Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:22:14 (2979532): wrapper (7.7.26015): starting
07:22:14 (2979532): wrapper: running run_atlas (--nthreads 8)
[2026-02-10 07:22:14] Arguments: --nthreads 8
[2026-02-10 07:22:14] Threads: 8
[2026-02-10 07:22:14] Checking for CVMFS
[2026-02-10 07:22:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 07:22:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 07:22:15] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 07:22:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 07:22:17] 2.13.3.0 7489 139483 402876 156085 0 754 32806035 32935937 18078 16776704 0 634459804 99.556 760566981 39958 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-10 07:22:17] CVMFS is ok
[2026-02-10 07:22:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-10 07:22:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-10 07:22:17] Further information can be found at the LHC@home message board.
[2026-02-10 07:22:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 07:22:17] Checking for apptainer binary...
[2026-02-10 07:22:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 07:22:17] Running /usr/bin/apptainer --version
[2026-02-10 07:22:17] apptainer version 1.4.5-2.el9
[2026-02-10 07:22:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 07:22:18] c7-13-32.aglt2.org
[2026-02-10 07:22:18] apptainer works
[2026-02-10 07:22:18] Set ATHENA_PROC_NUMBER=8
[2026-02-10 07:22:18] Set ATHENA_CORE_NUMBER=8
[2026-02-10 07:22:18] Starting ATLAS job with PandaID=7006749036
[2026-02-10 07:22:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
10:09:05 (3589698): wrapper (7.7.26015): starting
10:09:05 (3589698): wrapper: running run_atlas (--nthreads 11)
[2026-02-10 10:09:05] Arguments: --nthreads 11
[2026-02-10 10:09:05] Threads: 11
[2026-02-10 10:09:05] This job has been restarted, cleaning up previous attempt
[2026-02-10 10:09:05] Checking for CVMFS
[2026-02-10 10:09:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 10:09:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 10:09:05] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 10:09:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 10:09:05] 2.13.3.0 7489 139650 400640 156085 1 776 18913082 32935937 15274 16776704 0 635121080 99.556 761119685 39956 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-10 10:09:05] CVMFS is ok
[2026-02-10 10:09:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-10 10:09:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-10 10:09:05] Further information can be found at the LHC@home message board.
[2026-02-10 10:09:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 10:09:05] Checking for apptainer binary...
[2026-02-10 10:09:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 10:09:05] Running /usr/bin/apptainer --version
[2026-02-10 10:09:06] apptainer version 1.4.5-2.el9
[2026-02-10 10:09:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 10:09:06] c7-13-32.aglt2.org
[2026-02-10 10:09:06] apptainer works
[2026-02-10 10:09:06] Set ATHENA_PROC_NUMBER=11
[2026-02-10 10:09:06] Set ATHENA_CORE_NUMBER=11
[2026-02-10 10:09:06] Starting ATLAS job with PandaID=7006749036
[2026-02-10 10:09:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-10 13:05:43]  *** The last 200 lines of the pilot log: ***
[2026-02-10 13:05:43] 2026-02-10 18:05:06,332 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-10 13:05:43] 2026-02-10 18:05:06,332 | INFO     | log transfer has been attempted: DONE
[2026-02-10 13:05:43] 2026-02-10 18:05:06,332 | INFO     | job 7006749036 has finished - writing final server update
[2026-02-10 13:05:43] 2026-02-10 18:05:06,333 | INFO     | total number of processed events: 400 (read)
[2026-02-10 13:05:43] 2026-02-10 18:05:06,427 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7006749036/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 13:05:43] 2026-02-10 18:05:06,428 | INFO     | extracted standard info from prmon json
[2026-02-10 13:05:43] 2026-02-10 18:05:06,428 | INFO     | extracted standard memory fields from prmon json
[2026-02-10 13:05:43] 2026-02-10 18:05:06,452 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-10 13:05:43] 2026-02-10 18:05:06,452 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-10 13:05:43] 2026-02-10 18:05:06,452 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-10 13:05:43] 2026-02-10 18:05:06,460 | INFO     | fitting pss+swap vs Time
[2026-02-10 13:05:43] 2026-02-10 18:05:06,460 | INFO     | sum of square deviations: 1605439860.023122
[2026-02-10 13:05:43] 2026-02-10 18:05:06,461 | INFO     | sum of deviations: -2861233881.1156006
[2026-02-10 13:05:43] 2026-02-10 18:05:06,461 | INFO     | mean x: 1770741433.0751445
[2026-02-10 13:05:43] 2026-02-10 18:05:06,461 | INFO     | mean y: 2664091.6242774567
[2026-02-10 13:05:43] 2026-02-10 18:05:06,461 | INFO     | intersect: 3158500388.685462
[2026-02-10 13:05:43] 2026-02-10 18:05:06,462 | INFO     | chi2: 1.9643081206758075
[2026-02-10 13:05:43] 2026-02-10 18:05:06,462 | INFO     | sum of square deviations: 1470222684.9940448
[2026-02-10 13:05:43] 2026-02-10 18:05:06,463 | INFO     | sum of deviations: 8957846150.69642
[2026-02-10 13:05:43] 2026-02-10 18:05:06,463 | INFO     | mean x: 1770741280.577381
[2026-02-10 13:05:43] 2026-02-10 18:05:06,463 | INFO     | mean y: 2677113.4464285714
[2026-02-10 13:05:43] 2026-02-10 18:05:06,463 | INFO     | intersect: -10786183734.639038
[2026-02-10 13:05:43] 2026-02-10 18:05:06,463 | INFO     | chi2: 1.2608376322488528
[2026-02-10 13:05:43] 2026-02-10 18:05:06,463 | INFO     | current chi2=1.2608376322488528 (change=35.812634536425485 %)
[2026-02-10 13:05:43] 2026-02-10 18:05:06,464 | INFO     | sum of square deviations: 1342819609.9631865
[2026-02-10 13:05:43] 2026-02-10 18:05:06,464 | INFO     | sum of deviations: 8906686704.447847
[2026-02-10 13:05:43] 2026-02-10 18:05:06,464 | INFO     | mean x: 1770741128.0797546
[2026-02-10 13:05:43] 2026-02-10 18:05:06,465 | INFO     | mean y: 2677052.1963190185
[2026-02-10 13:05:43] 2026-02-10 18:05:06,465 | INFO     | intersect: -11742337948.678823
[2026-02-10 13:05:43] 2026-02-10 18:05:06,465 | INFO     | chi2: 1.2617892120490282
[2026-02-10 13:05:43] 2026-02-10 18:05:06,465 | INFO     | current chi2=1.2617892120490282 (change=-0.07547203349872225 %)
[2026-02-10 13:05:43] 2026-02-10 18:05:06,465 | INFO     | right removable region: 162
[2026-02-10 13:05:43] 2026-02-10 18:05:06,465 | INFO     | sum of square deviations: 1470214754.9940448
[2026-02-10 13:05:43] 2026-02-10 18:05:06,466 | INFO     | sum of deviations: -26653708908.45833
[2026-02-10 13:05:43] 2026-02-10 18:05:06,466 | INFO     | mean x: 1770741585.577381
[2026-02-10 13:05:43] 2026-02-10 18:05:06,466 | INFO     | mean y: 2690531.4583333335
[2026-02-10 13:05:43] 2026-02-10 18:05:06,466 | INFO     | intersect: 32104688293.18848
[2026-02-10 13:05:43] 2026-02-10 18:05:06,466 | INFO     | chi2: 0.7525609258315423
[2026-02-10 13:05:43] 2026-02-10 18:05:06,467 | INFO     | current chi2=0.7525609258315423 (change=61.6882444301748 %)
[2026-02-10 13:05:43] 2026-02-10 18:05:06,467 | INFO     | sum of square deviations: 1342803749.9631865
[2026-02-10 13:05:43] 2026-02-10 18:05:06,467 | INFO     | sum of deviations: -25990805918.368103
[2026-02-10 13:05:43] 2026-02-10 18:05:06,468 | INFO     | mean x: 1770741738.0797546
[2026-02-10 13:05:43] 2026-02-10 18:05:06,468 | INFO     | mean y: 2689730.7975460123
[2026-02-10 13:05:43] 2026-02-10 18:05:06,468 | INFO     | intersect: 34276502897.648212
[2026-02-10 13:05:43] 2026-02-10 18:05:06,468 | INFO     | chi2: 0.7515526485673757
[2026-02-10 13:05:43] 2026-02-10 18:05:06,468 | INFO     | current chi2=0.7515526485673757 (change=0.1339794865183226 %)
[2026-02-10 13:05:43] 2026-02-10 18:05:06,468 | INFO     | left removable region: 20
[2026-02-10 13:05:43] 2026-02-10 18:05:06,468 | INFO     | sum of square deviations: 887776476.3098595
[2026-02-10 13:05:43] 2026-02-10 18:05:06,469 | INFO     | sum of deviations: -11278109090.760557
[2026-02-10 13:05:43] 2026-02-10 18:05:06,469 | INFO     | mean x: 1770741707.5915494
[2026-02-10 13:05:43] 2026-02-10 18:05:06,469 | INFO     | mean y: 2702023.3661971833
[2026-02-10 13:05:43] 2026-02-10 18:05:06,469 | INFO     | intersect: 22497799249.626568
[2026-02-10 13:05:43] 2026-02-10 18:05:06,469 | INFO     | chi2: 0.02753409926726833
[2026-02-10 13:05:43] 2026-02-10 18:05:06,470 | INFO     | current memory leak: -12.70 B/s (using 142 data points, chi2=0.03)
[2026-02-10 13:05:43] 2026-02-10 18:05:06,470 | INFO     | could have reported an average CPU frequency of 3292 MHz (9 samples)
[2026-02-10 13:05:43] 2026-02-10 18:05:06,470 | INFO     | ..............................
[2026-02-10 13:05:43] 2026-02-10 18:05:06,470 | INFO     | . Timing measurements:
[2026-02-10 13:05:43] 2026-02-10 18:05:06,470 | INFO     | . get job = 0 s
[2026-02-10 13:05:43] 2026-02-10 18:05:06,470 | INFO     | . initial setup = 1 s
[2026-02-10 13:05:43] 2026-02-10 18:05:06,470 | INFO     | . payload setup = 8 s
[2026-02-10 13:05:43] 2026-02-10 18:05:06,470 | INFO     | . stage-in = 0 s
[2026-02-10 13:05:43] 2026-02-10 18:05:06,471 | INFO     | . payload execution = 10517 s
[2026-02-10 13:05:43] 2026-02-10 18:05:06,471 | INFO     | . stage-out = 2 s
[2026-02-10 13:05:43] 2026-02-10 18:05:06,471 | INFO     | . log creation = 0 s
[2026-02-10 13:05:43] 2026-02-10 18:05:06,471 | INFO     | ..............................
[2026-02-10 13:05:43] 2026-02-10 18:05:06,543 | INFO     | 
[2026-02-10 13:05:43] 2026-02-10 18:05:06,544 | INFO     | job summary report
[2026-02-10 13:05:43] 2026-02-10 18:05:06,544 | INFO     | --------------------------------------------------
[2026-02-10 13:05:43] 2026-02-10 18:05:06,544 | INFO     | PanDA job id: 7006749036
[2026-02-10 13:05:43] 2026-02-10 18:05:06,544 | INFO     | task id: 48318010
[2026-02-10 13:05:43] 2026-02-10 18:05:06,544 | INFO     | errors: (none)
[2026-02-10 13:05:43] 2026-02-10 18:05:06,544 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-10 13:05:43] 2026-02-10 18:05:06,544 | INFO     | pilot state: finished 
[2026-02-10 13:05:43] 2026-02-10 18:05:06,544 | INFO     | transexitcode: 0
[2026-02-10 13:05:43] 2026-02-10 18:05:06,544 | INFO     | exeerrorcode: 0
[2026-02-10 13:05:43] 2026-02-10 18:05:06,544 | INFO     | exeerrordiag: 
[2026-02-10 13:05:43] 2026-02-10 18:05:06,544 | INFO     | exitcode: 0
[2026-02-10 13:05:43] 2026-02-10 18:05:06,545 | INFO     | exitmsg: OK
[2026-02-10 13:05:43] 2026-02-10 18:05:06,545 | INFO     | cpuconsumptiontime: 32916 s
[2026-02-10 13:05:43] 2026-02-10 18:05:06,545 | INFO     | nevents: 400
[2026-02-10 13:05:43] 2026-02-10 18:05:06,545 | INFO     | neventsw: 0
[2026-02-10 13:05:43] 2026-02-10 18:05:06,545 | INFO     | pid: 3615298
[2026-02-10 13:05:43] 2026-02-10 18:05:06,545 | INFO     | pgrp: 3615298
[2026-02-10 13:05:43] 2026-02-10 18:05:06,545 | INFO     | corecount: 11
[2026-02-10 13:05:43] 2026-02-10 18:05:06,545 | INFO     | event service: False
[2026-02-10 13:05:43] 2026-02-10 18:05:06,545 | INFO     | sizes: {0: 2282225, 11: 2282225, 10529: 2311258, 10530: 2311257, 10534: 2320367, 10537: 2320569}
[2026-02-10 13:05:43] 2026-02-10 18:05:06,545 | INFO     | --------------------------------------------------
[2026-02-10 13:05:43] 2026-02-10 18:05:06,545 | INFO     | 
[2026-02-10 13:05:43] 2026-02-10 18:05:06,545 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-10 13:05:43] 2026-02-10 18:05:06,605 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-10 13:05:43] 2026-02-10 18:05:06,605 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-10 13:05:43] 2026-02-10 18:05:06,605 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-10 13:05:43] 2026-02-10 18:05:06,605 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-10 13:05:43] 2026-02-10 18:05:06,606 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-10 13:05:43] 2026-02-10 18:05:06,606 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-10 13:05:43] 2026-02-10 18:05:06,606 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-10 13:05:43] 2026-02-10 18:05:06,606 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-10 13:05:43] 2026-02-10 18:05:06,606 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-10 13:05:43] 2026-02-10 18:05:06,606 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-10 13:05:43] 2026-02-10 18:05:06,606 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-10 13:05:43] 2026-02-10 18:05:06,606 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-10 13:05:43] 2026-02-10 18:05:06,606 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-10 13:05:43] 2026-02-10 18:05:06,606 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-10 13:05:43] 2026-02-10 18:05:06,607 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-10 13:05:43] 2026-02-10 18:05:06,607 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-10 13:05:43] 2026-02-10 18:05:06,607 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-10 13:05:43] 2026-02-10 18:05:06,607 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-10 13:05:43] 2026-02-10 18:05:06,607 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-10 13:05:43] 2026-02-10 18:05:06,607 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-10 13:05:43] 2026-02-10 18:05:06,607 | INFO     | job 7006749036 has completed (purged errors)
[2026-02-10 13:05:43] 2026-02-10 18:05:06,608 | INFO     | overall cleanup function is called
[2026-02-10 13:05:43] 2026-02-10 18:05:07,618 | INFO     | --- collectZombieJob: --- 10, [3615298]
[2026-02-10 13:05:43] 2026-02-10 18:05:07,618 | INFO     | zombie collector waiting for pid 3615298
[2026-02-10 13:05:43] 2026-02-10 18:05:07,618 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-10 13:05:43] 2026-02-10 18:05:07,618 | INFO     | collected zombie processes
[2026-02-10 13:05:43] 2026-02-10 18:05:07,619 | INFO     | will attempt to kill all subprocesses of pid=3615298
[2026-02-10 13:05:43] 2026-02-10 18:05:09,289 | INFO     | process IDs to be killed: [3615298] (in reverse order)
[2026-02-10 13:05:43] 2026-02-10 18:05:09,457 | WARNING  | found no corresponding commands to process id(s)
[2026-02-10 13:05:43] 2026-02-10 18:05:09,457 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-10 13:05:43] 2026-02-10 18:05:09,480 | INFO     | did not find any defunct processes belonging to 3615298
[2026-02-10 13:05:43] 2026-02-10 18:05:09,499 | INFO     | did not find any defunct processes belonging to 3615298
[2026-02-10 13:05:43] 2026-02-10 18:05:09,499 | INFO     | ready for new job
[2026-02-10 13:05:43] 2026-02-10 18:05:09,499 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-10 13:05:43] 2026-02-10 18:05:09,502 | INFO     | **************************************
[2026-02-10 13:05:43] 2026-02-10 18:05:09,502 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-10 13:05:43] 2026-02-10 18:05:09,502 | INFO     | **************************************
[2026-02-10 13:05:43] 2026-02-10 18:05:09,502 | INFO     | 
[2026-02-10 13:05:43] 2026-02-10 18:05:09,507 | INFO     | architecture information:
[2026-02-10 13:05:43] 2026-02-10 18:05:09,508 | INFO     | executing command: cat /etc/os-release
[2026-02-10 13:05:43] 2026-02-10 18:05:09,530 | INFO     | cat /etc/os-release:
[2026-02-10 13:05:43] NAME="CentOS Linux"
[2026-02-10 13:05:43] VERSION="7 (Core)"
[2026-02-10 13:05:43] ID="centos"
[2026-02-10 13:05:43] ID_LIKE="rhel fedora"
[2026-02-10 13:05:43] VERSION_ID="7"
[2026-02-10 13:05:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-10 13:05:43] ANSI_COLOR="0;31"
[2026-02-10 13:05:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-10 13:05:43] HOME_URL="https://www.centos.org/"
[2026-02-10 13:05:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-10 13:05:43] 
[2026-02-10 13:05:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-10 13:05:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-10 13:05:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-10 13:05:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-10 13:05:43] 
[2026-02-10 13:05:43] 2026-02-10 18:05:09,531 | INFO     | **************************************
[2026-02-10 13:05:43] 2026-02-10 18:05:10,034 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-10 13:05:43] 2026-02-10 18:05:10,081 | INFO     | sufficient remaining disk space (93042245632 B)
[2026-02-10 13:05:43] 2026-02-10 18:05:10,081 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-10 13:05:43] 2026-02-10 18:05:10,081 | INFO     | current server update state: UPDATING_FINAL
[2026-02-10 13:05:43] 2026-02-10 18:05:10,081 | INFO     | update_server=False
[2026-02-10 13:05:43] 2026-02-10 18:05:10,081 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-10 13:05:43] 2026-02-10 18:05:10,085 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-10 13:05:43] 2026-02-10 18:05:10,124 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-10 13:05:43] 2026-02-10 18:05:10,124 | INFO     | aborting loop
[2026-02-10 13:05:43] 2026-02-10 18:05:10,316 | INFO     | all data control threads have been joined
[2026-02-10 13:05:43] 2026-02-10 18:05:10,440 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-10 13:05:43] 2026-02-10 18:05:10,556 | INFO     | all job control threads have been joined
[2026-02-10 13:05:43] 2026-02-10 18:05:10,668 | INFO     | all payload control threads have been joined
[2026-02-10 13:05:43] 2026-02-10 18:05:11,089 | INFO     | [job] retrieve thread has finished
[2026-02-10 13:05:43] 2026-02-10 18:05:11,130 | INFO     | [job] job monitor thread has finished
[2026-02-10 13:05:43] 2026-02-10 18:05:11,322 | INFO     | [data] control thread has finished
[2026-02-10 13:05:43] 2026-02-10 18:05:11,416 | INFO     | [payload] failed_post thread has finished
[2026-02-10 13:05:43] 2026-02-10 18:05:11,477 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-10 13:05:43] 2026-02-10 18:05:11,560 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-10 13:05:43] 2026-02-10 18:05:11,568 | INFO     | [job] control thread has finished
[2026-02-10 13:05:43] 2026-02-10 18:05:11,673 | INFO     | [payload] control thread has finished
[2026-02-10 13:05:43] 2026-02-10 18:05:11,871 | INFO     | [job] validate thread has finished
[2026-02-10 13:05:43] 2026-02-10 18:05:11,918 | INFO     | [payload] validate_post thread has finished
[2026-02-10 13:05:43] 2026-02-10 18:05:11,973 | INFO     | [job] create_data_payload thread has finished
[2026-02-10 13:05:43] 2026-02-10 18:05:12,094 | INFO     | [data] copytool_out thread has finished
[2026-02-10 13:05:43] 2026-02-10 18:05:12,208 | INFO     | [payload] execute_payloads thread has finished
[2026-02-10 13:05:43] 2026-02-10 18:05:12,384 | INFO     | [data] copytool_in thread has finished
[2026-02-10 13:05:43] 2026-02-10 18:05:12,448 | INFO     | [payload] validate_pre thread has finished
[2026-02-10 13:05:43] 2026-02-10 18:05:12,566 | INFO     | [job] queue monitor thread has finished
[2026-02-10 13:05:43] 2026-02-10 18:05:14,451 | INFO     | [data] queue_monitor thread has finished
[2026-02-10 13:05:43] 2026-02-10 18:05:36,863 | INFO     | [monitor] cgroup control has ended
[2026-02-10 13:05:43] 2026-02-10 18:05:37,035 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140633787356992)>', '<ExcThread(monitor, started 140633301825280)>']
[2026-02-10 13:05:43] 2026-02-10 18:05:40,735 | INFO     | PID=3600295 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-10 13:05:43] 2026-02-10 18:05:40,736 | INFO     | .. there are 31 such processes running
[2026-02-10 13:05:43] 2026-02-10 18:05:40,736 | INFO     | found 0 job(s) in 20 queues
[2026-02-10 13:05:43] 2026-02-10 18:05:40,736 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-10 13:05:43] 2026-02-10 18:05:40,736 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-10 13:05:43] 2026-02-10 18:05:40,736 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-10 13:05:43] 2026-02-10 18:05:40,736 | INFO     | [monitor] control thread has ended
[2026-02-10 13:05:43] 2026-02-10 18:05:42,061 | INFO     | all workflow threads have been joined
[2026-02-10 13:05:43] 2026-02-10 18:05:42,061 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-10 13:05:43] 2026-02-10 18:05:42,061 | INFO     | traces error code: 0
[2026-02-10 13:05:43] 2026-02-10 18:05:42,062 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-10 13:05:43] 2026-02-10 18:05:42,373 [wrapper] ==== pilot stdout END ====
[2026-02-10 13:05:43] 2026-02-10 18:05:42,420 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-10 13:05:43] 2026-02-10 18:05:42,462 [wrapper] pilotpid: 3600295
[2026-02-10 13:05:43] 2026-02-10 18:05:42,519 [wrapper] Pilot exit status: 0
[2026-02-10 13:05:43] 2026-02-10 18:05:42,711 [wrapper] pandaids: 7006749036 7006749036
[2026-02-10 13:05:43] 2026-02-10 18:05:43,007 [wrapper] cleanup supervisor_pilot  436735 3600297
[2026-02-10 13:05:43] 2026-02-10 18:05:43,026 [wrapper] Test setup, not cleaning
[2026-02-10 13:05:43] 2026-02-10 18:05:43,039 [wrapper] apfmon messages muted
[2026-02-10 13:05:43] 2026-02-10 18:05:43,042 [wrapper] ==== wrapper stdout END ====
[2026-02-10 13:05:43] 2026-02-10 18:05:43,045 [wrapper] ==== wrapper stderr END ====
[2026-02-10 13:05:43]  *** Error codes and diagnostics ***
[2026-02-10 13:05:43]     "exeErrorCode": 0,
[2026-02-10 13:05:43]     "exeErrorDiag": "",
[2026-02-10 13:05:43]     "pilotErrorCode": 0,
[2026-02-10 13:05:43]     "pilotErrorDiag": "",
[2026-02-10 13:05:43]  *** Listing of results directory ***
[2026-02-10 13:05:43] total 1158064
[2026-02-10 13:05:43] drwx------. 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-02-10 13:05:43] -rw-r--r--. 1 boincer umatlas    584627 Feb  9 10:31 pilot3.tar.gz
[2026-02-10 13:05:43] -rwx------. 1 boincer umatlas     36322 Feb  9 10:32 runpilot2-wrapper.sh
[2026-02-10 13:05:43] -rw-r--r--. 1 boincer umatlas      5111 Feb  9 10:33 queuedata.json
[2026-02-10 13:05:43] -rw-r--r--. 1 boincer umatlas       100 Feb 10 07:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-10 13:05:43] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 10 07:22 run_atlas
[2026-02-10 13:05:43] -rw-r--r--. 1 boincer umatlas       105 Feb 10 07:22 job.xml
[2026-02-10 13:05:43] -rw-r--r--. 3 boincer umatlas 496409900 Feb 10 07:22 EVNT.48318008._000289.pool.root.1
[2026-02-10 13:05:43] -rw-r--r--. 3 boincer umatlas 496409900 Feb 10 07:22 ATLAS.root_0
[2026-02-10 13:05:43] -rw-r--r--. 2 boincer umatlas     15845 Feb 10 07:22 start_atlas.sh
[2026-02-10 13:05:43] drwxrwx--x. 2 boincer umatlas      4096 Feb 10 07:22 shared
[2026-02-10 13:05:43] -rw-r--r--. 2 boincer umatlas    597953 Feb 10 07:22 input.tar.gz
[2026-02-10 13:05:43] -rw-r--r--. 1 boincer umatlas         0 Feb 10 07:22 boinc_lockfile
[2026-02-10 13:05:43] -rw-r--r--. 1 boincer umatlas      2528 Feb 10 10:09 pandaJob.out
[2026-02-10 13:05:43] -rw-------. 1 boincer umatlas        57 Feb 10 10:09 setup.sh.local
[2026-02-10 13:05:43] -rw-------. 1 boincer umatlas   1009464 Feb 10 10:09 agis_schedconf.cvmfs.json
[2026-02-10 13:05:43] -rw-------. 1 boincer umatlas       426 Feb 10 10:09 workernode_map.json
[2026-02-10 13:05:43] -rw-r--r--. 1 boincer umatlas      6903 Feb 10 13:03 init_data.xml
[2026-02-10 13:05:43] -rw-------. 1 boincer umatlas 185376512 Feb 10 13:04 HITS.48318010._015954.pool.root.1
[2026-02-10 13:05:43] -rw-r--r--. 1 boincer umatlas       531 Feb 10 13:04 boinc_task_state.xml
[2026-02-10 13:05:43] -rw-------. 1 boincer umatlas        96 Feb 10 13:04 pilot_heartbeat.json
[2026-02-10 13:05:43] -rw-------. 1 boincer umatlas      1045 Feb 10 13:04 memory_monitor_summary.json
[2026-02-10 13:05:43] -rw-------. 1 boincer umatlas   1512955 Feb 10 13:05 agis_ddmendpoints.agis.ALL.json
[2026-02-10 13:05:43] -rw-------. 1 boincer umatlas    466783 Feb 10 13:05 log.48318010._015954.job.log.tgz.1
[2026-02-10 13:05:43] -rw-------. 1 boincer umatlas      6357 Feb 10 13:05 heartbeat.json
[2026-02-10 13:05:43] -rw-------. 1 boincer umatlas      4820 Feb 10 13:05 pilotlog.txt
[2026-02-10 13:05:43] -rw-r--r--. 1 boincer umatlas      8192 Feb 10 13:05 boinc_mmap_file
[2026-02-10 13:05:43] -rw-r--r--. 1 boincer umatlas        28 Feb 10 13:05 wrapper_checkpoint.txt
[2026-02-10 13:05:43] -rw-------. 1 boincer umatlas   1390983 Feb 10 13:05 log.48318010._015954.job.log.1
[2026-02-10 13:05:43] -rw-------. 1 boincer umatlas       357 Feb 10 13:05 output.list
[2026-02-10 13:05:43] -rw-r--r--. 1 boincer umatlas       620 Feb 10 13:05 runtime_log
[2026-02-10 13:05:43] -rw-------. 1 boincer umatlas   1873920 Feb 10 13:05 result.tar.gz
[2026-02-10 13:05:43] -rw-r--r--. 1 boincer umatlas      9429 Feb 10 13:05 runtime_log.err
[2026-02-10 13:05:43] -rw-------. 1 boincer umatlas       784 Feb 10 13:05 FbPLDmrQi98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmhBgKDmvWG3pn.diag
[2026-02-10 13:05:43] -rw-r--r--. 1 boincer umatlas     20510 Feb 10 13:05 stderr.txt
[2026-02-10 13:05:43] HITS file was successfully produced:
[2026-02-10 13:05:43] -rw-------. 1 boincer umatlas 185376512 Feb 10 13:04 shared/HITS.pool.root.1
[2026-02-10 13:05:43]  *** Contents of shared directory: ***
[2026-02-10 13:05:43] total 668248
[2026-02-10 13:05:43] -rw-r--r--. 3 boincer umatlas 496409900 Feb 10 07:22 ATLAS.root_0
[2026-02-10 13:05:43] -rw-r--r--. 2 boincer umatlas     15845 Feb 10 07:22 start_atlas.sh
[2026-02-10 13:05:43] -rw-r--r--. 2 boincer umatlas    597953 Feb 10 07:22 input.tar.gz
[2026-02-10 13:05:43] -rw-------. 1 boincer umatlas 185376512 Feb 10 13:04 HITS.pool.root.1
[2026-02-10 13:05:43] -rw-------. 1 boincer umatlas   1873920 Feb 10 13:05 result.tar.gz
13:06:04 (3589698): run_atlas exited; CPU time 33200.373828
13:06:04 (3589698): called boinc_finish(0)

</stderr_txt>
]]>

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