO     | all workflow threads have been joined
[2026-02-11 03:07:53] 2026-02-11 02:07:49,240 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-11 03:07:53] 2026-02-11 02:07:49,240 | INFO     | traces error code: 0
[2026-02-11 03:07:53] 2026-02-11 02:07:49,240 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-11 03:07:53] 2026-02-11 02:07:49,602 [wrapper] ==== pilot stdout END ====
[2026-02-11 03:07:53] 2026-02-11 02:07:49,663 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-11 03:07:53] 2026-02-11 02:07:49,748 [wrapper] pilotpid: 5740
[2026-02-11 03:07:53] 2026-02-11 02:07:49,804 [wrapper] Pilot exit status: 0
[2026-02-11 03:07:53] 2026-02-11 02:07:50,308 [wrapper] pandaids: 7007439985
[2026-02-11 03:07:53] 2026-02-11 02:07:50,882 [wrapper] cleanup supervisor_pilot 18845 5741
[2026-02-11 03:07:53] 2026-02-11 02:07:50,949 [wrapper] Test setup, not cleaning
[2026-02-11 03:07:53] 2026-02-11 02:07:50,991 [wrapper] apfmon messages muted
[2026-02-11 03:07:53] 2026-02-11 02:07:51,039 [wrapper] ==== wrapper stdout END ====
[2026-02-11 03:07:53] 2026-02-11 02:07:51,122 [wrapper] ==== wrapper stderr END ====
[2026-02-11 03:07:53]  *** Error codes and diagnostics ***
[2026-02-11 03:07:53]     "exeErrorCode": 0,
[2026-02-11 03:07:53]     "exeErrorDiag": "",
[2026-02-11 03:07:53]     "pilotErrorCode": 0,
[2026-02-11 03:07:53]     "pilotErrorDiag": "",
[2026-02-11 03:07:53]  *** Listing of results directory ***
[2026-02-11 03:07:53] total 678836
[2026-02-11 03:07:53] -rwx------. 1 boinc boinc     36322 Feb 10 06:23 runpilot2-wrapper.sh
[2026-02-11 03:07:53] -rw-r--r--. 1 boinc boinc    584627 Feb 10 06:25 pilot3.tar.gz
[2026-02-11 03:07:53] -rw-r--r--. 1 boinc boinc      5111 Feb 10 06:28 queuedata.json
[2026-02-11 03:07:53] -rw-r--r--. 1 boinc boinc       100 Feb 10 22:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-11 03:07:53] -rwxr-xr-x. 1 boinc boinc      7986 Feb 10 22:55 run_atlas
[2026-02-11 03:07:53] -rw-r--r--. 1 boinc boinc       105 Feb 10 22:55 job.xml
[2026-02-11 03:07:53] -rw-r--r--. 1 boinc boinc      6392 Feb 10 22:55 init_data.xml
[2026-02-11 03:07:53] -rw-r--r--. 2 boinc boinc 500604191 Feb 10 22:55 EVNT.48318040._000279.pool.root.1
[2026-02-11 03:07:53] -rw-r--r--. 2 boinc boinc     15845 Feb 10 22:55 start_atlas.sh
[2026-02-11 03:07:53] drwxrwx--x. 2 boinc boinc        68 Feb 10 22:55 shared
[2026-02-11 03:07:53] -rw-r--r--. 2 boinc boinc    597955 Feb 10 22:55 input.tar.gz
[2026-02-11 03:07:53] -rw-r--r--. 1 boinc boinc         0 Feb 10 22:55 boinc_lockfile
[2026-02-11 03:07:53] -rw-r--r--. 1 boinc boinc      2537 Feb 10 22:56 pandaJob.out
[2026-02-11 03:07:53] -rw-------. 1 boinc boinc       415 Feb 10 23:01 workernode_map.json
[2026-02-11 03:07:53] -rw-------. 1 boinc boinc   1009534 Feb 10 23:01 agis_schedconf.cvmfs.json
[2026-02-11 03:07:53] drwx------. 5 boinc boinc      4096 Feb 10 23:01 pilot3
[2026-02-11 03:07:53] -rw-------. 1 boinc boinc 185556385 Feb 11 03:05 HITS.48318042._014683.pool.root.1
[2026-02-11 03:07:53] -rw-r--r--. 1 boinc boinc       531 Feb 11 03:05 boinc_task_state.xml
[2026-02-11 03:07:53] -rw-------. 1 boinc boinc      1012 Feb 11 03:06 memory_monitor_summary.json
[2026-02-11 03:07:53] -rw-------. 1 boinc boinc   1512955 Feb 11 03:06 agis_ddmendpoints.agis.ALL.json
[2026-02-11 03:07:53] -rw-------. 1 boinc boinc    458689 Feb 11 03:06 log.48318042._014683.job.log.tgz.1
[2026-02-11 03:07:53] -rw-------. 1 boinc boinc      6317 Feb 11 03:06 heartbeat.json
[2026-02-11 03:07:53] -rw-------. 1 boinc boinc        95 Feb 11 03:07 pilot_heartbeat.json
[2026-02-11 03:07:53] -rw-r--r--. 1 boinc boinc      8192 Feb 11 03:07 boinc_mmap_file
[2026-02-11 03:07:53] -rw-r--r--. 1 boinc boinc        28 Feb 11 03:07 wrapper_checkpoint.txt
[2026-02-11 03:07:53] -rw-------. 1 boinc boinc      4880 Feb 11 03:07 pilotlog.txt
[2026-02-11 03:07:53] -rw-------. 1 boinc boinc   2066990 Feb 11 03:07 log.48318042._014683.job.log.1
[2026-02-11 03:07:53] -rw-------. 1 boinc boinc       357 Feb 11 03:07 output.list
[2026-02-11 03:07:53] -rw-r--r--. 1 boinc boinc       620 Feb 11 03:07 runtime_log
[2026-02-11 03:07:53] -rw-------. 1 boinc boinc   2539520 Feb 11 03:07 result.tar.gz
[2026-02-11 03:07:53] -rw-r--r--. 1 boinc boinc      8832 Feb 11 03:07 runtime_log.err
[2026-02-11 03:07:53] -rw-------. 1 boinc boinc       656 Feb 11 03:07 OK9MDmXOv98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmaehKDmlekCHo.diag
[2026-02-11 03:07:53] -rw-r--r--. 1 boinc boinc     20726 Feb 11 03:07 stderr.txt
[2026-02-11 03:07:54] HITS file was successfully produced:
[2026-02-11 03:07:54] -rw-------. 1 boinc boinc 185556385 Feb 11 03:05 shared/HITS.pool.root.1
[2026-02-11 03:07:54]  *** Contents of shared directory: ***
[2026-02-11 03:07:54] total 673160
[2026-02-11 03:07:54] -rw-r--r--. 2 boinc boinc 500604191 Feb 10 22:55 ATLAS.root_0
[2026-02-11 03:07:54] -rw-r--r--. 2 boinc boinc     15845 Feb 10 22:55 start_atlas.sh
[2026-02-11 03:07:54] -rw-r--r--. 2 boinc boinc    597955 Feb 10 22:55 input.tar.gz
[2026-02-11 03:07:54] -rw-------. 1 boinc boinc 185556385 Feb 11 03:05 HITS.pool.root.1
[2026-02-11 03:07:54] -rw-------. 1 boinc boinc   2539520 Feb 11 03:07 result.tar.gz
03:07:55 (1637): run_atlas exited; CPU time 56586.678226
03:07:55 (1637): called boinc_finish(0)

</stderr_txt>
]]>

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